RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBP (Homo sapiens)

Ensembl gene IDs: ENSG00000112592

Ensembl transcript IDs: ENST00000230354.10, ENST00000392092.7, ENST00000421512.5, ENST00000423353.1, ENST00000446829.1, ENST00000540980.5, ENST00000616883.4, ENST00000636632.1

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACT +
Preference number: 1 (lower is better)
Translates to: GVLSAQIMPLPGIPR*ALTEGHHLVPHPAT
Trigger: AGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR GCA 90 bp TTCCCGGCATCCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTaGCACACCCTGCAACTCAACATCCATCTTCTCACAACACCACCA +
Preference number: 1 (lower is better)
Translates to: FPASRGGHLQKGITW*HTLQLNIHLLTTPP
Trigger: TGGTGGTGTTGTGAGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR GCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTaGAACTCAACATCCATCTTCTCACAACACCACCATTTAAAGGTA +
Preference number: 1 (lower is better)
Translates to: PAVGTYRRASPGATP*NSTSIFSQHHHLKV
Trigger: TACCTTTAAATGGTGGTGTTGTGAGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTA +
Preference number: 1 (lower is better)
Translates to: SFSLTHIFCPAILER*NVSGTEITPRSYKL
Trigger: TAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 2 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 2 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 2 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 2 (lower is better)
Translates to: TYRRASPGATPCNSTSIFKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGACCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: NTYILSCNTGEVECVWHRPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: IFCPAILERWNVSGTEITPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAACCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 2 (lower is better)
Translates to: YILSCNTGEVECVWHRNNPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 2 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 2 (lower is better)
Translates to: NTYILSCNTGEVECVWHRKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: AILERWNVSGTEITPRSYARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: INTYILSCNTGEVECVWHNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: LTHIFCPAILERWNVSGTNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR TCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 2 (lower is better)
Translates to: INTYILSCNTGEVECVWHDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCCCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 2 (lower is better)
Translates to: SLTHIFCPAILERWNVSGPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACACCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 2 (lower is better)
Translates to: LTHIFCPAILERWNVSGTPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: INTYILSCNTGEVECVWHARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAGCCTCCCAAGTAGCTaGGACTACAGACATCCACTA +
Preference number: 2 (lower is better)
Translates to: NTYILSCNTGEVECVWHRSLPSS*DYRHPL
Trigger: TAGTGGATGTCTGTAGTCCCAGCTACTTGGGAGGCT...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 2 (lower is better)
Translates to: AILERWNVSGTEITPRSYVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR-3UTR TCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: SLTHIFCPAILERWNVSGLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR-3UTR TCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGGAGGCAAGGGTACATaGGAGCCATTACGTCGTCTT +
Preference number: 2 (lower is better)
Translates to: SFSLTHIFCPAILERWNVGGKGT*EPLRRL
Trigger: AAGACGACGTAATGGCTCTCATGTACCCTTGCCTCC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR-3UTR GCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 2 (lower is better)
Translates to: HSFSLTHIFCPAILERWNKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 2 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: PFIFINTYILSCNTGEVEARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: HSFSLTHIFCPAILERWNNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 2 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR TCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 2 (lower is better)
Translates to: HSFSLTHIFCPAILERWNDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR TCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTGGAGTACAGTAGCATaGTCTCAGCTCACTGCAACC +
Preference number: 2 (lower is better)
Translates to: SFSLTHIFCPAILERWNVWSTVA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGCTACTGTACTCCA...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAACCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 2 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR GCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: HSFSLTHIFCPAILERWNARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR CCA 72 bp AGTGCACAAATAATGCCCCTTCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCATCACCTGGTGCCACAC +
Preference number: 3 (lower is better)
Translates to: SAQIMPLPGIPR*ALTEGHHLVPH
Trigger: GTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGGAAGGGGCATTATTTGTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR GCA 72 bp TCCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTaGCACACCCTGCAACTCAACATCCATCTTCTCACA +
Preference number: 3 (lower is better)
Translates to: SRGGHLQKGITW*HTLQLNIHLLT
Trigger: TGTGAGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CAA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 3 (lower is better)
Translates to: IFCPAILERWNVSGTEITLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CAA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACATAACTACTAAATTGTaGGTGGGTGAGCACAAGGCC +
Preference number: 3 (lower is better)
Translates to: INTYILSCNTGEVECVWHITTKL*VGEHKA
Trigger: GGCCTTGTGCTCACCCACCAACAATTTAGTAGTTAT...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
3UTR CCA 72 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAAATAACCCCTAGGAGT +
Preference number: 3 (lower is better)
Translates to: LTHIFCPAILER*NVSGTEITPRS
Trigger: ACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CAA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGCTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 3 (lower is better)
Translates to: SFSLTHIFCPAILERWNVLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR-3UTR CAA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAACTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 3 (lower is better)
Translates to: PFIFINTYILSCNTGEVELPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
3UTR CCA 72 bp CACCATATTCTGAATCTTGAAGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTACAACTCTAGCATATTT +
Preference number: 3 (lower is better)
Translates to: HHILNLEVQELS*KTQLLYNSSIF
Trigger: AAATATGCTAGAGTTGTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGACTTCAAGATTCAGAATATGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR TCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCATGCCTGCTGGGACGTTaGCTGCTGAACGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSCLLGR*LLNGCS
Trigger: GCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCA...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCACTGGCGTGGCAGGAGTaGTGGGGGTCATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSLAWQE*WGSWES
Trigger: TGACTCCCATGACCCCCATCACTCCTGCCACGCCAG...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACTGGCGTGGCAGGAGTaGTGGGGGTCATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQLAWQE*WGSWES
Trigger: TGACTCCCATGACCCCCATCACTCCTGCCACGCCAG...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGGCTGCCACTGCCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPAATAC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGCAGC...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCGCTGCCACTGCCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLAATAC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGCAGC...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGGCTGCCACTGCCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLAATAC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGCAGC...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCGCCACAGCGAACCTaGCCGACCTCACTGAACCCC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHPPQRT*PTSLNP
Trigger: GGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGG...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATGGGGGAGGGATACAGTaGAGTGGTGCCCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHGGGIQ*SGARQG
Trigger: CCCTTGCCGGGCACCACTCCACTGTATCCCTCCCCC...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCAGGGATACAGTGGAGTaGTGCCCGGCAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLRDTVE*CPARVQ
Trigger: CTGCACCCTTGCCGGGCACCACTCCACTGTATCCCT...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCTGTGGTGCCTGGCCTaGGGTTCCCTGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSLWCLA*GSLCCL
Trigger: CAGGCAACACAGGGAACCTCAGGCCAGGCACCACAG...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCACTGGCGTGGCAGGAGTaGTGGGGGTCATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPLAWQE*WGSWES
Trigger: TGACTCCCATGACCCCCATCACTCCTGCCACGCCAG...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCTGAACGGCTGCAGCTaGCACTGCCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHLNGCS*HCLLLL
Trigger: CAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAG...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGGATACAGTGGAGTGGTaGCCGGCAAGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLDTVEW*PARVQL
Trigger: CAACTGCACCCTTGCCGGGCACCACTCCACTGTATC...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGGTGAGAGTCTGTGAGTaGAAGAGCTGTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPVRVCE*KSCGAW
Trigger: CCAGGCACCACAGCTCTTCCACTCACAGACTCTCAC...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCACGCCAAGAAACAGTaGTGCTGCTGGGTCACTGCA +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLHAKKQ*CCWVTA
Trigger: TGCAGTGACCCAGCAGCATCACTGTTTCTTGGCGTG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230354.10
CDS-3UTR TCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCTGGGACGTTGACTGCTaGACGGCTGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSWDVDC*TAAAAT
Trigger: AGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCA...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGGCAAGGGTGCAGTTGTaGGAGTCTGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPARVQL*ESVSGR
Trigger: TCTTCCACTCACAGACTCTCACAACTGCACCCTTGC...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAAGTGGGGTCAGTCCAGTaGCATAAGGCATCATTGGAC +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQVGSVQ*HKASLD
Trigger: GTCCAATGATGCCTTATGGCACTGGACTGACCCCAC...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATGATACAGTGGAGTGGTaGCCGGCAAGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHDTVEW*PARVQL
Trigger: CAACTGCACCCTTGCCGGGCACCACTCCACTGTATC...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCGGCACCCTGGGTCACTaGAAAGATCACTATGGGCCA +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLGTLGH*KDHYGP
Trigger: TGGCCCATAGTGATCTTTGCAGTGACCCAGGGTGCC...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540980.5
CDS-3UTR CCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCACTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSLQRSL*ASGSEV
Trigger: AACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAG...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGGTGAGAGTCTGTGAGTaGAAGAGCTGTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLVRVCE*KSCGAW
Trigger: CCAGGCACCACAGCTCTTCCACTCACAGACTCTCAC...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGGGGGAGGGATACAGTaGAGTGGTGCCCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSGGGIQ*SGARQG
Trigger: CCCTTGCCGGGCACCACTCCACTGTATCCCTCCCCC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAGGCAGGCTGTTGTTCTaGTCCATGATGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSGRLLF*SMMFTF
Trigger: GAAAGTGAACATCATGGATCAGAACAACAGCCTGCC...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGCCTGCTGGGACGTTaGCTGCTGAACGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFCLLGR*LLNGCS
Trigger: GCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCA...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGATACAGTGGAGTGGTaGCCGGCAAGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPDTVEW*PARVQL
Trigger: CAACTGCACCCTTGCCGGGCACCACTCCACTGTATC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAGTTCCCTGTGTTGCCTaGCTTTGTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSVPCVA*LCCSSK
Trigger: TTTGGAAGAGCAACAAAGGCAGGCAACACAGGGAAC...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616883.4
CDS-3UTR CCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCACAGAAACCCTTGCGCTaGAACTCGTCTCACTATTCA +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSQKPLR*NSSHYS
Trigger: TGAATAGTGAGACGAGTTCCAGCGCAAGGGTTTCTG...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAAGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQVLNRL*GQSSAI
Trigger: TATGGCACTGGACTGACCCCACAGCCTATTCAGAAC...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGGGTCATGGGAGTCATaGGGGAGGGATACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPGSWES*GRDTVE
Trigger: CTCCACTGTATCCCTCCCCCATGACTCCCATGACCC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCAGAACTCTCCGAAGCTaGCGTGGCAGGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSRTLRS*RGRSDG
Trigger: CCCATCACTCCTGCCACGCCAGCTTCGGAGAGTTCT...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQQCRGS*LSYPHD
Trigger: ATCATGAGGATAAGAGAGCCACGAACCACGGCACTG...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACCTGCCCATATCTCTTaGCTCCTGTGCACACCATTT +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQPAHIS*LLCTPF
Trigger: AAATGGTGTGCACAGGAGCCAAGAGATATGGGCAGG...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGGGACGTTGACTGCTaGACGGCTGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFWDVDC*TAAAAT
Trigger: AGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCA...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTATTTGCCCGCCTTGGTaGGACACCACGCCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSICPPW*DTTPAH
Trigger: ATGGGCAGGCGTGGTGTCTCACCAAGGCGGGCAAAT...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR GCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTTTAAGCGATTCTCGTaGTTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPFKRFS*FSLPSS
Trigger: GCTACTTGGGAGGCTGAAGCACGAGAATCGCTTAAA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTAGGGATACAGTGGAGTaGTGCCCGGCAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSRDTVE*CPARVQ
Trigger: CTGCACCCTTGCCGGGCACCACTCCACTGTATCCCT...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLQCRGS*LSYPHD
Trigger: ATCATGAGGATAAGAGAGCCACGAACCACGGCACTG...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT +
Preference number: 4 (lower is better)
Translates to: PAVGTYRRASPGATPCNSTVLHS*LLCTPF
Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGT...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAATCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGGGCAGGCTGTTGTTCTaGTCCATGATGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLGRLLF*SMMFTF
Trigger: GAAAGTGAACATCATGGATCAGAACAACAGCCTGCC...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCAGTTGTGAGAGTCTGTaGGTGGAAGAGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSSCESL*VEELWC
Trigger: GCACCACAGCTCTTCCACTCACAGACTCTCACAACT...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLPFSQN*KSVPWF
Trigger: GAACCACGGCACTGATTTTCAGTTCTGGGAAAATGG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLPFSQN*KSVPWF
Trigger: GAACCACGGCACTGATTTTCAGTTCTGGGAAAATGG...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCGGAGGCAAGGGTACATaGGAGCCATTACGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSGGKGT*EPLRRL
Trigger: AAGACGACGTAATGGCTCTCATGTACCCTTGCCTCC...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGGAGGCAAGGGTACATaGGAGCCATTACGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPGGKGT*EPLRRL
Trigger: AAGACGACGTAATGGCTCTCATGTACCCTTGCCTCC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGTGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLCCCCC*CCLCCS
Trigger: AGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCA...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCGCAGCAAACCGCTTaGGATTATATTCGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHPQQTA*DYIRRF
Trigger: GAAACGCCGAATATAATCCCAAGCGGTTTGCTGCGG...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAAACTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQTVLHS*LLCTPF
Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGT...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHPFSQN*KSVPWF
Trigger: GAACCACGGCACTGATTTTCAGTTCTGGGAAAATGG...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCACAAACCAGAAACCCTTaGGCTGGAACTCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPQTRNP*AGTRLT
Trigger: AGTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTG...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTGCTGCTGCCTTTGTTaGTCTTCCAAAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPCCCLC*SSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGTGTTGTTGCTGCTGCTaGCTTTGTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLCCCCC*LCCSSK
Trigger: TTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACA...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGACAATATTTTGCAGCTaGGGTACAATCCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPTIFCS*GTIPEL
Trigger: GAGTTCTGGGATTGTACCGCAGCTGCAAAATATTGT...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAAACTTCCTCAATTCCTTaGGTTATCTTCACACGCCAA +
Preference number: 4 (lower is better)
Translates to: PRWALTEGHHLVPHPATQTSSIP*VIFTRQ
Trigger: TTGGCGTGTGAAGATAACCCAAGGAATTGAGGAAGT...TTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAGGGGGAGGGATACAGTaGAGTGGTGCCCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRGGGIQ*SGARQG
Trigger: CCCTTGCCGGGCACCACTCCACTGTATCCCTCCCCC...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSQCRGS*LSYPHD
Trigger: ATCATGAGGATAAGAGAGCCACGAACCACGGCACTG...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCACTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLTVLHS*LLCTPF
Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGT...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCTACTAAATTGTTGGTaGGTGAGCACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLLLNCW*VSTRPS
Trigger: AGAAGGCCTTGTGCTCACCCACCAACAATTTAGTAG...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCTACTAAATTGTTGGTaGGTGAGCACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLLLNCW*VSTRPS
Trigger: AGAAGGCCTTGTGCTCACCCACCAACAATTTAGTAG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCAGTTGTGAGAGTCTGTaGGTGGAAGAGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFSCESL*VEELWC
Trigger: GCACCACAGCTCTTCCACTCACAGACTCTCACAACT...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCGCAAGGGTGCAGTTGTaGGAGTCTGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFARVQL*ESVSGR
Trigger: TCTTCCACTCACAGACTCTCACAACTGCACCCTTGC...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAACTGGCGTGGCAGGAGTaGTGGGGGTCATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKLAWQE*WGSWES
Trigger: TGACTCCCATGACCCCCATCACTCCTGCCACGCCAG...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCGGAGGCAAGGGTACATaGGAGCCATTACGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFGGKGT*EPLRRL
Trigger: AAGACGACGTAATGGCTCTCATGTACCCTTGCCTCC...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCTGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSCCCCC*CLCCSS
Trigger: GGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACA...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPCCCCC*CLCCSS
Trigger: GGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACA...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPCCCCC*CCLCCS
Trigger: AGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCA...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGCCACTGCCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKATACC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSRTENQ*RGSWLS
Trigger: AGAGAGCCACGAACCACGGCACTGATTTTCAGTTCT...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCCCGCCACAGCGAACCTaGCCGACCTCACTGAACCCC +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGPPQRT*PTSLNP
Trigger: GGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGG...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAGGATTCCGGGAGTCATaGCACCCTGAGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRGFRES*HPEGRP
Trigger: TGGCCTCCCCTCAGGGTGCCATGACTCCCGGAATCC...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGGGGGAGGGATACAGTaGAGTGGTGCCCGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNGGGIQ*SGARQG
Trigger: CCCTTGCCGGGCACCACTCCACTGTATCCCTCCCCC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCACCTCACTGAACCCCTaGCGCGCGTTGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFTSLNP*RALIMS
Trigger: TGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGT...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540980.5
ENST00000616883.4
CDS-3UTR TCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACTGCCTGCTGGGACGTTaGCTGCTGAACGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHCLLGR*LLNGCS
Trigger: GCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCA...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACCTGTGGTGCCTGGCCTaGGGTTCCCTGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHLWCLA*GSLCCL
Trigger: CAGGCAACACAGGGAACCTCAGGCCAGGCACCACAG...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACACTGTGGTGCCTGGCCTaGGGTTCCCTGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTLWCLA*GSLCCL
Trigger: CAGGCAACACAGGGAACCTCAGGCCAGGCACCACAG...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATTGCTGCTGCCTTTGTTaGTCTTCCAAAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHCCCLC*SSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCA...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACGCCACTGCCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHATACC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGC...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGCCACTGCCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNATACC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGCCACTGCCTGTTGCTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTATACC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGC...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCGTGATGCTGGGTCACTaGAAAGATCACTATGGGCCA +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFVMLGH*KDHYGP
Trigger: TGGCCCATAGTGATCTTTGCAGTGACCCAGCATCAC...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392092.7
ENST00000616883.4
CDS-3UTR CCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGGATTCCGGGAGTCATaGCACCCTGAGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNGFRES*HPEGRP
Trigger: TGGCCTCCCCTCAGGGTGCCATGACTCCCGGAATCC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCGGATTCCGGGAGTCATaGCACCCTGAGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGGFRES*HPEGRP
Trigger: TGGCCTCCCCTCAGGGTGCCATGACTCCCGGAATCC...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSVLNRL*GQSSAI
Trigger: TATGGCACTGGACTGACCCCACAGCCTATTCAGAAC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCAGGGATACAGTGGAGTaGTGCCCGGCAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITRDTVE*CPARVQ
Trigger: CTGCACCCTTGCCGGGCACCACTCCACTGTATCCCT...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGGGTCATGGGAGTCATaGGGGAGGGATACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYGSWES*GRDTVE
Trigger: CTCCACTGTATCCCTCCCCCATGACTCCCATGACCC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCCCGCAGCAAACCGCTTaGGATTATATTCGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFPQQTA*DYIRRF
Trigger: GAAACGCCGAATATAATCCCAAGCGGTTTGCTGCGG...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCCAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGAT +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFQCRGS*LSYPHD
Trigger: ATCATGAGGATAAGAGAGCCACGAACCACGGCACTG...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RWALTEGHHLVPHPATQHVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCACTACTAAATTGTTGGTaGGTGAGCACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPLLNCW*VSTRPS
Trigger: AGAAGGCCTTGTGCTCACCCACCAACAATTTAGTAG...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACACCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGGCAGGCTGTTGTTCTaGTCCATGATGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSGRLLF*SMMFTF
Trigger: GAAAGTGAACATCATGGATCAGAACAACAGCCTGCC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCAGACTATTGGTGTTCTaGATAGGCTGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFRLLVF*IGCGVS
Trigger: ACTGACCCCACAGCCTATTCAGAACACCAATAGTCT...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCTGGGACGTTGACTGCTaGACGGCTGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGWDVDC*TAAAAT
Trigger: AGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCA...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACTGGGACGTTGACTGCTaGACGGCTGCAGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHWDVDC*TAAAAT
Trigger: AGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCA...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCCTGAACGGCTGCAGCTaGCACTGCCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGLNGCS*HCLLLL
Trigger: CAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAG...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACCTGAACGGCTGCAGCTaGCACTGCCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHLNGCS*HCLLLL
Trigger: CAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAG...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGATACAGTGGAGTGGTaGCCGGCAAGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKDTVEW*PARVQL
Trigger: CAACTGCACCCTTGCCGGGCACCACTCCACTGTATC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYALSVR*QAVVLI
Trigger: GATCAGAACAACAGCCTGCCACCTTACGCTCAGGGC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGTGAGAGTCTGTGAGTaGAAGAGCTGTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYVRVCE*KSCGAW
Trigger: CCAGGCACCACAGCTCTTCCACTCACAGACTCTCAC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGGGTCATGGGAGTCATaGGGGAGGGATACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKGSWES*GRDTVE
Trigger: CTCCACTGTATCCCTCCCCCATGACTCCCATGACCC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTTCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATCTGGTCTCGAACTCCTaGCCTCAAGTGATTTGCCCG +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYLVSNS*PQVICP
Trigger: CGGGCAAATCACTTGAGGCCAGGAGTTCGAGACCAG...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAGTTGTGAGAGTCTGTaGGTGGAAGAGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYSCESL*VEELWC
Trigger: GCACCACAGCTCTTCCACTCACAGACTCTCACAACT...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGGAGGCAAGGGTACATaGGAGCCATTACGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYGGKGT*EPLRRL
Trigger: AAGACGACGTAATGGCTCTCATGTACCCTTGCCTCC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACTCCTGGCCTCAAGTaGTTTGCCCGCCTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGTPGLK*FARLGE
Trigger: CTCACCAAGGCGGGCAAATCACTTGAGGCCAGGAGT...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCGATACAGTGGAGTGGTaGCCGGCAAGGGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGDTVEW*PARVQL
Trigger: CAACTGCACCCTTGCCGGGCACCACTCCACTGTATC...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATTGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAACATATATTCTGTCCTaGAATACTGGAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WALTEGHHLVPHPATQHPTYILS*NTGEVE
Trigger: TTCCACCTCTCCAGTATTGCAGGACAGAATATATGT...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITALSVR*QAVVLI
Trigger: GATCAGAACAACAGCCTGCCACCTTACGCTCAGGGC...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGGGTCATGGGAGTCATaGGGGAGGGATACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTGSWES*GRDTVE
Trigger: CTCCACTGTATCCCTCCCCCATGACTCCCATGACCC...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCAGAACTCTCCGAAGCTaGCGTGGCAGGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGRTLRS*RGRSDG
Trigger: CCCATCACTCCTGCCACGCCAGCTTCGGAGAGTTCT...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAAGAACTCTCCGAAGCTaGCGTGGCAGGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTRTLRS*RGRSDG
Trigger: CCCATCACTCCTGCCACGCCAGCTTCGGAGAGTTCT...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGAACCAAGATTCACTGTaGATACAATATTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLNQDSL*IQYFAA
Trigger: AGCTGCAAAATATTGTATCCACAGTGAATCTTGGTT...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCGGATTCCGGGAGTCATaGCACCCTGGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGGFRES*HPGSLQ
Trigger: TTGCAGTGACCCAGGGTGCCATGACTCCCGGAATCC...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540980.5
CDS-3UTR TCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGCTGTGGTGCCTGGCCTaGGGTTCCCTGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVLWCLA*GSLCCL
Trigger: CAGGCAACACAGGGAACCTCAGGCCAGGCACCACAG...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAGTTGTGAGAGTCTGTaGGTGGAAGAGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRSCESL*VEELWC
Trigger: GCACCACAGCTCTTCCACTCACAGACTCTCACAACT...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAAGTTGTGAGAGTCTGTaGGTGGAAGAGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKSCESL*VEELWC
Trigger: GCACCACAGCTCTTCCACTCACAGACTCTCACAACT...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCGCAAGGGTGCAGTTGTaGGAGTCTGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITARVQL*ESVSGR
Trigger: TCTTCCACTCACAGACTCTCACAACTGCACCCTTGC...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAGCAAGGGTGCAGTTGTaGGAGTCTGTGAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRARVQL*ESVSGR
Trigger: TCTTCCACTCACAGACTCTCACAACTGCACCCTTGC...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATCAAACCAGAAACCCTTaGGCTGGAACTCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYQTRNP*AGTRLT
Trigger: AGTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTG...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCGTGGGGTCAGTCCAGTaGCATAAGGCATCATTGGAC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITVGSVQ*HKASLD
Trigger: GTCCAATGATGCCTTATGGCACTGGACTGACCCCAC...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCACAATATTTTGCAGCTaGGGTACAATCCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFTIFCS*GTIPEL
Trigger: GAGTTCTGGGATTGTACCGCAGCTGCAAAATATTGT...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTGGTGCCACACCCTaGAACTCAACATCCATCTTC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITPGATP*NSTSIF
Trigger: GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGCGCGGTGTTCTCAGTaGACAAATAATGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKARCSQ*TNNAPS
Trigger: GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNNSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACGTGAGACACCACGCCTaGCCATATCTCTTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHVRHHA*PYLLAP
Trigger: AGGAGCCAAGAGATATGGGCAGGCGTGGTGTCTCAC...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYVLNRL*GQSSAI
Trigger: TATGGCACTGGACTGACCCCACAGCCTATTCAGAAC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAACCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAACCTCACTGAACCCCTaGCGCGCGTTGATAATGTCA +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRTSLNP*RALIMS
Trigger: TGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGT...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540980.5
ENST00000616883.4
CDS-3UTR TCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGGCAGGCTGTTGTTCTaGTCCATGATGTTCACTTTC +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYGRLLF*SMMFTF
Trigger: GAAAGTGAACATCATGGATCAGAACAACAGCCTGCC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAGACTATTGGTGTTCTaGATAGGCTGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYRLLVF*IGCGVS
Trigger: ACTGACCCCACAGCCTATTCAGAACACCAATAGTCT...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATTGCCTGCTGGGACGTTaGCTGCTGAACGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNCLLGR*LLNGCS
Trigger: GCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCA...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR TCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATCTGGCGTGGCAGGAGTaGTGGGGGTCATGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNLAWQE*WGSWES
Trigger: TGACTCCCATGACCCCCATCACTCCTGCCACGCCAG...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGCTCTCTTATCCTCATaGTTACCGCAGCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKALLSS*LPQQTA
Trigger: AGCGGTTTGCTGCGGTAATCATGAGGATAAGAGAGC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAATGCTGCTGGGTCACTaGAAAGATCACTATGGGCCA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKMLLGH*KDHYGP
Trigger: TGGCCCATAGTGATCTTTGCAGTGACCCAGCAGCAT...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230354.10
CDS-3UTR GCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGTGGGGTCAGTCCAGTaGCATAAGGCATCATTGGAC +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNVGSVQ*HKASLD
Trigger: GTCCAATGATGCCTTATGGCACTGGACTGACCCCAC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATTGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYCCCCC*CCLCCS
Trigger: AGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCA...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAGCTGCCACTGCCTGTTaGTGCTGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQAATAC*CCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGCAGC...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAACTGAACGGCTGCAGCTaGCACTGCCTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVELNGCS*HCLLLL
Trigger: CAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAG...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITLQRSL*ASGSEV
Trigger: AACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKVLNRL*GQSSAI
Trigger: TATGGCACTGGACTGACCCCACAGCCTATTCAGAAC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGAGGGATACAGTGGAGTaGTGCCCGGCAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVRDTVE*CPARVQ
Trigger: CTGCACCCTTGCCGGGCACCACTCCACTGTATCCCT...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGACCGCAGCAAACCGCTTaGGATTATATTCGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRPQQTA*DYIRRF
Trigger: GAAACGCCGAATATAATCCCAAGCGGTTTGCTGCGG...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATCCCGGCATCCCGCGGTaGGCACTTACAGAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNPGIPR*ALTEGH
Trigger: ATGCCCTTCTGTAAGTGCCCACCGCGGGATGCCGGG...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AILERWNVSGTEITPRSYLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACTGGAGTACAGTAGCATaGTCTCAGCTCACTGCAACC +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHWSTVA*SQLTAT
Trigger: GGTTGCAGTGAGCTGAGATCATGCTACTGTACTCCA...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR GCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCTGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITCCCCC*CLCCSS
Trigger: GGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACA...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGATGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRCCCCC*CCLCCS
Trigger: AGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCA...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITRTENQ*RGSWLS
Trigger: AGAGAGCCACGAACCACGGCACTGATTTTCAGTTCT...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTTGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: TYRRASPGATPCNSTSIFCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACGTGATGCTGGGTCACTaGAAAGATCACTATGGGCCA +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHVMLGH*KDHYGP
Trigger: TGGCCCATAGTGATCTTTGCAGTGACCCAGCATCAC...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392092.7
ENST00000616883.4
CDS-3UTR CCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACACTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTLQRSL*ASGSEV
Trigger: AACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAG...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACCTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTT +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHLQRSL*ASGSEV
Trigger: AACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAG...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAACAGAAACCCTTGCGCTaGAACTCGTCTCACTATTCA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKQKPLR*NSSHYS
Trigger: TGAATAGTGAGACGAGTTCCAGCGCAAGGGTTTCTG...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATA +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNVLNRL*GQSSAI
Trigger: TATGGCACTGGACTGACCCCACAGCCTATTCAGAAC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAAGGGATACAGTGGAGTaGTGCCCGGCAAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQRDTVE*CPARVQ
Trigger: CTGCACCCTTGCCGGGCACCACTCCACTGTATCCCT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGAGAACTCTCCGAAGCTaGCGTGGCAGGAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVRTLRS*RGRSDG
Trigger: CCCATCACTCCTGCCACGCCAGCTTCGGAGAGTTCT...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATCCGCAGCAAACCGCTTaGGATTATATTCGGCGTTTC +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNPQQTA*DYIRRF
Trigger: GAAACGCCGAATATAATCCCAAGCGGTTTGCTGCGG...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGATCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATCTGTCCTGCAATACTaGAGAGGTGGAATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKSVLQY*RGGMCL
Trigger: CAGACACATTCCACCTCTCCAGTATTGCAGGACAGA...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGCCTCCCAAGTAGCTaGGACTACAGACATCCACTA +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHSLPSS*DYRHPL
Trigger: TAGTGGATGTCTGTAGTCCCAGCTACTTGGGAGGCT...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR TCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACAGACTATTGGTGTTCTaGATAGGCTGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNRLLVF*IGCGVS
Trigger: ACTGACCCCACAGCCTATTCAGAACACCAATAGTCT...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTC +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNPFSQN*KSVPWF
Trigger: GAACCACGGCACTGATTTTCAGTTCTGGGAAAATGG...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACATGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTCCCCC*CLCCSS
Trigger: GGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACA...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNRTENQ*RGSWLS
Trigger: AGAGAGCCACGAACCACGGCACTGATTTTCAGTTCT...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTRTENQ*RGSWLS
Trigger: AGAGAGCCACGAACCACGGCACTGATTTTCAGTTCT...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAAAGGGCATCACCTGGTaGCACACCCTGCAACTCAAC +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEKGITW*HTLQLN
Trigger: GTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTT...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAAACTCACAGTCACGCTaGGCGGTGTTCTCAGTGCAC +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVENSQSR*AVFSVH
Trigger: GTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTT...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCATCTCTTGGCTCCTGTaGACACCATTTTCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGISWLL*TPFSQN
Trigger: GTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGAT...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS-3UTR CCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCAGAAACCCTTGCGCTaGAACTCGTCTCACTATTCA +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNQKPLR*NSSHYS
Trigger: TGAATAGTGAGACGAGTTCCAGCGCAAGGGTTTCTG...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEALSVR*QAVVLI
Trigger: GATCAGAACAACAGCCTGCCACCTTACGCTCAGGGC...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATC +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVALSVR*QAVVLI
Trigger: GATCAGAACAACAGCCTGCCACCTTACGCTCAGGGC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGGGTCATGGGAGTCATaGGGGAGGGATACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNGSWES*GRDTVE
Trigger: CTCCACTGTATCCCTCCCCCATGACTCCCATGACCC...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAACTGTTCTTCACTCTTaGCTCCTGTGCACACCATTT +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKTVLHS*LLCTPF
Trigger: AAATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGT...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CCA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YILSCNTGEVECVWHRNNAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGATAGCAGCACGGTATaGGCAACTCACAGTCACGCT +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVDSSTV*ATHSHA
Trigger: AGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAGTGGGGTCAGTCCAGTaGCATAAGGCATCATTGGAC +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEVGSVQ*HKASLD
Trigger: GTCCAATGATGCCTTATGGCACTGGACTGACCCCAC...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGCTGCTGCCTTTGTTaGTCTTCCAAAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKCCCLC*SSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCA...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGATGCTGCTGCCTTTGTTaGTCTTCCAAAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRCCCLC*SSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCA...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACATGTTGTTGCTGCTGCTaGCTTTGTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTCCCCC*LCCSSK
Trigger: TTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACA...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAACAATATTTTGCAGCTaGGGTACAATCCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKTIFCS*GTIPEL
Trigger: GAGTTCTGGGATTGTACCGCAGCTGCAAAATATTGT...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAAGTTGCCTGCCTTTGTTaGTCTTCCAAAATAGACAGA +
Preference number: 4 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKVACLC*SSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGGCAAC...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616883.4
CDS-3UTR CCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAGTGAGAGTCTGTGAGTaGAAGAGCTGTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQVRVCE*KSCGAW
Trigger: CCAGGCACCACAGCTCTTCCACTCACAGACTCTCAC...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: NTYILSCNTGEVECVWHRVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATCTACTAAATTGTTGGTaGGTGAGCACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNLLNCW*VSTRPS
Trigger: AGAAGGCCTTGTGCTCACCCACCAACAATTTAGTAG...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAGGAGTCATGGCACCCTaGGTCACTGCAAAGATCACT +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEGVMAP*VTAKIT
Trigger: AGTGATCTTTGCAGTGACCCAGGGTGCCATGACTCC...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540980.5
CDS-3UTR TCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAGCTCTCTTATCCTCATaGTTACCGCAGCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEALLSS*LPQQTA
Trigger: AGCGGTTTGCTGCGGTAATCATGAGGATAAGAGAGC...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGCTCTCTTATCCTCATaGTTACCGCAGCAAACCGCT +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVALLSS*LPQQTA
Trigger: AGCGGTTTGCTGCGGTAATCATGAGGATAAGAGAGC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGCAAACCAGAAACCCTTaGGCTGGAACTCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVQTRNP*AGTRLT
Trigger: AGTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTG...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAACAAACCAGAAACCCTTaGGCTGGAACTCGTCTCACT +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVEQTRNP*AGTRLT
Trigger: AGTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTG...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCACATATATTCTGTCCTaGAATACTGGAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: IFCPAILERWNVSGTEITTYILS*NTGEVE
Trigger: TTCCACCTCTCCAGTATTGCAGGACAGAATATATGT...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CCATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAAAGACTATTGGTGTTCTaGATAGGCTGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PFIFINTYILSCNTGEVERLLVF*IGCGVS
Trigger: ACTGACCCCACAGCCTATTCAGAACACCAATAGTCT...TTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAACATATATTCTGTCCTaGAATACTGGAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTTYILS*NTGEVE
Trigger: TTCCACCTCTCCAGTATTGCAGGACAGAATATATGT...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGCAATACTGGAGAGGTaGAATGTGTCTGGCACAGAA +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVAILER*NVSGTE
Trigger: TTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAAGACTATTGGTGTTCTaGATAGGCTGTGGGGTCAGT +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQRLLVF*IGCGVS
Trigger: ACTGACCCCACAGCCTATTCAGAACACCAATAGTCT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTGTTGTTGCTGCTGCTaGCTTTGTTGCTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVCCCCC*LCCSSK
Trigger: TTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACA...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR GCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNRTENQ*RGSWLS
Trigger: AGAGAGCCACGAACCACGGCACTGATTTTCAGTTCT...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACATGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: LTHIFCPAILERWNVSGTCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...TGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATTGCTTCATAAATTTCTaGTCTGACTTTAGCACCTGT +
Preference number: 4 (lower is better)
Translates to: TYILSCNTGEVECVWHRNCFINF*SDFSTC
Trigger: ACAGGTGCTAAAGTCAGAGCAGAAATTTATGAAGCA...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGCTACTAAATTGTTGGTaGGTGAGCACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVLLNCW*VSTRPS
Trigger: AGAAGGCCTTGTGCTCACCCACCAACAATTTAGTAG...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR TCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATCTCCCCACCATATTCTaGATCTTGAAGTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNLPTIF*ILKSKN
Trigger: GTTCTTGGACTTCAAGATTCAGAATATGGTGGGGAG...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAACCAAGATTCACTGTaGATACAATATTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: INTYILSCNTGEVECVWHNQDSL*IQYFAA
Trigger: AGCTGCAAAATATTGTATCCACAGTGAATCTTGGTT...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCAACCAAGATTCACTGTaGATACAATATTTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SLTHIFCPAILERWNVSGNQDSL*IQYFAA
Trigger: AGCTGCAAAATATTGTATCCACAGTGAATCTTGGTT...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CCA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGGTCCAAGAACTTAGCTaGAAAACCCAACTTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SFSLTHIFCPAILERWNVVQELS*KTQLLY
Trigger: GTACAGAAGTTGGGTTTTCCAGCTAAGTTCTTGGAC...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAACAATATTTTGCAGCTaGGGTACAATCCCAGAACTC +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQTIFCS*GTIPEL
Trigger: GAGTTCTGGGATTGTACCGCAGCTGCAAAATATTGT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAACATATATTCTGTCCTaGAATACTGGAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQTYILS*NTGEVE
Trigger: TTCCACCTCTCCAGTATTGCAGGACAGAATATATGT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR GCA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATACATATATTCTGTCCTaGAATACTGGAGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: HSFSLTHIFCPAILERWNTYILS*NTGEVE
Trigger: TTCCACCTCTCCAGTATTGCAGGACAGAATATATGT...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS CCA 90 bp CCCAGGCGCCCGCCACAGCGAACCTGCCCGACCTCACTGAACCCCTaGCGCGCGTTGATAATGTCACTTCCGCCAGTTCTGCCCTCGGCT +
Preference number: 5 (lower is better)
Translates to: PRRPPQRTCPTSLNP*RALIMSLPPVLPSA
Trigger: AGCCGAGGGCAGAACTGGCGGAAGTGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGGGCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421512.5
CDS TCA 90 bp GCCTGGCCTGAGGTTCCCTGTGTTGCCTGCTGGGACGTTGACTGCTaGACGGCTGCAGCTGCCACTGCCTGTTGCTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AWPEVPCVACWDVDC*TAAAATACCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAGGCCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS GCA 90 bp GCGAAGTTAAACAGCCGGCGGCCCAGGCGCCCGCCACAGCGAACCTaGCCGACCTCACTGAACCCCTGGCGCGCGTTGATAATGTCACTT +
Preference number: 5 (lower is better)
Translates to: AKLNSRRPRRPPQRT*PTSLNPWRALIMSL
Trigger: AAGTGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGGGCGCCTGGGCCGCCGGCTGTTTAACTTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000421512.5
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CAA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCATTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: PAVGTYRRASPGATPCNSLPAGT*TAERLQ
Trigger: CTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAA...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS CCA 90 bp AGTGGAGTGGTGCCCGGCAAGGGTGCAGTTGTGAGAGTCTGTGAGTaGAAGAGCTGTGGTGCCTGGCCTGAGGTTCCCTGTGTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: SGVVPGKGAVVRVCE*KSCGAWPEVPCVAC
Trigger: GCAGGCAACACAGGGAACCTCAGGCCAGGCACCACAGCTCTTCCACTCACAGACTCTCACAACTGCACCCTTGCCGGGCACCACTCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPLPAGT*TAERLQ
Trigger: CTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS CCA 90 bp ACGCCAAGAAACAGTGATGCTGCTGGGTCACTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTTAAACAGCCGGCGGCCCAGGCGCCC +
Preference number: 5 (lower is better)
Translates to: TPRNSDAAGSLQRSL*ASGSEVKQPAAQAP
Trigger: GGGCGCCTGGGCCGCCGGCTGTTTAACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAGTGACCCAGCAGCATCACTGTTTCTTGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230354.10
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGCTGAGGTTCCCTGTGTaGCCTGCTGGGACGTTGACT +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPLRFPV*PAGTLT
Trigger: AGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAG...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp CGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCTGAGGTTCCCTGTGTaGCCTGCTGGGACGTTGACT +
Preference number: 5 (lower is better)
Translates to: RWALTEGHHLVPHPATQHLRFPV*PAGTLT
Trigger: AGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAG...ATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS GCA 90 bp CTCCTGGCCTCAAGTGATTTGCCCGCCTTGGTGAGACACCACGCCTaGCCATATCTCTTGGCTCCTGTGCACACCATTTTCCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: LLASSDLPALVRHHA*PYLLAPVHTIFPEL
Trigger: CAGTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGATATGGGCAGGCGTGGTGTCTCACCAAGGCGGGCAAATCACTTGAGGCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS CCA 90 bp GGGAGTCATGGCACCCTGAGGGGAGGCCAAGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATCCATGATGTTCACTTTCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: GSHGTLRGGQALSVR*QAVVLIHDVHFLLG
Trigger: GCCAAGAAGAAAGTGAACATCATGGATCAGAACAACAGCCTGCCACCTTACGCTCAGGGCTTGGCCTCCCCTCAGGGTGCCATGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGACCGCAGCAAACCGCTaGGGATTATATTCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPTAANR*GLYSAF
Trigger: AAACGCCGAATATAATCCCAAGCGGTTTGCTGCGGT...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCCTGAGGTTCCCTGTGTaGCCTGCCTTTGTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLLRFPV*PAFVAL
Trigger: AAGAGCAACAAAGGCAGGCAACACAGGGAACCTCAG...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616883.4
CDS-3UTR CAA 90 bp ATGGGCAGCGCTGCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGACCGCAGCAAACCGCTaGGGATTATATTCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: MGSAAQIAARYEQLTVTLTAANR*GLYSAF
Trigger: AAACGCCGAATATAATCCCAAGCGGTTTGCTGCGGT...CAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGCAGCGCTGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGAACTTCCTCAATTCCTaGGGTTATCTTCACACGCCA +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPNFLNS*GYLHTP
Trigger: TGGCGTGTGAAGATAACCCAAGGAATTGAGGAAGTT...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGATAACTACTAAATTGTaGGTGGGTGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPITTKL*VGEHKA
Trigger: GGCCTTGTGCTCACCCACCAACAATTTAGTAGTTAT...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CCCGCGGTGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCACTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: PAVGTYRRASPGATPCNSLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...TGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCACCGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGTGTTGCCTGCCTTTGTaGCTCTTCCAAAATAGACAG +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPCCLPL*LFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGGCAACA...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616883.4
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTaGTGTTGTTGTTGCTGCTGCTGCCTTTGTTGCTCTTCCAAAATA +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCCLCCSSKI
Trigger: TATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAG +
Preference number: 5 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHLLLPL*LFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAG...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCAGACTGTTCTTCACTCTaGGCTCCTGTGCACACCATT +
Preference number: 5 (lower is better)
Translates to: WALTEGHHLVPHPATQHPDCSSL*APVHTI
Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGTC...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CAA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCGACTGTTCTTCACTCTaGGCTCCTGTGCACACCATT +
Preference number: 5 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSDCSSL*APVHTI
Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGTC...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CAA 90 bp GCCCAGATAGCAGCACGGTATGAGCAACTCACAGTCACGCTGCGCGGTGTTCTCATAACTACTAAATTGTaGGTGGGTGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: AQIAARYEQLTVTLRGVLITTKL*VGEHKA
Trigger: GGCCTTGTGCTCACCCACCAACAATTTAGTAGTTAT...GAGAACACCGCGCAGCGTGACTGTGAGTTGCTCATACCGTGCTGCTATCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCCCGCTCATAACTACTAAATaGTTGGTGGGTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: VTLRGVLSAQIMPLPGIPLITTK*LVGEHK
Trigger: CTTGTGCTCACCCACCAACAATTTAGTAGTTATGAG...CGGGATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS TCA 90 bp AGGCCAAGCCCTGAGCGTAAGGTGGCAGGCTGTTGTTCTGATCCATaGTGTTCACTTTCTTCTTGGCAAACCAGAAACCCTTGCGCTGGA +
Preference number: 5 (lower is better)
Translates to: RPSPERKVAGCCSDP*CSLSSWQTRNPCAG
Trigger: TCCAGCGCAAGGGTTTCTGGTTTGCCAAGAAGAAAGTGAACATCATGGATCAGAACAACAGCCTGCCACCTTACGCTCAGGGCTTGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATTGTGGATACAATATTTaGCAGCTGCGGTACAATCCC +
Preference number: 5 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHCGYNI*QLRYNP
Trigger: GGGATTGTACCGCAGCTGCAAAATATTGTATCCACA...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKLPAGT*TAERLQ
Trigger: CTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAA...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCTCATAACTACTAAATaGTTGGTGGGTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHLITTK*LVGEHK
Trigger: CTTGTGCTCACCCACCAACAATTTAGTAGTTATGAG...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCGGCATCTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: HSHAARCSQCTNNAPSRHLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...ATGCCGGGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GCAACTCACAGTCACGCTGCGCGGTGTTCTCAGTGCACAAATAATGCCCCTTCCCTGTGTTGCCTGCCTTaGTTGCTCTTCCAAAATAGA +
Preference number: 5 (lower is better)
Translates to: ATHSHAARCSQCTNNAPSLCCLP*LLFQNR
Trigger: TCTATTTTGGAAGAGCAACAAAGGCAGGCAACACAG...GGAAGGGGCATTATTTGTGCACTGAGAACACCGCGCAGCGTGACTGTGAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616883.4
CDS GCA 90 bp TGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCCAAAATAGACAGACTATTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CLCCSSKIDRLLVF
Trigger: GAACACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS GCA 90 bp TGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCTTCCAAAATAGACAGACTATTGGTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCLCCSSKIDRLLV
Trigger: CACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS GCA 90 bp TGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTaGTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGACAGACTATTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCLCCSSKIDRLL
Trigger: CAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp ACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAG +
Preference number: 5 (lower is better)
Translates to: TYRRASPGATPCNSTSIFLLLPL*LFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAG...GAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACTTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: INTYILSCNTGEVECVWHLPAGT*TAERLQ
Trigger: CTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAA...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp TGGGCACTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCACTCATAACTACTAAATaGTTGGTGGGTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: WALTEGHHLVPHPATQHPLITTK*LVGEHK
Trigger: CTTGTGCTCACCCACCAACAATTTAGTAGTTATGAG...TGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAGTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATGCCTGCCCATATCTCTaGGCTCCTGTGCACACCATT +
Preference number: 5 (lower is better)
Translates to: AILERWNVSGTEITPRSYACPYL*APVHTI
Trigger: AATGGTGTGCACAGGAGCCAAGAGATATGGGCAGGC...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS GCA 90 bp ACTCTTGGCTCCTGTGCACACCATTTTCCCAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCTTATCCTCATGATTACCGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: TLGSCAHHFPRTENQ*RGSWLSYPHDYRSK
Trigger: TTTGCTGCGGTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS GCA 90 bp TCTCTTGGCTCCTGTGCACACCATTTTCCCAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCTTATCCTCATGATTACCGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SLGSCAHHFPRTENQ*RGSWLSYPHDYRSK
Trigger: TTTGCTGCGGTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS CCA 90 bp TGTGCACACCATTTTCCCAGAACTGAAAATCAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGATTACCGCAGCAAACCGCTTGGGATT +
Preference number: 5 (lower is better)
Translates to: CAHHFPRTENQCRGS*LSYPHDYRSKPLGI
Trigger: AATCCCAAGCGGTTTGCTGCGGTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAGCAAACCAGAAACCCTaGCGCTGGAACTCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: NTYILSCNTGEVECVWHRANQKP*RWNSSH
Trigger: GTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTGC...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATCTGAGGTTCCCTGTGTaGCCTGCTGGGACGTTGACT +
Preference number: 5 (lower is better)
Translates to: TYILSCNTGEVECVWHRNLRFPV*PAGTLT
Trigger: AGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAG...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp ATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACCTGAGGTTCCCTGTGTaGCCTGCTGGGACGTTGACT +
Preference number: 5 (lower is better)
Translates to: INTYILSCNTGEVECVWHLRFPV*PAGTLT
Trigger: AGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAG...GTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTTGTGGATACAATATTTaGCAGCTGCGGTACAATCCC +
Preference number: 5 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSCGYNI*QLRYNP
Trigger: GGGATTGTACCGCAGCTGCAAAATATTGTATCCACA...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTATAACTACTAAATTGTaGGTGGGTGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSITTKL*VGEHKA
Trigger: GGCCTTGTGCTCACCCACCAACAATTTAGTAGTTAT...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACGCAAACCAGAAACCCTaGCGCTGGAACTCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: YILSCNTGEVECVWHRNNANQKP*RWNSSH
Trigger: GTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTGC...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CTTACAGAAGGGCATCACCTGGTGCCACACCCTGCAACTCAACATCCATCTTCTCTCATAACTACTAAATaGTTGGTGGGTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: LTEGHHLVPHPATQHPSSLITTK*LVGEHK
Trigger: CTTGTGCTCACCCACCAACAATTTAGTAGTTATGAG...AGAAGATGGATGTTGAGTTGCAGGGTGTGGCACCAGGTGATGCCCTTCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCACCGCAGCAAACCGCTaGGGATTATATTCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: IFCPAILERWNVSGTEITTAANR*GLYSAF
Trigger: AAACGCCGAATATAATCCCAAGCGGTTTGCTGCGGT...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAG +
Preference number: 5 (lower is better)
Translates to: IFCPAILERWNVSGTEITLLLPL*LFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAG...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp ACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGACTGTTCTTCACTCTaGGCTCCTGTGCACACCATT +
Preference number: 5 (lower is better)
Translates to: TYILSCNTGEVECVWHRNDCSSL*APVHTI
Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGTC...ATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CAA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACTCTGGAGAAAGTGTCTaGTTCTGTCTCCCATGCTGG +
Preference number: 5 (lower is better)
Translates to: YILSCNTGEVECVWHRNNSGESV*FCLPCW
Trigger: CCAGCATGGGAGACAGAACAAGACACTTTCTCCAGA...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS CCA 90 bp TTGCTCTTCCAAAATAGACAGACTATTGGTGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATAAGGCATCATTGGACTAAAGATAGG +
Preference number: 5 (lower is better)
Translates to: LLFQNRQTIGVLNRL*GQSSAIRHHWTKDR
Trigger: CCTATCTTTAGTCCAATGATGCCTTATGGCACTGGACTGACCCCACAGCCTATTCAGAACACCAATAGTCTGTCTATTTTGGAAGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAG +
Preference number: 5 (lower is better)
Translates to: YILSCNTGEVECVWHRNNLLLPL*LFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAG...GTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000636632.1
CDS-3UTR CAA 90 bp CACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATGTGGATACAATATTTaGCAGCTGCGGTACAATCCC +
Preference number: 5 (lower is better)
Translates to: HIYSVLQYWRGGMCLAQKCGYNI*QLRYNP
Trigger: GGGATTGTACCGCAGCTGCAAAATATTGTATCCACA...TTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGATGTGGATACAATATTTaGCAGCTGCGGTACAATCCC +
Preference number: 5 (lower is better)
Translates to: NTYILSCNTGEVECVWHRCGYNI*QLRYNP
Trigger: GGGATTGTACCGCAGCTGCAAAATATTGTATCCACA...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp ATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCTGTGGATACAATATTTaGCAGCTGCGGTACAATCCC +
Preference number: 5 (lower is better)
Translates to: IFCPAILERWNVSGTEITCGYNI*QLRYNP
Trigger: GGGATTGTACCGCAGCTGCAAAATATTGTATCCACA...GGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp GCAATACTGGAGAGGTGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATCTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: AILERWNVSGTEITPRSYLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...ATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCACCTCTCCAGTATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAGCAAACCAGAAACCCTaGCGCTGGAACTCGTCTCAC +
Preference number: 5 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQANQKP*RWNSSH
Trigger: GTGAGACGAGTTCCAGCGCAAGGGTTTCTGGTTTGC...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp AACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCACAGACTCATAACTACTAAATaGTTGGTGGGTGAGCACAAG +
Preference number: 5 (lower is better)
Translates to: NTYILSCNTGEVECVWHRLITTK*LVGEHK
Trigger: CTTGTGCTCACCCACCAACAATTTAGTAGTTATGAG...TCTGTGCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGACCGCAGCAAACCGCTaGGGATTATATTCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: SFSLTHIFCPAILERWNVTAANR*GLYSAF
Trigger: AAACGCCGAATATAATCCCAAGCGGTTTGCTGCGGT...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGTCTGGCCTCCCTCAAACCAACTaGTCAACAGCAGTGTTTAAA +
Preference number: 5 (lower is better)
Translates to: SLTHIFCPAILERWNVSGLPQTN*STAVFK
Trigger: TTTAAACACTGCTGTTGACAAGTTGGTTTGAGGGAG...GCCAGACACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000446829.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAACCGCAGCAAACCGCTaGGGATTATATTCGGCGTTT +
Preference number: 5 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQTAANR*GLYSAF
Trigger: AAACGCCGAATATAATCCCAAGCGGTTTGCTGCGGT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS-3UTR CAA 90 bp CATTCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGACTGTTCTTCACTCTaGGCTCCTGTGCACACCATT +
Preference number: 5 (lower is better)
Translates to: HSFSLTHIFCPAILERWNDCSSL*APVHTI
Trigger: AATGGTGTGCACAGGAGCCAAGAGTGAAGAACAGTC...ATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS-3UTR CAA 90 bp TCATTTTCATTAACACATATATTCTGTCCTGCAATACTGGAGAGGTGGAATGTGAACTTCCTCAATTCCTaGGGTTATCTTCACACGCCA +
Preference number: 5 (lower is better)
Translates to: SFSLTHIFCPAILERWNVNFLNS*GYLHTP
Trigger: TGGCGTGTGAAGATAACCCAAGGAATTGAGGAAGTT...CACATTCCACCTCTCCAGTATTGCAGGACAGAATATATGTGTTAATGAAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000616883.4
CDS-3UTR CAA 90 bp TGGAATGTGTCTGGCACAGAAATAACCCCTAGGAGTTATAAATTAGAAAAACAAATAACTACTAAATTGTaGGTGGGTGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: WNVSGTEITPRSYKLEKQITTKL*VGEHKA
Trigger: GGCCTTGTGCTCACCCACCAACAATTTAGTAGTTAT...TTGTTTTTCTAATTTATAACTCCTAGGGGTTATTTCTGTGCCAGACACATTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS GCA 72 bp GCCACTGCCTGTTGCTGCTGCTGCTGCTGCTGCTGCTaGTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: ATACCCCCCCCC*CCCCCCCCCCC
Trigger: ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGGCAGTGGC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp GCTGTGGTGCCTGGCCTGAGGTTCCCTGTGTTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAGCTGCCACTGCCTGTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVVPGLRFPVLPAGT*TAERLQLPLPVAAA
Trigger: AGCAGCAGCAACAGGCAGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAGGCCAGGCACCACAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp CCGCCACAGCGAACCTGCCCGACCTCACTGAACCCCTGGCGCGCGTaGATAATGTCACTTCCGCCAGTTCTGCCCTCGGCTTCAGCGAGT +
Preference number: 6 (lower is better)
Translates to: PPQRTCPTSLNPWRA*IMSLPPVLPSASAS
Trigger: ACTCGCTGAAGCCGAGGGCAGAACTGGCGGAAGTGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421512.5
CDS CCA 72 bp CCGCCACAGCGAACCTGCCCGACCTCACTGAACCCCTaGCGCGCGTTGATAATGTCACTTCCGCCAGTTCTG +
Preference number: 6 (lower is better)
Translates to: PPQRTCPTSLNP*RALIMSLPPVL
Trigger: CAGAACTGGCGGAAGTGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGTCGGGCAGGTTCGCTGTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421512.5
CDS CAA 72 bp CCTGGCCTGAGGTTCCCTGTGTTGCCTGCTGGGACGTaGACTGCTGAACGGCTGCAGCTGCCACTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: PGLRFPVLPAGT*TAERLQLPLPV
Trigger: AACAGGCAGTGGCAGCTGCAGCCGTTCAGCAGTCAACGTCCCAGCAGGCAACACAGGGAACCTCAGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 72 bp CGAACCTGCCCGACCTCACTGAACCCCTGGCGCGCGTaGATAATGTCACTTCCGCCAGTTCTGCCCTCGGCT +
Preference number: 6 (lower is better)
Translates to: RTCPTSLNPWRA*IMSLPPVLPSA
Trigger: AGCCGAGGGCAGAACTGGCGGAAGTGACATTATCAACGCGCGCCAGGGGTTCAGTGAGGTCGGGCAGGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421512.5
CDS GCA 72 bp TGCCTGAGCCCCACAATCGTACGATGGGAAGCTGCCTaGGAAACACAGCAGAGTAGGGCACCAGGCGGGAGT +
Preference number: 6 (lower is better)
Translates to: CLSPTIVRWEAA*ETQQSRAPGGS
Trigger: ACTCCCGCCTGGTGCCCTACTCTGCTGTGTTTCGCAGGCAGCTTCCCATCGTACGATTGTGGGGCTCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423353.1
CDS TCA 72 bp TCGAACTCCTGGCCTCAAGTGATTTGCCCGCCTTGGTaGGACACCACGCCTGCCCATATCTCTTGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SNSWPQVICPPW*DTTPAHISWLL
Trigger: CAGGAGCCAAGAGATATGGGCAGGCGTGGTGTCTCACCAAGGCGGGCAAATCACTTGAGGCCAGGAGTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS CCA 72 bp AACAGTGATGCTGCTGGGTCACTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTTAAACAGCCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: NSDAAGSLQRSL*ASGSEVKQPAA
Trigger: GGCCGCCGGCTGTTTAACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAGTGACCCAGCAGCATCACTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230354.10
CDS CCA 72 bp GGCACCCTGAGGGGAGGCCAAGCCCTGAGCGTAAGGTaGCAGGCTGTTGTTCTGATCCATGATGTTCACTTT +
Preference number: 6 (lower is better)
Translates to: GTLRGGQALSVR*QAVVLIHDVHF
Trigger: AAAGTGAACATCATGGATCAGAACAACAGCCTGCCACCTTACGCTCAGGGCTTGGCCTCCCCTCAGGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000616883.4
ENST00000636632.1
CDS CCA 72 bp AGAAACAGTGATGCTGGGTCACTGCAAAGATCACTATaGGCCAGCGGAAGCGAAGTTAAACAGCCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RNSDAGSLQRSL*ASGSEVKQPAA
Trigger: GGCCGCCGGCTGTTTAACTTCGCTTCCGCTGGCCCATAGTGATCTTTGCAGTGACCCAGCATCACTGTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392092.7
ENST00000421512.5
ENST00000616883.4
CDS GCA 72 bp TCAAGTGATTTGCCCGCCTTGGTGAGACACCACGCCTaGCCATATCTCTTGGCTCCTGTGCACACCATTTTC +
Preference number: 6 (lower is better)
Translates to: SSDLPALVRHHA*PYLLAPVHTIF
Trigger: GAAAATGGTGTGCACAGGAGCCAAGAGATATGGGCAGGCGTGGTGTCTCACCAAGGCGGGCAAATCACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS CAA 90 bp CTGCTGCTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTaGTTGTTGCTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGACAG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLLPLLLFQNRQ
Trigger: CTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp CTGCTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTaGTTGCTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGACAGACT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLPLLLFQNRQT
Trigger: AGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS TCA 72 bp CACTCTTGGCTCCTGTGCACACCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTCGTGGCTCTCTTATCC +
Preference number: 6 (lower is better)
Translates to: HSWLLCTPFSQN*KSVPWFVALLS
Trigger: GGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTaGTGCTGCCTTTGTTGCTCTTCCAAAATAGACAGA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCLCCSSKIDR
Trigger: TCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS GCA 72 bp TGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTaGTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGAC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCLCCSSKID
Trigger: GTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 72 bp CTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTaGCTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGA +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLL*LLLPLLLFQNR
Trigger: TCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp CTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTaGCTGCTGCTGCCTTTGTTGCTCTTCCAAAATAGACAGACTATT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLPLLLFQNRQTI
Trigger: AATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS TCA 72 bp ATCTCTTGGCTCCTGTGCACACCATTTTCCCAGAACTaGAAATCAGTGCCGTGGTTCGTGGCTCTCTTATCC +
Preference number: 6 (lower is better)
Translates to: ISWLLCTPFSQN*KSVPWFVALLS
Trigger: GGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACAGGAGCCAAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636632.1
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTaGTGCCTTTGTTGCTCTTCCAAAATAGACAGACTA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CLCCSSKIDRL
Trigger: TAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp CTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAGACTATTGGTGTTCTGAATAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLPL*LFQNRQTIGVLNRL
Trigger: CAGCCTATTCAGAACACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCCTTaGTTGCTCTTCCAAAATAGACAGACTATTGGTGTTCTGAATAGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLP*LLFQNRQTIGVLNR
Trigger: CCTATTCAGAACACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAGCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS TCA 72 bp CCTGAGCGTAAGGTGGCAGGCTGTTGTTCTGATCCATaGTGTTCACTTTCTTCTTGGCAAACCAGAAACCCT +
Preference number: 6 (lower is better)
Translates to: PERKVAGCCSDP*CSLSSWQTRNP
Trigger: AGGGTTTCTGGTTTGCCAAGAAGAAAGTGAACATCATGGATCAGAACAACAGCCTGCCACCTTACGCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000616883.4
ENST00000636632.1
CDS TCA 72 bp AAATCAGTGCCGTGGTTCGTGGCTCTCTTATCCTCATaGTTACCGCAGCAAACCGCTTGGGATTATATTCGG +
Preference number: 6 (lower is better)
Translates to: KSVPWFVALLSS*LPQQTAWDYIR
Trigger: CCGAATATAATCCCAAGCGGTTTGCTGCGGTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS CCA 72 bp CATTTTCCCAGAACTGAAAATCAGTGCCGTGGTTCGTaGCTCTCTTATCCTCATGATTACCGCAGCAAACCG +
Preference number: 6 (lower is better)
Translates to: HFPRTENQCRGS*LSYPHDYRSKP
Trigger: CGGTTTGCTGCGGTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS GCA 72 bp TCCTGTGCACACCATTTTCCCAGAACTGAAAATCAGTaGCGTGGTTCGTGGCTCTCTTATCCTCATGATTAC +
Preference number: 6 (lower is better)
Translates to: SCAHHFPRTENQ*RGSWLSYPHDY
Trigger: GTAATCATGAGGATAAGAGAGCCACGAACCACGGCACTGATTTTCAGTTCTGGGAAAATGGTGTGCACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS CAA 72 bp CTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCCTTTGTaGCTCTTCCAAAATAGACAGACTATTGGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLPL*LFQNRQTIGVL
Trigger: CAGAACACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CAA 72 bp CTGCTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCCTTaGTTGCTCTTCCAAAATAGACAGACTATTGGTGTT +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLP*LLFQNRQTIGV
Trigger: AACACCAATAGTCTGTCTATTTTGGAAGAGCAACAAAGGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000636632.1
CDS CCA 72 bp CAAAATAGACAGACTATTGGTGTTCTGAATAGGCTGTaGGGTCAGTCCAGTGCCATAAGGCATCATTGGACT +
Preference number: 6 (lower is better)
Translates to: QNRQTIGVLNRL*GQSSAIRHHWT
Trigger: AGTCCAATGATGCCTTATGGCACTGGACTGACCCCACAGCCTATTCAGAACACCAATAGTCTGTCTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000423353.1
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS CCA 72 bp TGGGATTATATTCGGCGTTTCGGGCACGAAGTGCAATaGTCTTTAGGTCAAGTTTACAACCAAGATTCACTG +
Preference number: 6 (lower is better)
Translates to: WDYIRRFGHEVQ*SLGQVYNQDSL
Trigger: CAGTGAATCTTGGTTGTAAACTTGACCTAAAGACCATTGCACTTCGTGCCCGAAACGCCGAATATAATCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1
CDS CCA 72 bp TGGTCTTTAGGTCAAGTTTACAACCAAGATTCACTGTaGATACAATATTTTGCAGCTGCGGTACAATCCCAG +
Preference number: 6 (lower is better)
Translates to: WSLGQVYNQDSL*IQYFAAAVQSQ
Trigger: CTGGGATTGTACCGCAGCTGCAAAATATTGTATCCACAGTGAATCTTGGTTGTAAACTTGACCTAAAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000230354.10
ENST00000392092.7
ENST00000421512.5
ENST00000540980.5
ENST00000616883.4
ENST00000636632.1