RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBRG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154144

Ensembl transcript IDs: ENST00000284290.8, ENST00000438907.3, ENST00000441174.8, ENST00000452080.5, ENST00000473629.6, ENST00000491010.2, ENST00000529543.5, ENST00000530731.5, ENST00000531033.1, ENST00000531667.5

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAATCTACCCGTCCACTCCTCCACTCCCAATACACATACCCCCATaGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCT +
Preference number: 1 (lower is better)
Translates to: SIYPSTPPLPIHIPP*AVLIRGQPEVAKNS
Trigger: AGAGTTCTTGGCTACCTCTGGCTGCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGGGAGTGGAGGAGTGGACGGGTAGATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 90 bp CATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTaGACACATCAAATTTCACCCACTGGTAACTGCAGAATCAAGGGA +
Preference number: 1 (lower is better)
Translates to: HHSPAAPQVAAHLQV*THQISPTGNCRIKG
Trigger: TCCCTTGATTCTGCAGTTACCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530731.5
3UTR CCA 90 bp AGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATaGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: SAAGEYLPRVHVSGT*AGKKTQRLQAEALG
Trigger: TCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR TCA 90 bp TCTCATGCATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATTaGTGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCC +
Preference number: 1 (lower is better)
Translates to: SHASGPIETMNLVTD*CLRKSQSTRPLLHS
Trigger: GGAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 90 bp CATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTaGAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAAC +
Preference number: 1 (lower is better)
Translates to: HSSAYSPEQFCMTSI*RRADNGILGVIFRN
Trigger: GTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR CCA 90 bp CGTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTaGCCCCATAGAAACCATGAACCTTGTAACAGATTGATGCCTGAG +
Preference number: 1 (lower is better)
Translates to: RSVNPYCPCFDLSCI*PHRNHEPCNRLMPE
Trigger: CTCAGGCATCAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR TCA 90 bp CTCAGTTTACAGTGGCCAGTGTGGTGTGCTCTAAACACTGCTGCCTaGTCCCTCCCTCTGCTGGTCAGATTTATTACTATAAAGTACCAA +
Preference number: 1 (lower is better)
Translates to: LSLQWPVWCALNTAA*SLPLLVRFITIKYQ
Trigger: TTGGTACTTTATAGTAATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTGTAAACTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 90 bp GCTTCTCAGTTTACAGTGGCCAGTGTGGTGTGCTCTAAACACTGCTaGCTGATCCCTCCCTCTGCTGGTCAGATTTATTACTATAAAGTA +
Preference number: 1 (lower is better)
Translates to: ASQFTVASVVCSKHC*LIPPSAGQIYYYKV
Trigger: TACTTTATAGTAATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTGTAAACTGAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR TCA 90 bp ATTAAGCAGCAGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTaGATTAGGATCACAATCAAGAGTAGAAGTTTGTCAGAATCTCCC +
Preference number: 1 (lower is better)
Translates to: IKQQPGLQGLGLDIP*IRITIKSRSLSESP
Trigger: GGGAGATTCTGACAAACTTCTACTCTTGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCTGCTGCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR GCA 90 bp TTAGCTTCTCAGTTTACAGTGGCCAGTGTGGTGTGCTCTAAACACTaGTGCCTGATCCCTCCCTCTGCTGGTCAGATTTATTACTATAAA +
Preference number: 1 (lower is better)
Translates to: LASQFTVASVVCSKH*CLIPPSAGQIYYYK
Trigger: TTTATAGTAATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTGTAAACTGAGAAGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 90 bp TCAACTCGTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATaGATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATTGATG +
Preference number: 1 (lower is better)
Translates to: STRSVNPYCPCFDLS*IWPHRNHEPCNRLM
Trigger: CATCAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAACGAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 90 bp CCAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTaGATTAACCATTCAATTCTCACCACTCCATCCCCATTCTTCTAC +
Preference number: 1 (lower is better)
Translates to: PIPFVLSSIGNYEWQ*INHSILTTPSPFFY
Trigger: GTAGAAGAATGGGGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CCA 90 bp AAAGTACCAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATaGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCCCATTC +
Preference number: 1 (lower is better)
Translates to: KVPIPFVLSSIGNYE*QCINHSILTTPSPF
Trigger: GAATGGGGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGGTACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCCTAAACACTGCTGCCTaGTCCCTCCCTCTGCTGGTC +
Preference number: 2 (lower is better)
Translates to: PIHIPPWAVLIRGQPEVALNTAA*SLPLLV
Trigger: GACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAG...GGCTACCTCTGGCTGCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR GCA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 2 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCAGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 2 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR TCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 2 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR TCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAGATCTCCTGACCTCTTaGTCCACCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRDLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCAAGAGGTCAGGAGATC...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGATCTCCTGACCTCTTaGTCCACCCGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: VQLTPIAHALTSHASGPIDLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCAAGAGGTCAGGAGATC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 2 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQEVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCACTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 2 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR CAA 90 bp TCAATTCTCACCACTCCATCCCCATTCTTCTACTTCTGGGTCCTTTaGTCCCTCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: SILTTPSPFFYFWVL*SLPFQTALGNLLLG
Trigger: ACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGAGGGACAAAAGGACCCAGAAGTAGAAGAATGGGGATGGAGTGGTGAGAATTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGGAGGTGATTAGGTCATaGGAGCAGACCTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: LSRQPLVTCCWVTKASHREVIRS*EQTSHE
Trigger: TTCATGAGAGGTCTGCTCTCATGACCTAATCACCTC...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR GCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp ATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 2 (lower is better)
Translates to: IAASFSGSPSGSCPSPGLVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...CAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR TCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATATCCTCTTCTACCACGTaGGGACACTGCAGGAAGACA +
Preference number: 2 (lower is better)
Translates to: VQLTPIAHALTSHASGPISSSTT*GHCRKT
Trigger: TGTCTTCCTGCAGTGTCCTCACGTGGTAGAAGAGGA...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAATGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 2 (lower is better)
Translates to: IESALLELGLPSIQNCEKCRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTCTGGGTTGCAGGGGCTaGGACTTGATATTCCTTGAA +
Preference number: 2 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPLGCRG*DLIFLE
Trigger: TTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAG...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGACTGAGCAGTTCTGCATaGCAAGCATCTGCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRLSSSA*QASAEE
Trigger: CTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAG...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR GCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 2 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTTTACAGTGGCCAGTGTaGTGTGCTCTAAACACTGCT +
Preference number: 2 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPLQWPV*CALNTA
Trigger: AGCAGTGTTTAGAGCACACCACACTGGCCACTGTAA...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 2 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 2 (lower is better)
Translates to: VQLTPIAHALTSHASGPIAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGGTCTGGGCACTTCATaGTGGCATATATTCGAGTAC +
Preference number: 2 (lower is better)
Translates to: VQLTPIAHALTSHASGPIGLGTS*WHIFEY
Trigger: GTACTCGAATATATGCCAGCATGAAGTGCCCAGACC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR CCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATACTGACAATGGCATTCTaGGGGTCATCTTCAGGAACA +
Preference number: 2 (lower is better)
Translates to: VQLTPIAHALTSHASGPILTMAF*GSSSGT
Trigger: TGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR CCA 90 bp AGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATAGATGGTATTGGGAGGTaGGGCCTTTGGGAGGTGATT +
Preference number: 2 (lower is better)
Translates to: RLMPEKKSIYPSTPPLPIDGIGR*GLWEVI
Trigger: AATCACCTCCCAAAGGCCCCACCTCCCAATACCATC...TATTGGGAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CAA 90 bp CTCTCATGCATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATaGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTC +
Preference number: 2 (lower is better)
Translates to: LSCIWPHRNHEPCNR*MPEKKSIYPSTPPL
Trigger: GAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAGTTCAATCTGAAGACTaGATTGGGCTACCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRVQSED*IGLPCD
Trigger: ATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAAC...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR TCA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGATGGTTTCAGTGTACTaGGCTAAAAAGCACATTATC +
Preference number: 2 (lower is better)
Translates to: LSRQPLVTCCWVTKASHRMVSVY*AKKHII
Trigger: GATAATGTGCTTTTTAGCTCAGTACACTGAAACCAT...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGATGGTCTCGATCTCCTaGCCTCTTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMMVSIS*PLDPPA
Trigger: GGCGGGTGGATCAAGAGGTCAGGAGATCGAGACCAT...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAAGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 2 (lower is better)
Translates to: IESALLELGLPSIQNCEKAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 2 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR CAA 90 bp AACGATGTGGCATCTGATCCCTTCTTGTTCAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAGACTTCAAGTGCTGCAGGTGAGTAT +
Preference number: 2 (lower is better)
Translates to: NDVASDPFLFNLKTE*GYPVMETSSAAGEY
Trigger: ATACTCACCTGCAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGCCACATCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR CAA 90 bp CTTCCTAGCATTCAACTCGTTCAGTTAACCCCTATTGCCCATGCTTaGACCTCTCATGCATCTGGCCCCATAGAAACCATGAACCTTGTA +
Preference number: 2 (lower is better)
Translates to: LPSIQLVQLTPIAHA*TSHASGPIETMNLV
Trigger: TACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAACGAGTTGAATGCTAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAACCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 2 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR GCA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAACATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR GCA 90 bp TGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTATCACCCACTGGTAACTaGAGAATCAAGGGAAATCAC +
Preference number: 2 (lower is better)
Translates to: WRLQVLQVSIYQGFMCQVSPTGN*RIKGNH
Trigger: GTGATTTCCCTTGATTCTGCAGTTACCAGTGGGTGA...TACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530731.5
3UTR-3UTR CCA 90 bp AGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATCTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 2 (lower is better)
Translates to: RLQVLQVSIYQGFMCQVHLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...ATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR CCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACAGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 2 (lower is better)
Translates to: LFNLKTELGYPVMETSSAAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTTGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 2 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAICRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACCTTCTTGTTCAATCTaGAGACTGAATTGGGCTACC +
Preference number: 2 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPPSCSI*RLNWAT
Trigger: GGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGG...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR TCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGTTGTTTATAAGAGGCTaGAGTTTACTTTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: SDLIKGTPESCLPLLPRELFIRG*SLLYLR
Trigger: CCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAA...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR GCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAACATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 2 (lower is better)
Translates to: IESALLELGLPSIQNCEKHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR GCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTGGTCTGGGCACTTCATaGTGGCATATATTCGAGTAC +
Preference number: 2 (lower is better)
Translates to: LFNLKTELGYPVMETSSAGLGTS*WHIFEY
Trigger: GTACTCGAATATATGCCAGCATGAAGTGCCCAGACC...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR GCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTTGCATGACAAGCATCTaGAGAAGAGCTGACAATGGC +
Preference number: 2 (lower is better)
Translates to: LFNLKTELGYPVMETSSACMTSI*RRADNG
Trigger: GCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCA...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR GCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 2 (lower is better)
Translates to: LFNLKTELGYPVMETSSASPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR GCA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 2 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATAGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 2 (lower is better)
Translates to: SAPAGSRLGISFPIVVLIVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR TCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTTCAAAGATCTGTCTCTaGAAGGCTTCAAAGCTCATA +
Preference number: 2 (lower is better)
Translates to: METSSAAGEYLPRVHVSGSKICL*KASKLI
Trigger: TATGAGCTTTGAAGCCTTTCAGAGACAGATCTTTGA...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCTTCAAAGCTCATAGCTaGATCATTCTCCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVFKAHS*IILRQP
Trigger: GGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAA...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR GCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAIRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR GCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SITLVYKRLKFTLPQAELRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACTGAGCAGTTCTGCATaGCAAGCATCTGCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLLSSSA*QASAEE
Trigger: CTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCTTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCA +
Preference number: 2 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVFKCCR*VSTKGS
Trigger: TGAACCCTTGGTAGATACTCACCTGCAGCACTTGAA...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCGAGGTGATTAGGTCATaGGAGCAGACCTCTCATGAA +
Preference number: 2 (lower is better)
Translates to: IGNYEWQCINHSILTTPSEVIRS*EQTSHE
Trigger: TTCATGAGAGGTCTGCTCTCATGACCTAATCACCTC...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTAGAGTACATAGTGTaGAAAATACGGTTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPLEYIV*KIRFRQ
Trigger: TTGCCTGAACCGTATTTTTCACACTATGTACTCTAG...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR GCA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 2 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR-3UTR GCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTCCCTTGGTAACCTGCTaGTGGGTAACTAAGGCATCC +
Preference number: 2 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSPLVTC*WVTKAS
Trigger: GGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGG...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR-3UTR CCA 90 bp TGGACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 2 (lower is better)
Translates to: WTGLSILSLSRTLDFDDTEVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...AGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMNWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 2 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDNWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAATTGTTTATAAGAGGCTaGAGTTTACTTTACCTCAGG +
Preference number: 2 (lower is better)
Translates to: IESALLELGLPSIQNCEKLFIRG*SLLYLR
Trigger: CCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAA...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp TTTGCTTTAGTTCTACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCACAGTTGCATGGAACATaGAGTTATATTATTACATGG +
Preference number: 2 (lower is better)
Translates to: FALVLPLCRVPRGSGVAPQLHGT*SYIITW
Trigger: CCATGTAATAATATAACTCCATGTTCCATGCAACTG...TGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAACTAAAGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR CAA 90 bp AGTGTACCTTGGACTGGACTTTCCATCTTGAGTTTAAGCAGAACATaGGATTTTGATGATACTGACATGAAAATTAAGCAGCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SVPWTGLSILSLSRT*DFDDTDMKIKQQPG
Trigger: CCCAGGCTGCTGCTTAATTTTCATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCAAGGTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 2 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR TCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTAAGGGAAATCACCCTTaGGAGTTATTTGATGCATTT +
Preference number: 2 (lower is better)
Translates to: LFNLKTELGYPVMETSSAKGNHP*ELFDAF
Trigger: AAATGCATCAAATAACTCTCAAGGGTGATTTCCCTT...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530731.5
3UTR-3UTR GCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAATTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 2 (lower is better)
Translates to: IESALLELGLPSIQNCEKLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGCAGTGTACCTTGGACTaGACTTTCCATCTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMQCTLD*TFHLEF
Trigger: AAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTG...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp GTGAAAAATACGGTTCAGGCAATGATTATGTTAATGACGCCATGCACATTCATTTTACAGTGGCCAGTGTaGTGTGCTCTAAACACTGCT +
Preference number: 2 (lower is better)
Translates to: VKNTVQAMIMLMTPCTFILQWPV*CALNTA
Trigger: AGCAGTGTTTAGAGCACACCACACTGGCCACTGTAA...AATGAATGTGCATGGCGTCATTAACATAATCATTGCCTGAACCGTATTTTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTCTTCTCAGTTTACAGTaGCCAGTGTGGTGTGCTCTA +
Preference number: 2 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSLLSLQ*PVWCAL
Trigger: TAGAGCACACCACACTGGCCACTGTAAACTGAGAAG...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR CAA 90 bp CTCCCTCTGCTGGTCAGATTTATTACTATAAAGTACCAATCCCATTaGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACC +
Preference number: 2 (lower is better)
Translates to: LPLLVRFITIKYQSH*CCPQLAIMNGSALT
Trigger: GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGGTACTTTATAGTAATAAATCTGACCAGCAGAGGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR TCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAAACGATGTGGCATCTaGTCCCTTCTTGTTCAATCT +
Preference number: 2 (lower is better)
Translates to: SITLVYKRLKFTLPQAELKRCGI*SLLVQS
Trigger: AGATTGAACAAGAAGGGATCAGATGCCACATCGTTT...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATCAGTGTACCTTGGACTaGACTTTCCATCTTGAGTTT +
Preference number: 2 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYQCTLD*TFHLEF
Trigger: AAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTG...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTATGAACAGTGTACCTTaGACTGGACTTTCCATCTTG +
Preference number: 2 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSMNSVP*TGLSIL
Trigger: CAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCAT...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR-3UTR TCA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACTCAAAGATCTGTCTCTaGAAGGCTTCAAAGCTCATA +
Preference number: 2 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDSKICL*KASKLI
Trigger: TATGAGCTTTGAAGCCTTTCAGAGACAGATCTTTGA...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCTTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 2 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp GCTATTAACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTAACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: AINRVQKSSCMEHGVILLTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...TAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTTAATAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR CCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCCAGTTGCATGGAACATaGAGTTATATTATTACATGG +
Preference number: 2 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVQLHGT*SYIITW
Trigger: CCATGTAATAATATAACTCCATGTTCCATGCAACTG...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR CAA 90 bp GTGAAGAAAAAGATGAACAGTGTACCTTGGACTGGACTTTCCATCTaGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGAAA +
Preference number: 2 (lower is better)
Translates to: VKKKMNSVPWTGLSI*SLSRTLDFDDTDMK
Trigger: TTTCATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATCTTTTTCTTCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR CAA 90 bp TCTGCTGGTCAGATTTATTACTATAAAGTACCAATCCCATTTGTGTaGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCATTCA +
Preference number: 2 (lower is better)
Translates to: SAGQIYYYKVPIPFV*SSIGNYEWQCINHS
Trigger: TGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGGTACTTTATAGTAATAAATCTGACCAGCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CCA 90 bp AATATCACATGCAAACATCATACCACACTCGTCCAGTTATTTCTTAGGGTTCTTATTGGCAATTATGAATaGCAGTGCATTAACCATTCA +
Preference number: 2 (lower is better)
Translates to: NITCKHHTTLVQLFLRVLIGNYE*QCINHS
Trigger: TGAATGGTTAATGCACTGCCATTCATAATTGCCAAT...AAGAACCCTAAGAAATAACTGGACGAGTGTGGTATGATGTTTGCATGTGATATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR GCA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTTTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 2 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR GCA 72 bp CCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTaGACACATCAAATTTCACCCACTGGTAACTGCAGA +
Preference number: 3 (lower is better)
Translates to: PAAPQVAAHLQV*THQISPTGNCR
Trigger: TCTGCAGTTACCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530731.5
3UTR-3UTR CAA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACATGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 3 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTCPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR GCA 72 bp CGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTaGCTTCCTCTTCTACCACGTGAGGACACTGCAGGA +
Preference number: 3 (lower is better)
Translates to: RLSDLIKGTPES*LPLLPREDTAG
Trigger: TCCTGCAGTGTCCTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR GCA 72 bp ATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCACACATCAAATTTCACC +
Preference number: 3 (lower is better)
Translates to: IAASFSGSPSGS*PSPGLHTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR-3UTR CAA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAACCCTTGAGAGTTATTaGATGCATTTTCGAGCTCCT +
Preference number: 3 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTTLESY*MHFRAP
Trigger: AGGAGCTCGAAAATGCATCAAATAACTCTCAAGGGT...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530731.5
3UTR TCA 72 bp GGGCTACCCTGTGATGGAGACTTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCATGTGTCAGGTACATG +
Preference number: 3 (lower is better)
Translates to: GLPCDGDFKCCR*VSTKGSCVRYM
Trigger: CATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCATCACAGGGTAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR GCA 72 bp CAGTTTACAGTGGCCAGTGTGGTGTGCTCTAAACACTaGTGCCTGATCCCTCCCTCTGCTGGTCAGATTTAT +
Preference number: 3 (lower is better)
Translates to: QFTVASVVCSKH*CLIPPSAGQIY
Trigger: ATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTGTAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAG +
Preference number: 3 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLNLKTE*GYPVME
Trigger: CTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATT...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CAA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTTTGCCCTCACCCTCATaGACACTGGATGTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPLPSPS*TLDVVK
Trigger: TTTGACAACATCCAGTGTCAATGAGGGTGAGGGCAA...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR TCA 72 bp CAGTGGCCAGTGTGGTGTGCTCTAAACACTGCTGCCTaGTCCCTCCCTCTGCTGGTCAGATTTATTACTATA +
Preference number: 3 (lower is better)
Translates to: QWPVWCALNTAA*SLPLLVRFITI
Trigger: TATAGTAATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 72 bp TTTACAGTGGCCAGTGTGGTGTGCTCTAAACACTGCTaGCTGATCCCTCCCTCTGCTGGTCAGATTTATTAC +
Preference number: 3 (lower is better)
Translates to: FTVASVVCSKHC*LIPPSAGQIYY
Trigger: GTAATAAATCTGACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACACCACACTGGCCACTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CCA 72 bp AGGTATATAGACACTTCTGGTCTGGGCACTTCATGCTaGCATATATTCGAGTACTGCAATAGCCCACGGGGT +
Preference number: 3 (lower is better)
Translates to: RYIDTSGLGTSC*HIFEYCNSPRG
Trigger: ACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGTGTCTATATACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
3UTR-3UTR CAA 90 bp TTTGCTTTAGTTCTACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCATGCAGGGGCTGGGACTaGATATTCCTTGAATTAGGA +
Preference number: 3 (lower is better)
Translates to: FALVLPLCRVPRGSGVAPCRGWD*IFLELG
Trigger: TCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCA...TGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAACTAAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR-3UTR CAA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAGATGAACAGTGTACCTaGGACTGGACTTTCCATCTT +
Preference number: 3 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRDEQCT*DWTFHL
Trigger: AAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATC...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp AGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATATTGCCCTCACCCTCATaGACACTGGATGTTGTCAAA +
Preference number: 3 (lower is better)
Translates to: RLMPEKKSIYPSTPPLPILPSPS*TLDVVK
Trigger: TTTGACAACATCCAGTGTCAATGAGGGTGAGGGCAA...TATTGGGAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR TCA 72 bp GAACAATTTCAAACTGAGGCTGCACACCACCATCCTTaGTCTGACAGGTATATAGACACTTCTGGTCTGGGC +
Preference number: 3 (lower is better)
Translates to: EQFQTEAAHHHP*SDRYIDTSGLG
Trigger: GCCCAGACCAGAAGTGTCTATATACCTGTCAGATCAAGGATGGTGGTGTGCAGCCTCAGTTTGAAATTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR GCA 72 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATaGATCTGGCCCCATAGAAACCATGAACCTTGTAAC +
Preference number: 3 (lower is better)
Translates to: SVNPYCPCFDLS*IWPHRNHEPCN
Trigger: GTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CCA 72 bp AACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTaGCCCCATAGAAACCATGAACCTTGTAACAGATTG +
Preference number: 3 (lower is better)
Translates to: NPYCPCFDLSCI*PHRNHEPCNRL
Trigger: CAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAGGCCCTCACCAGACATaGAATCTGCGCTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLGPHQT*NLRSLN
Trigger: GTTCAAGGAGCGCAGATTCAATGTCTGGTGAGGGCC...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR-3UTR CAA 90 bp TTTGCTTTAGTTCTACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAAAGTACCAATCCCATTaGTGTTGTCCTCAATTGGCA +
Preference number: 3 (lower is better)
Translates to: FALVLPLCRVPRGSGVAPKYQSH*CCPQLA
Trigger: TGCCAATTGAGGACAACACAAATGGGATTGGTACTT...TGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAACTAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
3UTR-3UTR CAA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAAGTCCCCTTCCCGATTaGCTATTATACAAAGTTTGT +
Preference number: 3 (lower is better)
Translates to: VQLTPIAHALTSHASGPISPLPD*LLYKVC
Trigger: ACAAACTTTGTATAATAGCAAATCGGGAAGGGGACT...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATCTTTCCAGACAGCCCTaGGTAACCTGCTGCTGGGTA +
Preference number: 3 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYLSRQP*VTCCWV
Trigger: TACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR TCA 72 bp AAAATCTACACACTTTACAAGGAACGTTGGCTCCCCTaGGGACTTCCTAGCATTCAACTCGTTCAGTTAACC +
Preference number: 3 (lower is better)
Translates to: KIYTLYKERWLP*GLPSIQLVQLT
Trigger: GGTTAACTGAACGAGTTGAATGCTAGGAAGTCCTCAGGGGAGCCAACGTTCCTTGTAAAGTGTGTAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR GCA 72 bp GTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTaGTACTACAGACTTAATGTTTATATGTCCCCAAAA +
Preference number: 3 (lower is better)
Translates to: VRISLSPSLVSC*YYRLNVYMSPK
Trigger: TTTTGGGGACATATAAACATTAAGTCTGTAGTAGCAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR GCA 72 bp TTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTaGATTAACCATTCAATTCTCACCACTCCATCCCCA +
Preference number: 3 (lower is better)
Translates to: FVLSSIGNYEWQ*INHSILTTPSP
Trigger: TGGGGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGTGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 3 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMCPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR-3UTR CAA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGCCAATCCCATTTGTGTaGTCCTCAATTGGCAATTAT +
Preference number: 3 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMPIPFV*SSIGNY
Trigger: ATAATTGCCAATTGAGGACAACACAAATGGGATTGG...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CCA 72 bp ATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATaGCAGTGCATTAACCATTCAATTCTCACCACTCCA +
Preference number: 3 (lower is better)
Translates to: IPFVLSSIGNYE*QCINHSILTTP
Trigger: TGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR-3UTR CAA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAACTGGACTTTCCATCTaGAGTTTAAGCAGAACATTG +
Preference number: 3 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLTGLSI*SLSRTL
Trigger: CAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR CCA 72 bp AAATGTGAAGAAAAAGATGAACAGTGTACCTTGGACTaGACTTTCCATCTTGAGTTTAAGCAGAACATTGGA +
Preference number: 3 (lower is better)
Translates to: KCEEKDEQCTLD*TFHLEFKQNIG
Trigger: TCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATCTTTTTCTTCACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACATGGCCTTGGCCGCTTTaGGCAGCCGCAGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTWPWPL*AAAGTS
Trigger: TGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCA...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp ATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGTGGCCTTGGCCGCTTTaGGCAGCCGCAGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: IAASFSGSPSGSCPSPGLWPWPL*AAAGTS
Trigger: TGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCA...CAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTCGTCCAGCAGGCTCATaGTCCAGCCCCGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPRPAGS*SSPATG
Trigger: CCCCGTAGCGGGGCTGGACCATGAGCCTGCTGGACG...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGCGTCCAGCAGGCTCATaGTCCAGCCCCGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLRPAGS*SSPATG
Trigger: CCCCGTAGCGGGGCTGGACCATGAGCCTGCTGGACG...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTTCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: APQVAAHLQVCTHQISPTSSWPC*TAAEPA
Trigger: CGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGA...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGGACGTTCCCAGGGCTaGCCGCAGGGCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIGRSQG*PQGQRH
Trigger: GTGTCTCTGGCCCTGCGGTCAGCCCTGGGAACGTCC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGGGGGCCCCAGGACGCTaGCGGCATCGGATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREGAPGR*RHRILS
Trigger: ACTTAGGATCCGATGCCGGCAGCGTCCTGGGGCCCC...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGGGGCCCCAGGACGCTaGCGGCATCGGATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLGAPGR*RHRILS
Trigger: ACTTAGGATCCGATGCCGGCAGCGTCCTGGGGCCCC...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTCTGGCCTTGCTGGACTaGAGCGGAGCCCGCGGCGAG +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSLALLD*SGARGE
Trigger: CTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAG...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGTTGCCCAGGCTGGAGTaGAGTGGCGCGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPRELPRLE*SGAVSA
Trigger: AGCCGAGACCGCGCCACTGCACTCCAGCCTGGGCAA...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCAGGACGTTCCCAGGGCTaGCCGCAGGGCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPGRSQG*PQGQRH
Trigger: GTGTCTCTGGCCCTGCGGTCAGCCCTGGGAACGTCC...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR TCA 90 bp ATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGATGGCACTCTCATCATaGAAGCCAGGTCGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: IAASFSGSPSGSCPSPGLMALSS*KPGRSV
Trigger: CACCGACCGACCTGGCTTTCATGATGAGAGTGCCAT...CAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATATCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPISSWPC*TAAEPA
Trigger: CGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGA...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAAGCCCACGGGGTAGATaGCACTCTCATCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTSPRGR*HSHHES
Trigger: GCTTTCATGATGAGAGTGCCATCTACCCCGTGGGCT...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACACCCAGTGCTGGGCCCTaGAATAGGCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTPSAGP*NRPSSL
Trigger: CAGGGAGCTGGGCCTATTTCAGGGCCCAGCACTGGG...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR TCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGACCCAGTGCTGGGCCCTaGAATAGGCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRPSAGP*NRPSSL
Trigger: CAGGGAGCTGGGCCTATTTCAGGGCCCAGCACTGGG...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR TCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTNWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTGATCTCCTGACCTCTTaGTCCACCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLDLLTS*STRLSL
Trigger: GAGGCTGAGGCGGGTGGATCAAGAGGTCAGGAGATC...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp CCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGATGGTCTCGATCTCCTaGCCTCTTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: PSGSCPSPGLHTSNFTHWMVSIS*PLDPPA
Trigger: GGCGGGTGGATCAAGAGGTCAGGAGATCGAGACCAT...CCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR GCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGGGGCCCCAGGACGCTaGCGGCATCGGATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSGAPGR*RHRILS
Trigger: ACTTAGGATCCGATGCCGGCAGCGTCCTGGGGCCCC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAACTGTGGGAAGGAGCTaGAGCCTGTACTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQTVGRS*SLYFPF
Trigger: GAAGGGGAAGTACAGGCTGCAGCTCCTTCCCACAGT...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR GCA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCACAGCCCTTGGTAACCTaGTGCTGGGTAACTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPQPLVT*CWVTKA
Trigger: TGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTG...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACAAGCGGGCGGGAGCGCTaGCTTTGTCTGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTSGRER*LCLFRA
Trigger: AGCCCGGAACAGACAAAGCCAGCGCTCCCGCCCGCT...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp TGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTATCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: WRLQVLQVSIYQGFMCQVSSWPC*TAAEPA
Trigger: CGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGA...TACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR CAA 72 bp TCTGGGTCCTTTTGTCCCTCCCTTTCCAGACAGCCCTaGGTAACCTGCTGCTGGGTAACTAAGGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: SGSFCPSLSRQP*VTCCWVTKASH
Trigger: GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGAGGGACAAAAGGACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACGAACGTTGGCTCCCCTaGGGACTTCCTAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHERWLP*GLPSIQ
Trigger: TTGAATGCTAGGAAGTCCTCAGGGGAGCCAACGTTC...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGGAACGTTGGCTCCCCTaGGGACTTCCTAGCATTCAA +
Preference number: 4 (lower is better)
Translates to: LSRQPLVTCCWVTKASHRERWLP*GLPSIQ
Trigger: TTGAATGCTAGGAAGTCCTCAGGGGAGCCAACGTTC...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGTTTTCATCCTGGCCTTaGTGGACTGCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLFSSWP*WTAAEP
Trigger: GGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAA...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAGGTCTGGGCACTTCATaGTGGCATATATTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTGLGTS*WHIFEY
Trigger: GTACTCGAATATATGCCAGCATGAAGTGCCCAGACC...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACATGCATGACAAGCATCTaGAGAAGAGCTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTCMTSI*RRADNG
Trigger: GCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCA...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGTTGCCCAGGCTGGAGTaGAGTGGCGCGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLLPRLE*SGAVSA
Trigger: AGCCGAGACCGCGCCACTGCACTCCAGCCTGGGCAA...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACACAAACACCGTGGCCTTaGCCGCTTTGCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTQTPWP*PLCAAA
Trigger: TGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTG...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAAGCCCACGGGGTAGATaGCACTCTCATCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQSPRGR*HSHHES
Trigger: GCTTTCATGATGAGAGTGCCATCTACCCCGTGGGCT...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCACGGGGTATGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: VWALHAGIYSSTAIAHGVCRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...TACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp CCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCCTGGGTTGCAGGGGCTaGGACTTGATATTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: PIHIPPWAVLIRGQPEVALGCRG*DLIFLE
Trigger: TTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAG...GGCTACCTCTGGCTGCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTATGGCACTCTCATCATaGAAGCCAGGTCGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLMALSS*KPGRSV
Trigger: CACCGACCGACCTGGCTTTCATGATGAGAGTGCCAT...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGAATGGTCTCGATCTCCTaGCCTCTTGATCCACCCGCC +
Preference number: 4 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRMVSIS*PLDPPA
Trigger: GGCGGGTGGATCAAGAGGTCAGGAGATCGAGACCAT...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTTGGCCTTGGCCGCTTTaGGCAGCCGCAGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSWPWPL*AAAGTS
Trigger: TGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCA...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACTTCAAAGCTCATAGCTaGATCATTCTCCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHFKAHS*IILRQP
Trigger: GGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAA...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGTAAGGGAGCTTTTTCATCCTaGCCTTGCTGGACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAGEYLPRVHVSGTWAGKGAFSS*PCWTAA
Trigger: CGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCC...CTTACCAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGGATGGTATTGGGAGGTaGGGCCTTTGGGAGGTGATT +
Preference number: 4 (lower is better)
Translates to: PSGSCPSPGLHTSNFTHWDGIGR*GLWEVI
Trigger: AATCACCTCCCAAAGGCCCCACCTCCCAATACCATC...CCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
3UTR CAA 72 bp GAAGTGGGCCCTCACCAGACATTGAATCTGCGCTCCTaGAACTTGGACTTCCCAGCATCCAGAACTGTGAGA +
Preference number: 4 (lower is better)
Translates to: EVGPHQTLNLRS*NLDFPASRTVR
Trigger: TCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAATGTCTGGTGAGGGCCCACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCATCCAGGGCAATGGGCTaGACCAGCTTGCGAGCACCT +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPSRAMG*TSLRAP
Trigger: AGGTGCTCGCAAGCTGGTTCAGCCCATTGCCCTGGA...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR GCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCATTTTCATCCTGGCCTTaGTGGACTGCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSFSSWP*WTAAEP
Trigger: GGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAA...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp TGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTATTTTCATCCTGGCCTTaGTGGACTGCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WRLQVLQVSIYQGFMCQVFSSWP*WTAAEP
Trigger: GGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAA...TACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAACTGTGGGAAGGAGCTaGAGCCTGTACTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPITVGRS*SLYFPF
Trigger: GAAGGGGAAGTACAGGCTGCAGCTCCTTCCCACAGT...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTGTGTGCTCTAAACACTaGTGCCTGATCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLVCSKH*CLIPPS
Trigger: AGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACAC...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCAGTTAACCCCTATTaGCCATGCTTTGACCTCTCA +
Preference number: 4 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPSVNPY*PCFDLS
Trigger: TGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR CCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGGAGCTTTTTCATCCTaGCCTTGCTGGACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIGAFSS*PCWTAA
Trigger: CGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCACGGGGTACATTTTCAAACACCGTaGCCTTGGCCGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VWALHAGIYSSTAIAHGVHFQTP*PWPLCA
Trigger: TGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATG...TACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGAAGTCAGGGGCAAACTaGAACTGTGGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREKSGAN*NCGKEL
Trigger: CAGCTCCTTCCCACAGTTCCAGTTTGCCCCTGACTT...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAGCCCACGGGGTAGATaGCACTCTCATCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLSPRGR*HSHHES
Trigger: GCTTTCATGATGAGAGTGCCATCTACCCCGTGGGCT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCATGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSCRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTATACACATACCCCCATaGGCTGTTCTAATTCGGGGG +
Preference number: 4 (lower is better)
Translates to: APQVAAHLQVCTHQISPTIHIPP*AVLIRG
Trigger: CCCCCGAATTAGAACAGCCCATGGGGGTATGTGTAT...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR TCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGCCTTCAGTTAGAGCCTaGAGCTGGAGGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREPSVRA*SWRSFF
Trigger: AAAGAAGCTCCTCCAGCTTCAGGCTCTAACTGAAGG...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGCCCCAGTGCTGGGCCCTaGAATAGGCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ITLVYKRLKFTLPQAELSPSAGP*NRPSSL
Trigger: CAGGGAGCTGGGCCTATTTCAGGGCCCAGCACTGGG...GCTTAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTATGGCACTCTCATCATaGAAGCCAGGTCGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSMALSS*KPGRSV
Trigger: CACCGACCGACCTGGCTTTCATGATGAGAGTGCCAT...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAACCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 4 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 4 (lower is better)
Translates to: PSGSCPSPGLHTSNFTHWAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...CCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCTGAGCAGTTCTGCATaGCAAGCATCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLLSSSA*QASAEE
Trigger: CTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAG...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPNWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCAAAACGATGTGGCATCTaGTCCCTTCTTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPKRCGI*SLLVQS
Trigger: AGATTGAACAAGAAGGGATCAGATGCCACATCGTTT...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTAAACACTGCTGCCTaGTCCCTCCCTCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPLNTAA*SLPLLV
Trigger: GACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAG...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp GTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCACGGGGTATTCAAAGCTCATAGCTaGATCATTCTCCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VWALHAGIYSSTAIAHGVFKAHS*IILRQP
Trigger: GGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAA...TACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAAGGCGTGAGCCACCGTaGCCAGCTTTTCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIRREPP*PAFQVS
Trigger: AGAAACTTGAAAAGCTGGGCACGGTGGCTCACGCCT...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAATGGGCTGAACCAGCTTaGGAGCACCTCCCGCCATTT +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKWAEPA*EHLPPF
Trigger: AAATGGCGGGAGGTGCTCGCAAGCTGGTTCAGCCCA...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGAGCGGGCGGGAGCGCTaGCTTTGTCTGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMSGRER*LCLFRA
Trigger: AGCCCGGAACAGACAAAGCCAGCGCTCCCGCCCGCT...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTGGAGCTTTTTCATCCTaGCCTTGCTGGACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSGAFSS*PCWTAA
Trigger: CGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCC...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: METSSAAGEYLPRVHVSGAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGTGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLCRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTTTGGTAACCTGCTGCTaGGTAACTAAGGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPLVTCC*VTKASH
Trigger: GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAA...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp TGGACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGGACGTTCCCAGGGCTaGCCGCAGGGCCAGAGACAC +
Preference number: 4 (lower is better)
Translates to: WTGLSILSLSRTLDFDDTGRSQG*PQGQRH
Trigger: GTGTCTCTGGCCCTGCGGTCAGCCCTGGGAACGTCC...AGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATAATGGCACTCTCATCATaGAAGCCAGGTCGGTCGGTG +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLIMALSS*KPGRSV
Trigger: CACCGACCGACCTGGCTTTCATGATGAGAGTGCCAT...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTCCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 4 (lower is better)
Translates to: APQVAAHLQVCTHQISPTPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTTTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLFKCCR*VSTKGS
Trigger: TGAACCCTTGGTAGATACTCACCTGCAGCACTTGAA...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTCCTTCTTGTTCAATCTaGAGACTGAATTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: APQVAAHLQVCTHQISPTPSCSI*RLNWAT
Trigger: GGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGG...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp GACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTGAGGCTGCACTCCTCTTCTACCACGTaGGGACACTGCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: DNGILGVIFRNNFKLRLHSSSTT*GHCRKT
Trigger: TGTCTTCCTGCAGTGTCCTCACGTGGTAGAAGAGGA...GTGCAGCCTCAGTTTGAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGATCCTCTTCTACCACGTaGGGACACTGCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRSSSTT*GHCRKT
Trigger: TGTCTTCCTGCAGTGTCCTCACGTGGTAGAAGAGGA...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTGAGGTGATTAGGTCATaGGAGCAGACCTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLEVIRS*EQTSHE
Trigger: TTCATGAGAGGTCTGCTCTCATGACCTAATCACCTC...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGGAGGTGATTAGGTCATaGGAGCAGACCTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREEVIRS*EQTSHE
Trigger: TTCATGAGAGGTCTGCTCTCATGACCTAATCACCTC...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp TTTGCTTTAGTTCTACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCATGCTCTAAACACTGCTaGCTGATCCCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: FALVLPLCRVPRGSGVAPCSKHC*LIPPSA
Trigger: AGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCA...TGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAACTAAAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR GCA 90 bp AGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGAGCTGTGGCCAGTGTGGTGTaGTCTAAACACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSAYSPEQFCMTSICRRAVASVV*SKHCCL
Trigger: CAGGCAGCAGTGTTTAGAGCACACCACACTGGCCAC...AGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR GCA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTTCACCCACTGGTAACTaGAGAATCAAGGGAAATCAC +
Preference number: 4 (lower is better)
Translates to: APQVAAHLQVCTHQISPTSPTGN*RIKGNH
Trigger: GTGATTTCCCTTGATTCTGCAGTTACCAGTGGGTGA...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530731.5
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGCGTCCAGCAGGCTCATaGTCCAGCCCCGCTACGGGG +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMRPAGS*SSPATG
Trigger: CCCCGTAGCGGGGCTGGACCATGAGCCTGCTGGACG...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTCGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPRYFSF*LFFGSF
Trigger: AAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCG...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp ATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGCCAAACACCGTGGCCTTaGCCGCTTTGCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: ITLVYKRLKFTLPQAELSQTPWP*PLCAAA
Trigger: TGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTG...GCTTAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCCAAACACCGTGGCCTTaGCCGCTTTGCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVQTPWP*PLCAAA
Trigger: TGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTG...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGTAAGCTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: AAGEYLPRVHVSGTWAGKLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...CTTACCAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: METSSAAGEYLPRVHVSGEVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICREVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGATGAACAGTGTACCTTaGACTGGACTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: LSRQPLVTCCWVTKASHRMNSVP*TGLSIL
Trigger: CAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCAT...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTTTACAGTGGCCAGTGTaGTGTGCTCTAAACACTGCT +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLLQWPV*CALNTA
Trigger: AGCAGTGTTTAGAGCACACCACACTGGCCACTGTAA...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAATACACATACCCCCATaGGCTGTTCTAATTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIIHIPP*AVLIRG
Trigger: CCCCCGAATTAGAACAGCCCATGGGGGTATGTGTAT...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTGACCTCTCATGCATCTaGCCCCATAGAAACCATGAA +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPDLSCI*PHRNHE
Trigger: TTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTC...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCAAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPNWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR TCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGCCTTCTTGTTCAATCTaGAGACTGAATTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREPSCSI*RLNWAT
Trigger: GGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGG...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAACTATTGCCCATGCTTTaGCCTCTCATGCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKLLPML*PLMHLA
Trigger: GGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAG...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GTGAAAAATACGGTTCAGGCAATGATTATGTTAATGACGCCATGCACATTCATTGGGGCCCCAGGACGCTaGCGGCATCGGATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: VKNTVQAMIMLMTPCTFIGAPGR*RHRILS
Trigger: ACTTAGGATCCGATGCCGGCAGCGTCCTGGGGCCCC...AATGAATGTGCATGGCGTCATTAACATAATCATTGCCTGAACCGTATTTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCTGGCCTTGGCCGCTTTaGGCAGCCGCAGGTACTTCA +
Preference number: 4 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTWPWPL*AAAGTS
Trigger: TGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCA...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGCATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGATTCAAAGCTCATAGCTaGATCATTCTCCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRFKAHS*IILRQP
Trigger: GGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAA...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp AGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATACCCTTGGTAACCTGCTaGTGGGTAACTAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: RLMPEKKSIYPSTPPLPIPLVTC*WVTKAS
Trigger: GGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGG...TATTGGGAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAACAGCCCTTGGTAACCTaGTGCTGGGTAACTAAGGCA +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKQPLVT*CWVTKA
Trigger: TGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTG...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGTGCTCTAAACACTGCTaGCTGATCCCTCCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLCSKHC*LIPPSA
Trigger: AGCAGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCA...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGAGGCGTGAGCCACCGTaGCCAGCTTTTCAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLRREPP*PAFQVS
Trigger: AGAAACTTGAAAAGCTGGGCACGGTGGCTCACGCCT...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATAAAGTCAGGGGCAAACTaGAACTGTGGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLIKSGAN*NCGKEL
Trigger: CAGCTCCTTCCCACAGTTCCAGTTTGCCCCTGACTT...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp GCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGTAAGGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: AAGEYLPRVHVSGTWAGKGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...CTTACCAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCAGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATAGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLIEVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAAGATGGTATTGGGAGGTaGGGCCTTTGGGAGGTGATT +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKDGIGR*GLWEVI
Trigger: AATCACCTCCCAAAGGCCCCACCTCCCAATACCATC...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAGACCCCCTAGTCCGATaGGGAACACAGGCCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELDPLVR*GTQAVL
Trigger: CAGGACGGCCTGTGTTCCCCATCGGACTAGGGGGTC...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR TCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATACTGAGCAGTTCTGCATaGCAAGCATCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLILSSSA*QASAEE
Trigger: CTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAG...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp AGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGAGCTCTGAGCAGTTCTGCATaGCAAGCATCTGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SSAYSPEQFCMTSICRRALSSSA*QASAEE
Trigger: CTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAG...AGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTTTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: METSSAAGEYLPRVHVSGFKCCR*VSTKGS
Trigger: TGAACCCTTGGTAGATACTCACCTGCAGCACTTGAA...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATAAATTGGGCTACCCTGTaGTGGAGACTTCAAGTGCTG +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLINWATL*WRLQVL
Trigger: CAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATT...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCTCTCATGAACCGGCTTAGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTAAACGATGTGGCATCTaGTCCCTTCTTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: PLMNRLSDLIKGTPESCLKRCGI*SLLVQS
Trigger: AGATTGAACAAGAAGGGATCAGATGCCACATCGTTT...AAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACTAAGCCGGTTCATGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAAACGATGTGGCATCTaGTCCCTTCTTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLKRCGI*SLLVQS
Trigger: AGATTGAACAAGAAGGGATCAGATGCCACATCGTTT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAGAGGTGATTAGGTCATaGGAGCAGACCTCTCATGAA +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICREVIRS*EQTSHE
Trigger: TTCATGAGAGGTCTGCTCTCATGACCTAATCACCTC...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCCTAAACACTGCTGCCTaGTCCCTCCCTCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: IGNYEWQCINHSILTTPSLNTAA*SLPLLV
Trigger: GACCAGCAGAGGGAGGGATCAGGCAGCAGTGTTTAG...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATGAACACAGGCCGTCCTaGGGGATCCAGGGCAATGGG +
Preference number: 4 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYEHRPS*GIQGNG
Trigger: CCCATTGCCCTGGATCCCTCAGGACGGCCTGTGTTC...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCTTTTCATCCTGGCCTTaGTGGACTGCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVFSSWP*WTAAEP
Trigger: GGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAA...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTGAGGCTGCACTGCATGACAAGCATCTaGAGAAGAGCTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: DNGILGVIFRNNFKLRLHCMTSI*RRADNG
Trigger: GCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCA...GTGCAGCCTCAGTTTGAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCATGCATGACAAGCATCTaGAGAAGAGCTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPCMTSI*RRADNG
Trigger: GCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCA...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR GCA 90 bp GACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTGAGGCTGCACAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: DNGILGVIFRNNFKLRLHSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...GTGCAGCCTCAGTTTGAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCAGCCCCTCAGGTAGCTaGCCATCTCCAGGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVSPSGS*PSPGLH
Trigger: GTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCT...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp TCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGATTTGTTGTAGCAGCCTaGAGCTCTCTATCACTCTTG +
Preference number: 4 (lower is better)
Translates to: SVNPYCPCFDLSCIWPHRFVVAA*SSLSLL
Trigger: CAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAA...TCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GCTATTAACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTATCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: AINRVQKSSCMEHGVILLSSWPC*TAAEPA
Trigger: CGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGA...TAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTTAATAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGACGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRRYFSF*LFFGSF
Trigger: AAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCG...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAACGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKRYFSF*LFFGSF
Trigger: AAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCG...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGCAAACACCGTGGCCTTaGCCGCTTTGCGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMQTPWP*PLCAAA
Trigger: TGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTG...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACACTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCACTGACAATGGCATTCTaGGGGTCATCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPLTMAF*GSSSGT
Trigger: TGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000530731.5
CDS-3UTR CCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp ATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGCTGCAGGCTGAAGCTCTaGGAGGTCCAAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: ITLVYKRLKFTLPQAELSCRLKL*EVQGSW
Trigger: CCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCA...GCTTAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCAGGGATCCAGGGCAATaGGCTGAACCAGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVRDPGQ*AEPACE
Trigger: CTCGCAAGCTGGTTCAGCCCATTGCCCTGGATCCCT...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAAGTTCCAAGGGGTTCTaGTGTAGCTCCAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPSSKGF*CSSKQQ
Trigger: CTGCTGTTTGGAGCTACACCAGAACCCCTTGGAACT...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR TCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp AGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 4 (lower is better)
Translates to: RLQVLQVSIYQGFMCQVHAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...ATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp AGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTCCCAATATTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: RLMPEKKSIYPSTPPLPIFKCCR*VSTKGS
Trigger: TGAACCCTTGGTAGATACTCACCTGCAGCACTTGAA...TATTGGGAGTGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTGTTCAATCTGAAGACTaGATTGGGCTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: METSSAAGEYLPRVHVSGVQSED*IGLPCD
Trigger: ATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAAC...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp TGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTAGTTCAATCTGAAGACTaGATTGGGCTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: WRLQVLQVSIYQGFMCQVVQSED*IGLPCD
Trigger: ATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAAC...TACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp CCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGATGGTTTCAGTGTACTaGGCTAAAAAGCACATTATC +
Preference number: 4 (lower is better)
Translates to: PSGSCPSPGLHTSNFTHWMVSVY*AKKHII
Trigger: GATAATGTGCTTTTTAGCTCAGTACACTGAAACCAT...CCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCACTGTGGGAAGGAGCTaGAGCCTGTACTTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVTVGRS*SLYFPF
Trigger: GAAGGGGAAGTACAGGCTGCAGCTCCTTCCCACAGT...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGATTTGTTGTAGCAGCCTaGAGCTCTCTATCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRFVVAA*SSLSLL
Trigger: CAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAA...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR GCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCATTTGTTGTAGCAGCCTaGAGCTCTCTATCACTCTTG +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSFVVAA*SSLSLL
Trigger: CAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAA...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATCAGCCCTTGGTAACCTaGTGCTGGGTAACTAAGGCA +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYQPLVT*CWVTKA
Trigger: TGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTG...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATGTGTGCTCTAAACACTaGTGCCTGATCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYVCSKH*CLIPPS
Trigger: AGAGGGAGGGATCAGGCAGCAGTGTTTAGAGCACAC...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCGTGGCCAGTGTGGTGTaGTCTAAACACTGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: IGNYEWQCINHSILTTPSVASVV*SKHCCL
Trigger: CAGGCAGCAGTGTTTAGAGCACACCACACTGGCCAC...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTGATGTGGGAATTCACTaGATTTCCCCAAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPDVGIH*ISPNVR
Trigger: TCTTACATTTGGGGAAATGCAGTGAATTCCCACATC...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AGTGATCTTATAAAAGGGACCCCGGAGAGCTGCCTTCCTCTTCTACCACGTGAGGTGAATGATGGTTTTTaGTTTAGTTCTACCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SDLIKGTPESCLPLLPREVNDGF*FSSTPL
Trigger: CAGAGGGGTAGAACTAAAGCAAAAACCATCATTCAC...CTCACGTGGTAGAAGAGGAAGGCAGCTCTCCGGGGTCCCTTTTATAAGATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATCATTTTCAAACACCGTaGCCTTGGCCGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYHFQTP*PWPLCA
Trigger: TGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATG...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCACTGACAATGGCATTCTaGGGGTCATCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPLTMAF*GSSSGT
Trigger: TGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAGGATCAGGTTGTGGATaGCTGGATGAGAAAATCCAA +
Preference number: 4 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRGSGCG*LDEKIQ
Trigger: TTGGATTTTCTCATCCAGCCATCCACAACCTGATCC...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATACAGTGTACCTTGGACTaGACTTTCCATCTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIQCTLD*TFHLEF
Trigger: AAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTG...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCTTACAGTGGCCAGTGTaGTGTGCTCTAAACACTGCT +
Preference number: 4 (lower is better)
Translates to: ICRRADNGILGVIFRNNFLQWPV*CALNTA
Trigger: AGCAGTGTTTAGAGCACACCACACTGGCCACTGTAA...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR CCA 90 bp AGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGAGCTCTTCTCAGTTTACAGTaGCCAGTGTGGTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: SSAYSPEQFCMTSICRRALLSLQ*PVWCAL
Trigger: TAGAGCACACCACACTGGCCACTGTAAACTGAGAAG...AGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
3UTR CAA 72 bp GCATCTGATCCCTTCTTGTTCAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAGACTTCAAGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASDPFLFNLKTE*GYPVMETSSAA
Trigger: TGCAGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR CAA 72 bp ATTCAACTCGTTCAGTTAACCCCTATTGCCCATGCTTaGACCTCTCATGCATCTGGCCCCATAGAAACCATG +
Preference number: 4 (lower is better)
Translates to: IQLVQLTPIAHA*TSHASGPIETM
Trigger: CATGGTTTCTATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAACGAGTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATCCTTCAGTTAGAGCCTaGAGCTGGAGGAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYPSVRA*SWRSFF
Trigger: AAAGAAGCTCCTCCAGCTTCAGGCTCTAACTGAAGG...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGTTCAATCTGAAGACTaGATTGGGCTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLVQSED*IGLPCD
Trigger: ATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAAC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATACTAGAGTACATAGTGTaGAAAATACGGTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPILEYIV*KIRFRQ
Trigger: TTGCCTGAACCGTATTTTTCACACTATGTACTCTAG...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATACATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SAPAGSRLGISFPIVVLIHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTGTCCCCTTCCCGATTTaGTATTATACAAAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPVPFPI*YYTKFV
Trigger: AACAAACTTTGTATAATAGCAAATCGGGAAGGGGAC...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGAAGTCAGGGGCAAACTaGAACTGTGGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMKSGAN*NCGKEL
Trigger: CAGCTCCTTCCCACAGTTCCAGTTTGCCCCTGACTT...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCAGCCCACGGGGTAGATaGCACTCTCATCATGAAAGC +
Preference number: 4 (lower is better)
Translates to: IGNYEWQCINHSILTTPSSPRGR*HSHHES
Trigger: GCTTTCATGATGAGAGTGCCATCTACCCCGTGGGCT...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTGCTCCTGGACAGCTCTaGATCAGGTTGTGGATGGCT +
Preference number: 4 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAIAPGQL*IRLWMA
Trigger: AGCCATCCACAACCTGATCCAGAGCTGTCCAGGAGC...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp TGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTAATGAACAGTGTACCTTaGACTGGACTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: WRLQVLQVSIYQGFMCQVMNSVP*TGLSIL
Trigger: CAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCAT...TACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTTCCTCTTCTACCACGTaGGGACACTGCAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAISSSTT*GHCRKT
Trigger: TGTCTTCCTGCAGTGTCCTCACGTGGTAGAAGAGGA...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTCTATTGCCCATGCTTTaGCCTCTCATGCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAILLPML*PLMHLA
Trigger: GGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAG...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: NRVQKSSCMEHGVILLHGRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...GCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTTTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 4 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGTCCAAAAATCCAGTTaGATGGAACATGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIVQKSS*MEHGVI
Trigger: TATAACTCCATGTTCCATGCAACTGGATTTTTGGAC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCCCCTTGGTAACCTGCTaGTGGGTAACTAAGGCATCC +
Preference number: 4 (lower is better)
Translates to: NRVQKSSCMEHGVILLHGPLVTC*WVTKAS
Trigger: GGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGG...GCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGTCCCCTTCCCGATTTaGTATTATACAAAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIVPFPI*YYTKFV
Trigger: AACAAACTTTGTATAATAGCAAATCGGGAAGGGGAC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp AATATCACATGCAAACATCATACCACACTCGTCCAGTTATTTCTTAGGGTTCTTGGAGCTTTTTCATCCTaGCCTTGCTGGACTGCAGCG +
Preference number: 4 (lower is better)
Translates to: NITCKHHTTLVQLFLRVLGAFSS*PCWTAA
Trigger: CGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCC...AAGAACCCTAAGAAATAACTGGACGAGTGTGGTATGATGTTTGCATGTGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATCTGACAATGGCATTCTaGGGGTCATCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYLTMAF*GSSSGT
Trigger: TGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAGAGGTCCAAGGATCCTaGCAGAAGGGGATCATTCTG +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELEVQGS*QKGIIL
Trigger: CAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTC...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAAACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp AGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RLQVLQVSIYQGFMCQVHTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...ATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAGATGGTATTGGGAGGTaGGGCCTTTGGGAGGTGATT +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLDGIGR*GLWEVI
Trigger: AATCACCTCCCAAAGGCCCCACCTCCCAATACCATC...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
3UTR CAA 72 bp AATCACGACAAAAACGATGTGGCATCTGATCCCTTCTaGTTCAATCTGAAGACTGAATTGGGCTACCCTGTG +
Preference number: 4 (lower is better)
Translates to: NHDKNDVASDPF*FNLKTELGYPV
Trigger: CACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
3UTR CAA 72 bp ATCTGGCCCCATAGAAACCATGAACCTTGTAACAGATaGATGCCTGAGAAAAAGTCAATCTACCCGTCCACT +
Preference number: 4 (lower is better)
Translates to: IWPHRNHEPCNR*MPEKKSIYPST
Trigger: AGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTCATGGTTTCTATGGGGCCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGCGCACACCACCATCCTTaGTCTGACAGGTATATAGAC +
Preference number: 4 (lower is better)
Translates to: ITLVYKRLKFTLPQAELSAHHHP*SDRYID
Trigger: GTCTATATACCTGTCAGATCAAGGATGGTGGTGTGC...GCTTAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGTCAAAGATCTGTCTCTaGAAGGCTTCAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLSKICL*KASKLI
Trigger: TATGAGCTTTGAAGCCTTTCAGAGACAGATCTTTGA...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp AGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGAGCTTCAAAGATCTGTCTCTaGAAGGCTTCAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: SSAYSPEQFCMTSICRRASKICL*KASKLI
Trigger: TATGAGCTTTGAAGCCTTTCAGAGACAGATCTTTGA...AGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR TCA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTTTGTTTATAAGAGGCTaGAGTTTACTTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSLFIRG*SLLYLR
Trigger: CCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAA...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp TTTGCTTTAGTTCTACCCCTCTGTAGAGTTCCAAGGGGTTCTGGTGTAGCTCCAGGACTTGATATTCCTTaGATTAGGATCACAATCAAG +
Preference number: 4 (lower is better)
Translates to: FALVLPLCRVPRGSGVAPGLDIP*IRITIK
Trigger: CTTGATTGTGATCCTAATTCAAGGAATATCAAGTCC...TGGAGCTACACCAGAACCCCTTGGAACTCTACAGAGGGGTAGAACTAAAGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR TCA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAAGGACTTGATATTCCTTaGATTAGGATCACAATCAAG +
Preference number: 4 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKGLDIP*IRITIK
Trigger: CTTGATTGTGATCCTAATTCAAGGAATATCAAGTCC...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ATGGAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTATGGTTTCAGTGTACTaGGCTAAAAAGCACATTATC +
Preference number: 4 (lower is better)
Translates to: METSSAAGEYLPRVHVSGMVSVY*AKKHII
Trigger: GATAATGTGCTTTTTAGCTCAGTACACTGAAACCAT...ACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTGCAATAGCCCAAAGGGAAATCACCCTTaGGAGTTATTTGATGCATTT +
Preference number: 4 (lower is better)
Translates to: TSGLGTSCWHIFEYCNSPKGNHP*ELFDAF
Trigger: AAATGCATCAAATAACTCTCAAGGGTGATTTCCCTT...TGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530731.5
CDS-3UTR GCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCGGTCTGGGCACTTCATaGTGGCATATATTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVGLGTS*WHIFEY
Trigger: GTACTCGAATATATGCCAGCATGAAGTGCCCAGACC...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GTGAAAAATACGGTTCAGGCAATGATTATGTTAATGACGCCATGCACATTCATTAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VKNTVQAMIMLMTPCTFIRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...AATGAATGTGCATGGCGTCATTAACATAATCATTGCCTGAACCGTATTTTTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGAGAAGACACAAAGGCTaGAGGCTGAAGCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMRRHKG*RLKLWE
Trigger: CTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCT...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGTCCAAAAATCCAGTTaGATGGAACATGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSVQKSS*MEHGVI
Trigger: TATAACTCCATGTTCCATGCAACTGGATTTTTGGAC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGATGTGGGAATTCACTaGATTTCCCCAAATGTAAGA +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLDVGIH*ISPNVR
Trigger: TCTTACATTTGGGGAAATGCAGTGAATTCCCACATC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCAACCCCTATTGCCCATaGTTTGACCTCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: IGNYEWQCINHSILTTPSNPYCP*FDLSCI
Trigger: GATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTT...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GTTCAGTTAACCCCTATTGCCCATGCTTTGACCTCTCATGCATCTGGCCCCATAGTATTTATATCCACTTaGAAACTGTCCTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: VQLTPIAHALTSHASGPIVFIST*KLSLKH
Trigger: ATGCTTCAAGGACAGTTTGCAAGTGGATATAAATAC...TATGGGGCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGCATTTTCAAACACCGTaGCCTTGGCCGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMHFQTP*PWPLCA
Trigger: TGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATG...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTCATTTTCAAACACCGTaGCCTTGGCCGCTTTGCGCA +
Preference number: 4 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSHFQTP*PWPLCA
Trigger: TGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATG...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTACTGGGTTGCAGGGGCTaGGACTTGATATTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELLGCRG*DLIFLE
Trigger: TTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAG...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACTGGGTTGCAGGGGCTaGGACTTGATATTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLLGCRG*DLIFLE
Trigger: TTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp AACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTTGGTAACCTGCTGCTaGGTAACTAAGGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: NRVQKSSCMEHGVILLHGLVTCC*VTKASH
Trigger: GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAA...GCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCCTTCTCAGTTTACAGTaGCCAGTGTGGTGTGCTCTA +
Preference number: 4 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTLLSLQ*PVWCAL
Trigger: TAGAGCACACCACACTGGCCACTGTAAACTGAGAAG...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCCCTTCTTGTTCAATCTaGAGACTGAATTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVPSCSI*RLNWAT
Trigger: GGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGG...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAGGACTTGATATTCCTTaGATTAGGATCACAATCAAG +
Preference number: 4 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPGLDIP*IRITIK
Trigger: CTTGATTGTGATCCTAATTCAAGGAATATCAAGTCC...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATTTCAAAGCTCATAGCTaGATCATTCTCCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYFKAHS*IILRQP
Trigger: GGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAA...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 4 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR GCA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGATGTTAATGACGCCATaGACATTCATTTTTAGTGGC +
Preference number: 4 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLMLMTP*TFIFSG
Trigger: GCCACTAAAAATGAATGTGCATGGCGTCATTAACAT...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATACGACAAAAACGATGTaGCATCTGATCCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYTTKTM*HLIPSC
Trigger: ACAAGAAGGGATCAGATGCCACATCGTTTTTGTCGT...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp CCTGTCTATGGTATTTGTTGTAGCAGCCTGCAGCTCTCTATCACTCTTGTTTATATGAACAGTGTACCTTaGACTGGACTTTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: PVYGICCSSLQLSITLVYMNSVP*TGLSIL
Trigger: CAAGATGGAAAGTCCAGTCCAAGGTACACTGTTCAT...ATAAACAAGAGTGATAGAGAGCTGCAGGCTGCTACAACAAATACCATAGACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGTTGGTAACCTGCTGCTaGGTAACTAAGGCATCCCAC +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMLVTCC*VTKASH
Trigger: GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAA...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTTTCAAGTGCTGCAGGTaGGTATCTACCAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSFKCCR*VSTKGS
Trigger: TGAACCCTTGGTAGATACTCACCTGCAGCACTTGAA...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR TCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAGTTCAATCTGAAGACTaGATTGGGCTACCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELVQSED*IGLPCD
Trigger: ATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAAC...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp AACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCCCTTCTTGTTCAATCTaGAGACTGAATTGGGCTACC +
Preference number: 4 (lower is better)
Translates to: NRVQKSSCMEHGVILLHGPSCSI*RLNWAT
Trigger: GGTAGCCCAATTCAGTCTTCAGATTGAACAAGAAGG...GCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTACATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTGGTCTGGGCACTTCATaGTGGCATATATTCGAGTAC +
Preference number: 4 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSGLGTS*WHIFEY
Trigger: GTACTCGAATATATGCCAGCATGAAGTGCCCAGACC...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR GCA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGTGCATGACAAGCATCTaGAGAAGAGCTGACAATGGC +
Preference number: 4 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMCMTSI*RRADNG
Trigger: GCCATTGTCAGCTCTTCTGCAGATGCTTGTCATGCA...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATAGTCCTGAGCAGTTCTaGATGACAAGCATCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYSPEQF*MTSICR
Trigger: TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACT...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTGTCCAAAAATCCAGTTaGATGGAACATGGAGTTATA +
Preference number: 4 (lower is better)
Translates to: LFNLKTELGYPVMETSSAVQKSS*MEHGVI
Trigger: TATAACTCCATGTTCCATGCAACTGGATTTTTGGAC...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGCGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMRYFSF*LFFGSF
Trigger: AAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCG...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACCTGGGCACTTCATGCTaGCATATATTCGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDLGTSC*HIFEYC
Trigger: GCAGTACTCGAATATATGCCAGCATGAAGTGCCCAG...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGCTGACAATGGCATTCTaGGGGTCATCTTCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMLTMAF*GSSSGT
Trigger: TGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GCTATTAACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTAGCATTTTCGAGCTCCTaGACAGCTCTGGATCAGGTT +
Preference number: 4 (lower is better)
Translates to: AINRVQKSSCMEHGVILLAFSSS*TALDQV
Trigger: AACCTGATCCAGAGCTGTCCAGGAGCTCGAAAATGC...TAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTTAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAAATTGGCAATTATGAATaGCAGTGCATTAACCATTCA +
Preference number: 4 (lower is better)
Translates to: IESALLELGLPSIQNCEKIGNYE*QCINHS
Trigger: TGAATGGTTAATGCACTGCCATTCATAATTGCCAAT...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGGACCTCTCATGCATCTaGCCCCATAGAAACCATGAA +
Preference number: 4 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMDLSCI*PHRNHE
Trigger: TTCATGGTTTCTATGGGGCCAGATGCATGAGAGGTC...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp AATATCACATGCAAACATCATACCACACTCGTCCAGTTATTTCTTAGGGTTCTTCCACCATCCTTGATCTaGCAGGTATATAGACACTTC +
Preference number: 4 (lower is better)
Translates to: NITCKHHTTLVQLFLRVLPPSLI*QVYRHF
Trigger: GAAGTGTCTATATACCTGTCAGATCAAGGATGGTGG...AAGAACCCTAAGAAATAACTGGACGAGTGTGGTATGATGTTTGCATGTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp AATATCACATGCAAACATCATACCACACTCGTCCAGTTATTTCTTAGGGTTCTTCATATATTCGAGTACTaGAATAGCCCACGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: NITCKHHTTLVQLFLRVLHIFEY*NSPRGR
Trigger: TCTACCCCGTGGGCTATTGCAGTACTCGAATATATG...AAGAACCCTAAGAAATAACTGGACGAGTGTGGTATGATGTTTGCATGTGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp TTGTTCAATCTGAAGACTGAATTGGGCTACCCTGTGATGGAGACTTCAAGTGCTGTAATGAATATCACATaGAAACATCATACCACACTC +
Preference number: 4 (lower is better)
Translates to: LFNLKTELGYPVMETSSAVMNIT*KHHTTL
Trigger: GAGTGTGGTATGATGTTTGCATGTGATATTCATTAC...AGCACTTGAAGTCTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATTGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR GCA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTAACCCCTATTGCCCATaGTTTGACCTCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCNPYCP*FDLSCI
Trigger: GATGCATGAGAGGTCAAAGCATGGGCAATAGGGGTT...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACTCAGTTAACCCCTATTaGCCATGCTTTGACCTCTCA +
Preference number: 4 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDSVNPY*PCFDLS
Trigger: TGAGAGGTCAAAGCATGGGCAATAGGGGTTAACTGA...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTGTATATAGACACTTCTaGTCTGGGCACTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSVYRHF*SGHFML
Trigger: CAGCATGAAGTGCCCAGACCAGAAGTGTCTATATAC...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACAGTGTACCTTGGACTaGACTTTCCATCTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLQCTLD*TFHLEF
Trigger: AAACTCAAGATGGAAAGTCCAGTCCAAGGTACACTG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTATCAAAGATCTGTCTCTaGAAGGCTTCAAAGCTCATA +
Preference number: 4 (lower is better)
Translates to: SITLVYKRLKFTLPQAELSKICL*KASKLI
Trigger: TATGAGCTTTGAAGCCTTTCAGAGACAGATCTTTGA...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCATGGTTTCAGTGTACTaGGCTAAAAAGCACATTATC +
Preference number: 4 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTMVSVY*AKKHII
Trigger: GATAATGTGCTTTTTAGCTCAGTACACTGAAACCAT...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTACTAGAGTACATAGTGTaGAAAATACGGTTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLLEYIV*KIRFRQ
Trigger: TTGCCTGAACCGTATTTTTCACACTATGTACTCTAG...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTAAACGATGTGGCATCTaGTCCCTTCTTGTTCAATCT +
Preference number: 4 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCKRCGI*SLLVQS
Trigger: AGATTGAACAAGAAGGGATCAGATGCCACATCGTTT...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR TCA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTTTGTTTATAAGAGGCTaGAGTTTACTTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAILFIRG*SLLYLR
Trigger: CCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAA...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTATCATTTCTGTGTAAATaGCAGTATGCTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLSFLCK*QYAQAI
Trigger: AATGGCTTGAGCATACTGGCATTTACACAGAAATGA...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCGTAATGAATATCACATaGAAACATCATACCACACTC +
Preference number: 4 (lower is better)
Translates to: IGNYEWQCINHSILTTPSVMNIT*KHHTTL
Trigger: GAGTGTGGTATGATGTTTGCATGTGATATTCATTAC...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp CAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGTTAATGACGCCATaGACATTCATTTTTAGTGGC +
Preference number: 4 (lower is better)
Translates to: QGPKIQLHGTWSYIITWLMLMTP*TFIFSG
Trigger: GCCACTAAAAATGAATGTGCATGGCGTCATTAACAT...TAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp ATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTAAGCATTGGCAATTATGAATaGCAGTGCATTAACCATTCA +
Preference number: 4 (lower is better)
Translates to: ITLVYKRLKFTLPQAELSIGNYE*QCINHS
Trigger: TGAATGGTTAATGCACTGCCATTCATAATTGCCAAT...GCTTAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR TCA 90 bp TGGACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTTTGTTTATAAGAGGCTaGAGTTTACTTTACCTCAGG +
Preference number: 4 (lower is better)
Translates to: WTGLSILSLSRTLDFDDTLFIRG*SLLYLR
Trigger: CCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAA...AGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR GCA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGTCATTTCTGTGTAAATaGCAGTATGCTCAAGCCATT +
Preference number: 4 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMSFLCK*QYAQAI
Trigger: AATGGCTTGAGCATACTGGCATTTACACAGAAATGA...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp ACCACACTCGTCCAGTTATTTCTTAGGGTTCTTAACATGGAAGAGGATAAATATTTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 4 (lower is better)
Translates to: TTLVQLFLRVLNMEEDKYLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...ATATTTATCCTCTTCCATGTTAAGAACCCTAAGAAATAACTGGACGAGTGTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR GCA 90 bp TGGACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTTTACTTCTGAATTGCTaGCTTCTTTCATATACCCAA +
Preference number: 4 (lower is better)
Translates to: WTGLSILSLSRTLDFDDTLLLNC*LLSYTQ
Trigger: TTGGGTATATGAAAGAAGGCAGCAATTCAGAAGTAA...AGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGTCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp GTGAAAAATACGGTTCAGGCAATGATTATGTTAATGACGCCATGCACATTCATTCAGTTGCATGGAACATaGAGTTATATTATTACATGG +
Preference number: 4 (lower is better)
Translates to: VKNTVQAMIMLMTPCTFIQLHGT*SYIITW
Trigger: CCATGTAATAATATAACTCCATGTTCCATGCAACTG...AATGAATGTGCATGGCGTCATTAACATAATCATTGCCTGAACCGTATTTTTCAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CAA 72 bp ACTATAAAGTACCAATCCCATTTGTGTTGTCCTCAATaGGCAATTATGAATGGCAGTGCATTAACCATTCAA +
Preference number: 4 (lower is better)
Translates to: TIKYQSHLCCPQ*AIMNGSALTIQ
Trigger: TTGAATGGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGGTACTTTATAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
3UTR CAA 72 bp CAGATTTATTACTATAAAGTACCAATCCCATTTGTGTaGTCCTCAATTGGCAATTATGAATGGCAGTGCATT +
Preference number: 4 (lower is better)
Translates to: QIYYYKVPIPFV*SSIGNYEWQCI
Trigger: AATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTGGTACTTTATAGTAATAAATCTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CCA 90 bp GCTATTAACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACAGTTGCATGGAACATaGAGTTATATTATTACATGG +
Preference number: 4 (lower is better)
Translates to: AINRVQKSSCMEHGVILLQLHGT*SYIITW
Trigger: CCATGTAATAATATAACTCCATGTTCCATGCAACTG...TAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTTAATAGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CCA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTCAGTTGCATGGAACATaGAGTTATATTATTACATGG +
Preference number: 4 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCQLHGT*SYIITW
Trigger: CCATGTAATAATATAACTCCATGTTCCATGCAACTG...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS GCA 90 bp TTCTGGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTGCTGGACTaGAGCGGAGCCCGCGGCGAGGAAGCGAGGCCGTCCAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FWLFFGSFFILALLD*SGARGEEARPSSRL
Trigger: GAGCCTGCTGGACGGCCTCGCTTCCTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCCAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CCA 90 bp TCTCATTCTGGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCGGCGAGGAAGCGAGGCCGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: SHSGSSSGAFSSWPC*TAAEPAARKRGRPA
Trigger: TGCTGGACGGCCTCGCTTCCTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCCAGAATGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS GCA 90 bp ACTTCTCATTCTGGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTaGTGGACTGCAGCGGAGCCCGCGGCGAGGAAGCGAGGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: TSHSGSSSGAFSSWP*WTAAEPAARKRGRP
Trigger: TGGACGGCCTCGCTTCCTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCCAGAATGAGAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CCA 90 bp GCCGCTTTGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTGCTGGACTGC +
Preference number: 5 (lower is better)
Translates to: AALRSRRYFSRYFSF*LFFGSFFILALLDC
Trigger: GCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS-3UTR CAA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTC +
Preference number: 5 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLVALAA*RSRRYF
Trigger: GAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCAC...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp CCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCCTTTCCAGACAGCCCTaGGTAACCTGCTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: PIHIPPWAVLIRGQPEVALSRQP*VTCCWV
Trigger: TACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG...GGCTACCTCTGGCTGCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS TCA 90 bp CTTAGTTTTCTTCCCAAATGGTTCCTCAGCCCCAGTGCTGGGCCCTaGAATAGGCCCAGCTCCCTGTATAGTTCCCACAGAGCTGGCCAC +
Preference number: 5 (lower is better)
Translates to: LSFLPKWFLSPSAGP*NRPSSLYSSHRAGH
Trigger: GTGGCCAGCTCTGTGGGAACTATACAGGGAGCTGGGCCTATTTCAGGGCCCAGCACTGGGGCTGAGGAACCATTTGGGAAGAAAACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284290.8
ENST00000438907.3
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000530731.5
CDS-3UTR CAA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAAGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTC +
Preference number: 5 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKVALAA*RSRRYF
Trigger: GAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCAC...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp ATTGAATCTGCGCTCCTTGAACTTGGACTTCCCAGCATCCAGAACTGTGAGAAAGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTC +
Preference number: 5 (lower is better)
Translates to: IESALLELGLPSIQNCEKVALAA*RSRRYF
Trigger: GAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCAC...TTTCTCACAGTTCTGGATGCTGGGAAGTCCAAGTTCAAGGAGCGCAGATTCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGCCCTCACCAGACATaGAATCTGCGCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: APQVAAHLQVCTHQISPTGPHQT*NLRSLN
Trigger: GTTCAAGGAGCGCAGATTCAATGTCTGGTGAGGGCC...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS CCA 90 bp AGGTCGGTCGGTGATGATCTGGTTTTGCAGGGACTGGAGATACGCTaGGGTTGGTATGGATCAGCAAGAGGCTGCTGCTTCCAGTTTGTT +
Preference number: 5 (lower is better)
Translates to: RSVGDDLVLQGLEIR*GWYGSARGCCFQFV
Trigger: AACAAACTGGAAGCAGCAGCCTCTTGCTGATCCATACCAACCCCAGCGTATCTCCAGTCCCTGCAAAACCAGATCATCACCGACCGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438907.3
ENST00000452080.5
CDS CCA 90 bp AGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAGGATCCTaGAGAAAACAATTCCTTAAGTTCCACTGCTGCTCGGGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: RHKGCRLKLWEVQGS*RKQFLKFHCCSGVW
Trigger: CCAGACTCCCGAGCAGCAGTGGAACTTAAGGAATTGTTTTCTCCAGGATCCTTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS-3UTR CAA 90 bp CTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACAGGTCCAAAAATCCAGTaGCATGGAACATGGAGTTAT +
Preference number: 5 (lower is better)
Translates to: LHHSPAAPQVAAHLQVCTGPKIQ*HGTWSY
Trigger: ATAACTCCATGTTCCATGCAACTGGATTTTTGGACC...TGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACTTGCCCTCACCCTCATaGACACTGGATGTTGTCAAA +
Preference number: 5 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHLPSPS*TLDVVK
Trigger: TTTGACAACATCCAGTGTCAATGAGGGTGAGGGCAA...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS GCA 90 bp GACACTTCTGGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTaGAATAGCCCACGGGGTAGATGGCACTCTCATCATGAAAGCCAG +
Preference number: 5 (lower is better)
Translates to: DTSGLGTSCWHIFEY*NSPRGRWHSHHESQ
Trigger: CTGGCTTTCATGATGAGAGTGCCATCTACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACCAGAAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284290.8
ENST00000438907.3
ENST00000441174.8
ENST00000473629.6
ENST00000491010.2
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CCA 90 bp TTTCCCTATATGACCCCAAAGCCTGAACCCTTGATCACTCATTTGTaGGAGGAACTCATGGAACACAGGCAGGGCCAAGGCCTTGACTTG +
Preference number: 5 (lower is better)
Translates to: FPYMTPKPEPLITHL*EELMEHRQGQGLDL
Trigger: CAAGTCAAGGCCTTGGCCCTGCCTGTGTTCCATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCATATAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS-3UTR CAA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGTCAAACACCGTGGCCTaGGCCGCTTTGCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMSNTVA*AALRSR
Trigger: GCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTGA...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGGCCCTCACCAGACATaGAATCTGCGCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSGPHQT*NLRSLN
Trigger: GTTCAAGGAGCGCAGATTCAATGTCTGGTGAGGGCC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTGGTGCAGGGGCTGGGACTaGATATTCCTTGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: PSGSCPSPGLHTSNFTHWCRGWD*IFLELG
Trigger: TCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCA...CCAGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CTCCTGGACAGCTCTGGATCAGGTTGTGGATGGCTGGATGAGAAAATCCAAAAACTTTCCAGACAGCCCTaGGTAACCTGCTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LLDSSGSGCGWLDEKIQKLSRQP*VTCCWV
Trigger: TACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG...TTTTTGGATTTTCTCATCCAGCCATCCACAACCTGATCCAGAGCTGTCCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CCAATACACATACCCCCATGGGCTGTTCTAATTCGGGGGCAGCCAGAGGTAGCCAAGTACCAATCCCATTaGTGTTGTCCTCAATTGGCA +
Preference number: 5 (lower is better)
Translates to: PIHIPPWAVLIRGQPEVAKYQSH*CCPQLA
Trigger: TGCCAATTGAGGACAACACAAATGGGATTGGTACTT...GGCTACCTCTGGCTGCCCCCGAATTAGAACAGCCCATGGGGGTATGTGTATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp GCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGGTAAGAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: AAGEYLPRVHVSGTWAGKNLKTE*GYPVME
Trigger: CTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATT...CTTACCAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLNLKTE*GYPVME
Trigger: CTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATT...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGGCATCTGATCCCTTCTaGTTCAATCTGAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: LSRQPLVTCCWVTKASHRASDPF*FNLKTE
Trigger: TTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGC...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGGCCCTCACCAGACATaGAATCTGCGCTCCTTGAAC +
Preference number: 5 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLGPHQT*NLRSLN
Trigger: GTTCAAGGAGCGCAGATTCAATGTCTGGTGAGGGCC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GCTTCAAAGCTCATAGCTGCATCATTCTCCGGCAGCCCCTCAGGTAGCTGCCCAATCAAGAGTAGAAGTTaGTCAGAATCTCCCTATCTC +
Preference number: 5 (lower is better)
Translates to: ASKLIAASFSGSPSGSCPIKSRS*SESPYL
Trigger: GAGATAGGGAGATTCTGACAAACTTCTACTCTTGAT...TGGGCAGCTACCTGAGGGGCTGCCGGAGAATGATGCAGCTATGAGCTTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAAGTACCAATCCCATTaGTGTTGTCCTCAATTGGCA +
Preference number: 5 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHKYQSH*CCPQLA
Trigger: TGCCAATTGAGGACAACACAAATGGGATTGGTACTT...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS TCA 90 bp CTGTGGGAAGGAGCTGCAGCCTGTACTTCCCCTTCAGTTAGAGCCTaGAGCTGGAGGAGCTTCTTTAGCAAGTACCTTCTTTCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: LWEGAAACTSPSVRA*SWRSFFSKYLLSSF
Trigger: AAAAGAAGAAAGAAGGTACTTGCTAAAGAAGCTCCTCCAGCTTCAGGCTCTAACTGAAGGGGAAGTACAGGCTGCAGCTCCTTCCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000530731.5
CDS GCA 90 bp ATACAGAAAATAGTAATAATCAGCGAACAGTGGAGTCCTGGCTCTTaGTTACCTGTCCAGAGGGCTAAGGGGGCCAATACTGAGCCCTAC +
Preference number: 5 (lower is better)
Translates to: IQKIVIISEQWSPGS*LPVQRAKGANTEPY
Trigger: GTAGGGCTCAGTATTGGCCCCCTTAGCCCTCTGGACAGGTAAGCAAGAGCCAGGACTCCACTGTTCGCTGATTATTACTATTTTCTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491010.2
ENST00000531033.1
CDS CCA 90 bp TTGCTGTCATGGTACATACAGAAAATAGTAATAATCAGCGAACAGTaGAGTCCTGGCTCTTGCTTACCTGTCCAGAGGGCTAAGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLSWYIQKIVIISEQ*SPGSCLPVQRAKGA
Trigger: GGCCCCCTTAGCCCTCTGGACAGGTAAGCAAGAGCCAGGACTCCACTGTTCGCTGATTATTACTATTTTCTGTATGTACCATGACAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491010.2
ENST00000531033.1
CDS-3UTR CAA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTC +
Preference number: 5 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMVALAA*RSRRYF
Trigger: GAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCAC...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp TCCCTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACATCAAGAGTAGAAGTTaGTCAGAATCTCCCTATCTC +
Preference number: 5 (lower is better)
Translates to: SLSRQPLVTCCWVTKASHIKSRS*SESPYL
Trigger: GAGATAGGGAGATTCTGACAAACTTCTACTCTTGAT...GTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CATGGGCTGGTAAGAAGACACAAAGGCTGCAGGCTGAAGCTCTGGGAGGTCCAAACTGGACTTTCCATCTaGAGTTTAAGCAGAACATTG +
Preference number: 5 (lower is better)
Translates to: HGLVRRHKGCRLKLWEVQTGLSI*SLSRTL
Trigger: CAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT...TTGGACCTCCCAGAGCTTCAGCCTGCAGCCTTTGTGTCTTCTTACCAGCCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CTTTCCAGACAGCCCTTGGTAACCTGCTGCTGGGTAACTAAGGCATCCCACAGGCCAATCCCATTTGTGTaGTCCTCAATTGGCAATTAT +
Preference number: 5 (lower is better)
Translates to: LSRQPLVTCCWVTKASHRPIPFV*SSIGNY
Trigger: ATAATTGCCAATTGAGGACAACACAAATGGGATTGG...CCTGTGGGATGCCTTAGTTACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGCGATCTCCTGACCTCTaGATCCACCCGCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMRSPDL*IHPPQP
Trigger: AGGCTGAGGCGGGTGGATCAAGAGGTCAGGAGATCG...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp ATTCGGGGGCAGCCAGAGGTAGCCAAGAACTCTAAGTCCAGATTCCTTTCACCTGCATCTGATCCCTTCTaGTTCAATCTGAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: IRGQPEVAKNSKSRFLSPASDPF*FNLKTE
Trigger: TTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGC...AGGTGAAAGGAATCTGGACTTAGAGTTCTTGGCTACCTCTGGCTGCCCCCGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTTGCAGGGGCTGGGACTaGATATTCCTTGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSCRGWD*IFLELG
Trigger: TCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCA...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCATGCAGGGGCTGGGACTaGATATTCCTTGAATTAGGA +
Preference number: 5 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSCRGWD*IFLELG
Trigger: TCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCA...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GCCCCTCAGGTAGCTGCCCATCTCCAGGTTTGCACACATCAAATTTCACCCACTTTGTGTTGTCCTCAATaGGCAATTATGAATGGCAGT +
Preference number: 5 (lower is better)
Translates to: APQVAAHLQVCTHQISPTLCCPQ*AIMNGS
Trigger: ACTGCCATTCATAATTGCCAATTGAGGACAACACAA...AGTGGGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCAGCTACCTGAGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS GCA 90 bp TATTCCCTGCACAGTAAACTTTCCCCTGGTGTTCTGCTCCAGTCTTaGTTAGGTTACAGAATGAGATACCTTAGTTTCTGGGGTACCCTG +
Preference number: 5 (lower is better)
Translates to: YSLHSKLSPGVLLQS*LGYRMRYLSFWGTL
Trigger: CAGGGTACCCCAGAAACTAAGGTATCTCATTCTGTAACCTAAGCAAGACTGGAGCAGAACACCAGGGGAAAGTTTACTGTGCAGGGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS-3UTR CAA 90 bp TCAGCTCCAGCTGGAAGCAGGTTAGGCATTAGTTTCCCCATAGTAGTGCTTATATGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 5 (lower is better)
Translates to: SAPAGSRLGISFPIVVLICPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...TATAAGCACTACTATGGGGAAACTAATGCCTAACCTGCTTCCAGCTGGAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp GGAGGTCCAAGGATCCTGGCAGAAGGGGATCATTCTGATCTTCATCAAAGATCTGATGAACAGTGTACCTaGGACTGGACTTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: GGPRILAEGDHSDLHQRSDEQCT*DWTFHL
Trigger: AAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATC...AGATCTTTGATGAAGATCAGAATGATCCCCTTCTGCCAGGATCCTTGGACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp AATATCACATGCAAACATCATACCACACTCGTCCAGTTATTTCTTAGGGTTCTTCGATCTCCTGACCTCTaGATCCACCCGCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: NITCKHHTTLVQLFLRVLRSPDL*IHPPQP
Trigger: AGGCTGAGGCGGGTGGATCAAGAGGTCAGGAGATCG...AAGAACCCTAAGAAATAACTGGACGAGTGTGGTATGATGTTTGCATGTGATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp CAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATGGGCTGCAGAGAAACACTATTTaGCTGAACCATTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: QVLQVSIYQGFMCQVHGLQRNTI*LNHSLD
Trigger: GTCAAGTGAATGGTTCAGCAAAATAGTGTTTCTCTG...CAGCCCATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR CAA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACAGCATCTGATCCCTTCTaGTTCAATCTGAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTASDPF*FNLKTE
Trigger: TTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGC...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000529543.5
ENST00000530731.5
CDS-3UTR CAA 90 bp ATCTGCAGAAGAGCTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCGATGAACAGTGTACCTaGGACTGGACTTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: ICRRADNGILGVIFRNNFDEQCT*DWTFHL
Trigger: AAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATC...GAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAGCTCTTCTGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAGATGAACAGTGTACCTaGGACTGGACTTTCCATCTT +
Preference number: 5 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPDEQCT*DWTFHL
Trigger: AAGATGGAAAGTCCAGTCCAAGGTACACTGTTCATC...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCACTTTACAAGGAACGTaGGCTCCCCTGAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTTLQGT*APLRTS
Trigger: GGAAGTCCTCAGGGGAGCCAACGTTCCTTGTAAAGT...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS CCA 90 bp TCCTGGAGAAAACAATTCCTTAAGTTCCACTGCTGCTCGGGAGTCTaGGCAGACTGTTTTGGTCAGACATATACATGTCCTTTCAATCAA +
Preference number: 5 (lower is better)
Translates to: SWRKQFLKFHCCSGV*ADCFGQTYTCPFNQ
Trigger: TTGATTGAAAGGACATGTATATGTCTGACCAAAACAGTCTGCCCAGACTCCCGAGCAGCAGTGGAACTTAAGGAATTGTTTTCTCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS-3UTR CAA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGCATCTGATCCCTTCTaGTTCAATCTGAAGACTGAA +
Preference number: 5 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLASDPF*FNLKTE
Trigger: TTCAGTCTTCAGATTGAACAAGAAGGGATCAGATGC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CCTTGTAACAGATTGATGCCTGAGAAAAAGTCAATCTACCCGTCCACTCCTCCAGGTCCAAAAATCCAGTaGCATGGAACATGGAGTTAT +
Preference number: 5 (lower is better)
Translates to: PCNRLMPEKKSIYPSTPPGPKIQ*HGTWSY
Trigger: ATAACTCCATGTTCCATGCAACTGGATTTTTGGACC...TGGAGGAGTGGACGGGTAGATTGACTTTTTCTCAGGCATCAATCTGTTACAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp TCAAGAGTAGAAGTTTGTCAGAATCTCCCTATCTCCCTCGTTAGTCAGCTGCTGGGTCCAAAAATCCAGTaGCATGGAACATGGAGTTAT +
Preference number: 5 (lower is better)
Translates to: SRVEVCQNLPISLVSQLLGPKIQ*HGTWSY
Trigger: ATAACTCCATGTTCCATGCAACTGGATTTTTGGACC...CAGCAGCTGACTAACGAGGGAGATAGGGAGATTCTGACAAACTTCTACTCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACATGCTTTCCAGACAGCCCTaGGTAACCTGCTGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GLSILSLSRTLDFDDTDMLSRQP*VTCCWV
Trigger: TACCCAGCAGCAGGTTACCAAGGGCTGTCTGGAAAG...CATGTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp CCCCATAGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGACCAATCCCATTTGTGTaGTCCTCAATTGGCAATTAT +
Preference number: 5 (lower is better)
Translates to: PHSSAYSPEQFCMTSICRPIPFV*SSIGNY
Trigger: ATAATTGCCAATTGAGGACAACACAAATGGGATTGG...TCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACTATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR CAA 90 bp GAGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACAGAACCTTGTAACAGATaGATGCCTGAGAAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: ETSSAAGEYLPRVHVSGTEPCNR*MPEKKS
Trigger: TGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTC...TGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS-3UTR CAA 90 bp AGCCTGGGTTGCAGGGGCTGGGACTTGATATTCCTTGAATTAGGATCACAATCAGAACCTTGTAACAGATaGATGCCTGAGAAAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SLGCRGWDLIFLELGSQSEPCNR*MPEKKS
Trigger: TGACTTTTTCTCAGGCATCAATCTGTTACAAGGTTC...TGATTGTGATCCTAATTCAAGGAATATCAAGTCCCAGCCCCTGCAACCCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTCCTATTGCCCATGCTTaGACCTCTCATGCATCTGGC +
Preference number: 5 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAIPIAHA*TSHASG
Trigger: GCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGG...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp AACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCCCTATTGCCCATGCTTaGACCTCTCATGCATCTGGC +
Preference number: 5 (lower is better)
Translates to: NRVQKSSCMEHGVILLHGPIAHA*TSHASG
Trigger: GCCAGATGCATGAGAGGTCAAAGCATGGGCAATAGG...GCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp AGACTTCAAGTGCTGCAGGTGAGTATCTACCAAGGGTTCATGTGTCAGGTACATACCCTTGAGAGTTATTaGATGCATTTTCGAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RLQVLQVSIYQGFMCQVHTLESY*MHFRAP
Trigger: AGGAGCTCGAAAATGCATCAAATAACTCTCAAGGGT...ATGTACCTGACACATGAACCCTTGGTAGATACTCACCTGCAGCACTTGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530731.5
CDS TCA 90 bp CTGACAATGGCATTCTGGGGGTCATCTTCAGGAACAATTTCAAACTaGGAAAGACAAACGAGCAATGAGATCAATCCTCAAGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: LTMAFWGSSSGTISN*ERQTSNEINPQEGR
Trigger: CCTTCCTTCTTGAGGATTGATCTCATTGCTCGTTTGTCTTTCTCAGTTTGAAATTGTTCCTGAAGATGACCCCCAGAATGCCATTGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531033.1
CDS-3UTR CAA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGTGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 5 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMCPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp CAATCCCATTTGTGTTGTCCTCAATTGGCAATTATGAATGGCAGTGCATTAACCAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QSHLCCPQLAIMNGSALTNLKTE*GYPVME
Trigger: CTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATT...GGTTAATGCACTGCCATTCATAATTGCCAATTGAGGACAACACAAATGGGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp AGTAGTGCTTATAGTCCTGAGCAGTTCTGCATGACAAGCATCTGCAGAAGAGCTAGTCCCCTTCCCGATTaGCTATTATACAAAGTTTGT +
Preference number: 5 (lower is better)
Translates to: SSAYSPEQFCMTSICRRASPLPD*LLYKVC
Trigger: ACAAACTTTGTATAATAGCAAATCGGGAAGGGGACT...AGCTCTTCTGCAGATGCTTGTCATGCAGAACTGCTCAGGACTATAAGCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284290.8
CDS TCA 90 bp GTCATCTTCAGGAACAATTTCAAACTGAGAAAGACAAACGAGCAATaGGATCAATCCTCAAGAAGGAAGGAGAGAGGGGCATACTACTCT +
Preference number: 5 (lower is better)
Translates to: VIFRNNFKLRKTNEQ*DQSSRRKERGAYYS
Trigger: AGAGTAGTATGCCCCTCTCTCCTTCCTTCTTGAGGATTGATCTCATTGCTCGTTTGTCTTTCTCAGTTTGAAATTGTTCCTGAAGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531033.1
CDS-3UTR CAA 90 bp TCTATCACTCTTGTTTATAAGAGGCTGAAGTTTACTTTACCTCAGGCAGAGCTATGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 5 (lower is better)
Translates to: SITLVYKRLKFTLPQAELCPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...TAGCTCTGCCTGAGGTAAAGTAAACTTCAGCCTCTTATAAACAAGAGTGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GCTATTAACAGGGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTAACTTTACAAGGAACGTaGGCTCCCCTGAGGACTTCC +
Preference number: 5 (lower is better)
Translates to: AINRVQKSSCMEHGVILLTLQGT*APLRTS
Trigger: GGAAGTCCTCAGGGGAGCCAACGTTCCTTGTAAAGT...TAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACCCTGTTAATAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp ACTGGACTTTCCATCTTGAGTTTAAGCAGAACATTGGATTTTGATGATACTGACTGCCCATCTCCAGGTTaGCACACATCAAATTTCACC +
Preference number: 5 (lower is better)
Translates to: TGLSILSLSRTLDFDDTDCPSPG*HTSNFT
Trigger: GGTGAAATTTGATGTGTGCAAACCTGGAGATGGGCA...GTCAGTATCATCAAAATCCAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTAATCTGAAGACTGAATaGGGCTACCCTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCNLKTE*GYPVME
Trigger: CTCCATCACAGGGTAGCCCAATTCAGTCTTCAGATT...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp ATTGGCAATTATGAATGGCAGTGCATTAACCATTCAATTCTCACCACTCCATCCACTGGACTTTCCATCTaGAGTTTAAGCAGAACATTG +
Preference number: 5 (lower is better)
Translates to: IGNYEWQCINHSILTTPSTGLSI*SLSRTL
Trigger: CAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT...GGATGGAGTGGTGAGAATTGAATGGTTAATGCACTGCCATTCATAATTGCCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp GTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTAACAGGGTCTTGTGTTGTCCTCAATaGGCAATTATGAATGGCAGT +
Preference number: 5 (lower is better)
Translates to: VEVLGDRVNLYLNAINRVLCCPQ*AIMNGS
Trigger: ACTGCCATTCATAATTGCCAATTGAGGACAACACAA...GACCCTGTTAATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp CTCCAGGAACCTAGAGTACATAGTGTGAAAAATACGGTTCAGGCAATGATTATGCAGAGAAACACTATTTaGCTGAACCATTCACTTGAC +
Preference number: 5 (lower is better)
Translates to: LQEPRVHSVKNTVQAMIMQRNTI*LNHSLD
Trigger: GTCAAGTGAATGGTTCAGCAAAATAGTGTTTCTCTG...CATAATCATTGCCTGAACCGTATTTTTCACACTATGTACTCTAGGTTCCTGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284290.8
ENST00000441174.8
CDS-3UTR CAA 90 bp ACAGGTAGTGTTGAGGTGTTAGGTGATAGAGTAAACCTCTACCTTAATGCTATTACTGGACTTTCCATCTaGAGTTTAAGCAGAACATTG +
Preference number: 5 (lower is better)
Translates to: TGSVEVLGDRVNLYLNAITGLSI*SLSRTL
Trigger: CAATGTTCTGCTTAAACTCAAGATGGAAAGTCCAGT...AATAGCATTAAGGTAGAGGTTTACTCTATCACCTAACACCTCAACACTACCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000529543.5
CDS-3UTR CAA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTACTTGCAAACTGTCCTaGAAGCATGTGAAAAGGAGT +
Preference number: 5 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSTCKLS*KHVKRS
Trigger: ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGT...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CAA 90 bp GTGTATGTATTTATATCCACTTGCAAACTGTCCTTGAAGCATGTGAAAAGGAGTATCAAGAGTAGAAGTTaGTCAGAATCTCCCTATCTC +
Preference number: 5 (lower is better)
Translates to: VYVFISTCKLSLKHVKRSIKSRS*SESPYL
Trigger: GAGATAGGGAGATTCTGACAAACTTCTACTCTTGAT...ACTCCTTTTCACATGCTTCAAGGACAGTTTGCAAGTGGATATAAATACATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CAA 90 bp GGTCCAAAAATCCAGTTGCATGGAACATGGAGTTATATTATTACATGGCTAATGTTCAGAACTTCCAGTTaGTTGTTCTCTTTGCCTTTT +
Preference number: 5 (lower is better)
Translates to: GPKIQLHGTWSYIITWLMFRTSS*LFSLPF
Trigger: AAAAGGCAAAGAGAACAACAAACTGGAAGTTCTGAA...CATTAGCCATGTAATAATATAACTCCATGTTCCATGCAACTGGATTTTTGGACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS-3UTR CAA 90 bp ACTAAGTCTGTTATAGAGTATGGGACTAACCCCCAATTATATGTGAATTTGTGTAGAACTTCCAGTTTGTaGTTCTCTTTGCCTTTTTCT +
Preference number: 5 (lower is better)
Translates to: TKSVIEYGTNPQLYVNLCRTSSL*FSLPFS
Trigger: AGAAAAAGGCAAAGAGAACAACAAACTGGAAGTTCT...ACACAAATTCACATATAATTGGGGGTTAGTCCCATACTCTATAACAGACTTAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS GCA 72 bp TTCTTCGGGAGCTTTTTCATCCTGGCCTTGCTGGACTaGAGCGGAGCCCGCGGCGAGGAAGCGAGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: FFGSFFILALLD*SGARGEEARPS
Trigger: GGACGGCCTCGCTTCCTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CCA 72 bp GGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTGCTaGACTGCAGCGGAGCCCGCGGCGAGGAAGCGAGGC +
Preference number: 6 (lower is better)
Translates to: GSSSGAFSSWPC*TAAEPAARKRG
Trigger: GCCTCGCTTCCTCGCCGCGGGCTCCGCTGCAGTCCAGCAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CAA 72 bp GGGCTCCCGGCGCCTCCCAGCACTTCCGTGTCTGTCTaGGAAGTAAGCCCTTCCCGGAAGTTACGTCCCGGT +
Preference number: 6 (lower is better)
Translates to: GLPAPPSTSVSV*EVSPSRKLRPG
Trigger: ACCGGGACGTAACTTCCGGGAAGGGCTTACTTCCAAGACAGACACGGAAGTGCTGGGAGGCGCCGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473629.6
CDS CCA 72 bp TGGGGAACACAGGCCGTCCTGAGGGATCCAGGGCAATaGGCTGAACCAGCTTGCGAGCACCTCCCGCCATTT +
Preference number: 6 (lower is better)
Translates to: WGTQAVLRDPGQ*AEPACEHLPPF
Trigger: AAATGGCGGGAGGTGCTCGCAAGCTGGTTCAGCCCATTGCCCTGGATCCCTCAGGACGGCCTGTGTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS CAA 72 bp AAGCCAGGTCGGTCGGTGATGATAAACACCGTGGCCTaGGCCGCTTTGCGCAGCCGCAGGTACTTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: KPGRSVMINTVA*AALRSRRYFSR
Trigger: CCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTATCATCACCGACCGACCTGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531667.5
CDS CCA 72 bp CCCCCAGGCTATATACTGTTAGACCCCCTAGTCCGATaGGGAACACAGGCCGTCCTGAGGGATCCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: PPGYILLDPLVR*GTQAVLRDPGQ
Trigger: TTGCCCTGGATCCCTCAGGACGGCCTGTGTTCCCCATCGGACTAGGGGGTCTAACAGTATATAGCCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS CAA 72 bp CGGTCGGTGATGATAAACACCGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCA +
Preference number: 6 (lower is better)
Translates to: RSVMINTVALAA*RSRRYFSRYFS
Trigger: TGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTATCATCACCGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531667.5
CDS CAA 90 bp AAGCCAGGTCGGTCGGTGATGATAAACACCGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCATTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: KPGRSVMINTVALAA*RSRRYFSRYFSFWL
Trigger: GAGCCAGAATGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTATCATCACCGACCGACCTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531667.5
CDS TCA 72 bp AACACAGGCCGTCCTGAGGGATCCAGGGCAATGGGCTaGACCAGCTTGCGAGCACCTCCCGCCATTTTCTTT +
Preference number: 6 (lower is better)
Translates to: NTGRPEGSRAMG*TSLRAPPAIFF
Trigger: AAAGAAAATGGCGGGAGGTGCTCGCAAGCTGGTTCAGCCCATTGCCCTGGATCCCTCAGGACGGCCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS GCA 72 bp GTCCTGAGGGATCCAGGGCAATGGGCTGAACCAGCTTaGGAGCACCTCCCGCCATTTTCTTTTTCTTGCATG +
Preference number: 6 (lower is better)
Translates to: VLRDPGQWAEPA*EHLPPFSFSCM
Trigger: CATGCAAGAAAAAGAAAATGGCGGGAGGTGCTCGCAAGCTGGTTCAGCCCATTGCCCTGGATCCCTCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441174.8
CDS CCA 72 bp CGCAGCCGCAGGTACTTCAGCCGGTACTTCTCATTCTaGCTCTTCTTCGGGAGCTTTTTCATCCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: RSRRYFSRYFSF*LFFGSFFILAL
Trigger: CAAGGCCAGGATGAAAAAGCTCCCGAAGAAGAGCCAGAATGAGAAGTACCGGCTGAAGTACCTGCGGCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS CAA 72 bp ATAGCAGCATTTTCAAACACCGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCA +
Preference number: 6 (lower is better)
Translates to: IAAFSNTVALAA*RSRRYFSRYFS
Trigger: TGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATGCTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
CDS CAA 72 bp TCATCACAAATAGCAGCATTTTCAAACACCGTGGCCTaGGCCGCTTTGCGCAGCCGCAGGTACTTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: SSQIAAFSNTVA*AALRSRRYFSR
Trigger: CCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATGCTGCTATTTGTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
CDS CCA 72 bp GGTGATGATCTGGTTTTGCAGGGACTGGAGATACGCTaGGGTTGGTATGGATCAGCAAGAGGCTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: GDDLVLQGLEIR*GWYGSARGCCF
Trigger: GAAGCAGCAGCCTCTTGCTGATCCATACCAACCCCAGCGTATCTCCAGTCCCTGCAAAACCAGATCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000438907.3
ENST00000452080.5
CDS CCA 72 bp ATGACCCCAAAGCCTGAACCCTTGATCACTCATTTGTaGGAGGAACTCATGGAACACAGGCAGGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: MTPKPEPLITHL*EELMEHRQGQG
Trigger: GCCTTGGCCCTGCCTGTGTTCCATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CAA 90 bp TCATCACAAATAGCAGCATTTTCAAACACCGTGGCCTTGGCCGCTTaGCGCAGCCGCAGGTACTTCAGCCGGTACTTCTCATTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: SSQIAAFSNTVALAA*RSRRYFSRYFSFWL
Trigger: GAGCCAGAATGAGAAGTACCGGCTGAAGTACCTGCGGCTGCGCAAAGCGGCCAAGGCCACGGTGTTTGAAAATGCTGCTATTTGTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000529543.5
ENST00000530731.5
CDS CCA 72 bp GATCTGGTTTTGCAGGGACTGGAGATACGCTGGGGTTaGTATGGATCAGCAAGAGGCTGCTGCTTCCAGTTT +
Preference number: 6 (lower is better)
Translates to: DLVLQGLEIRWG*YGSARGCCFQF
Trigger: AAACTGGAAGCAGCAGCCTCTTGCTGATCCATACCAACCCCAGCGTATCTCCAGTCCCTGCAAAACCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000438907.3
ENST00000452080.5
CDS CAA 90 bp AGTTTTCCCTATATGACCCCAAAGCCTGAACCCTTGATCACTCATTaGTGGGAGGAACTCATGGAACACAGGCAGGGCCAAGGCCTTGAC +
Preference number: 6 (lower is better)
Translates to: SFPYMTPKPEPLITH*WEELMEHRQGQGLD
Trigger: GTCAAGGCCTTGGCCCTGCCTGTGTTCCATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCATATAGGGAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS TCA 72 bp GGAGCTGCAGCCTGTACTTCCCCTTCAGTTAGAGCCTaGAGCTGGAGGAGCTTCTTTAGCAAGTACCTTCTT +
Preference number: 6 (lower is better)
Translates to: GAAACTSPSVRA*SWRSFFSKYLL
Trigger: AAGAAGGTACTTGCTAAAGAAGCTCCTCCAGCTTCAGGCTCTAACTGAAGGGGAAGTACAGGCTGCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284290.8
ENST00000441174.8
ENST00000452080.5
ENST00000473629.6
ENST00000530731.5
CDS GCA 72 bp GGTCTGGGCACTTCATGCTGGCATATATTCGAGTACTaGAATAGCCCACGGGGTAGATGGCACTCTCATCAT +
Preference number: 6 (lower is better)
Translates to: GLGTSCWHIFEY*NSPRGRWHSHH
Trigger: ATGATGAGAGTGCCATCTACCCCGTGGGCTATTGCAGTACTCGAATATATGCCAGCATGAAGTGCCCAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000284290.8
ENST00000438907.3
ENST00000441174.8
ENST00000473629.6
ENST00000491010.2
ENST00000529543.5
ENST00000530731.5
ENST00000531667.5
CDS GCA 72 bp ATAGTAATAATCAGCGAACAGTGGAGTCCTGGCTCTTaGTTACCTGTCCAGAGGGCTAAGGGGGCCAATACT +
Preference number: 6 (lower is better)
Translates to: IVIISEQWSPGS*LPVQRAKGANT
Trigger: AGTATTGGCCCCCTTAGCCCTCTGGACAGGTAAGCAAGAGCCAGGACTCCACTGTTCGCTGATTATTACTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491010.2
ENST00000531033.1
CDS CAA 72 bp GAACTCATGGAACACAGGCAGGGCCAAGGCCTTGACTaGACCCCACTGACTTCACTTGAAATGTTATTCCCT +
Preference number: 6 (lower is better)
Translates to: ELMEHRQGQGLD*TPLTSLEMLFP
Trigger: AGGGAATAACATTTCAAGTGAAGTCAGTGGGGTCAAGTCAAGGCCTTGGCCCTGCCTGTGTTCCATGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CAA 72 bp TATATGACCCCAAAGCCTGAACCCTTGATCACTCATTaGTGGGAGGAACTCATGGAACACAGGCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: YMTPKPEPLITH*WEELMEHRQGQ
Trigger: TTGGCCCTGCCTGTGTTCCATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS GCA 72 bp GAGATACGCTGGGGTTGGTATGGATCAGCAAGAGGCTaGTGCTTCCAGTTTGTTGTTCTCTTTGCCTTTTTC +
Preference number: 6 (lower is better)
Translates to: EIRWGWYGSARG*CFQFVVLFAFF
Trigger: GAAAAAGGCAAAGAGAACAACAAACTGGAAGCAGCAGCCTCTTGCTGATCCATACCAACCCCAGCGTATCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000438907.3
ENST00000452080.5
CDS CAA 72 bp CAGAGTTTTCCCTATATGACCCCAAAGCCTGAACCCTaGATCACTCATTTGTGGGAGGAACTCATGGAACAC +
Preference number: 6 (lower is better)
Translates to: QSFPYMTPKPEP*ITHLWEELMEH
Trigger: GTGTTCCATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCATATAGGGAAAACTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CAA 72 bp AGTTCCACTGCTGCTCGGGAGTCTGGGCAGACTGTTTaGGTCAGACATATACATGTCCTTTCAATCAATTCC +
Preference number: 6 (lower is better)
Translates to: SSTAARESGQTV*VRHIHVLSINS
Trigger: GGAATTGATTGAAAGGACATGTATATGTCTGACCAAAACAGTCTGCCCAGACTCCCGAGCAGCAGTGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CCA 72 bp AAACAATTCCTTAAGTTCCACTGCTGCTCGGGAGTCTaGGCAGACTGTTTTGGTCAGACATATACATGTCCT +
Preference number: 6 (lower is better)
Translates to: KQFLKFHCCSGV*ADCFGQTYTCP
Trigger: AGGACATGTATATGTCTGACCAAAACAGTCTGCCCAGACTCCCGAGCAGCAGTGGAACTTAAGGAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CAA 90 bp AATTCCTTAAGTTCCACTGCTGCTCGGGAGTCTGGGCAGACTGTTTaGGTCAGACATATACATGTCCTTTCAATCAATTCCTTAACACCC +
Preference number: 6 (lower is better)
Translates to: NSLSSTAARESGQTV*VRHIHVLSINSLTP
Trigger: GGGTGTTAAGGAATTGATTGAAAGGACATGTATATGTCTGACCAAAACAGTCTGCCCAGACTCCCGAGCAGCAGTGGAACTTAAGGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS TCA 72 bp TTTAACCCAGAGTTTTCCCTATATGACCCCAAAGCCTaGACCCTTGATCACTCATTTGTGGGAGGAACTCAT +
Preference number: 6 (lower is better)
Translates to: FNPEFSLYDPKA*TLDHSFVGGTH
Trigger: ATGAGTTCCTCCCACAAATGAGTGATCAAGGGTTCAGGCTTTGGGGTCATATAGGGAAAACTCTGGGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491010.2
CDS CAA 72 bp GAAGTCCAGTTTCCTGTGGTAGCCTTTAGAACCACTTaGGGGCTTCCAGTTTGTTGTTCTCTTTGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: EVQFPVVAFRTT*GLPVCCSLCLF
Trigger: AAAAAGGCAAAGAGAACAACAAACTGGAAGCCCCAAAGTGGTTCTAAAGGCTACCACAGGAAACTGGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473629.6
CDS TCA 72 bp GCTTTTCTCAAGGGAATGAATTTGATCACACTTACTTaGTGCATTTTCGAGCTCCTGGACAGCTCTGGATCA +
Preference number: 6 (lower is better)
Translates to: AFLKGMNLITLT*CIFELLDSSGS
Trigger: TGATCCAGAGCTGTCCAGGAGCTCGAAAATGCATCAAGTAAGTGTGATCAAATTCATTCCCTTGAGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491010.2
ENST00000531033.1
CDS TCA 72 bp CAGTTCTACCCTTCTTGGTTGACAGCTTTCCAAAAGTaGGCGTTTAATTTGTTGTGTACCTTTCCAATCCAC +
Preference number: 6 (lower is better)
Translates to: QFYPSWLTAFQK*AFNLLCTFPIH
Trigger: GTGGATTGGAAAGGTACACAACAAATTAAACGCTCACTTTTGGAAAGCTGTCAACCAAGAAGGGTAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531033.1
CDS TCA 72 bp AAGTCCTTTGACTGTTTCAGTTCTACCCTTCTTGGTTaGCAGCTTTCCAAAAGTGAGCGTTTAATTTGTTGT +
Preference number: 6 (lower is better)
Translates to: KSFDCFSSTLLG*QLSKSERLICC
Trigger: ACAACAAATTAAACGCTCACTTTTGGAAAGCTGTCAACCAAGAAGGGTAGAACTGAAACAGTCAAAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531033.1