RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000183751

Ensembl transcript IDs: ENST00000332704.5, ENST00000561907.5, ENST00000564171.1, ENST00000567615.1, ENST00000568546.6, ENST00000569628.5, ENST00000569792.5, ENST00000615855.4

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCACCGTGCCCACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTaGTGCACCGTCACACGCAGGGCCCTGGAGCGGCGCCCACGGCGC +
Preference number: 1 (lower is better)
Translates to: PTVPTRPSPGAIQSR*CTVTRRALERRPRR
Trigger: GCGCCGTGGGCGCCGCTCCAGGGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCGAAGGTCGGGTGGGCACGGTGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp ACCGTGCCCACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTaGACCGTCACACGCAGGGCCCTGGAGCGGCGCCCACGGCGCCAG +
Preference number: 1 (lower is better)
Translates to: TVPTRPSPGAIQSRC*TVTRRALERRPRRQ
Trigger: CTGGCGCCGTGGGCGCCGCTCCAGGGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCGAAGGTCGGGTGGGCACGGT
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp TACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCTaGGCGGGACGGGGTTCCGTGGAGGAGACGACCCGGCGGGTGAGG +
Preference number: 1 (lower is better)
Translates to: YSPRCCCGRKGWALS*AGRGSVEETTRRVR
Trigger: CCTCACCCGCCGGGTCGTCTCCTCCACGGAACCCCGTCCCGCTCAGGAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CGTCAGACCGCGGCTGGTGGCTATGCAGGTACGCGGGAGCGGGCGTaGGCAGGGCAGGCTAGCCGAGGCGGGCGGGGCCCTAACCACACC +
Preference number: 1 (lower is better)
Translates to: RQTAAGGYAGTRERA*AGQASRGGRGPNHT
Trigger: GGTGTGGTTAGGGCCCCGCCCGCCTCGGCTAGCCTGCCCTGCCCACGCCCGCTCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp TGGAGAACGAAGACCGGCAGACCGCCTGGTTTCCAGCGCCCTACCTaGAGGAGGCGGCCCCGGGCCAAGGCCGGGAGGGAGGCCCGTCCC +
Preference number: 1 (lower is better)
Translates to: WRTKTGRPPGFQRPT*RRRPRAKAGREARP
Trigger: GGGACGGGCCTCCCTCCCGGCCTTGGCCCGGGGCCGCCTCCTCCAGGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTaGCCGCGGGGGCGCGCGTGCGCGTGTTGGAAACGTCAGACCGCG +
Preference number: 1 (lower is better)
Translates to: VLPAPTRAAAQMSCP*PRGRACACWKRQTA
Trigger: CGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CGTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATaGGCGTGGCAGGGCCGAGACCATCAGCTCCAGTGCCCTTCTGGC +
Preference number: 1 (lower is better)
Translates to: RAEPRAGSLPGQGAG*AWQGRDHQLQCPSG
Trigger: GCCAGAAGGGCACTGGAGCTGATGGTCTCGGCCCTGCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGCGCGAGGATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTaGGGAGGAGCGGGGAGGGCGGATCTCCCTGGCCAGCAGGGATGG +
Preference number: 1 (lower is better)
Translates to: SARIPMRGWTAPSQG*GGAGRADLPGQQGW
Trigger: CCATCCCTGCTGGCCAGGGAGATCCGCCCTCCCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CCCCACCCCTCACGCCACCACTGCGGCTTGACCGTGTGGCAAGACTaGGCCAGAAGCACCGCGGGCAGGGCGGGCCAGGAGCCCGTGCTT +
Preference number: 1 (lower is better)
Translates to: PHPSRHHCGLTVWQD*ARSTAGRAGQEPVL
Trigger: AAGCACGGGCTCCTGGCCCGCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGCGTGAGGGGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CATGACCCCCACCGTCTAAGCGTGCGGAGCCGCGGGCTGGATCTCTaGCAGGCCAGGGTGCGGGATGGGCGTGGCAGGGCCGAGACCATC +
Preference number: 1 (lower is better)
Translates to: HDPHRLSVRSRGLDL*QARVRDGRGRAETI
Trigger: GATGGTCTCGGCCCTGCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCACGCTTAGACGGTGGGGGTCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp ACCCTGGGCCACCCTGATGCCGCGGTGGCGGCTTCCCCACGCGGCTaGCTCCCACTGGACTGCCTCCCATCAGTGACTCCCACTGGAGGC +
Preference number: 1 (lower is better)
Translates to: TLGHPDAAVAASPRG*LPLDCLPSVTPTGG
Trigger: GCCTCCAGTGGGAGTCACTGATGGGAGGCAGTCCAGTGGGAGGCAGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGTGGCCCAGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTTaGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGTACGCGGGAG +
Preference number: 1 (lower is better)
Translates to: AQMSCPCPRGRACAC*KRQTAAGGYAGTRE
Trigger: CTCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCGCCTaGTTTCCAGCGCCCTACCTGGAGGAGGCGGCCCCGGGCCAAGGC +
Preference number: 1 (lower is better)
Translates to: RTGWWLVENEDRQTA*FPAPYLEEAAPGQG
Trigger: GCCTTGGCCCGGGGCCGCCTCCTCCAGGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTaGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGG +
Preference number: 1 (lower is better)
Translates to: DAWGARAAAWRACSC*KPILGGCWRLQSAW
Trigger: CCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGCTTCTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTaGCTTGCCTGGGGGCGCCAGGGACCAGTGAAGCCCAAAGCGGCG +
Preference number: 1 (lower is better)
Translates to: SFSVRPAWVRERGRR*LAWGRQGPVKPKAA
Trigger: CGCCGCTTTGGGCTTCACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp TCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATaGGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTTGGAAAC +
Preference number: 1 (lower is better)
Translates to: SPVLCFPRLREQPRR*AVRARGGARARVGN
Trigger: GTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp GCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGG +
Preference number: 1 (lower is better)
Translates to: ARPGPRGSAASWCST*RRSAAGPFWSRRSR
Trigger: CCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR GCA 90 bp AGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTaGGCGTGTTGGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGT +
Preference number: 1 (lower is better)
Translates to: RAAAQMSCPCPRGRA*ACWKRQTAAGGYAG
Trigger: ACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CTCGGTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTaGCTGGGGGCGCCAGGGACCAGTGAAGCCCAAAGCGGCGTATCA +
Preference number: 1 (lower is better)
Translates to: LGQASLGTGAGKAVA*LGAPGTSEAQSGVS
Trigger: TGATACGCCGCTTTGGGCTTCACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTaGCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCG +
Preference number: 1 (lower is better)
Translates to: PLKVPLSVGQQGLKR*PHAFVGQQLLGGLS
Trigger: CGAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 90 bp GCCTCAGGGTCCCTCCGGATGGCCTGGATGACAGTCAGCACGGTGTaGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTAC +
Preference number: 1 (lower is better)
Translates to: ASGSLRMAWMTVSTV*GRSREMARPSARRY
Trigger: GTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGACCCTGAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR GCA 90 bp GCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTaGGCTGCCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAGGC +
Preference number: 1 (lower is better)
Translates to: ALRAASPSTVWRLRA*AACSPSVPRTRGIG
Trigger: GCCTATCCCGCGTGTCCTGGGTACAGAAGGGCTGCAGGCAGCGCAGGCTCTGAGCCTCCAGACTGTGGATGGAGAGGCGGCCCGCAGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTaGAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAG +
Preference number: 1 (lower is better)
Translates to: HCWDAWGARAAAWRA*SCWKPILGGCWRLQ
Trigger: CTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GACTCCCACTGGAGGCCCTTCGTCCCTGCTGAAGCTCCCAGCCCCTaGCATCCGGGTGAGGGACCCCGCCCTCTCAAGGGTGCACAGTGG +
Preference number: 1 (lower is better)
Translates to: DSHWRPFVPAEAPSP*HPGEGPRPLKGAQW
Trigger: CCACTGTGCACCCTTGAGAGGGCGGGGTCCCTCACCCGGATGGCAGGGGCTGGGAGCTTCAGCAGGGACGAAGGGCCTCCAGTGGGAGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GTCAGGCCAGCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTaGGGGCGCCAGGGACCAGTGAAGCCCAAAGCGGCGTATCACAGT +
Preference number: 1 (lower is better)
Translates to: VRPAWVRERGRRWLA*GRQGPVKPKAAYHS
Trigger: ACTGTGATACGCCGCTTTGGGCTTCACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTaGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTGGGGGCGCCAG +
Preference number: 1 (lower is better)
Translates to: GDLTAFSQSFSVRPA*VRERGRRWLAWGRQ
Trigger: CTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTaGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGC +
Preference number: 1 (lower is better)
Translates to: GASRLKSTPSTAWAS*QCRELVFHVTQKRS
Trigger: GCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 90 bp AGCTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTaGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAG +
Preference number: 1 (lower is better)
Translates to: SSSGASRLKSTPSTA*ASWQCRELVFHVTQ
Trigger: CTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR TCA 90 bp CATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTaGTCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTCGCGCTGCGG +
Preference number: 1 (lower is better)
Translates to: HPPTSHSYGLPFPAG*SCPPQRSSLFLALR
Trigger: CCGCAGCGCGAGAAAGAGGCTGCTCCTCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp TGGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTaGTGCCGCGGTGGCGGCTTCCCCACGCGGCTGCCTCCCACTGGA +
Preference number: 1 (lower is better)
Translates to: WDEFRQLKVSDPGPP*CRGGGFPTRLPPTG
Trigger: TCCAGTGGGAGGCAGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGTGGCCCAGGGTCACTCACCTTGAGCTGCCTGAATTCGTCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CCCAGTTTCACCCTCCCCATCCGCCTACCTCTCACTCGTACGGGCTaGCCTTCCCAGCCGGGTGATCCTGCCCACCCCAGAGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: PSFTLPIRLPLTRTG*PSQPGDPAHPRGAA
Trigger: GGCTGCTCCTCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGGGAGGGTGAAACTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GCGGCCTGGCGCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTaGTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTG +
Preference number: 1 (lower is better)
Translates to: AAWRACSCWKPILGG*WRLQSAWHGARRSL
Trigger: CAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp TCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCAGTaGCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: SRLKSTPSTAWASWQ*RELVFHVTQKRSRA
Trigger: GGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 90 bp GTCTTAGAGCGGCCCCGCCGTCAGCAGACTCAAGCAAGGAGAATGTaGAGAAGGGTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTG +
Preference number: 1 (lower is better)
Translates to: VLERPRRQQTQARRM*RRVRAGLVLCGPAV
Trigger: CACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCACCCTTCTCCACATTCTCCTTGCTTGAGTCTGCTGACGGCGGGGCCGCTCTAAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GCAGAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATaGTGGCTTCCAGCTTCTCGCAGGCCTCAGGGTCCCTCCGGATGG +
Preference number: 1 (lower is better)
Translates to: AEAQQGLSGRAAVGA*WLPASRRPQGPSGW
Trigger: CCATCCGGAGGGACCCTGAGGCCTGCGAGAAGCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR TCA 90 bp TGTGGAGAAGGGTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTaGCTCCAAACACCCACTCCCACCAGGTCCCCAGTTCTGTGCTTC +
Preference number: 1 (lower is better)
Translates to: CGEGCGRASSSVAPR*LQTPTPTRSPVLCF
Trigger: GAAGCACAGAACTGGGGACCTGGTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCACCCTTCTCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGCAAGGAGAATGTGGAGAAGGGTGCGGGCGGGCCTCGTCCTCTGTaGCCCCGCGGTGACTCCAAACACCCACTCCCACCAGGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: SKENVEKGAGGPRPL*PRGDSKHPLPPGPQ
Trigger: CTGGGGACCTGGTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCACCCTTCTCCACATTCTCCTTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GCCTGGCGCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTaGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCT +
Preference number: 1 (lower is better)
Translates to: AWRACSCWKPILGGC*RLQSAWHGARRSLA
Trigger: AGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AAGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTaGCGCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: KMHHCWDAWGARAAA*RACSCWKPILGGCW
Trigger: CCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTCCCGGTaGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCAAAGC +
Preference number: 1 (lower is better)
Translates to: ALVPALRRPSRRPSR*RRACCGDLTAFSQS
Trigger: GCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGGGAAGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CCTGGACCCGAGGGAGCCTCGAGATTTGAGTCCCTGCCCGCTTCTTaGGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCG +
Preference number: 1 (lower is better)
Translates to: PGPEGASRFESLPAS*AQAGGWWRTKTGRP
Trigger: CGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTGCGCTaGCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAGGCCTTTT +
Preference number: 1 (lower is better)
Translates to: AGRLSIHSLEAQSLR*LQPFCTQDTRDRPF
Trigger: AAAAGGCCTATCCCGCGTGTCCTGGGTACAGAAGGGCTGCAGGCAGCGCAGGCTCTGAGCCTCCAGACTGTGGATGGAGAGGCGGCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp ATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTaGGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTG +
Preference number: 1 (lower is better)
Translates to: IAFHRRVTLPSCQAH*ASSNARLAVTSTSL
Trigger: CAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR GCA 90 bp GCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTaGAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTTCTTCGC +
Preference number: 1 (lower is better)
Translates to: APAAVGNLFSEAAGD*RARGTEPDDHWLLR
Trigger: GCGAAGAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GCCCTCAGAAGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGGCCTaGTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGG +
Preference number: 1 (lower is better)
Translates to: ALRRPSRRPSRWRRA*CGDLTAFSQSFSVR
Trigger: CCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGGGAAGGTCTCCTTGAGGGTCTTCTGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp TCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATaGAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACCTGCTCCTCT +
Preference number: 1 (lower is better)
Translates to: SREMARPSARRYRFS*SRLSSSCCLTTCSS
Trigger: AGAGGAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 90 bp GCGTATCACAGTACGTTTTTGTGGTGCCTTAAGATGCACCACTGTTaGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: AYHSTFLWCLKMHHC*DAWGARAAAWRACS
Trigger: GCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp ATCCGGGTGAGGGACCCCGCCCTCTCAAGGGTGCACAGTGGGCTCTaGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGG +
Preference number: 1 (lower is better)
Translates to: IRVRDPALSRVHSGL*KTNALVPALRRPSR
Trigger: CCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCACCCTTGAGAGGGCGGGGTCCCTCACCCGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp AGGGATTTGCTCCTCTGCTCCTGGACCCGAGGGAGCCTCGAGATTTaGGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAG +
Preference number: 1 (lower is better)
Translates to: RDLLLCSWTRGSLEI*VPARFLRTGWWLVE
Trigger: CTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGCAAATCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GCTCCTCTGCTCCTGGACCCGAGGGAGCCTCGAGATTTGAGTCCCTaGCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGA +
Preference number: 1 (lower is better)
Translates to: APLLLDPREPRDLSP*PLLAHRLVAGGERR
Trigger: TCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CTCAGAAGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGGCCTGCTaGGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: LRRPSRRPSRWRRAC*GDLTAFSQSFSVRP
Trigger: TGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGGGAAGGTCTCCTTGAGGGTCTTCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGATTTGAGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTaGAGAACGAAGACCGGCAGACCGCCTGGTTTCCAGCGCCCTACC +
Preference number: 1 (lower is better)
Translates to: RFESLPASCAQAGGW*RTKTGRPPGFQRPT
Trigger: GGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp TCGAGATTTGAGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTaGTGGAGAACGAAGACCGGCAGACCGCCTGGTTTCCAGCGCCCT +
Preference number: 1 (lower is better)
Translates to: SRFESLPASCAQAGG*WRTKTGRPPGFQRP
Trigger: AGGGCGCTGGAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp TGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTaGCACGGAGCCCGACGATCACTGGCTTCTTCGCACCGCAACCCC +
Preference number: 1 (lower is better)
Translates to: CWKPILGGCWRLQSA*HGARRSLASSHRNP
Trigger: GGGGTTGCGGTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CCGCCCTCTCAAGGGTGCACAGTGGGCTCTGGAAGACCAATGCCCTaGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTCCCGGTGGA +
Preference number: 1 (lower is better)
Translates to: PPSQGCTVGSGRPMP*FPPSEDPQGDLPGG
Trigger: TCCACCGGGAAGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCACCCTTGAGAGGGCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp TCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTaGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCC +
Preference number: 1 (lower is better)
Translates to: SVRWSDGSDTFVRRS*DEFRQLKVSDPGPP
Trigger: GGGTGGCCCAGGGTCACTCACCTTGAGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp AGCCCAAAGCGGCGTATCACAGTACGTTTTTGTGGTGCCTTAAGATaGACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGC +
Preference number: 1 (lower is better)
Translates to: SPKRRITVRFCGALR*TTVGTRGAHEPRPG
Trigger: GCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CTCAAGCACGGGGAGGCAGAAGGGTCCTCGCCCATTTCAGGAATCTaGAGCCTGGAAGCCACAGCCATGGCAGGCCCCCGATACCCAGTT +
Preference number: 1 (lower is better)
Translates to: LKHGEAEGSSPISGI*SLEATAMAGPRYPV
Trigger: AACTGGGTATCGGGGGCCTGCCATGGCTGTGGCTTCCAGGCTGCAGATTCCTGAAATGGGCGAGGACCCTTCTGCCTCCCCGTGCTTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp GACTGCAGTCCAGAGAGACAGAGCCGGCCAGGAGAGCGGCCTTTATaGGTTTTCCAGGGGTTCAGGATGGACTGGAGAGAGGCCGGACCG +
Preference number: 1 (lower is better)
Translates to: DCSPERQSRPGERPL*VFQGFRMDWREAGP
Trigger: CGGTCCGGCCTCTCTCCAGTCCATCCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTCCTGGCCGGCTCTGTCTCTCTGGACTGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGTACGTTTTTGTGGTGCCTTAAGATGCACCACTGTTGGGACGCGTaGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTGGAAA +
Preference number: 1 (lower is better)
Translates to: STFLWCLKMHHCWDA*GARAAAWRACSCWK
Trigger: TTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp GGGAGGGGGCCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATaGCCCCCACCGTCTAAGCGTGCGGAGCCGCGGGCTGGATCTCTG +
Preference number: 1 (lower is better)
Translates to: GRGPFAVPLSKACSA*PPPSKRAEPRAGSL
Trigger: CAGAGATCCAGCCCGCGGCTCCGCACGCTTAGACGGTGGGGGTCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGGCCCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CACGGCACTCCCAACTTTTTGTCCCCCAGACGTTTGCCTTCTCTGTaGGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: HGTPNFLSPRRLPSL*AGQTAATPSCAGVG
Trigger: CCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTGCCGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTaGACGCCTCCAGGGCTGGAAAGCTCATTCTTCTTCTTCCTCCCA +
Preference number: 1 (lower is better)
Translates to: APGSSPAYPSPLLQS*TPPGLESSFFFFLP
Trigger: TGGGAGGAAGAAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CCAGGTCAGCTGGGCCCTCAGCTGAGACAGGGAGAAGGTGACAGCTaGCTGGGGGAACCCTGCAAATCAGCCCTATGTGAGCAGGTGTTC +
Preference number: 1 (lower is better)
Translates to: PGQLGPQLRQGEGDS*LGEPCKSALCEQVF
Trigger: GAACACCTGCTCACATAGGGCTGATTTGCAGGGTTCCCCCAGCCAGCTGTCACCTTCTCCCTGTCTCAGCTGAGGGCCCAGCTGACCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp CTTTGTTGCAGCCAGGGCAGCTTCCTGGAGGGATGCCTTAGAGGCTaGCTGCTCCCTGAAGGGGCTGGAGTAGGTGCATCCCAACACAGA +
Preference number: 1 (lower is better)
Translates to: LCCSQGSFLEGCLRG*LLPEGAGVGASQHR
Trigger: TCTGTGTTGGGATGCACCTACTCCAGCCCCTTCAGGGAGCAGTCAGCCTCTAAGGCATCCCTCCAGGAAGCTGCCCTGGCTGCAACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp GGACCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTGGTaGCTTAAGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCC +
Preference number: 1 (lower is better)
Translates to: GPVKPKAAYHSTFLW*LKMHHCWDAWGARA
Trigger: GGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTTCACTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CACTCCCAACTTTTTGTCCCCCAGACGTTTGCCTTCTCTGTGCGCTaGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAA +
Preference number: 1 (lower is better)
Translates to: HSQLFVPQTFAFSVR*SDGSDTFVRRSWDE
Trigger: TTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 90 bp CCTCAGCTGAGACAGGGAGAAGGTGACAGCTGGCTGGGGGAACCCTaGAAATCAGCCCTATGTGAGCAGGTGTTCATTGCCCATGCCAAG +
Preference number: 1 (lower is better)
Translates to: PQLRQGEGDSWLGEP*KSALCEQVFIAHAK
Trigger: CTTGGCATGGGCAATGAACACCTGCTCACATAGGGCTGATTTGCAGGGTTCCCCCAGCCAGCTGTCACCTTCTCCCTGTCTCAGCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp CAGGGACCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTaGTGCCTTAAGATGCACCACTGTTGGGACGCGTGGGGCGCACGA +
Preference number: 1 (lower is better)
Translates to: QGPVKPKAAYHSTFL*CLKMHHCWDAWGAR
Trigger: TCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTTCACTGGTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp CAGGTGTTCATTGCCCATGCCAAGACCAGGGACAGCTTGAGGGCATaGGAGAGAGTGCTGGTGGGACAGACACACAAAGGCCCTTTGTTG +
Preference number: 1 (lower is better)
Translates to: QVFIAHAKTRDSLRA*ERVLVGQTHKGPLL
Trigger: CAACAAAGGGCCTTTGTGTGTCTGTCCCACCAGCACTCTCTCTCATGCCCTCAAGCTGTCCCTGGTCTTGGCATGGGCAATGAACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 90 bp AGTCCTTGGTTCTGCACAGAAATCCCCAGGCCAGTTCAAAGTTGTTaGGCGCACCCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATC +
Preference number: 1 (lower is better)
Translates to: SPWFCTEIPRPVQSC*AHPGRAITSQGRGI
Trigger: GATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGGATTTCTGTGCAGAACCAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 90 bp CTCTGCCCAGGCCATGTTTGCAGTAAGTCATGGCAAATCGTGAATTaGGAGGTGGTTCTCAAAACAGCCCTAGTGACCACTTCCCTGACC +
Preference number: 1 (lower is better)
Translates to: LCPGHVCSKSWQIVN*EVVLKTALVTTSLT
Trigger: GGTCAGGGAAGTGGTCACTAGGGCTGTTTTGAGAACCACCTCTCAATTCACGATTTGCCATGACTTACTGCAAACATGGCCTGGGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGGAGGCTGGCGGTCTTaGCGGGGTGGCGCCCCCAGT +
Preference number: 2 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLGGWRS*RGGAPS
Trigger: ACTGGGGGCGCCACCCCGGCAAGACCGCCAGCCTCC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCCCTTCCCAGCCGGGTaGTCCTGCCCACCCCAGAGG +
Preference number: 2 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLPFPAG*SCPPQR
Trigger: CCTCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGG...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTGGCTGGGCGCTCTCCTaGGCGGGACGGGGTTCCGTG +
Preference number: 2 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPGWALS*AGRGSV
Trigger: CACGGAACCCCGTCCCGCTCAGGAGAGCGCCCAGCC...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACGAGCAGCCGCGCAGATaGGCTGTCCGTGCCCGCGGG +
Preference number: 2 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHEQPRR*AVRARG
Trigger: CCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTC...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGCCTGGACGTGCTGCTaGGGCACCCCTCAGGTAGGG +
Preference number: 2 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLAWTCC*GTPQVG
Trigger: CCCTACCTGAGGGGTGCCGCAGCAGCACGTCCAGGC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACACGCGGGAGCGGGCGTaGGCAGGGCAGGCTAGCCGA +
Preference number: 2 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHTRERA*AGQASR
Trigger: TCGGCTAGCCTGCCCTGCCCACGCCCGCTCCCGCGT...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCTACTCCCCGCGGTGCTaGTGCGGCCGGAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSYSPRC*CGRKGW
Trigger: CCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTA...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCGCGGCTGGTGGCTATaGAGGTACGCGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSRGWWL*RYAGAG
Trigger: GCCCGCTCCCGCGTACCTGCATAGCCACCAGCCGCG...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTGCGGAGCCGCGGGCTaGATCTCTGCCAGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPCGAAG*ISARPG
Trigger: CCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp CGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTaGGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGTACGCGGGA +
Preference number: 2 (lower is better)
Translates to: RADELSVPAGARVRV*ETSDRGWWLCRYAG
Trigger: TCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp GGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTaGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTG +
Preference number: 2 (lower is better)
Translates to: GRVGRTSRGLARLQL*ETYSRRLLATAERV
Trigger: CACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGAATGTGGAGAAGGGTaGGGGCGGGCCTCGTCCTCT +
Preference number: 2 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLECGEG*GRASSS
Trigger: AGAGGACGAGGCCCGCCCGCACCCTTCTCCACATTC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGACGTCAGACCGCGGCTaGTGGCTATGCAGGTACGCG +
Preference number: 2 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLTSDRG*WLCRYA
Trigger: CGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGT...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCTCTGTGGCCCCGCGGTaGCTCCAAACACCCACTCCC +
Preference number: 2 (lower is better)
Translates to: GRPVPREQRYAPNPTPHASVAPR*LQTPTP
Trigger: GGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGA...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGCAGATGAGCTGTCCGTaGCCGCGGGGGCGCGCGTGC +
Preference number: 2 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTQMSCP*PRGRAC
Trigger: GCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTG...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGCGGGACGGGGTTCCGTaGAGGAGACGACCCGGCGGG +
Preference number: 2 (lower is better)
Translates to: GPQFCASRAYESSRADELRDGVP*RRRPGG
Trigger: CCCGCCGGGTCGTCTCCTCCACGGAACCCCGTCCCG...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCACCGTGTGGCAAGACTaGGCCAGAAGCACCGCGGGC +
Preference number: 2 (lower is better)
Translates to: GRPVPREQRYAPNPTPHATVWQD*ARSTAG
Trigger: GCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp CTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGTCCGGATGGCCTGGATaGCAGTCAGCACGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: LLGGLSPQEHTQHGLGLVSGWPG*QSARCG
Trigger: CCCACACCGTGCTGACTGTCATCCAGGCCATCCGGA...CACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCATCCCGATGAGGGGATaGACCGCGCCATCCCAGGGC +
Preference number: 2 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGIPMRG*TAPSQG
Trigger: GCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGAT...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTCCAGGGGTTCAGGATaGACTGGAGAGAGGCCGGAC +
Preference number: 2 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPSRGSG*TGERPD
Trigger: GTCCGGCCTCTCTCCAGTCCATCCTGAACCCCTGGA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCGCGGGCTGGATCTCTaGCAGGCCAGGGTGCGGGAT +
Preference number: 2 (lower is better)
Translates to: CPLLAHRLVAGGERRPADRGLDL*QARVRD
Trigger: ATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCG...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTATGGGCCTCGTGGCAGTaGCGCGAGTTGGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVWASWQ*RELVFH
Trigger: GTGGAACACCAACTCGCGGCACTGCCACGAGGCCCA...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCAGGCGGTGGCTTGCCTaGGGGCGCCAGGGACCAGTG +
Preference number: 2 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGRRWLA*GRQGPV
Trigger: CACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCT...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGGCCGCAGTCGGAGCATaGTGGCTTCCAGCTTCTCGC +
Preference number: 2 (lower is better)
Translates to: GGLEGPAEPLKVPLSVGQAAVGA*WLPASR
Trigger: GCGAGAAGCTGGAAGCCACCATGCTCCGACTGCGGC...CTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CAA 90 bp AAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCCTTTCTGGTC +
Preference number: 2 (lower is better)
Translates to: KSTPSTAWASWQCRE*VFHVTQKRSRAFLV
Trigger: GACCAGAAAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR TCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGCGCGAGGATCCCGATaGGGGGATGGACCGCGCCAT +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEARGSR*GDGPRH
Trigger: ATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCACCCGGCAGGTGCCTaGCTCGCCCCAAACTCCCAG +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEHPAGA*LAPNSQ
Trigger: CTGGGAGTTTGGGGCGAGTCAGGCACCTGCCGGGTG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVSWCST*RRSAAG
Trigger: CCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACT...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR GCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGGCCGCCCTCGAGGGTaGGTGGACTCTGTGCCGCAC +
Preference number: 2 (lower is better)
Translates to: RPPIPSFSARGSPGADQEGRPRG*VDSVPH
Trigger: GTGCGGCACAGAGTCCACGCACCCTCGAGGGCGGCC...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGCCGCGGGGGCGCGCGTaGGCGTGTTGGAAACGTCAG +
Preference number: 2 (lower is better)
Translates to: RPPIPSFSARGSPGADQEPRGRA*ACWKRQ
Trigger: CTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGG...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGAGGCTGCTGGCGACTaGAGAGCGCGTGGCACGGAG +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEEAAGD*RARGTE
Trigger: CTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACCTaGTCCTCTTGCCTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: ARPSARRYRFSCSRLSSSCCLTT*SSCLAC
Trigger: GCAGGCCAGGCAAGAGGAGCAGGTGGTCAGGCAGCA...AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR GCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGAGGTTGTCCAGCTCTTaGTGCCTGACCACCTGCTCC +
Preference number: 2 (lower is better)
Translates to: AAQCRAAGPQALPARLRRRLSSS*CLTTCS
Trigger: GGAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCT...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGGCCAGGGTGCGGGATaGGCGTGGCAGGGCCGAGAC +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPGQGAG*AWQGRD
Trigger: GTCTCGGCCCTGCCACGCCCATCCCGCACCCTGGCC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGCCCTCGAGGGTGCGTaGACTCTGTGCCGCACCCCA +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEALEGA*TLCRTP
Trigger: TGGGGTGCGGCACAGAGTCCACGCACCCTCGAGGGC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGTTCCAGCGCCCTACCTaGAGGAGGCGGCCCCGGGCC +
Preference number: 2 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLFQRPT*RRRPRA
Trigger: GGCCCGGGGCCGCCTCCTCCAGGTAGGGCGCTGGAA...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACACGCAACCCCTGGACCTaGAGCCCGCGCTGCCACCCG +
Preference number: 2 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTRNPWT*SPRCHP
Trigger: CGGGTGGCAGCGCGGGCTCCAGGTCCAGGGGTTGCG...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTGCACGAGCCGCGGCCTaGCGCGCCTGCAGCTGTTGG +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPARAAA*RACSCW
Trigger: CCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGC...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCCACTGTTGGGACGCGTaGGGCGCACGAGCCGCGGCC +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPHCWDA*GARAAA
Trigger: GGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTG...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGGCAGCAGGGCCTTTCTaGTCGCGCCGCAGTCGGAGC +
Preference number: 2 (lower is better)
Translates to: GRRPAQGASCCATGSPRKAAGPF*SRRSRS
Trigger: GCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGC...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR TCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGGGGAGCCTCGAGATTTaGGTCCCTGCCCGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTGSLEI*VPARFL
Trigger: CAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCC...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTACCAGCTCTTGCTGCCTaGCCACCTGCTCCTCTTGCC +
Preference number: 2 (lower is better)
Translates to: ESGGLEGPAEPLKVPLSVPALAA*PPAPLA
Trigger: GGCAAGAGGAGCAGGTGGTCAGGCAGCAAGAGCTGG...TACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGGTGCGTGGACTCTGTaGCGCACCCCACGACGGAGC +
Preference number: 2 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDGAWTL*RTPRRS
Trigger: GCTCCGTCGTGGGGTGCGGCACAGAGTCCACGCACC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGATCCAGAGCCGCTGCTaGACCGTCACACGCAGGGCC +
Preference number: 2 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWIQSRC*TVTRRA
Trigger: GGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGAT...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACCGAGATTTGAGTCCCTaGCCGCTTCTTGCGCACAGG +
Preference number: 2 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHRDLSP*PLLAHR
Trigger: CCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCG...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGGGCCTCGTCCTCTGTaGCCCCGCGGTGACTCCAAA +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEGPRPL*PRGDSK
Trigger: TTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTCCAGGAGCCCGTGCTTaGTCTCCGCACCTAGAGGAA +
Preference number: 2 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPPGARA*SPHLEE
Trigger: TTCCTCTAGGTGCGGAGACCAAGCACGGGCTCCTGG...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTTCGGTCAGGCCAGCCTaGGTACGGGAGCGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLSVRPA*VRERGR
Trigger: CCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGA...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCATCCCTCCGGATGGCCTaGATGACAGTCAGCACGGTG +
Preference number: 2 (lower is better)
Translates to: EAQQGLSGRAAVGAWWLPSLRMA*MTVSTV
Trigger: CACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGA...TGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CCA 90 bp GCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCAGTCGGAGCATGGTaGCTTCCAGCTTCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: ASWQCRELVFHVTQKRSRAVGAW*LPASRR
Trigger: CCTGCGAGAAGCTGGAAGCCACCATGCTCCGACTGC...CCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CAA 90 bp CAGGGATTTGCTCCTCTGCTCCTGGACCCGAGGGAGCCTCGAGATTaGAGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: QGFAPLLLDPREPRD*SPCPLLAHRLVAGG
Trigger: TCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGCAAATCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGCTCAGAGCCTGCGCTaGCTGCAGCCCTTCTGTACC +
Preference number: 2 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWAQSLR*LQPFCT
Trigger: GGTACAGAAGGGCTGCAGGCAGCGCAGGCTCTGAGC...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGGCCTCTTTCTCGCGCTaGGGGCCGCCTCTCCATCCA +
Preference number: 2 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLASFSR*GPPLHP
Trigger: TGGATGGAGAGGCGGCCCGCAGCGCGAGAAAGAGGC...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCAGTGCCCTTCTGGCTaGCTAGGTAGGGTGTTGGCC +
Preference number: 2 (lower is better)
Translates to: CPLLAHRLVAGGERRPADQCPSG*LGRVLA
Trigger: GGCCAACACCCTACCTAGCCAGCCAGAAGGGCACTG...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTGGTGCGGGATGGGCGTaGCAGGGCCGAGACCATCAG +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPGAGWA*QGRDHQ
Trigger: CTGATGGTCTCGGCCCTGCCACGCCCATCCCGCACC...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCAGGCCCAGGAGAGCCTaGACGTGCTGCTGCGGCACC +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPRPRRA*TCCCGT
Trigger: GGTGCCGCAGCAGCACGTCCAGGCTCTCCTGGGCCT...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCGCCTTCTCTGTGCGCTaGTCAGACGGCAGCGACACC +
Preference number: 2 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGAFSVR*SDGSDT
Trigger: GGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGC...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTGAGCGCAGCAATGCCCGACTaGCTGTCACCAGCACCTCGT +
Preference number: 2 (lower is better)
Translates to: VYRLPQAGNAALLPGPLSAAMPD*LSPAPR
Trigger: ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGC...GCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR CAA 90 bp GGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTaGCACGCCTCCAGGGCTGGAAAGCTCATTCTTCTTCTTCCTCCC +
Preference number: 2 (lower is better)
Translates to: GPRQQSRLPFAPSSV*HASRAGKLILLLPP
Trigger: GGGAGGAAGAAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACAGCCATCCAGAGCCGCTaGTGCACCGTCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTAIQSR*CTVTRR
Trigger: CCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGC...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCTCACTCGTACGGGCTaGCCTTCCCAGCCGGGTGAT +
Preference number: 2 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLLTRTG*PSQPGD
Trigger: ATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGGGATAGGAAGGGGGTaGCTGGACCAGCACCTCCAC +
Preference number: 2 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDGIGRG*LDQHLH
Trigger: GTGGAGGTGCTGGTCCAGGCACCCCCTTCCTATCCC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTCGCGCGTGCGCGTGTTaGAAACGTCAGACCGCGGCT +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPRACAC*KRQTAA
Trigger: AGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCG...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGACCGGCAGACCGCCTaGTTTCCAGCGCCCTACCTG +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPDRQTA*FPAPYL
Trigger: CAGGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGATTCTCGGAGGCTGCTaGCGACTGCAGAGCGCGTGG +
Preference number: 2 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLILGGC*RLQSAW
Trigger: CCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAAT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGAAGATGCACCACTGTTaGGACGCGTGGGGCGCACGA +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEKMHHC*DAWGAR
Trigger: TCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTT...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp GACCAGCACCTCCACGGCACTCCCAACTTTTTGTCCCCCAGACGTTaGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGC +
Preference number: 2 (lower is better)
Translates to: DQHLHGTPNFLSPRR*PSLCAGQTAATPSC
Trigger: GCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTGCCGTGGAGGTGCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTGGAGGCTCAGAGCCTaGGCTGCCTGCAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPWRLRA*AACSPS
Trigger: AGAAGGGCTGCAGGCAGCGCAGGCTCTGAGCCTCCA...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGTGCCTCCCACTGGACTaGCTCCCATCAGTGACTCCC +
Preference number: 2 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLCLPLD*LPSVTP
Trigger: GGGAGTCACTGATGGGAGGCAGTCCAGTGGGAGGCA...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTCCTGGCCAGCAGGGATaGGAGGGGGCCATTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPPGQQG*EGAICC
Trigger: ACAGCAAATGGCCCCCTCCCATCCCTGCTGGCCAGG...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACATCAGACCGCGGCTGGTaGCTATGCAGGTACGCGGGA +
Preference number: 2 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTSDRGW*LCRYAG
Trigger: TCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGA...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCAGGCTGGTGGCTGGTaGAGAACGAAGACCGGCAGA +
Preference number: 2 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLQAGGW*RTKTGR
Trigger: TCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCGCGCCTGCAGCTGTTaGAAACCTATTCTCGGAGGC +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQERACSC*KPILGG
Trigger: GCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCCATTTGCTGTTCCTCTaGGTAAAGCTTGTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAHLLFL*VKLVLH
Trigger: ATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATG...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACAGCTCTGGAAGACCAATaGCCTGGTTCCCGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTALEDQ*PGSRPQ
Trigger: CTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGC...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGATACCCAGTTTCAGTaGAAGGGGCAGCCCTGGTGC +
Preference number: 2 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDDTQFQ*KGQPWC
Trigger: GCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAGTCCCCCAATCCCTGTaGTCCTGCCCCCAGATCGTG +
Preference number: 2 (lower is better)
Translates to: WPQHEEKPLCARVECGFRVPQSL*SCPQIV
Trigger: CACGATCTGGGGGCAGGAGCACAGGGATTGGGGGAC...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGGAGAGCGGCCTTTATaGGTTTTCCAGGGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEGERPL*VFQGFR
Trigger: CCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTCC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGTTCTTGCGCACAGGCTaGTGGCTGGTGGAGAACGAA +
Preference number: 2 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWFLRTG*WLVENE
Trigger: TTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAA...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCAATAGGGGCAGAGAGTaGGAGGCTGGCGGTCTTGCC +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPNRGRE*EAGGLA
Trigger: GGCAAGACCGCCAGCCTCCCACTCTCTGCCCCTATT...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGTGCAAGGGGCAGCCCTaGTGCAGATCAAGAGGCTCC +
Preference number: 2 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLCKGQP*CRSRGS
Trigger: GGAGCCTCTTGATCTGCACCAGGGCTGCCCCTTGCA...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp CGCCAGGGACCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTaGTGGTGCCTTAAGATGCACCACTGTTGGGACGCGTGGGGCGCA +
Preference number: 2 (lower is better)
Translates to: RQGPVKPKAAYHSTF*WCLKMHHCWDAWGA
Trigger: TGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTTCACTGGTCCCTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGACCTGCTGCGGAGATCTaGCCGCGTTCTCCCAAAGCT +
Preference number: 2 (lower is better)
Translates to: WPQHEEKPLCARVECGFRPAAEI*PRSPKA
Trigger: AGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGG...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTTGGCTGGGGGAACCCTaGAAATCAGCCCTATGTGAG +
Preference number: 2 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLWLGEP*KSALCE
Trigger: CTCACATAGGGCTGATTTGCAGGGTTCCCCCAGCCA...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGAGGTACCGCTTCTCATaGAGCAGGTTGTCCAGCTCT +
Preference number: 2 (lower is better)
Translates to: GRRPAQGASCCATGSPRKRYRFS*SRLSSS
Trigger: AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTTGCGCACAGGCTGGTaGCTGGTGGAGAACGAAGAC +
Preference number: 2 (lower is better)
Translates to: LWKTNALVPALRRPSRRPLRTGW*LVENED
Trigger: GTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAA...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATATTGCTCCTCTGCTCCTaGACCCGAGGGAGCCTCGAG +
Preference number: 2 (lower is better)
Translates to: GEPVRSAPPPACIEQLTILLLCS*TRGSLE
Trigger: CTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGCAA...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGGAAGACCAATGCCCTaGTTCCCGCCCTCAGAAGAC +
Preference number: 2 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPGRPMP*FPPSED
Trigger: GTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGTGCACAGTGGGCTCTaGAAGACCAATGCCCTGGTT +
Preference number: 2 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDVHSGL*KTNALV
Trigger: AACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCAC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGCAAGTAAGACCTGGCTaGGTCCTTAGTGGCCCCAAG +
Preference number: 2 (lower is better)
Translates to: RPPIPSFSARGSPGADQEQVRPG*VLSGPK
Trigger: CTTGGGGCCACTAAGGACCCAGCCAGGTCTTACTTG...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCCACCACTGCGGCTTaGCCGTGTGGCAAGACTGGG +
Preference number: 2 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYATTAA*PCGKTG
Trigger: CCCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGC...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAGACCATCAGCTCCAGTaGCCTTCTGGCTGGCTAGGT +
Preference number: 2 (lower is better)
Translates to: WPQHEEKPLCARVECGFRDHQLQ*PSGWLG
Trigger: ACCTAGCCAGCCAGAAGGGCACTGGAGCTGATGGTC...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGGGAAGGCGGTGGCTTaGCTGGGGGCGCCAGGGACC +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLGKAVA*LGAPGT
Trigger: GGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACAGCGGCGTTTGGAGCTaGGAGAGGTCCAGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYSGVWS*ERSRVG
Trigger: CCCCACCCTGGACCTCTCCCAGCTCCAAACGCCGCT...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCCCTCACGCCACCACTaGGGCTTGACCGTGTGGCAA +
Preference number: 2 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYPSRHH*GLTVWQ
Trigger: TTGCCACACGGTCAAGCCGCAGTGGTGGCGTGAGGG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATATCTCCATCCACAGTCTaGAGGCTCAGAGCCTGCGCT +
Preference number: 2 (lower is better)
Translates to: GEPVRSAPPPACIEQLTISPSTV*RLRACA
Trigger: AGCGCAGGCTCTGAGCCTCCAGACTGTGGATGGAGA...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp AGAACTGGTGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTaGAATGTGGCTTCCGAAGCCCGAACTATAAGGAAGCAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RTGGPSTRKNHCVPG*NVASEARTIRKQPE
Trigger: CTCTGGCTGCTTCCTTATAGTTCGGGCTTCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCACCAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGAAGCTCCCAGCCCCTaGCATCCGGGTGAGGGACCC +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLEAPSP*HPGEGP
Trigger: GGGTCCCTCACCCGGATGGCAGGGGCTGGGAGCTTC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGCGGTCTTGCCGGGGTaGCGCCCCCAGTTTCACCCT +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLAVLPG*RPQFHP
Trigger: AGGGTGAAACTGGGGGCGCCACCCCGGCAAGACCGC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGGCGCCAGGGACCAGTaGAGCCCAAAGCGGCGTATC +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLGARDQ*SPKRRI
Trigger: GATACGCCGCTTTGGGCTTCACTGGTCCCTGGCGCC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGATGCCCAGGCCATGTTTaGAGTAAGTCATGGCAAATC +
Preference number: 2 (lower is better)
Translates to: WPQHEEKPLCARVECGFRCPGHV*SKSWQI
Trigger: GATTTGCCATGACTTACTGCAAACATGGCCTGGGCA...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTACCCAAACTCCCAGCATaGAGCGGCGTTTGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLPKLPA*SGVWSW
Trigger: CCAGCTCCAAACGCCGCTGCATGCTGGGAGTTTGGG...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTACCCAGCAGCTCTGCCTaGAAGTCCCCCAATCCCTGT +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLPSSSA*KSPNPC
Trigger: ACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGG...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTACCCAGATCGTGGGCTTaGGGGACAGCAAGAAAGCTG +
Preference number: 2 (lower is better)
Translates to: RSAPPPACIEQLTIITHLPRSWA*GTARKL
Trigger: CAGCTTTCTTGCTGTCCCCCAAGCCCACGATCTGGG...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR TCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACACATTTCCTCCTCTATaGGTTGGGGACATTAAGAGA +
Preference number: 2 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYTFPPL*VGDIKR
Trigger: TCTCTTAATGTCCCCAACTCATAGAGGAGGAAATGT...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 90 bp AGGATTAAGTCAGACAAAGCACTTAAAGCTGTAAGCACTGAGTCCTaGGTTCTGCACAGAAATCCCCAGGCCAGTTCAAAGTTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: RIKSDKALKAVSTES*VLHRNPQASSKLLG
Trigger: GCCCAACAACTTTGAACTGGCCTGGGGATTTCTGTGCAGAACCAAGGACTCAGTGCTTACAGCTTTAAGTGCTTTGTCTGACTTAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CCCACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTaGTGCACCGTCACACGCAGGGCCCTGGAGCGGCGC +
Preference number: 3 (lower is better)
Translates to: PTRPSPGAIQSR*CTVTRRALERR
Trigger: GCGCCGCTCCAGGGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCGAAGGTCGGGTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 72 bp CGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCTaGGCGGGACGGGGTTCCGTGGAGGAGACGACCCGG +
Preference number: 3 (lower is better)
Translates to: RCCCGRKGWALS*AGRGSVEETTR
Trigger: CCGGGTCGTCTCCTCCACGGAACCCCGTCCCGCTCAGGAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 72 bp CTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATaGGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGT +
Preference number: 3 (lower is better)
Translates to: LCFPRLREQPRR*AVRARGGARAR
Trigger: ACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp ACCCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTaGACCGTCACACGCAGGGCCCTGGAGCGGCGCCCA +
Preference number: 3 (lower is better)
Translates to: TRPSPGAIQSRC*TVTRRALERRP
Trigger: TGGGCGCCGCTCCAGGGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGCGCCCGGCGAAGGTCGGGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CACCGTCTAAGCGTGCGGAGCCGCGGGCTGGATCTCTaGCAGGCCAGGGTGCGGGATGGGCGTGGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: HRLSVRSRGLDL*QARVRDGRGRA
Trigger: GGCCCTGCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCACGCTTAGACGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp GGCGCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTaGCGCACCCCACGACGGAGCAGTGAGCGCGAGGAT +
Preference number: 3 (lower is better)
Translates to: GARAALEGAWTL*RTPRRSSERED
Trigger: ATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGCACAGAGTCCACGCACCCTCGAGGGCGGCCCTGGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp GCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCGCGTaGGCGTGTTGGAAACGTCAGACCGCGGCTGGTGGC +
Preference number: 3 (lower is better)
Translates to: AQMSCPCPRGRA*ACWKRQTAAGG
Trigger: GCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTGCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CCCCTGGACCTGGAGCCCGCGCTGCCACCCGGCAGGTaGCTGACTCGCCCCAAACTCCCAGCATGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: PLDLEPALPPGR*LTRPKLPACSG
Trigger: GCCGCTGCATGCTGGGAGTTTGGGGCGAGTCAGGCACCTGCCGGGTGGCAGCGCGGGCTCCAGGTCCAGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp AAGACCGGCAGACCGCCTGGTTTCCAGCGCCCTACCTaGAGGAGGCGGCCCCGGGCCAAGGCCGGGAGGGAG +
Preference number: 3 (lower is better)
Translates to: KTGRPPGFQRPT*RRRPRAKAGRE
Trigger: CTCCCTCCCGGCCTTGGCCCGGGGCCGCCTCCTCCAGGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GCCTGGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTaGGGGCGCCAGGGACCAGTGAAGCCCAAAGCGGCG +
Preference number: 3 (lower is better)
Translates to: AWVRERGRRWLA*GRQGPVKPKAA
Trigger: CGCCGCTTTGGGCTTCACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CCAGAAGCACCGCGGGCAGGGCGGGCCAGGAGCCCGTaGTTGGTCTCCGCACCTAGAGGAAGCCCCGAACCG +
Preference number: 3 (lower is better)
Translates to: PEAPRAGRARSP*LVSAPRGSPEP
Trigger: CGGTTCGGGGCTTCCTCTAGGTGCGGAGACCAAGCACGGGCTCCTGGCCCGCCCTGCCCGCGGTGCTTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp ATCCCGATGAGGGGATGGACCGCGCCATCCCAGGGCTaGGGAGGAGCGGGGAGGGCGGATCTCCCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: IPMRGWTAPSQG*GGAGRADLPGQ
Trigger: CTGGCCAGGGAGATCCGCCCTCCCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATaGACCGCGCCATCCCAGGGCTGGGGAGGAGCGGGG +
Preference number: 3 (lower is better)
Translates to: DGAVSARIPMRG*TAPSQGWGGAG
Trigger: CCCCGCTCCTCCCCAGCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GCGCGCGTGCGCGTGTTGGAAACGTCAGACCGCGGCTaGTGGCTATGCAGGTACGCGGGAGCGGGCGTGGGC +
Preference number: 3 (lower is better)
Translates to: ARVRVLETSDRG*WLCRYAGAGVG
Trigger: GCCCACGCCCGCTCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CCCCACCCCTCACGCCACCACTGCGGCTTGACCGTGTaGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: PHPSRHHCGLTV*QDWARSTAGRA
Trigger: CGCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGCGTGAGGGGTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp GACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTaGAGCTGTTGGAAACCTATTCTCGGAGGCTGCTGG +
Preference number: 3 (lower is better)
Translates to: DAWGARAAAWRA*SCWKPILGGCW
Trigger: CCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CACCCTGATGCCGCGGTGGCGGCTTCCCCACGCGGCTaGCTCCCACTGGACTGCCTCCCATCAGTGACTCCC +
Preference number: 3 (lower is better)
Translates to: HPDAAVAASPRG*LPLDCLPSVTP
Trigger: GGGAGTCACTGATGGGAGGCAGTCCAGTGGGAGGCAGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTaGCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGG +
Preference number: 3 (lower is better)
Translates to: VPLSVGQQGLKR*PHAFVGQQLLG
Trigger: CCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 72 bp CGCGTGCGCGTGTTGGAAACGTCAGACCGCGGCTGGTaGCTATGCAGGTACGCGGGAGCGGGCGTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: RVRVLETSDRGW*LCRYAGAGVGR
Trigger: CCTGCCCACGCCCGCTCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp AGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTTaGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGT +
Preference number: 3 (lower is better)
Translates to: SCPCPRGRACAC*KRQTAAGGYAG
Trigger: ACCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGGCGCGCGTGCGCGTGTaGGAAACGTCAGACCGCGGC +
Preference number: 3 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTARVRV*ETSDRG
Trigger: GCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGC...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp GTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGCAGGTTGTCCAGCTCTaGCTGCCTGACCACCTGCTC +
Preference number: 3 (lower is better)
Translates to: VSTVWGRSREMARPSARRQVVQL*LPDHLL
Trigger: GAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTG...CCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR TCA 72 bp TTCAGGCAGCTCAAGGTGAGTGACCCTGGGCCACCCTaGTGCCGCGGTGGCGGCTTCCCCACGCGGCTGCCT +
Preference number: 3 (lower is better)
Translates to: FRQLKVSDPGPP*CRGGGFPTRLP
Trigger: AGGCAGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGTGGCCCAGGGTCACTCACCTTGAGCTGCCTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GGGATAGGCCTTTTCAGGCGCAGGCCCAGGAGAGCCTaGACGTGCTGCTGCGGCACCCCTCAGGTAGGGCCC +
Preference number: 3 (lower is better)
Translates to: GIGLFRRRPRRA*TCCCGTPQVGP
Trigger: GGGCCCTACCTGAGGGGTGCCGCAGCAGCACGTCCAGGCTCTCCTGGGCCTGCGCCTGAAAAGGCCTATCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTTaGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAG +
Preference number: 3 (lower is better)
Translates to: GARAAAWRACSC*KPILGGCWRLQ
Trigger: CTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp TTGTGGTGCCTTAAGATGCACCACTGTTGGGACGCGTaGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGC +
Preference number: 3 (lower is better)
Translates to: LWCLKMHHCWDA*GARAAAWRACS
Trigger: GCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp TCCCTCCGGATGGCCTGGATGACAGTCAGCACGGTGTaGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCC +
Preference number: 3 (lower is better)
Translates to: SLRMAWMTVSTV*GRSREMARPSA
Trigger: GGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR-3UTR CAA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACCGCCACCACTGCGGCTaGACCGTGTGGCAAGACTGG +
Preference number: 3 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHRHHCG*TVWQDW
Trigger: CCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGCG...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGGGGAAGGCGGTGGCTaGCCTGGGGGCGCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDGEGGG*PGGARD
Trigger: GTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 72 bp GGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGGCCTTTCTGGTCGCGC +
Preference number: 3 (lower is better)
Translates to: GPRGSAASWCST*RRSAAGPFWSR
Trigger: GCGCGACCAGAAAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR GCA 72 bp ACCCTCCCCATCCGCCTACCTCTCACTCGTACGGGCTaGCCTTCCCAGCCGGGTGATCCTGCCCACCCCAGA +
Preference number: 3 (lower is better)
Translates to: TLPIRLPLTRTG*PSQPGDPAHPR
Trigger: TCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGGGAGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp GTGGGGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTaGCACAGGAAGTCCAAGAAAGCGGCGGCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: VGAAAGTGSFML*HRKSKKAAAWR
Trigger: CCTCCAGGCCGCCGCTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 72 bp CGGCCCCGCCGTCAGCAGACTCAAGCAAGGAGAATGTaGAGAAGGGTGCGGGCGGGCCTCGTCCTCTGTGGC +
Preference number: 3 (lower is better)
Translates to: RPRRQQTQARRM*RRVRAGLVLCG
Trigger: GCCACAGAGGACGAGGCCCGCCCGCACCCTTCTCCACATTCTCCTTGCTTGAGTCTGCTGACGGCGGGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTaGCTTCTTCGCACCGCAACCCCTGGACCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: DCRARGTEPDDH*LLRTATPGPGA
Trigger: GGCTCCAGGTCCAGGGGTTGCGGTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTaGCGCGCCTGCAGCTGTTGGAAACCTATTCTCGGA +
Preference number: 3 (lower is better)
Translates to: HCWDAWGARAAA*RACSCWKPILG
Trigger: TCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp ACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTaGGTACGGGAGCGGGGAAGGCGGTGGCTTGCCTGG +
Preference number: 3 (lower is better)
Translates to: TAFSQSFSVRPA*VRERGRRWLAW
Trigger: CCAGGCAAGCCACCGCCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CCCCATCACAGCCACCTGTGGCTAGCAGAGTGGAGGTaGGGTCGAAGGCCATGGTGGCCACGGGGGCCGTGT +
Preference number: 3 (lower is better)
Translates to: PHHSHLWLAEWR*GRRPWWPRGPC
Trigger: ACACGGCCCCCGTGGCCACCATGGCCTTCGACCCCACCTCCACTCTGCTAGCCACAGGTGGCTGTGATGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR CCA 72 bp CGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTaGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAG +
Preference number: 3 (lower is better)
Translates to: RLKSTPSTAWAS*QCRELVFHVTQ
Trigger: CTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR TCA 72 bp CACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTaGGCCAGCAGCAATGCCCGACTGGCTGTCACCAGC +
Preference number: 3 (lower is better)
Translates to: HRRVTLPSCQAH*ASSNARLAVTS
Trigger: GCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR GCA 72 bp GGATGGGCGTGGCAGGGCCGAGACCATCAGCTCCAGTaGCCTTCTGGCTGGCTAGGTAGGGTGTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GWAWQGRDHQLQ*PSGWLGRVLAR
Trigger: CCTGGCCAACACCCTACCTAGCCAGCCAGAAGGGCACTGGAGCTGATGGTCTCGGCCCTGCCACGCCCATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CGCGCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTaGTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGA +
Preference number: 3 (lower is better)
Translates to: RACSCWKPILGG*WRLQSAWHGAR
Trigger: TCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp AATGTGGAGAAGGGTGCGGGCGGGCCTCGTCCTCTGTaGCCCCGCGGTGACTCCAAACACCCACTCCCACCA +
Preference number: 3 (lower is better)
Translates to: NVEKGAGGPRPL*PRGDSKHPLPP
Trigger: TGGTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCACCCTTCTCCACATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp TGGCTAGCAGAGTGGAGGTGGGGTCGAAGGCCATGGTaGCCACGGGGGCCGTGTGTATCGCCTTCCACAGGC +
Preference number: 3 (lower is better)
Translates to: WLAEWRWGRRPW*PRGPCVSPSTG
Trigger: GCCTGTGGAAGGCGATACACACGGCCCCCGTGGCCACCATGGCCTTCGACCCCACCTCCACTCTGCTAGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR-3UTR CAA 90 bp GAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAG +
Preference number: 3 (lower is better)
Translates to: ESAAQCRAAGPQALPARLWQCRE*VFHVTQ
Trigger: CTGCGTCACGTGGAACACCAACTCGCGGCACTGCCA...AAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR TCA 72 bp CTCCTCTGCTCCTGGACCCGAGGGAGCCTCGAGATTTaGGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: LLCSWTRGSLEI*VPARFLRTGWW
Trigger: CCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 72 bp ACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTaGTCCTGCCCACCCCAGAGGAGCAGCCTCTTTCTC +
Preference number: 3 (lower is better)
Translates to: TSHSYGLPFPAG*SCPPQRSSLFL
Trigger: GAGAAAGAGGCTGCTCCTCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CTCCTGGACCCGAGGGAGCCTCGAGATTTGAGTCCCTaGCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: LLDPREPRDLSP*PLLAHRLVAGG
Trigger: TCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp ATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATaGAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACC +
Preference number: 3 (lower is better)
Translates to: MARPSARRYRFS*SRLSSSCCLTT
Trigger: GGTGGTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CCA 72 bp TCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTaGAGAACGAAGACCGGCAGACCGCCTGGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: SLPASCAQAGGW*RTKTGRPPGFQ
Trigger: CTGGAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GAGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTGGCTaGTGGAGAACGAAGACCGGCAGACCGCCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: ESLPASCAQAGG*WRTKTGRPPGF
Trigger: GAAACCAGGCGGTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTaGCACGGAGCCCGACGATCACTGGCTTCTTCGCAC +
Preference number: 3 (lower is better)
Translates to: PILGGCWRLQSA*HGARRSLASSH
Trigger: GTGCGAAGAAGCCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GCCTGCAGCTGTTGGAAACCTATTCTCGGAGGCTGCTaGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGA +
Preference number: 3 (lower is better)
Translates to: ACSCWKPILGGC*RLQSAWHGARR
Trigger: TCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CTGTGGCTAGCAGAGTGGAGGTGGGGTCGAAGGCCATaGTGGCCACGGGGGCCGTGTGTATCGCCTTCCACA +
Preference number: 3 (lower is better)
Translates to: LWLAEWRWGRRP*WPRGPCVSPST
Trigger: TGTGGAAGGCGATACACACGGCCCCCGTGGCCACCATGGCCTTCGACCCCACCTCCACTCTGCTAGCCACAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561907.5
3UTR GCA 72 bp GCTGTTGGAAACCTATTCTCGGAGGCTGCTGGCGACTaGAGAGCGCGTGGCACGGAGCCCGACGATCACTGG +
Preference number: 3 (lower is better)
Translates to: AVGNLFSEAAGD*RARGTEPDDHW
Trigger: CCAGTGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp AGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGGCCTaGTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTC +
Preference number: 3 (lower is better)
Translates to: RPSRRPSRWRRA*CGDLTAFSQSF
Trigger: GAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCGGGAAGGTCTCCTTGAGGGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp AGTACGTTTTTGTGGTGCCTTAAGATGCACCACTGTTaGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGC +
Preference number: 3 (lower is better)
Translates to: STFLWCLKMHHC*DAWGARAAAWR
Trigger: GCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp AGGGACCCCGCCCTCTCAAGGGTGCACAGTGGGCTCTaGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: RDPALSRVHSGL*KTNALVPALRR
Trigger: TCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCACCCTTGAGAGGGCGGGGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTAGGGAGCCTCGAGATTaGAGTCCCTGCCCGCTTCTT +
Preference number: 3 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPREPRD*SPCPLL
Trigger: AAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCT...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGAGCATGCAGCGGCGTTaGGAGCTGGGAGAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: VCLLCALVRRQRHLRAQESMQRR*ELGEVQ
Trigger: CTGGACCTCTCCCAGCTCCAAACGCCGCTGCATGCT...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGTCCCTGCCCGCTTCTaGCGCACAGGCTGGTGGCTG +
Preference number: 3 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIVPARF*RTGWWL
Trigger: CAGCCACCAGCCTGTGCGCAAGAAGCGGGCAGGGAC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp TCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTaGGCAGGAGTTGGGACGAATTCAGGCAGCTCAAGG +
Preference number: 3 (lower is better)
Translates to: SLCAGQTAATPS*AGVGTNSGSSR
Trigger: CCTTGAGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTTTGTCCCCCAGACGTTaGCCTTCTCTGTGCGCTGGT +
Preference number: 3 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLLSPRR*PSLCAG
Trigger: ACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAA...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CGGCGTATCACAGTACGTTTTTGTGGTGCCTTAAGATaGACCACTGTTGGGACGCGTGGGGCGCACGAGCCG +
Preference number: 3 (lower is better)
Translates to: RRITVRFCGALR*TTVGTRGAHEP
Trigger: CGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp CCCAACTTTTTGTCCCCCAGACGTTTGCCTTCTCTGTaGGCTGGTCAGACGGCAGCGACACCTTCGTGCGCA +
Preference number: 3 (lower is better)
Translates to: PNFLSPRRLPSL*AGQTAATPSCA
Trigger: TGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp ACCCAGGGTGGAGTGCAGTGGCGCGATCTTGTTCACTaGAGCCGCGACTGCTTAGGCTCAAGTGATCTCCCA +
Preference number: 3 (lower is better)
Translates to: TQGGVQWRDLVH*SRDCLGSSDLP
Trigger: TGGGAGATCACTTGAGCCTAAGCAGTCGCGGCTGCAGTGAACAAGATCGCGCCACTGCACTCCACCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CCAGAGAGACAGAGCCGGCCAGGAGAGCGGCCTTTATaGGTTTTCCAGGGGTTCAGGATGGACTGGAGAGAG +
Preference number: 3 (lower is better)
Translates to: PERQSRPGERPL*VFQGFRMDWRE
Trigger: CTCTCTCCAGTCCATCCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTCCTGGCCGGCTCTGTCTCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp TGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTaGGACGAATTCAGGCAGCTCAAGGTGAGTGACCCT +
Preference number: 3 (lower is better)
Translates to: WSDGSDTFVRRS*DEFRQLKVSDP
Trigger: AGGGTCACTCACCTTGAGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp CTTTTTGTCCCCCAGACGTTTGCCTTCTCTGTGCGCTaGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGT +
Preference number: 3 (lower is better)
Translates to: LFVPQTFAFSVR*SDGSDTFVRRS
Trigger: ACTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR TCA 72 bp CCATTTGCTGTTCCTCTGAGTAAAGCTTGTTCTGCATaGCCCCCACCGTCTAAGCGTGCGGAGCCGCGGGCT +
Preference number: 3 (lower is better)
Translates to: PFAVPLSKACSA*PPPSKRAEPRA
Trigger: AGCCCGCGGCTCCGCACGCTTAGACGGTGGGGGTCATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp AGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTaGACGCCTCCAGGGCTGGAAAGCTCATTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: SSPAYPSPLLQS*TPPGLESSFFF
Trigger: GAAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR-3UTR CAA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATACTTCGTGCGCAGGAGTaGGGACGAATTCAGGCAGCT +
Preference number: 3 (lower is better)
Translates to: GEPVRSAPPPACIEQLTILRAQE*GRIQAA
Trigger: AGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAG...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp AGACAGGGAGAAGGTGACAGCTGGCTGGGGGAACCCTaGAAATCAGCCCTATGTGAGCAGGTGTTCATTGCC +
Preference number: 3 (lower is better)
Translates to: RQGEGDSWLGEP*KSALCEQVFIA
Trigger: GGCAATGAACACCTGCTCACATAGGGCTGATTTGCAGGGTTCCCCCAGCCAGCTGTCACCTTCTCCCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR GCA 72 bp AAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTGGTaGCTTAAGATGCACCACTGTTGGGACGCGTGGGGC +
Preference number: 3 (lower is better)
Translates to: KPKAAYHSTFLW*LKMHHCWDAWG
Trigger: GCCCCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp GTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTTGTaGTGCCTTAAGATGCACCACTGTTGGGACGCGTGG +
Preference number: 3 (lower is better)
Translates to: VKPKAAYHSTFL*CLKMHHCWDAW
Trigger: CCACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CCA 72 bp TTTGTAGGGGCAAGTGAGGAGCATACAGATGGAGGGTaGGGTGTACTATTCAGGCAAGAAAAGAGGGTAGGG +
Preference number: 3 (lower is better)
Translates to: FVGASEEHTDGG*GVLFRQEKRVG
Trigger: CCCTACCCTCTTTTCTTGCCTGAATAGTACACCCCACCCTCCATCTGTATGCTCCTCACTTGCCCCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGGTCGGCGGTGGCGGTaGGGACCACGCCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLGRRWR*GPRRRC
Trigger: ACACCGCCGGCGTGGTCCTCACCGCCACCGCCGACC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGGCCGTGCGGTCCTGTaGGCCTGTGGCCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALGRAVL*ACGQQL
Trigger: AAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCACGCCGGCGGTGTGTaGCAGGGTGCAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALHAGGV*QGAVGQ
Trigger: CTGACCCACTGCACCCTGGCACACACCGCCGGCGTG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGGTCGTCCAGCCGGCTaGAGTGCAGCCCCCAGACCT +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALGRPAG*SAAPRP
Trigger: AGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGAAGCTCCCAGCCCCTaGCATCCGGGTGAGGGACCC +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALEAPSP*HPGEGP
Trigger: GGGTCCCTCACCCGGATGGCAGGGGCTGGGAGCTTC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCCTGGAGGGTCCTGCTaGGCCGCTGAAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALPGGSC*AAESAA
Trigger: AGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCGGTCTCTGCCATGTTaGCGCCGCCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGRSLPC*RRRRSS
Trigger: GCTGGAGCGGCGGCGGCGGCAACATGGCAGAGACCG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCCGCCGCCGCTCCAGCTaGAACCTGCTAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: GLKRCPHAFVGQQLLGGLRRRSS*NLLGSR
Trigger: CCGGGACCCTAGCAGGTTTCAGCTGGAGCGGCGGCG...GAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCACCCGGCAGGTGCCTaGCTCGCCCCAAACTCCCAG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGHPAGA*LAPNSQ
Trigger: CTGGGAGTTTGGGGCGAGTCAGGCACCTGCCGGGTG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCGCGGGCTGGATCTCTaGCAGGCCAGGGTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGRGLDL*QARVRD
Trigger: ATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCGTGTAGGGTCCGGGTaGAAGGCCACTAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALRVGSG*KATRCT
Trigger: CGTGCACCTAGTGGCCTTCCACCCGGACCCTACACG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGAGGCCACGACAACGTaGGAGTCCTCGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALEATTT*ESSGPR
Trigger: TCTTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGCCGCAGTCGGAGCATaGTGGCTTCCAGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALAAVGA*WLPASR
Trigger: GCGAGAAGCTGGAAGCCACCATGCTCCGACTGCGGC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCGATGGTGCCATCAGCTaGGGCCGTGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGDGAIS*GRGQHL
Trigger: CAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATC...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGCCTCTTTCTCGCGCTaGGGGCCGCCTCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLASFSR*GPPLHP
Trigger: TGGATGGAGAGGCGGCCCGCAGCGCGAGAAAGAGGC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCGGAGGCTGGCGGTCTTaGCGGGGTGGCGCCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGGGWRS*RGGAPS
Trigger: ACTGGGGGCGCCACCCCGGCAAGACCGCCAGCCTCC...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGTGGAGGCGGGCCTGCTaGGGAGATCTGACCGCGTTC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLWRRAC*GDLTAF
Trigger: GAACGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCA...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGGTCGTCCAGCCGGCGTaGAGCCCCCAGACCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VSTVWGRSREMARPSARRVVQPA*SPQTLS
Trigger: GGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGAC...CCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGATCCCGATGAGGGGATaGACCGCGCCATCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLIPMRG*TAPSQG
Trigger: GCCCTGGGATGGCGCGGTCCATCCCCTCATCGGGAT...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCAAGCAAGGAGAATGTaGAGAAGGGTGCGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALQARRM*RRVRAG
Trigger: GCCCGCCCGCACCCTTCTCCACATTCTCCTTGCTTG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCACCGTGTGGCAAGACTaGGCCAGAAGCACCGCGGGC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGTVWQD*ARSTAG
Trigger: GCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGT...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCAAGATGCACCACTGTTaGGACGCGTGGGGCGCACGA +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALKMHHC*DAWGAR
Trigger: TCGTGCGCCCCACGCGTCCCAACAGTGGTGCATCTT...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCACCCTGATGCCGCGGTaGCGGCTTCCCCACGCGGCT +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHATLMPR*RLPHAA
Trigger: AGCCGCGTGGGGAAGCCGCCACCGCGGCATCAGGGT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGCCAGGGCAGCTTCCTaGAGGGATGCCTTAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALARAAS*RDALEA
Trigger: AGCCTCTAAGGCATCCCTCCAGGAAGCTGCCCTGGC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCGCCCCAGTGAGGGCGTaGTCGTCCAGCCGGCGTGCA +
Preference number: 4 (lower is better)
Translates to: VGPIQGDGQAQRPQVPLLAPVRA*SSSRRA
Trigger: TGCACGCCGGCTGGACGACCACGCCCTCACTGGGGC...GAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615855.4
3UTR CAA 72 bp GAGCTGTCCGTGCCCGCGGGGGCGCGCGTGCGCGTGTaGGAAACGTCAGACCGCGGCTGGTGGCTATGCAGG +
Preference number: 4 (lower is better)
Translates to: ELSVPAGARVRV*ETSDRGWWLCR
Trigger: CCTGCATAGCCACCAGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGGGCACGGACAGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCGGTCGGCGGTGGCGGTaGGGACCACGCCGGCGGTGT +
Preference number: 4 (lower is better)
Translates to: EMARPSARRYRFSCSRLSGRRWR*GPRRRC
Trigger: ACACCGCCGGCGTGGTCCTCACCGCCACCGCCGACC...GGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCTCCGGATGGCCTGGATaGCAGTCAGCACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGSGWPG*QSARCG
Trigger: CCCACACCGTGCTGACTGTCATCCAGGCCATCCGGA...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCGAAACCATGCAGGGCTaGTGGGGTGTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGETMQG*WGVGQE
Trigger: CTCCTGCCCCACACCCCATCAGCCCTGCATGGTTTC...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCAGGCCACCCGGTGGCCTaGGAAGACACCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LGGLSPQEHTQHGLGLVAGHPVA*EDTQQL
Trigger: CAGCTGCTGGGTGTCTTCTCAGGCCACCGGGTGGCC...TGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCCCCGGCGGCTGGGCCTaGGTGTACACACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: VGPIQGDGQAQRPQVPLLPGGWA*VYTHCP
Trigger: TGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCGGG...GAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGGCCTGCTCCTCTGCCTaGTCCGCCTCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: VSTVWGRSREMARPSARRACSSA*SASVTS
Trigger: GGATGTGACCGAGGCGGAGCAGGCAGAGGAGCAGGC...CCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCAGGTTGTCCAGCTCTTaGTGCCTGACCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALRLSSS*CLTTCS
Trigger: GGAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCT...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGCAGGGCCTCAAGCGCTaGCCGCACGCCTTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: LLGGLSPQEHTQHGLGLVQGLKR*PHAFVG
Trigger: GCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTG...CACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCGGCCGCCCTCGAGGGTaGGTGGACTCTGTGCCGCAC +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTGRPRG*VDSVPH
Trigger: GTGCGGCACAGAGTCCACGCACCCTCGAGGGCGGCC...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCGCCTGGACGTGCTGCTaGGGCACCCCTCAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSAWTCC*GTPQVG
Trigger: CCCTACCTGAGGGGTGCCGCAGCAGCACGTCCAGGC...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCTCACTCGTACGGGCTaGCCTTCCCAGCCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLLTRTG*PSQPGD
Trigger: ATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAG...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCCTATTCTCGGAGGCTaGTGGCGACTGCAGAGCGCG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGPILGG*WRLQSA
Trigger: CGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAATAGG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCTTAGGCAGGGGCTATTaGAGGCCACGACAACGTGGG +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALLGRGY*RPRQRG
Trigger: CCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAA...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGCCGTGGCCAGCACCTaGTCCATGGGAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLAVAST*SMGENW
Trigger: CCAGTTCTCTCCCATGGACCAGGTGCTGGCCACGGC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCTGCAGGGGAACCCCTaGGGTGAGCCTGTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLLQGNP*GEPVRS
Trigger: AGACCTCACAGGCTCACCCCAGGGGTTCCCCTGCAG...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp CCCAGCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSTAWASWQCRE*VFHVTQKRSRA
Trigger: GGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGSWCST*RRSAAG
Trigger: CCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACT...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTCTGTGGCCCCGCGGTaGCTCCAAACACCCACTCCC +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPSVAPR*LQTPTP
Trigger: GGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTGCCACCACTGCGGCTTaGCCGTGTGGCAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPATTAA*PCGKTG
Trigger: CCCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGC...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCCCCGGCGGCTGGGCCTaGGTGTACACACACTGCCCA +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTPGGWA*VYTHCP
Trigger: TGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCGGG...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCAGTGGGTCAGCTCCTaGCCAGGGCCCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: ESAAQCRAAGPQALPARLQWVSS*PGPGGW
Trigger: CCAGCCGCCGGGCCCTGGGCAGGAGCTGACCCACTG...AAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCGGTGTGTGCCAGGGTaGAGTGGGTCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSRCVPG*SGSAPA
Trigger: GGCAGGAGCTGACCCACTGCACCCTGGCACACACCG...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCCGGTGTGTGCCAGGGTaGAGTGGGTCAGCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PQALPARLRRPAAPRGPLRCVPG*SGSAPA
Trigger: GGCAGGAGCTGACCCACTGCACCCTGGCACACACCG...GAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCACGGTCTCTGCCATGTTaGCGCCGCCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLRRPAAPRGPLASRAHPRSLPC*RRRRSS
Trigger: GCTGGAGCGGCGGCGGCGGCAACATGGCAGAGACCG...TGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGTCCGGCCGCGGTCTCTaGCATGTTGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: DGQAQRPQVPLLMQQVVQSGRGL*HVAAAA
Trigger: GGCGGCGGCGGCAACATGGCAGAGACCGCGGCCGGA...CTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCGGTGCGTGGACTCTGTaGCGCACCCCACGACGGAGC +
Preference number: 4 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGGAWTL*RTPRRS
Trigger: GCTCCGTCGTGGGGTGCGGCACAGAGTCCACGCACC...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCCGGGCCAGGAGCCCGTaGTTGGTCTCCGCACCTAGA +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHARARSP*LVSAPR
Trigger: TCTAGGTGCGGAGACCAAGCACGGGCTCCTGGCCCG...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCAATCCCTGTGCTCCTaGCCCCAGATCGTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGQSLCS*PQIVGL
Trigger: CAAGCCCACGATCTGGGGGCAGGAGCACAGGGATTG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCTCCTCCCAGCAGCTCTaGCTGGAAGTCCCCCAATCC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGSSQQL*LEVPQS
Trigger: GGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGA...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACGAGCTGAGCATGGTGTaGCCGTCGGCGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHELSMV*PSALKA
Trigger: GGCCTTCAGCGCCGACGGCCACACCATGCTCAGCTC...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCCGCAGTCGGAGCATaGTGGCTTCCAGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: ARCGADPGRWPGPAPAGTAAVGA*WLPASR
Trigger: GCGAGAAGCTGGAAGCCACCATGCTCCGACTGCGGC...GGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGTGCCCTTCTGGCTaGCTAGGTAGGGTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLQCPSG*LGRVLA
Trigger: GGCCAACACCCTACCTAGCCAGCCAGAAGGGCACTG...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGACGCGGGAGCGGGCGTaGGCAGGGCAGGCTAGCCGA +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELTRERA*AGQASR
Trigger: TCGGCTAGCCTGCCCTGCCCACGCCCGCTCCCGCGT...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACGACCGGCAGACCGCCTaGTTTCCAGCGCCCTACCTG +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHDRQTA*FPAPYL
Trigger: CAGGTAGGGCGCTGGAAACCAGGCGGTCTGCCGGTC...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGGCACGAGCCGCGGCCTaGCGCGCCTGCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELARAAA*RACSCW
Trigger: CCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGC...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGGAGCGGGGAAGGCGGTaGCTTGCCTGGGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELERGRR*LAWGRQ
Trigger: CTGGCGCCCCCAGGCAAGCCACCGCCTTCCCCGCTC...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCTGCAAGGGGCAGCCCTaGTGCAGATCAAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGCKGQP*CRSRGS
Trigger: GGAGCCTCTTGATCTGCACCAGGGCTGCCCCTTGCA...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CAGCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAGGCCGTGCGGTCCTGTaGGCCTGTGGCCAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QHGLGLVAVPRVGVPRDAGRAVL*ACGQQL
Trigger: AAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCC...TGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLKRCPHAFVGQQLLGGLSWCST*RRSAAG
Trigger: CCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACT...GAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGTGCGTGTACACACACTaGCCAGAAGCTGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLCVYTH*PEAASH
Trigger: GTGGGAGGCAGCTTCTGGGCAGTGTGTGTACACGCA...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCCAGAGCTTGGCCGTaGGGTCCTGTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRPRAWP*GPVSLW
Trigger: CCACAGGCTCACAGGACCGCACGGCCAAGCTCTGGG...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp TATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTGAGCCAGTCCGGCCGCGGTCTCTaGCATGTTGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: YRLPQAGNAALLPGPLSQSGRGL*HVAAAA
Trigger: GGCGGCGGCGGCAACATGGCAGAGACCGCGGCCGGA...CTGGCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGGGTCGAAGGCCATGGTaGCCACGGGGGCCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRGRRPW*PRGPCV
Trigger: TACACACGGCCCCCGTGGCCACCATGGCCTTCGACC...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp ATGGTGGCCACGGGGGCCGTGTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTGGGGTCGAAGGCCATaGTGGCCACGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: MVATGAVCIAFHRRVTLPWGRRP*WPRGPC
Trigger: ACACGGCCCCCGTGGCCACCATGGCCTTCGACCCCA...GGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCCCCCGTGGCCACCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCGGATGGCGGCATCCGTaGCCGAGGAGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAGWRHP*PRRRAA
Trigger: TGCTGCTCTTCTCCTCGGCCACGGATGCCGCCATCC...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGGTGACCACACGCGGATaGCGGCATCCGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SVGQQGLKRCPHAFVGQQVTTRG*RHPWPR
Trigger: CCTCGGCCACGGATGCCGCCATCCGCGTGTGGTCAC...CTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCGATCCTTGGCACAGCTaGCAAAGAGCCACCCCTTCC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGDPWHS*QRATPS
Trigger: GGAAGGGGTGGCTCTTTGCCAGCTGTGCCAAGGATC...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCCATCAGCTGAGGCCGTaGCCAGCACCTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAHQLRP*PAPGPW
Trigger: CCATGGACCAGGTGCTGGCCACGGCCTCAGCTGATG...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCAGACAGCTGAAGTCCTaGAGTGCCCAGAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALRQLKS*SAQSLM
Trigger: CATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCT...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTCAGACCGCGGCTGGTaGCTATGCAGGTACGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPSDRGW*LCRYAG
Trigger: TCCCGCGTACCTGCATAGCCACCAGCCGCGGTCTGA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACACGTCAGACCGCGGCTaGTGGCTATGCAGGTACGCG +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHTSDRG*WLCRYA
Trigger: CGCGTACCTGCATAGCCACCAGCCGCGGTCTGACGT...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACTTGCTCCTCTGCTCCTaGACCCGAGGGAGCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHLLLCS*TRGSLE
Trigger: CTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGCAA...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCCGACTGCAGAGCGCGTaGCACGGAGCCCGACGATCA +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTRLQSA*HGARRS
Trigger: TGATCGTCGGGCTCCGTGCCACGCGCTCTGCAGTCG...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGGAAGACCAATGCCCTaGTTCCCGCCCTCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLGRPMP*FPPSED
Trigger: GTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCTGGAAGCCACAGCCATaGCAGGCCCCCGATACCCAG +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAWKPQP*QAPDTQ
Trigger: CTGGGTATCGGGGGCCTGCCATGGCTGTGGCTTCCA...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCCCAGATCGTGGGCTTaGGGGACAGCAAGAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLPRSWA*GTARKL
Trigger: CAGCTTTCTTGCTGTCCCCCAAGCCCACGATCTGGG...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCAAGCAGCCAGAGAGGTaGGGCACCTGGGCGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTKQPER*GTWASL
Trigger: GAGGCTCGCCCAGGTGCCCCACCTCTCTGGCTGCTT...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp GGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGTaGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCA +
Preference number: 4 (lower is better)
Translates to: GRTSRGLARLQL*ETYSRRLLATA
Trigger: TGCAGTCGCCAGCAGCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGCCAGGCCGCGGCTCGTGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACGGCGCTGAAGGCCAGTaGGGTGACGGCGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHGAEGQ*GDGAVV
Trigger: CACTACAGCGCCGTCACCTCACTGGCCTTCAGCGCC...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCTTATCATGGCAGCGCTaGGTGGTCTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGPIQGDGQAQRPQVPLLLSWQR*VVWACR
Trigger: CCTGCAGGCCCAGACCACTCAGCGCTGCCATGATAA...GAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCGGAGTGCCCAGAGCTTaGTGGTGCCATCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSGVPRA*WCHQLR
Trigger: CCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCC...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTACCTGGAGGGTCCTGCTaGGCCGCTGAAAGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVPGGSC*AAESAA
Trigger: AGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGG...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp CCAGGCCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTCGCCGCCGCTCCAGCTaGAACCTGCTAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PGPLSQQQCPTGCHQHLVRRRSS*NLLGSR
Trigger: CCGGGACCCTAGCAGGTTTCAGCTGGAGCGGCGGCG...AACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCCACTTCCAGAATGTTaGCTCTGGTGCCACAGACGC +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGPLPEC*LWCHRR
Trigger: GCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGGCCCGGGGCTTCCCTaGACCCTCCCAGGCCACCGC +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLGPGLP*TLPGHR
Trigger: GCGGTGGCCTGGGAGGGTTCAGGGAAGCCCCGGGCC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCCCACCAAATGCCAGTaGCTGCACAGATGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPPTKCQ*LHRWAL
Trigger: GAGGGCCCATCTGTGCAGTCACTGGCATTTGGTGGG...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCAACACTGCCCAGAAGCTaGCTCCCACACGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGGLSPQEHTQHGLGLVATLPRS*LPHAQS
Trigger: ACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAGTGT...TGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCACGCCGGCGGTGTGTaGCAGGGTGCAGTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEGPAEPLKVPLSVGQQGHAGGV*QGAVGQ
Trigger: CTGACCCACTGCACCCTGGCACACACCGCCGGCGTG...GCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTGAAGTCCTGGAGTaGCCAGAGCTTGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: ARCGADPGRWPGPAPAGTAEVLE*PELDGA
Trigger: GGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGC...GGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTGAGCCGGTCTCTGCCATGTTaGCGCCGCCGCCGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VYRLPQAGNAALLPGPLSRSLPC*RRRRSS
Trigger: GCTGGAGCGGCGGCGGCGGCAACATGGCAGAGACCG...GCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR GCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCGCTCAGAGCCTGCGCTaGCTGCAGCCCTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTAQSLR*LQPFCT
Trigger: GGTACAGAAGGGCTGCAGGCAGCGCAGGCTCTGAGC...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTGCTCTGGAAGACCAATaGCCTGGTTCCCGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPALEDQ*PGSRPQ
Trigger: CTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAGC...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACACCTGGGCGAGCCTCTaGCCAGGCCATGTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHTWASL*PGHVCS
Trigger: ACTGCAAACATGGCCTGGGCAGAGGCTCGCCCAGGT...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGAGCTGAGCATGGTGTaGCCGTCGGCGCTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVELSMV*PSALKA
Trigger: GGCCTTCAGCGCCGACGGCCACACCATGCTCAGCTC...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCCAGGGCCCGGCGGCTaGGCCTGCGTGTACACACAC +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADPGPGG*ACVYTH
Trigger: GTGTGTGTACACGCAGGCCCAGCCGCCGGGCCCTGG...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GAAGTCCAAGAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCCAGGGCCCGGCGGCTaGGCCTGCGTGTACACACAC +
Preference number: 4 (lower is better)
Translates to: EVQESGGLEGPAEPLKVPPGPGG*ACVYTH
Trigger: GTGTGTGTACACGCAGGCCCAGCCGCCGGGCCCTGG...CGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTCTTGGACTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTGCAGGGCCCAGAGCTTaGCCGTGCGGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ARPSARRYRFSCSRLSSSAGPRA*PCGPVS
Trigger: GCTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGC...AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCATCCGAACCGCTaGACAGCAGCTGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVGHPNR*TAAACH
Trigger: GTGGCACGCAGCTGCTGTCCAGCGGTTCGGATGGCC...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPQTLSS*ASSVRT
Trigger: TGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTG...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCACAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACA +
Preference number: 4 (lower is better)
Translates to: LGGLSPQEHTQHGLGLVAQTLSS*ASSVRT
Trigger: TGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTG...TGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGATCCAGGGAGATaGCCAGGCCCAGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PRVGVPRDAEAQQGLSGRADPGR*PGPAPA
Trigger: TGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGC...GCGACCAGAAAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAAAGAAAGCGGCGGCCTaGAGGGTCCTGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVKKAAA*RVLLSR
Trigger: GCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTCTT...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGCCACGCACATCACCTaGCCAGCCTTGTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLATHIT*PALFIL
Trigger: GAGAATGAACAAGGCTGGCCAGGTGATGTGCGTGGC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGATCCCAACACAGAACTaGTGGCCCCAGCACGAGGAA +
Preference number: 4 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLIPTQN*WPQHEE
Trigger: TTCCTCGTGCTGGGGCCACCAGTTCTGTGTTGGGAT...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCATGAGAGAGAGTGCTaGTGGGACAGACACACAAAG +
Preference number: 4 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALHEREC*WDRHTK
Trigger: CTTTGTGTGTCTGTCCCACCAGCACTCTCTCTCATG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCTTATCATGGCAGCGCTaGGTGGTCTGGGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTLSWQR*VVWACR
Trigger: CCTGCAGGCCCAGACCACTCAGCGCTGCCATGATAA...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCGATGGTGCCATCAGCTaGGGCCGTGGCCAGCACCTG +
Preference number: 4 (lower is better)
Translates to: LEGPAEPLKVPLSVGQQGDGAIS*GRGQHL
Trigger: CAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATC...GCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGGGAGTGCCCAGAGCTTaGTGGTGCCATCAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRGVPRA*WCHQLR
Trigger: CCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCC...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp CAGCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCACAGCATAGTTGGTCTTaGAGCGGCCCACTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: QHGLGLVAVPRVGVPRDAQHSWS*SGPLRP
Trigger: CGGCCGGAGTGGGCCGCTTCAAGACCAACTATGCTG...TGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACGCGCGAGGATCCCGATaGGGGGATGGACCGCGCCAT +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADARGSR*GDGPRH
Trigger: ATGGCGCGGTCCATCCCCTCATCGGGATCCTCGCGC...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGAGCAGCCGCGCAGATaGGCTGTCCGTGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQEEQPRR*AVRARG
Trigger: CCCGCGGGCACGGACAGCTCATCTGCGCGGCTGCTC...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGGACCCTGGGCCACCCTaGTGCCGCGGTGGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLDPGPP*CRGGGF
Trigger: GAAGCCGCCACCGCGGCATCAGGGTGGCCCAGGGTC...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCAGACCAGGGACAGCTTaGGGGCATGAGAGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHARPGTA*GHEREC
Trigger: GCACTCTCTCTCATGCCCTCAAGCTGTCCCTGGTCT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGCCCAGCGAACTGTTTCTaGAGCCGCAGGGAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SAAGPFWSRRSRSMVASSPANCF*SRRERA
Trigger: GGCTCGCTCCCTGCGGCTGCAGAAACAGTTCGCTGG...GCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACGCTGAAGTCCTGGAGTaGCCAGAGCTTGATGGTGCC +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHAEVLE*PELDGA
Trigger: GGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGC...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGTGGGCCTCGTGGCAGTaGCGCGAGTTGGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GGLEGPAEPLKVPLSVGQWASWQ*RELVFH
Trigger: GTGGAACACCAACTCGCGGCACTGCCACGAGGCCCA...CTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGTCCGGCCGCGGTCTCTaGCATGTTGCCGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLSGRGL*HVAAAA
Trigger: GGCGGCGGCGGCAACATGGCAGAGACCGCGGCCGGA...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGATCCAGAGCCGCTGCTaGACCGTCACACGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTIQSRC*TVTRRA
Trigger: GGCCCTGCGTGTGACGGTGCAGCAGCGGCTCTGGAT...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGCCTACTCCCCGCGGTaGTGCTGCGGCCGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLAYSPR*CCGRKG
Trigger: GCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGCGCGGCTGGTGGCTATaGAGGTACGCGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWRGWWL*RYAGAG
Trigger: GCCCGCTCCCGCGTACCTGCATAGCCACCAGCCGCG...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGGGAAGGCGGTGGCTTaGCTGGGGGCGCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQEGKAVA*LGAPGT
Trigger: GGTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCC...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGCCGTGTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCAGGTCGAAGGCCATGGTaGCCACGGGGGCCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: GRVYRLPQAGNAALLPGPGRRPW*PRGPCV
Trigger: TACACACGGCCCCCGTGGCCACCATGGCCTTCGACC...TGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGGTCGAAGGCCATGGTaGCCACGGGGGCCGTGTGTA +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPGRRPW*PRGPCV
Trigger: TACACACGGCCCCCGTGGCCACCATGGCCTTCGACC...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCCTAGCAGAGTGGAGGTaGGGTCGAAGGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTLAEWR*GRRPWW
Trigger: CCACCATGGCCTTCGACCCCACCTCCACTCTGCTAG...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCACGTGTAGGGTCCGGGTaGAAGGCCACTAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: RLRRPAAPRGPLASRAHPRVGSG*KATRCT
Trigger: CGTGCACCTAGTGGCCTTCCACCCGGACCCTACACG...TGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCATATCCGTGTGGCCGTaGAGGATCTGGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAISVWP*RIWQAD
Trigger: GTCAGCCTGCCAGATCCTCCACGGCCACACGGATAT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCGGACGCTCTGATCCTTaGCACAGCTGGCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHAGRSDP*HSWQRA
Trigger: GGCTCTTTGCCAGCTGTGCCAAGGATCAGAGCGTCC...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCACAGTCAGCACGGTGTaGGGCCGATCCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTTVSTV*GRSREM
Trigger: CATCTCCCTGGATCGGCCCCACACCGTGCTGACTGT...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCAGTGATGTCCTCCTaGTCCTCCTGCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PQALPARLRRPAAPRGPLAVMSS*SSCSRL
Trigger: GAGTCTGGAGCAGGAGGACCAGGAGGACATCACTGC...GAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGCGCGCGTGCGCGTGTTaGAAACGTCAGACCGCGGCT +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELRACAC*KRQTAA
Trigger: AGCCGCGGTCTGACGTTTCCAACACGCGCACGCGCG...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGAGGCGGTGGCTTGCCTaGGGGCGCCAGGGACCAGTG +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQERRWLA*GRQGPV
Trigger: CACTGGTCCCTGGCGCCCCCAGGCAAGCCACCGCCT...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCGGCGCTGAAGGCCAGTaGGGTGACGGCGCTGTAGTG +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCGAEGQ*GDGAVV
Trigger: CACTACAGCGCCGTCACCTCACTGGCCTTCAGCGCC...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCGCCACGCCGGTGGCCTaGGAAGACACCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGATPVA*EDTQQL
Trigger: CAGCTGCTGGGTGTCTTCTCAGGCCACCGGCGTGGC...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp ATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGTCCGGATGGCCTGGATaGCAGTCAGCACGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: IQGDGQAQRPQVPLLMQQSGWPG*QSARCG
Trigger: CCCACACCGTGCTGACTGTCATCCAGGCCATCCGGA...CTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp CCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGGCAGCCACCGCCGCGTaGGGGAGGTTAGCACCGAAC +
Preference number: 4 (lower is better)
Translates to: PTEPAAMPDWLSPAPRCQAATAA*GRLAPN
Trigger: GTTCGGTGCTAACCTCCCTCACGCGGCGGTGGCTGC...CTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR TCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGCGCCGCCGCTCCAGCTaGAACCTGCTAGGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLRRRSS*NLLGSR
Trigger: CCGGGACCCTAGCAGGTTTCAGCTGGAGCGGCGGCG...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CACGGGGGCCGTGTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCACAGCATAGTTGGTCTTaGAGCGGCCCACTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: HGGRVYRLPQAGNAALLPQHSWS*SGPLRP
Trigger: CGGCCGGAGTGGGCCGCTTCAAGACCAACTATGCTG...TGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCCCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR TCA 90 bp GGCCGTGTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCATCTTGCCAGGCCCACTaGGCCAGCAGCAATGCCCGA +
Preference number: 4 (lower is better)
Translates to: GRVYRLPQAGNAALLPGPSCQAH*ASSNAR
Trigger: TCGGGCATTGCTGCTGGCTCAGTGGGCCTGGCAAGA...TGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR TCA 90 bp GAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTTCTTGCCAGGCCCACTaGGCCAGCAGCAATGCCCGA +
Preference number: 4 (lower is better)
Translates to: ESAAQCRAAGPQALPARLSCQAH*ASSNAR
Trigger: TCGGGCATTGCTGCTGGCTCAGTGGGCCTGGCAAGA...AAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCCCTTCCCAGCCGGGTaGTCCTGCCCACCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLPFPAG*SCPPQR
Trigger: CCTCTGGGGTGGGCAGGATCACCCGGCTGGGAAGGG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGGCAGCTCAAGGTGAGTaGCCCTGGGCCACCCTGATG +
Preference number: 4 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTAAQGE*PWATLM
Trigger: CATCAGGGTGGCCCAGGGTCACTCACCTTGAGCTGC...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCCAGTGGGTCAGCTCCTaGCCAGGGCCCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPQWVSS*PGPGGW
Trigger: CCAGCCGCCGGGCCCTGGGCAGGAGCTGACCCACTG...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCCGCTGGACAGCAGCTaGGTGCCACGGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: DGQAQRPQVPLLMQQVVQPLDSS*VPRLTK
Trigger: CTTTGTGAGCCGTGGCACGCAGCTGCTGTCCAGCGG...CTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACGCCTGCTCCTCTGCCTaGTCCGCCTCGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADACSSA*SASVTS
Trigger: GGATGTGACCGAGGCGGAGCAGGCAGAGGAGCAGGC...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGTGCTGCCTGACCACCTaGTCCTCTTGCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTCCLTT*SSCLAC
Trigger: GCAGGCCAGGCAAGAGGAGCAGGTGGTCAGGCAGCA...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp ATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGTGCTGCCTGACCACCTaGTCCTCTTGCCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: IQGDGQAQRPQVPLLMQQCCLTT*SSCLAC
Trigger: GCAGGCCAGGCAAGAGGAGCAGGTGGTCAGGCAGCA...CTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTGGGCCTCGTGGCAGTaGCGCGAGTTGGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELWASWQ*RELVFH
Trigger: GTGGAACACCAACTCGCGGCACTGCCACGAGGCCCA...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCAGGGCCTCAAGCGCTaGCCGCACGCCTTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEQGLKR*PHAFVG
Trigger: GCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCGCTTCCCCACGCGGCTaGCTCCCACTGGACTGCCTC +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGASPRG*LPLDCL
Trigger: GAGGCAGTCCAGTGGGAGGCAGCCGCGTGGGGAAGC...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TCAGGGTCCCTCCGGATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCGGATGGCGGCATCCGTaGCCGAGGAGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SGSLRMAWMTVSTVWGRSGWRHP*PRRRAA
Trigger: TGCTGCTCTTCTCCTCGGCCACGGATGCCGCCATCC...GGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGACCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp TCAGGGTCCCTCCGGATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCGAGGCCACGACAACGTaGGAGTCCTCGGGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: SGSLRMAWMTVSTVWGRSEATTT*ESSGPR
Trigger: TCTTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTC...GGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGACCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGGATCCTTGGCACAGCTaGCAAAGAGCCACCCCTTCC +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRDPWHS*QRATPS
Trigger: GGAAGGGGTGGCTCTTTGCCAGCTGTGCCAAGGATC...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGGGACGCTCTGATCCTTaGCACAGCTGGCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRGRSDP*HSWQRA
Trigger: GGCTCTTTGCCAGCTGTGCCAAGGATCAGAGCGTCC...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTGCCGTGGCCAGCACCTaGTCCATGGGAGAGAACTGG +
Preference number: 4 (lower is better)
Translates to: ESAAQCRAAGPQALPARLAVAST*SMGENW
Trigger: CCAGTTCTCTCCCATGGACCAGGTGCTGGCCACGGC...AAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCACTTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGCCCCAGTGAGGGCGTaGTCGTCCAGCCGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLAPVRA*SSSRLQ
Trigger: CTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGCTCCCTCCGGATGGCCTaGATGACAGTCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SAAGPFWSRRSRSMVASSSLRMA*MTVSTV
Trigger: CACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGA...GCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp ATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGGCAGTGCGCCTTTATaGGTTTCCCAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: IQGDGQAQRPQVPLLMQQGSAPL*VSQGVG
Trigger: CCCCACCCCCTGGGAAACCCATAAAGGCGCACTGCC...CTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCCACGCACATCACCTaGCCAGCCTTGTTCATTCTC +
Preference number: 4 (lower is better)
Translates to: PQALPARLRRPAAPRGPLATHIT*PALFIL
Trigger: GAGAATGAACAAGGCTGGCCAGGTGATGTGCGTGGC...GAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGAGGTGCTGGCCAGTCTaGTCCAGCTGTGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: AAQCRAAGPQALPARLRRRCWPV*SSCAFP
Trigger: CGGAAAAGCACAGCTGGACCAGACTGGCCAGCACCT...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp AGGGCCCCAGGCAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTTGCACGGGGTTCAGGATGGACTaGAGAGAGGCCGGACCGGCT +
Preference number: 4 (lower is better)
Translates to: RAPGSSPAYPSPLLQSCTGFRMD*REAGPA
Trigger: AGCCGGTCCGGCCTCTCTCCAGTCCATCCTGAACCC...CGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTGCCTGGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGGTGCGGGATGGGCGTaGCAGGGCCGAGACCATCAG +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEGAGWA*QGRDHQ
Trigger: CTGATGGTCTCGGCCCTGCCACGCCCATCCCGCACC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACAGGCCAGGGTGCGGGATaGGCGTGGCAGGGCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTGQGAG*AWQGRD
Trigger: GTCTCGGCCCTGCCACGCCCATCCCGCACCCTGGCC...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACTGCGGAGCCGCGGGCTaGATCTCTGCCAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDCGAAG*ISARPG
Trigger: CCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCA...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACGGGCCTCGTCCTCTGTaGCCCCGCGGTGACTCCAAA +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADGPRPL*PRGDSK
Trigger: TTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCC...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGCACTGTTGGGACGCGTaGGGCGCACGAGCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLHCWDA*GARAAA
Trigger: GGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTG...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp GCTCCTCTGCTCCTGGACCCGAGGGAGCCTCGAGATTaGAGTCCCTGCCCGCTTCTTGCGCACAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: APLLLDPREPRD*SPCPLLAHRLV
Trigger: CACCAGCCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCTCGGGTCCAGGAGCAGAGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCGTGGCCTGGCAGCTCTaGAGGTCCCAGATGATACAT +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTVAWQL*RSQMIH
Trigger: ATGTATCATCTGGGACCTTCAGAGCTGCCAGGCCAC...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCCAGCTCTTGCTGCCTaGCCACCTGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCPALAA*PPAPLA
Trigger: GGCAAGAGGAGCAGGTGGTCAGGCAGCAAGAGCTGG...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGCAGCCACCGCCGCGTaGGGGAGGTTAGCACCGAAC +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLAATAA*GRLAPN
Trigger: GTTCGGTGCTAACCTCCCTCACGCGGCGGTGGCTGC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGCAGGTGGACAGCAGCTGCGTaGCACGGCTCACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ASWQCRELVFHVTQKRSRWTAAA*HGSQRP
Trigger: TGGCCTTTGTGAGCCGTGGCACGCAGCTGCTGTCCA...CCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCCGCTGGACAGCAGCTaGGTGCCACGGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADPLDSS*VPRLTK
Trigger: CTTTGTGAGCCGTGGCACGCAGCTGCTGTCCAGCGG...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCAGGTACCGCTTCTCATaGAGCAGGTTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHARYRFS*SRLSSS
Trigger: AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCAGGCCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTCAGACGCAGAAGAGGTaGTGGCCAGTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ARPTEPAAMPDWLSPAPRQTQKR*WPVWSS
Trigger: GCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTG...ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR GCA 90 bp GTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGAGTCTGGTCCAGCTGTaGTTTTCCGCCCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VSTVWGRSREMARPSARRSLVQL*FSALVE
Trigger: TTCTACAAGGGCGGAAAAGCACAGCTGGACCAGACT...CCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTAGGTCCCCAGTTCTGTaGTTCCCGCGCCTACGAGAG +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPRSPVL*FPRLRE
Trigger: CTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACCT...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACAGAGCCTGGACGTGCTaGTGCGGCACCCCTCAGGTA +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADRAWTC*CGTPQV
Trigger: TACCTGAGGGGTGCCGCAGCAGCACGTCCAGGCTCT...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCCTGCCACCCGGCAGGTaGCTGACTCGCCCCAAACTC +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGLPPGR*LTRPKL
Trigger: GAGTTTGGGGCGAGTCAGGCACCTGCCGGGTGGCAG...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCTTACCCAGGGTGGAGTaGAGTGGCGCGATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGLPRVE*SGAILF
Trigger: GAACAAGATCGCGCCACTGCACTCCACCCTGGGTAA...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGTGGGGTCGAAGGCCATaGTGGCCACGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLWGRRP*WPRGPC
Trigger: ACACGGCCCCCGTGGCCACCATGGCCTTCGACCCCA...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTAGCAGAGTGGAGGTaGGGTCGAAGGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: DGQAQRPQVPLLMQQVVQLAEWR*GRRPWW
Trigger: CCACCATGGCCTTCGACCCCACCTCCACTCTGCTAG...CTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGGTGACCACACGCGGATaGCGGCATCCGTGGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLVTTRG*RHPWPR
Trigger: CCTCGGCCACGGATGCCGCCATCCGCGTGTGGTCAC...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGGACACTGGCTCCTCTaGCAACAGCACAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EAQQGLSGRAAVGAWWLPGHWLL*QQHSSL
Trigger: GAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCC...TGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTATTAGGCAGGGGCTATTaGAGGCCACGACAACGTGGG +
Preference number: 4 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVLGRGY*RPRQRG
Trigger: CCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAA...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp AGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGCAGGACGATATCCGTGTaGCCGTGGAGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAAGPFWSRRSRSMVASSRTISV*PWRIWQ
Trigger: CTGCCAGATCCTCCACGGCCACACGGATATCGTCCT...GCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCCTGGGGCTGTGTTCTTaGACAGCAAGGCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHALGLCS*TARLWE
Trigger: TTCCCAAAGCCTTGCTGTCCAAGAACACAGCCCCAG...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGGTCCTGTGAGCCTGTaGCCAGCAGCTTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: ASWQCRELVFHVTQKRSRGPVSL*PAACRW
Trigger: CCAACGACAAGCTGCTGGCCACAGGCTCACAGGACC...CCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCAGAGGCCACGCCGGTaGCCTGAGAAGACACCCAGC +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEQRPRR*PEKTPS
Trigger: GCTGGGTGTCTTCTCAGGCCACCGGCGTGGCCTCTG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCATCAGCTGAGGCCGTaGCCAGCACCTGGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCHQLRP*PAPGPW
Trigger: CCATGGACCAGGTGCTGGCCACGGCCTCAGCTGATG...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CAGAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCACAGTCAGCACGGTGTaGGGCCGATCCAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: QKRSRAFLVAPQSEHGGFTVSTV*GRSREM
Trigger: CATCTCCCTGGATCGGCCCCACACCGTGCTGACTGT...GAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp TCAGGGTCCCTCCGGATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCGCAGTCGGAGCATGGTaGCTTCCAGCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: SGSLRMAWMTVSTVWGRSAVGAW*LPASRR
Trigger: CCTGCGAGAAGCTGGAAGCCACCATGCTCCGACTGC...GGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGACCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCGCAGCAATGCCCGACTaGCTGTCACCAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: LEGPAEPLKVPLSVGQQGAAMPD*LSPAPR
Trigger: ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGC...GCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCGTGCACAGTGGGCTCTaGAAGACCAATGCCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGVHSGL*KTNALV
Trigger: AACCAGGGCATTGGTCTTCCAGAGCCCACTGTGCAC...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTCCCAGCAGCTCTGCCTaGAAGTCCCCCAATCCCTGT +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPPSSSA*KSPNPC
Trigger: ACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGG...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTCCTCCCTCCTCCTGTaGCCAGAGGCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQESSLLL*PEAGRR
Trigger: CCTCCTGCCTGCCTCTGGCCACAGGAGGAGGGAGGA...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCCACACTCGTTGTTCTTaGTGGTCCAGAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: PQALPARLRRPAAPRGPLHTRCS*WSRASR
Trigger: TCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTG...GAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GAAGTCCAAGAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCATCCTTCCAGAGGATaGCTCGGGAGTCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: EVQESGGLEGPAEPLKVPHPSRG*LGSHWP
Trigger: GGGCCAGTGACTCCCGAGTCATCCTCTGGAAGGATG...CGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTCTTGGACTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGGCTGGGCGCTCTCCTaGGCGGGACGGGGTTCCGTG +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIGWALS*AGRGSV
Trigger: CACGGAACCCCGTCCCGCTCAGGAGAGCGCCCAGCC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCAGTCATGGCAAATCGTaGATTGAGAGGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGSHGKS*IERWFS
Trigger: TGAGAACCACCTCTCAATTCACGATTTGCCATGACT...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAAGGCATGACCGGTCCTaGAGTGACCACACGCGGATG +
Preference number: 4 (lower is better)
Translates to: ESGGLEGPAEPLKVPLSVRHDRS*SDHTRM
Trigger: CATCCGCGTGTGGTCACTGCAGGACCGGTCATGCCT...TACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTGGCAGGCTGACGTCTaGAGCTCAAACACTTTTAGG +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPWQADV*SSNTFR
Trigger: CCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCACAGCTTCACAGTaGAGTCCTGGCTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPATASQ*SPGCLS
Trigger: TGACAGGCAGCCAGGACTGCACTGTGAAGCTGTGGC...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGGTTGTCCAGCTCTTaGTGCCTGACCACCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EMARPSARRYRFSCSRLSRLSSS*CLTTCS
Trigger: GGAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCT...GGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp ATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGCAGACGCAGAAGAGGTaGTGGCCAGTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: MAWMTVSTVWGRSREMARQTQKR*WPVWSS
Trigger: GCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTG...CCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGACCGGCTAGGGCAGTaGGCCTTTATGGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPDRLGQ*AFMGFP
Trigger: TGGGAAACCCATAAAGGCGCACTGCCCTAGCCGGTC...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACAGTCTGGTCCAGCTGTaGTTTTCCGCCCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHSLVQL*FSALVE
Trigger: TTCTACAAGGGCGGAAAAGCACAGCTGGACCAGACT...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGCCATCCAGAGCCGCTaGTGCACCGTCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLAIQSR*CTVTRR
Trigger: CCTGCGTGTGACGGTGCAGCAGCGGCTCTGGATGGC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGATACTCCCCGCGGTGCTaGTGCGGCCGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRYSPRC*CGRKGW
Trigger: CCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTA...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTAGGAGAGCCTGGACGTaGTGCTGCGGCACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLRRAWT*CCGTPQ
Trigger: CTGAGGGGTGCCGCAGCAGCACGTCCAGGCTCTCCT...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTGGAGGCTCAGAGCCTaGGCTGCCTGCAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGWRLRA*AACSPS
Trigger: AGAAGGGCTGCAGGCAGCGCAGGCTCTGAGCCTCCA...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGAGGCTGCTGGCGACTaGAGAGCGCGTGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPEAAGD*RARGTE
Trigger: CTCCGTGCCACGCGCTCTGCAGTCGCCAGCAGCCTC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGACGGTGGAGGCGGGCCTaGTGCGGAGATCTGACCGCG +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRRWRRA*CGDLTA
Trigger: CGCGGTCAGATCTCCGCAGCAGGCCCGCCTCCACCG...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACCAGGCACGGTCCTCGTaGCCTGGCAGCTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RPQVPLLMQQVVQLLLPDQARSS*PGSSEG
Trigger: ACCTTCAGAGCTGCCAGGCCACGAGGACCGTGCCTG...GTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAACCCAGCTGGGACACTaGCTCCTCTGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: ESGGLEGPAEPLKVPLSVTQLGH*LLWQQH
Trigger: GTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGT...TACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTACGCGCAGAGTGCCTTaGTCGCCAGCTGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPTRRVP*SPAVRK
Trigger: CTTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGT...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGACGCGCAGAGTGCCTTaGTCGCCAGCTGTCAGAAAG +
Preference number: 4 (lower is better)
Translates to: DGQAQRPQVPLLMQQVVQTRRVP*SPAVRK
Trigger: CTTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGT...CTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCAGGGCATATCCGTGTGGCCGTaGAGGATCTGGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LEGPAEPLKVPLSVGQQGISVWP*RIWQAD
Trigger: GTCAGCCTGCCAGATCCTCCACGGCCACACGGATAT...GCCCTGCTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGATAGGGCCGTTGTCTaGGGCTGTGTTCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: RLRRPAAPRGPLASRAHPDRAVV*GCVLGQ
Trigger: CTGTCCAAGAACACAGCCCCAGACAACGGCCCTATC...TGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGCAGGGCCCAGAGCTTaGCCGTGCGGTCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPAGPRA*PCGPVS
Trigger: GCTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGAGCAGGGCCTCTTTCTaGTCGCGCCGCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLSRASF*SRRSRS
Trigger: GCTCCGACTGCGGCGCGACCAGAAAGAGGCCCTGCT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CACAGCCACCTGTGGCTAGCAGAGTGGAGGTGGGGTCGAAGGCCATGGTGGCCAAGGTGCTGGCCAGTCTaGTCCAGCTGGGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: HSHLWLAEWRWGRRPWWPRCWPV*SSWGQR
Trigger: TCTCTGTCCCCAGCTGGACCAGACTGGCCAGCACCT...TGGCCACCATGGCCTTCGACCCCACCTCCACTCTGCTAGCCACAGGTGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACACAGAGAGTGGGAGGCTaGCGGTCTTGCCGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTQRVGG*RSCRGG
Trigger: GCCACCCCGGCAAGACCGCCAGCCTCCCACTCTCTG...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTAGCGGCGTTTGGAGCTaGGAGAGGTCCAGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLSGVWS*ERSRVG
Trigger: CCCCACCCTGGACCTCTCCCAGCTCCAAACGCCGCT...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTTCGGTCAGGCCAGCCTaGGTACGGGAGCGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLSVRPA*VRERGR
Trigger: CCTTCCCCGCTCCCGTACCCAGGCTGGCCTGACCGA...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCCCTGGGTTCACACGCTaGACCCCACCAGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGPGFTR*TPPGQL
Trigger: CAGCTGACCTGGTGGGGTCCAGCGTGTGAACCCAGG...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGAGGGCTGATGGGGTGTaGGGCAGGAGCTGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWRADGV*GRSCQL
Trigger: CAGCTGACAGCTCCTGCCCCACACCCCATCAGCCCT...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTTCCGTTACCCAGGGTaGAGTGCAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELFRYPG*SAVARS
Trigger: AGATCGCGCCACTGCACTCCACCCTGGGTAACGGAA...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACCTGCGCAGCAGGGCCTTTCTaGTCGCGCCGCAGTCGGAGC +
Preference number: 4 (lower is better)
Translates to: RYRFSCSRLSSSCCLTTCAAGPF*SRRSRS
Trigger: GCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGC...GCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTCTGAAGGTCCCAGATaGTACATATCTTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPSEGPR*YISCHG
Trigger: GCCGTGACAAGATATGTATCATCTGGGACCTTCAGA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGTCTGAAGGTCCCAGATaGTACATATCTTGTCACGGC +
Preference number: 4 (lower is better)
Translates to: LLGGLSPQEHTQHGLGLVSEGPR*YISCHG
Trigger: GCCGTGACAAGATATGTATCATCTGGGACCTTCAGA...CACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGAGGATCTGGCAGGCTaGCGTCTGCAGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: ESGGLEGPAEPLKVPLSVEDLAG*RLQLKH
Trigger: GTGTTTGAGCTGCAGACGTCAGCCTGCCAGATCCTC...TACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCAGATACGGACGCTCTaGTCCTTGGCACAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADQIRTL*SLAQLA
Trigger: TGCCAGCTGTGCCAAGGATCAGAGCGTCCGTATCTG...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCAGATACGGACGCTCTaGTCCTTGGCACAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCQIRTL*SLAQLA
Trigger: TGCCAGCTGTGCCAAGGATCAGAGCGTCCGTATCTG...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCCACACTCGTTGTTCTTaGTGGTCCAGAGCTTCACGA +
Preference number: 4 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGHTRCS*WSRASR
Trigger: TCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTG...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp ACGGGGGCCGTGTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGCCACTTCCAGAATGTTaGCTCTGGTGCCACAGACGC +
Preference number: 4 (lower is better)
Translates to: TGAVCIAFHRRVTLPSCQPLPEC*LWCHRR
Trigger: GCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGG...CTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACACACGGCCCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR TCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGTCTTGCCAGGCCCACTaGGCCAGCAGCAATGCCCGA +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLSCQAH*ASSNAR
Trigger: TCGGGCATTGCTGCTGGCTCAGTGGGCCTGGCAAGA...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCCAGCGAACTGTTTCTaGAGCCGCAGGGAGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLPANCF*SRRERA
Trigger: GGCTCGCTCCCTGCGGCTGCAGAAACAGTTCGCTGG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCCCCAGAGCTTGGCCGTaGGGTCCTGTGAGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPPRAWP*GPVSLW
Trigger: CCACAGGCTCACAGGACCGCACGGCCAAGCTCTGGG...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
62% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCAGCACAGAAGCATCGTaGCCCTCAAATGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHASTEAS*PSNVLR
Trigger: TCTCAAGACATTTGAGGGGCACGATGCTTCTGTGCT...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCAGACGCAGAAGAGGTaGTGGCCAGTCTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEQTQKR*WPVWSS
Trigger: GCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCCCTCACGCCACCACTaGGGCTTGACCGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLPSRHH*GLTVWQ
Trigger: TTGCCACACGGTCAAGCCGCAGTGGTGGCGTGAGGG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGCCGCCCTCTCAAGGGTaGACAGTGGGCTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWPPSQG*TVGSGR
Trigger: TCTTCCAGAGCCCACTGTGCACCCTTGAGAGGGCGG...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGGACAGCAAGAAAGCTaGAAAGGACTCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPGQQES*KGLSWG
Trigger: GCCCCAGCTGAGTCCTTTGCAGCTTTCTTGCTGTCC...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGTCCCCCAATCCCTGTaGTCCTGCCCCCAGATCGTG +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLVPQSL*SCPQIV
Trigger: CACGATCTGGGGGCAGGAGCACAGGGATTGGGGGAC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTCACGCCTGCCCAGGCCATGTTTaGAGTAAGTCATGGCAAATC +
Preference number: 4 (lower is better)
Translates to: GRPVPREQRYAPNPTPHACPGHV*SKSWQI
Trigger: GATTTGCCATGACTTACTGCAAACATGGCCTGGGCA...GGCGTGAGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGCTAGCAGAGTGGAGGTaGGGTCGAAGGCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PTEPAAMPDWLSPAPRCQLAEWR*GRRPWW
Trigger: CCACCATGGCCTTCGACCCCACCTCCACTCTGCTAG...CTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp CAGAAGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGAAAGTACAGCCCTaGGGACTTCACACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: QKRSRAFLVAPQSEHGGFQKVQP*GLHTQL
Trigger: CAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTG...GAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGATAGGGCCGTTGTCTaGGGCTGTGTTCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPDRAVV*GCVLGQ
Trigger: CTGTCCAAGAACACAGCCCCAGACAACGGCCCTATC...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACAGGCCATCCGAACCGCTaGACAGCAGCTGCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTGHPNR*TAAACH
Trigger: GTGGCACGCAGCTGCTGTCCAGCGGTTCGGATGGCC...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCCGATCCAGGGAGATaGCCAGGCCCAGCGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIADPGR*PGPAPA
Trigger: TGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGGCCAGTCTGGTCCAGCTaGGGACAGAGAGGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLSQQQCPTGCHQHLVVRPVWSS*GQRGLC
Trigger: GCACAGACCTCTCTGTCCCCAGCTGGACCAGACTGG...CCTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp CCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGGCAGCAATGCCCGACTaGCTGTCACCAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: PTEPAAMPDWLSPAPRCQAAMPD*LSPAPR
Trigger: ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGC...CTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAGCCCTCGAGGGTGCGTaGACTCTGTGCCGCACCCCA +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRALEGA*TLCRTP
Trigger: TGGGGTGCGGCACAGAGTCCACGCACCCTCGAGGGC...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGCCAGGAGCCCGTGCTTaGTCTCCGCACCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWPGARA*SPHLEE
Trigger: TTCCTCTAGGTGCGGAGACCAAGCACGGGCTCCTGG...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACTCTCCATCCACAGTCTaGAGGCTCAGAGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADSPSTV*RLRACA
Trigger: AGCGCAGGCTCTGAGCCTCCAGACTGTGGATGGAGA...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCAATAGGGGCAGAGAGTaGGAGGCTGGCGGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGNRGRE*EAGGLA
Trigger: GGCAAGACCGCCAGCCTCCCACTCTCTGCCCCTATT...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGCCTGCCCCCAGATCGTaGGCTTGGGGGACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQEPAPRS*AWGTAR
Trigger: TCTTGCTGTCCCCCAAGCCCACGATCTGGGGGCAGG...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGGAGGATCTGGCAGGCTaGCGTCTGCAGCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEEDLAG*RLQLKH
Trigger: GTGTTTGAGCTGCAGACGTCAGCCTGCCAGATCCTC...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGCAGCATAGTTGGTCTTaGAGCGGCCCACTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLQHSWS*SGPLRP
Trigger: CGGCCGGAGTGGGCCGCTTCAAGACCAACTATGCTG...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGGGAGCCTCGAGATTTaGGTCCCTGCCCGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDGSLEI*VPARFL
Trigger: CAAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCCCTTCGTCCCTGCTaGAGCTCCCAGCCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIALRPC*SSQPLP
Trigger: TGGCAGGGGCTGGGAGCTTCAGCAGGGACGAAGGGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTTCAGGCAGCTCAAGGTaGGTGACCCTGGGCCACCCT +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLSGSSR*VTLGHP
Trigger: AGGGTGGCCCAGGGTCACTCACCTTGAGCTGCCTGA...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGACACTGCCCAGAAGCTaGCTCCCACACGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLTLPRS*LPHAQS
Trigger: ACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAGTGT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGCTGGCAGGCTGACGTCTaGAGCTCAAACACTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SAAGPFWSRRSRSMVASSWQADV*SSNTFR
Trigger: CCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCA...GCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCAGATGAGCTGTCCGTaGCCGCGGGGGCGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYQMSCP*PRGRAC
Trigger: GCACGCGCGCCCCCGCGGGCACGGACAGCTCATCTG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACAGGGATTTGCTCCTCTaGTCCTGGACCCGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDRDLLL*SWTRGS
Trigger: GCTCCCTCGGGTCCAGGAGCAGAGGAGCAAATCCCT...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACCGTTTGCCTTCTCTGTaGGCTGGTCAGACGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDRLPSL*AGQTAA
Trigger: CGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACG...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACAAAAAGTGGAAACCATaGAGGGCTGATGGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHKKWKP*RADGVW
Trigger: CCACACCCCATCAGCCCTGCATGGTTTCCACTTTTT...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTCAGGCACGGTCCTCGTaGCCTGGCAGCTCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LWKTNALVPALRRPSRRPQARSS*PGSSEG
Trigger: ACCTTCAGAGCTGCCAGGCCACGAGGACCGTGCCTG...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGACCCAGCTGGGACACTaGCTCCTCTGGCAACAGCAC +
Preference number: 4 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLTQLGH*LLWQQH
Trigger: GTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGGGCAGTGCGCCTTTATaGGTTTCCCAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLGSAPL*VSQGVG
Trigger: CCCCACCCCCTGGGAAACCCATAAAGGCGCACTGCC...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGGGCAGTGATGTCCTCCTaGTCCTCCTGCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: PLSQQQCPTGCHQHLVVRAVMSS*SSCSRL
Trigger: GAGTCTGGAGCAGGAGGACCAGGAGGACATCACTGC...CCTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTCCTGGCCAGCAGGGATaGGAGGGGGCCATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLPGQQG*EGAICC
Trigger: ACAGCAAATGGCCCCCTCCCATCCCTGCTGGCCAGG...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGCAGGCTGGTGGCTGGTaGAGAACGAAGACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQEQAGGW*RTKTGR
Trigger: TCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTG...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCGGTCTTGCCGGGGTaGCGCCCCCAGTTTCACCCT +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIAVLPG*RPQFHP
Trigger: AGGGTGAAACTGGGGGCGCCACCCCGGCAAGACCGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCGCAACCCCTGGACCTaGAGCCCGCGCTGCCACCCG +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYRNPWT*SPRCHP
Trigger: CGGGTGGCAGCGCGGGCTCCAGGTCCAGGGGTTGCG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACAATTCTCGGAGGCTGCTaGCGACTGCAGAGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTILGGC*RLQSAW
Trigger: CCACGCGCTCTGCAGTCGCCAGCAGCCTCCGAGAAT...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGTGCAAAGGACTCAGCTaGGGCGGCTCCACAAGGACC +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQECKGLS*GGSTRT
Trigger: GGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCA...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACCACTGTGTCTGTCCTTaGAGTGGATTTTGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHHCVCP*SGFCRG
Trigger: GCCCCTACAAAATCCACTCCAAGGACAGACACAGTG...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGCCACTTCCAGAATGTTaGCTCTGGTGCCACAGACGC +
Preference number: 4 (lower is better)
Translates to: GRRPAQGASCCATGSPRKPLPEC*LWCHRR
Trigger: GCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGG...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGGCGCCAGGGACCAGTaGAGCCCAAAGCGGCGTATC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIGARDQ*SPKRRI
Trigger: GATACGCCGCTTTGGGCTTCACTGGTCCCTGGCGCC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTAGGCATGACCGGTCCTaGAGTGACCACACGCGGATG +
Preference number: 4 (lower is better)
Translates to: LWKTNALVPALRRPSRRPRHDRS*SDHTRM
Trigger: CATCCGCGTGTGGTCACTGCAGGACCGGTCATGCCT...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACCGAGATTTGAGTCCCTaGCCGCTTCTTGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDRDLSP*PLLAHR
Trigger: CCTGTGCGCAAGAAGCGGGCAGGGACTCAAATCTCG...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTCCCAAACTCCCAGCATaGAGCGGCGTTTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWKTNALVPALRRPSRRPPKLPA*SGVWSW
Trigger: CCAGCTCCAAACGCCGCTGCATGCTGGGAGTTTGGG...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTTGCCTCCCACTGGACTaGCTCCCATCAGTGACTCCC +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLCLPLD*LPSVTP
Trigger: GGGAGTCACTGATGGGAGGCAGTCCAGTGGGAGGCA...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTGGCTGGGGGAACCCTaGAAATCAGCCCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEWLGEP*KSALCE
Trigger: CTCACATAGGGCTGATTTGCAGGGTTCCCCCAGCCA...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGCAGAAAGTACAGCCCTaGGGACTTCACACCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWQKVQP*GLHTQL
Trigger: CAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTG...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGGTCCTGTGAGCCTGTaGCCAGCAGCTTGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPGPVSL*PAACRW
Trigger: CCAACGACAAGCTGCTGGCCACAGGCTCACAGGACC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTTCCCTCCGGATGGCCTaGATGACAGTCAGCACGGTG +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLSLRMA*MTVSTV
Trigger: CACCGTGCTGACTGTCATCCAGGCCATCCGGAGGGA...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGGGAGAGCGGCCTTTATaGGTTTTCCAGGGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWGERPL*VFQGFR
Trigger: CCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTCC...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTCTTGCGCACAGGCTaGTGGCTGGTGGAGAACGAA +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEFLRTG*WLVENE
Trigger: TTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAA...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGAAGGTGACAGCTGGCTaGGGGAACCCTGCAAATCAG +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEKVTAG*GNPANQ
Trigger: CTGATTTGCAGGGTTCCCCCAGCCAGCTGTCACCTT...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGGAGAAGGTGACAGCTaGCTGGGGGAACCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLGEGDS*LGEPCK
Trigger: TTTGCAGGGTTCCCCCAGCCAGCTGTCACCTTCTCC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp CTCCACGGCACTCCCAACTTTTTGTCCCCCAGACGTTaGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACA +
Preference number: 4 (lower is better)
Translates to: LHGTPNFLSPRR*PSLCAGQTAAT
Trigger: TGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTGCCGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp TGCCTGGACCAGCACCTCCACGGCACTCCCAACTTTTaGTCCCCCAGACGTTTGCCTTCTCTGTGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: CLDQHLHGTPNF*SPRRLPSLCAG
Trigger: ACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTGCCGTGGAGGTGCTGGTCCAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp GAGAGAGTGCTGGTGGGACAGACACACAAAGGCCCTTaGTTGCAGCCAGGGCAGCTTCCTGGAGGGATGCCT +
Preference number: 4 (lower is better)
Translates to: ERVLVGQTHKGP*LQPGQLPGGMP
Trigger: AGGCATCCCTCCAGGAAGCTGCCCTGGCTGCAACAAAGGGCCTTTGTGTGTCTGTCCCACCAGCACTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATACCAGCTCTTGCTGCCTaGCCACCTGCTCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIPALAA*PPAPLA
Trigger: GGCAAGAGGAGCAGGTGGTCAGGCAGCAAGAGCTGG...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCACATTTCCTCCTCTATaGGTTGGGGACATTAAGAGA +
Preference number: 4 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTTFPPL*VGDIKR
Trigger: TCTCTTAATGTCCCCAACTCATAGAGGAGGAAATGT...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAGGATGCCTTAGAGGCTaGCTGCTCCCTGAAGGGGCT +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRGCLRG*LLPEGA
Trigger: AGCCCCTTCAGGGAGCAGTCAGCCTCTAAGGCATCC...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGCTGCTTAGGCTCAAGTaGTCTCCCACCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLLLRLK*SPTSAS
Trigger: GGAGGCTGAGGTGGGAGATCACTTGAGCCTAAGCAG...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACCTGCGCCACAGCTTCACAGTaGAGTCCTGGCTGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RYRFSCSRLSSSCCLTTCATASQ*SPGCLS
Trigger: TGACAGGCAGCCAGGACTGCACTGTGAAGCTGTGGC...GCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGATGGACAGCAGCTGCGTaGCACGGCTCACAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRWTAAA*HGSQRP
Trigger: TGGCCTTTGTGAGCCGTGGCACGCAGCTGCTGTCCA...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GTGTATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTGAGCGGACAGAGAGGTCTGTaGTTTTCCGCCCTTGTAGAA +
Preference number: 4 (lower is better)
Translates to: VYRLPQAGNAALLPGPLSGQRGL*FSALVE
Trigger: TTCTACAAGGGCGGAAAAGCACAGACCTCTCTGTCC...GCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR GCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGGACCATCAGCTCCAGTaGCCTTCTGGCTGGCTAGGT +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLDHQLQ*PSGWLG
Trigger: ACCTAGCCAGCCAGAAGGGCACTGGAGCTGATGGTC...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGGGATAGGAAGGGGGTaGCTGGACCAGCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIGIGRG*LDQHLH
Trigger: GTGGAGGTGCTGGTCCAGGCACCCCCTTCCTATCCC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCACAGGCTTGAGGTGTTaGCAGGATTCTATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGTGLRC*QDSIPG
Trigger: CCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGT...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCGGTGTTCATTGCCCATaGCAAGACCAGGGACAGCTT +
Preference number: 4 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGGVHCP*QDQGQL
Trigger: AAGCTGTCCCTGGTCTTGGCATGGGCAATGAACACC...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACGAGGTCTCAACATGTTaGCCAGACTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADEVSTC*PDWSRT
Trigger: AGTTCGAGACCAGTCTGGGCAACATGTTGAGACCTC...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGCTGGGGCTGTGTTCTTaGACAGCAAGGCTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: GRRPAQGASCCATGSPRKLGLCS*TARLWE
Trigger: TTCCCAAAGCCTTGCTGTCCAAGAACACAGCCCCAG...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACAGACAGCTGAAGTCCTaGAGTGCCCAGAGCTTGATG +
Preference number: 4 (lower is better)
Translates to: RPQVPLLMQQVVQLLLPDRQLKS*SAQSLM
Trigger: CATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCT...GTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCGCAGTGATGTCCTCCTaGTCCTCCTGCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPAVMSS*SSCSRL
Trigger: GAGTCTGGAGCAGGAGGACCAGGAGGACATCACTGC...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACATTGCGCACAGGCTGGTaGCTGGTGGAGAACGAAGAC +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTLRTGW*LVENED
Trigger: GTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAA...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTCGCGCCTGCAGCTGTTaGAAACCTATTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLRACSC*KPILGG
Trigger: GCCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCG...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGAGCAAGGTCTCCCCTaGGTTCACACGCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIEQGLP*VHTLDP
Trigger: GGGGTCCAGCGTGTGAACCCAGGGGAGACCTTGCTC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACAAAGCTTGTTCTGCATaGCCCCCACCGTCTAAGCGT +
Preference number: 4 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDKACSA*PPPSKR
Trigger: ACGCTTAGACGGTGGGGGTCATGCAGAACAAGCTTT...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGCAAATCAGCCCTATGTaGGCAGGTGTTCATTGCCCA +
Preference number: 4 (lower is better)
Translates to: VCLLCALVRRQRHLRAQEQISPM*AGVHCP
Trigger: TGGGCAATGAACACCTGCTCACATAGGGCTGATTTG...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCGGGAGCTTCATGTTGTaGCACAGGAAGTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCGSFML*HRKSKK
Trigger: TTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCC...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGAGAAAGGCTCAATTTTaGGCTCCACAGCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: DGQAQRPQVPLLMQQVVQRKAQF*APQHSW
Trigger: CCAACTATGCTGTGGAGCGCAAAATTGAGCCTTTCT...CTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTCCAAATGCCAGTGACTaGACAGATGGGCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLPNASD*TDGPSF
Trigger: GAAAGAGGGCCCATCTGTGCAGTCACTGGCATTTGG...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CACAGGCTTGAGGTGTTGCCAGGATTCTATCCCAGGGGGTTTTCTGGGTCCCCCAGGGGCTGGAGTAGGTaGATCCCAACACAGAACTGG +
Preference number: 4 (lower is better)
Translates to: HRLEVLPGFYPRGFSGSPRGWSR*IPTQNW
Trigger: CCAGTTCTGTGTTGGGATGCACCTACTCCAGCCCCT...GGGGGACCCAGAAAACCCCCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCAGTCGGAGCATGGTaGCTTCCAGCTTCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIAVGAW*LPASRR
Trigger: CCTGCGAGAAGCTGGAAGCCACCATGCTCCGACTGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACAAGAAAGCGGCGGCCTaGAGGGTCCTGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYKKAAA*RVLLSR
Trigger: GCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTCTT...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCAGCAATGCCCGACTaGCTGTCACCAGCACCTCGT +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIAAMPD*LSPAPR
Trigger: ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATATCCAGGGGTTCAGGATaGACTGGAGAGAGGCCGGAC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTISRGSG*TGERPD
Trigger: GTCCGGCCTCTCTCCAGTCCATCCTGAACCCCTGGA...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTACGGGACGGGGTTCCGTaGAGGAGACGACCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLRDGVP*RRRPGG
Trigger: CCCGCCGGGTCGTCTCCTCCACGGAACCCCGTCCCG...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTATTCCAGCGCCCTACCTaGAGGAGGCGGCCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLFQRPT*RRRPRA
Trigger: GGCCCGGGGCCGCCTCCTCCAGGTAGGGCGCTGGAA...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGCACAGTACGTTTTTGTaGTGCCTTAAGATGCACCAC +
Preference number: 4 (lower is better)
Translates to: GPQFCASRAYESSRADELHSTFL*CLKMHH
Trigger: GTGGTGCATCTTAAGGCACCACAAAAACGTACTGTG...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCACGCCTCCAGGGCTaGAAAGCTCATTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQEARLQG*KAHSSS
Trigger: AGAAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTGC...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACATTGTTGGGCGCACCCTaGCAGGGCAATTACCTCACA +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTLLGAP*QGNYLT
Trigger: TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAA...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp CAGCAGTCCCGCCTACCCTTCGCCCCTTCTTCAGTCTaGCACGCCTCCAGGGCTGGAAAGCTCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQSRLPFAPSSV*HASRAGKLILL
Trigger: AAGAAGAATGAGCTTTCCAGCCCTGGAGGCGTGCAAGACTGAAGAAGGGGCGAAGGGTAGGCGGGACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAAGGACCCCACAGGCTTaGGGTGTTGCCAGGATTCTA +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRRTPQA*GVARIL
Trigger: TAGAATCCTGGCAACACCTCAAGCCTGTGGGGTCCT...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGACAGCTTGAGGGCATaGGAGAGAGTGCTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIDSLRA*ERVLVG
Trigger: TCCCACCAGCACTCTCTCTCATGCCCTCAAGCTGTC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCCTGACCACCTGCAGGTACCGCTTCTCATaGAGCAGGTTGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RYRFSCSRLSSSCCLTTCRYRFS*SRLSSS
Trigger: AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT...GCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR GCA 90 bp TATCGCCTTCCACAGGCGGGTAACGCTGCCCTCTTGCCAGGCCCACTGAGCCAGAGAAAGGCTCAATTTTaGGCTCCACAGCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: YRLPQAGNAALLPGPLSQRKAQF*APQHSW
Trigger: CCAACTATGCTGTGGAGCGCAAAATTGAGCCTTTCT...CTGGCTCAGTGGGCCTGGCAAGAGGGCAGCGTTACCCGCCTGTGGAAGGCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTACCGCGGGGGCGCGCGTaGGCGTGTTGGAAACGTCAG +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLPRGRA*ACWKRQ
Trigger: CTGACGTTTCCAACACGCGCACGCGCGCCCCCGCGG...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCAGCGACACCTTCGTaGGCAGGAGTTGGGACGAAT +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIAATPS*AGVGTN
Trigger: ATTCGTCCCAACTCCTGCGCACGAAGGTGTCGCTGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATATGTCCCCCAGACGTTTaGCTTCTCTGTGCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTICPPDV*LLCALV
Trigger: GACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACA...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp CCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGCTGCTCAGACAAAGCATCGTaGCCCTCAAATGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PSARRYRFSCSRLSSSCCSDKAS*PSNVLR
Trigger: TCTCAAGACATTTGAGGGGCACGATGCTTTGTCTGA...GCAGCAAGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAAGGTGCTGGCCAGTCTaGTCCAGCTGTGCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIRCWPV*SSCAFP
Trigger: CGGAAAAGCACAGCTGGACCAGACTGGCCAGCACCT...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGATTCGTGCGCAGGAGTTaGGACGAATTCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRFVRRS*DEFRQL
Trigger: GAGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAA...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATACCAGTTCAAAGTTGTTaGGCGCACCCTGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIPVQSC*AHPGRA
Trigger: TGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGG...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp CCCCAGGCCAGTTCAAAGTTGTTGGGCGCACCCTGGCAGGGCAATTACCTCACACCAACACAGAACTGGTaGCCCCAGCACGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PQASSKLLGAPWQGNYLTPTQNW*PQHEEK
Trigger: TTTTTCCTCGTGCTGGGGCCACCAGTTCTGTGTTGG...TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCATCCTTCCAGAGGATaGCTCGGGAGTCACTGGCCC +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYHPSRG*LGSHWP
Trigger: GGGCCAGTGACTCCCGAGTCATCCTCTGGAAGGATG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCCTGCTGCGGAGATCTaGCCGCGTTCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYPAAEI*PRSPKA
Trigger: AGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCAGG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GAGCTGTCAGCTGGGGTAGGCAGGTGGCCTCAGAATCCCTCTAGGCCTCTGCTTGGGAGCTTCATGTTGTaGCACAGGAAGTCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ELSAGVGRWPQNPSRPLLGSFML*HRKSKK
Trigger: TTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCC...AAGCAGAGGCCTAGAGGGATTCTGAGGCCACCTGCCTACCCCAGCTGACAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp TGCCCGCTTCTTGCGCACAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACAGTACGTTTTTGTGGTaGCTTAAGATGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: CPLLAHRLVAGGERRPADSTFLW*LKMHHC
Trigger: ACAGTGGTGCATCTTAAGGCACCACAAAAACGTACT...GTCTGCCGGTCTTCGTTCTCCACCAGCCACCAGCCTGTGCGCAAGAAGCGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCCTTAGAGGCTGACTaGTCCCTGAAGGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYALEAD*SLKGLE
Trigger: CTCCAGCCCCTTCAGGGAGCAGTCAGCCTCTAAGGC...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGGACACTGGCTCCTCTaGCAACAGCACAGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYGHWLL*QQHSSL
Trigger: GAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCC...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAAGGCCCAGGAGAGCCTaGACGTGCTGCTGCGGCACC +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLRPRRA*TCCCGT
Trigger: GGTGCCGCAGCAGCACGTCCAGGCTCTCCTGGGCCT...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp GGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTaGAATGTGGCTTCCGAAGCCCGAACTATAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GPSTRKNHCVPG*NVASEARTIRK
Trigger: CTTCCTTATAGTTCGGGCTTCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGAGAAAGGCTCAATTTTaGGCTCCACAGCATAGTTGG +
Preference number: 4 (lower is better)
Translates to: RPPIPSFSARGSPGADQERKAQF*APQHSW
Trigger: CCAACTATGCTGTGGAGCGCAAAATTGAGCCTTTCT...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATATGTGGTGCCTTAAGATaGACCACTGTTGGGACGCGT +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTICGALR*TTVGTR
Trigger: ACGCGTCCCAACAGTGGTGCATCTTAAGGCACCACA...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACATCAGTGACTCCCACTaGAGGCCCTTCGTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYISDSH*RPFVPA
Trigger: AGCAGGGACGAAGGGCCTCCAGTGGGAGTCACTGAT...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGCATACAGATGGAGGGTaGGGTGTACTATTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLHTDGG*GVLFRQ
Trigger: TTGCCTGAATAGTACACCCCACCCTCCATCTGTATG...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGAGCCTCCCAAAGTACTTaGATTACAGGTGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: WPQHEEKPLCARVECGFRASQST*ITGEAL
Trigger: CAGTGCCTCACCTGTAATCCAAGTACTTTGGGAGGC...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp CCAGTGAAGCCCAAAGCGGCGTATCACAGTACGTTTTaGTGGTGCCTTAAGATGCACCACTGTTGGGACGCG +
Preference number: 4 (lower is better)
Translates to: PVKPKAAYHSTF*WCLKMHHCWDA
Trigger: CGCGTCCCAACAGTGGTGCATCTTAAGGCACCACAAAAACGTACTGTGATACGCCGCTTTGGGCTTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp TTGGTTCTGCACAGAAATCCCCAGGCCAGTTCAAAGTaGTTGGGCGCACCCTGGCAGGGCAATTACCTCACA +
Preference number: 4 (lower is better)
Translates to: LVLHRNPQASSK*LGAPWQGNYLT
Trigger: TGTGAGGTAATTGCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTGGGGATTTCTGTGCAGAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGAATGTGGAGAAGGGTaGGGGCGGGCCTCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLECGEG*GRASSS
Trigger: AGAGGACGAGGCCCGCCCGCACCCTTCTCCACATTC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGCCTTCTCTGTGCGCTaGTCAGACGGCAGCGACACC +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLAFSVR*SDGSDT
Trigger: GGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp CTCTGGAAGACCAATGCCCTGGTTCCCGCCCTCAGAAGACCCTCAAGGAGACCTTGGCAAATCGTGAATTaGGAGGTGGTTCTCAAAACA +
Preference number: 4 (lower is better)
Translates to: LWKTNALVPALRRPSRRPWQIVN*EVVLKT
Trigger: TGTTTTGAGAACCACCTCTCAATTCACGATTTGCCA...AGGTCTCCTTGAGGGTCTTCTGAGGGCGGGAACCAGGGCATTGGTCTTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTATGCGGCTTGACCGTGTaGCAAGACTGGGCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLCGLTV*QDWARS
Trigger: GCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCA...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAGAGCCCGACGATCACTaGCTTCTTCGCACCGCAACC +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLEPDDH*LLRTAT
Trigger: GGTTGCGGTGCGAAGAAGCCAGTGATCGTCGGGCTC...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR GCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAAAGGGGCAGCCCTGGTaGAGATCAAGAGGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLKGQPW*RSRGSK
Trigger: CTTGGAGCCTCTTGATCTGCACCAGGGCTGCCCCTT...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CCA 90 bp AGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACGCATTTAAGGACGATATCCGTGTaGCCGTGGAGGATCTGGCAG +
Preference number: 4 (lower is better)
Translates to: RSAPPPACIEQLTIITHLRTISV*PWRIWQ
Trigger: CTGCCAGATCCTCCACGGCCACACGGATATCGTCCT...TAAATGCGTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR TCA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATACATTTGCTGTTCCTCTaGGTAAAGCTTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIHLLFL*VKLVLH
Trigger: ATGCAGAACAAGCTTTACTCAGAGGAACAGCAAATG...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp TCAGACAAAGCACTTAAAGCTGTAAGCACTGAGTCCTaGGTTCTGCACAGAAATCCCCAGGCCAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SDKALKAVSTES*VLHRNPQASSK
Trigger: CTTTGAACTGGCCTGGGGATTTCTGTGCAGAACCAAGGACTCAGTGCTTACAGCTTTAAGTGCTTTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
3UTR CAA 72 bp AATTACGCATTTAACACACATTTCCTCCTCTATGAGTaGGGGACATTAAGAGACCTTTCCTCCAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: NYAFNTHFLLYE*GTLRDLSSSIR
Trigger: CCTAATGCTGGAGGAAAGGTCTCTTAATGTCCCCAACTCATAGAGGAGGAAATGTGTGTTAAATGCGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS GCA 90 bp AGGACCACGCCGGCGGTGTGTGCCAGGGTGCAGTGGGTCAGCTCCTaGCCAGGGCCCGGCGGCTGGGCCTGCGTGTACACACACTGCCCA +
Preference number: 5 (lower is better)
Translates to: RTTPAVCARVQWVSS*PGPGGWACVYTHCP
Trigger: TGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCGGGCCCTGGGCAGGAGCTGACCCACTGCACCCTGGCACACACCGCCGGCGTGGTCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS-3UTR CAA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACGCGCGCGTGCGCGTGTaGGAAACGTCAGACCGCGGC +
Preference number: 5 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHARVRV*ETSDRG
Trigger: GCCGCGGTCTGACGTTTCCAACACGCGCACGCGCGC...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCACTGTGTGCCAGGGTaGAATGTGGCTTCCGAAGCC +
Preference number: 5 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALHCVPG*NVASEA
Trigger: GGCTTCGGAAGCCACATTCAACCCTGGCACACAGTG...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS GCA 90 bp TCGGGAGTCACTGGCCCCAGTGAGGGCGTGGTCGTCCAGCCGGCGTaGAGCCCCCAGACCTTGTCCTCGTGGGCATCCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: SGVTGPSEGVVVQPA*SPQTLSSWASSVRT
Trigger: TGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTCCCGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GTGCGGAGCCGCGGGCTGGATCTCTGCCAGGCCAGGGTGCGGGATGGGCGTGGCCACGCGCAGAGTGCCTaGGTCGCCAGCTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: VRSRGLDLCQARVRDGRGHAQSA*VASCQK
Trigger: TTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGTG...GCCACGCCCATCCCGCACCCTGGCCTGGCAGAGATCCAGCCCGCGGCTCCGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCGGCACTCCCAACTTTTaGTCCCCCAGACGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALGTPNF*SPRRLP
Trigger: AGGCAAACGTCTGGGGGACAAAAAGTTGGGAGTGCC...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CGGGCGGGCCTACTCCCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCAAGGACCCCACAGGCTaGAGGTGTTGCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: RAGLLPAVLLRPEGLGALKDPTG*RCCQDS
Trigger: AGAATCCTGGCAACACCTCAAGCCTGTGGGGTCCTT...GAGAGCGCCCAGCCCTTCCGGCCGCAGCAGCACCGCGGGGAGTAGGCCCGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp GGGAGCGAGCCTCGTAGAGCAACAGGTTGTGGTCGGCGGTGGCGGTaGGGACCACGCCGGCGGTGTGTGCCAGGGTGCAGTGGGTCAGCT +
Preference number: 5 (lower is better)
Translates to: GSEPRRATGCGRRWR*GPRRRCVPGCSGSA
Trigger: AGCTGACCCACTGCACCCTGGCACACACCGCCGGCGTGGTCCTCACCGCCACCGCCGACCACAACCTGTTGCTCTACGAGGCTCGCTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS TCA 90 bp GCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGGCCTCTTTCTGGTCGCGCCGCAGTC +
Preference number: 5 (lower is better)
Translates to: ARPGPRGSAASWCST*RRSAAGPLSGRAAV
Trigger: GACTGCGGCGCGACCAGAAAGAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
CDS GCA 90 bp GAGTCACTGGCCCCAGTGAGGGCGTGGTCGTCCAGCCGGCTGCAGTaGAGCCCCCAGACCTTGTCCTCGTGGGCATCCAGCGTCCGCACA +
Preference number: 5 (lower is better)
Translates to: ESLAPVRAWSSSRLQ*SPQTLSSWASSVRT
Trigger: TGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CCA 90 bp ACGCACCAGAGGCCACGCCGGTGGCCTGAGAAGACACCCAGCAGCTaGCACTGTGGCAGGGCCCAGAGCTTGGCCGTGCGGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: THQRPRRWPEKTPSS*HCGRAQSLAVRSCE
Trigger: CTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGCCACAGTGCCAGCTGCTGGGTGTCTTCTCAGGCCACCGGCGTGGCCTCTGGTGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CCA 90 bp GACGCACCAGAGGCCACCCGGTGGCCTGAGAAGACACCCAGCAGCTaGCACTGTGGCAGGGCCCAGAGCTTGGCCGTGCGGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DAPEATRWPEKTPSS*HCGRAQSLAVRSCE
Trigger: CTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGCCACAGTGCCAGCTGCTGGGTGTCTTCTCAGGCCACCGGGTGGCCTCTGGTGCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGAGGAGGATAGGGCCGTaGTCTGGGGCTGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLRRIGP*SGAVFL
Trigger: CAAGAACACAGCCCCAGACAACGGCCCTATCCTCCT...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGCACGGCCTGGGCCTCGTGCCTGTGGCCAGCAGCTaGTCGTTGGGGGCAATAGCC +
Preference number: 5 (lower is better)
Translates to: LLGGLSPQEHTQHGLGLVPVASS*SLGAIA
Trigger: GGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGG...CACGAGGCCCAGGCCGTGCTGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAG +
Preference number: 5 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSWQCRE*VFHVTQ
Trigger: CTGCGTCACGTGGAACACCAACTCGCGGCACTGCCA...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GTGCGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCGCCCCTTCTTCAGTCTaGCACGCCTCCAGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: VRAGLVLCGPAVTPNTHSAPSSV*HASRAG
Trigger: TCCAGCCCTGGAGGCGTGCAAGACTGAAGAAGGGGC...GGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGGTGAGCAGGTGTTCATaGCCCATGCCAAGACCAGGG +
Preference number: 5 (lower is better)
Translates to: DAPLLGRVGRTSRGLARLVSRCS*PMPRPG
Trigger: CCCTGGTCTTGGCATGGGCAATGAACACCTGCTCAC...CAGGCGCGCCAGGCCGCGGCTCGTGCGCCCCACGCGTCCCAACAGTGGTGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS CCA 90 bp TCCTTCCAGAGGATGACTCGGGAGTCACTGGCCCCAGTGAGGGCGTaGTCGTCCAGCCGGCGTGCAGCCCCCAGACCTTGTCCTCGTGGG +
Preference number: 5 (lower is better)
Translates to: SFQRMTRESLAPVRA*SSSRRAAPRPCPRG
Trigger: CCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTCCCGAGTCATCCTCTGGAAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTGCGCGCCTGCAGCTGTaGGAAACCTATTCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPARLQL*ETYSRR
Trigger: CCTCCGAGAATAGGTTTCCAACAGCTGCAGGCGCGC...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGGGGGAAGGCGGTGGCTaGCCTGGGGGCGCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLGEGGG*PGGARD
Trigger: GTCCCTGGCGCCCCCAGGCAAGCCACCGCCTTCCCC...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CGGGCGGGCCTCGTCCTCTGTGGCCCCGCGGTGACTCCAAACACCCACTCCCACCCCCAGATCGTGGGCTaGGGGGACAGCAAGAAAGCT +
Preference number: 5 (lower is better)
Translates to: RAGLVLCGPAVTPNTHSHPQIVG*GDSKKA
Trigger: AGCTTTCTTGCTGTCCCCCAAGCCCACGATCTGGGG...GTGGGAGTGGGTGTTTGGAGTCACCGCGGGGCCACAGAGGACGAGGCCCGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp CAGCTGGCACTGTGGCAGGGCCCAGAGCTTGGCCGTGCGGTCCTGTaGGCCTGTGGCCAGCAGCTTGTCGTTGGGGGCAATAGCCACGCT +
Preference number: 5 (lower is better)
Translates to: QLALWQGPELGRAVL*ACGQQLVVGGNSHA
Trigger: AGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCCAAGCTCTGGGCCCTGCCACAGTGCCAGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS GCA 90 bp AGGGCCCGGCGGCTGGGCCTGCGTGTACACACACTGCCCAGAAGCTaGCTCCCACACGCGCAGAGTGCCTTGGTCGCCAGCTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: RARRLGLRVHTLPRS*LPHAQSALVASCQK
Trigger: TTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCGGGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp ACCTGGTCCATGGGAGAGAACTGGACGCACCAGAGGCCACGCCGGTaGCCTGAGAAGACACCCAGCAGCTGGCACTGTGGCAGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: TWSMGENWTHQRPRR*PEKTPSSWHCGRAQ
Trigger: CTGGGCCCTGCCACAGTGCCAGCTGCTGGGTGTCTTCTCAGGCCACCGGCGTGGCCTCTGGTGCGTCCAGTTCTCTCCCATGGACCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CCA 90 bp TCCTTCCAGAGGATGACTCGGGAGTCACTGGCCCCAGTGAGGGCGTaGTCGTCCAGCCGGCTGCAGTGCAGCCCCCAGACCTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: SFQRMTRESLAPVRA*SSSRLQCSPQTLSS
Trigger: CGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTCCCGAGTCATCCTCTGGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CCA 90 bp AGAAGCGCAGCAGGGCCTCTTTCTGGTCGCGCCGCAGTCGGAGCATaGTGGCTTCCAGCTTCTCGCAGGCCTCAGGGTCCCTCCGGATGG +
Preference number: 5 (lower is better)
Translates to: RSAAGPLSGRAAVGA*WLPASRRPQGPSGW
Trigger: CCATCCGGAGGGACCCTGAGGCCTGCGAGAAGCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGAGGCCCTGCTGCGCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
CDS CCA 90 bp ACCTTCCAGAGGATGACTCGGGAGTCACTGGCCCCAGTGAGGGCGTaGTCGTCCAGCCGGCTGCAGTGCAGCCCCCAGACCTTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TFQRMTRESLAPVRA*SSSRLQCSPQTLSS
Trigger: CGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGTGACTCCCGAGTCATCCTCTGGAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS-3UTR CAA 90 bp GTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCAGGAGGATAGGGCCGTaGTCTGGGGCTGTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: VGPIQGDGQAQRPQVPLLRRIGP*SGAVFL
Trigger: CAAGAACACAGCCCCAGACAACGGCCCTATCCTCCT...GAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp CCACTGCGGCTTGACCGTGTGGCAAGACTGGGCCAGAAGCACCGCGGGCAGGGCCAGGTTGTCCAGCTCTaGCTGCCTGACCACCTGCTC +
Preference number: 5 (lower is better)
Translates to: PLRLDRVARLGQKHRGQGQVVQL*LPDHLL
Trigger: GAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTG...GCCCTGCCCGCGGTGCTTCTGGCCCAGTCTTGCCACACGGTCAAGCCGCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTGTCACCAGCACCTCGTaGTCAGGGCTGAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPVTSTS*SGLRSK
Trigger: CTTTGACCTCAGCCCTGACAACGAGGTGCTGGTGAC...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTTGTCCCCCAGACGTTaGCCTTCTCTGTGCGCTGGT +
Preference number: 5 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPLSPRR*PSLCAG
Trigger: ACCAGCGCACAGAGAAGGCAAACGTCTGGGGGACAA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACGCCAGTTCAAAGTTGTaGGGCGCACCCTGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHASSKL*GAPWQG
Trigger: GCCCTGCCAGGGTGCGCCCAACAACTTTGAACTGGC...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp CCGCTCCAGCTGAAACCTGCTAGGGTCCCGGCAGCCACCGCCGCGTaGGGGAGGTTAGCACCGAACTCTTCACAGAACGCCACACTCCCG +
Preference number: 5 (lower is better)
Translates to: PLQLKPARVPAATAA*GRLAPNSSQNATLP
Trigger: CGGGAGTGTGGCGTTCTGTGAAGAGTTCGGTGCTAACCTCCCTCACGCGGCGGTGGCTGCCGGGACCCTAGCAGGTTTCAGCTGGAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS CCA 90 bp GGCGTGGTCGTCCAGCCGGCGTGCAGCCCCCAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACACACTCGTTGTTCTTGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GVVVQPACSPQTLSS*ASSVRTHSLFLMVQ
Trigger: CTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGACCACGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCCAGATGATACATATCTaGTCACGGCCGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: GLKRCPHAFVGQQLLGGLQMIHI*SRPELS
Trigger: GCTCAGCTCCGGCCGTGACAAGATATGTATCATCTG...GAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGCTCAGTGTAGGGCAGCACGCGCAGAGTGCCTaGGTCGCCAGCTGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: GGLEGPAEPLKVPLSVGQHAQSA*VASCQK
Trigger: TTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGTG...CTGCCCTACACTGAGCGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp CCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTATGCGCCTAACCCCACCCCTTTGGACAGCAAGGCTTaGGGAAGAGGCCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: PGGRPVPREQRYAPNPTPLDSKA*GRGHSF
Trigger: GAAGCTGTGGCCTCTTCCCAAAGCCTTGCTGTCCAA...AGGGGTGGGGTTAGGCGCATACCGCTGCTCCCTAGGGACGGGCCTCCCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCTTGGACAGCAAGGCTTaGGGAAGAGGCCACAGCTTC +
Preference number: 5 (lower is better)
Translates to: PQALPARLRRPAAPRGPLLDSKA*GRGHSF
Trigger: GAAGCTGTGGCCTCTTCCCAAAGCCTTGCTGTCCAA...GAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCATGCAGCAGGTTGTCCAGCTCTTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAG +
Preference number: 5 (lower is better)
Translates to: ARPSARRYRFSCSRLSSSWQCRE*VFHVTQ
Trigger: CTGCGTCACGTGGAACACCAACTCGCGGCACTGCCA...AGAGCTGGACAACCTGCTGCATGAGAAGCGGTACCTGCGGGCGCTGGGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp ATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTG +
Preference number: 5 (lower is better)
Translates to: MAWMTVSTVWGRSREMARASSLS*GAIATL
Trigger: CAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGC...CCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GTGGGGCCGATCCAGGGAGATGGCCAGGCCCAGCGCCCGCAGGTACCGCTTCTCTGCCCCTCAAATGTCTaGAGACAGCTGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VGPIQGDGQAQRPQVPLLCPSNV*RQLKSW
Trigger: CCAGGACTTCAGCTGTCTCAAGACATTTGAGGGGCA...GAGAAGCGGTACCTGCGGGCGCTGGGCCTGGCCATCTCCCTGGATCGGCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp CGCCTTCGTAGGCCAGCAGCTCCTCGGGGGCCTCTCGCCTCAAGAGCACACCCAGTCACCAGCACCTCGTaGTCAGGGCTGAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: RLRRPAAPRGPLASRAHPVTSTS*SGLRSK
Trigger: CTTTGACCTCAGCCCTGACAACGAGGTGCTGGTGAC...TGGGTGTGCTCTTGAGGCGAGAGGCCCCCGAGGAGCTGCTGGCCTACGAAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS TCA 90 bp GCTCCAGACTCCGCAGCACGGCCCCCGAGGCCACTTCCAGAATGTTaGCTCTGGTGCCACAGACGCAGAAGAGGTGCTGGCCAGTCTGGT +
Preference number: 5 (lower is better)
Translates to: APDSAARPPRPLPEC*LWCHRRRRGAGQSG
Trigger: ACCAGACTGGCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGCCTCGGGGGCCGTGCTGCGGAGTCTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561907.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp TGGTCGTCCAGCCGGCTGCAGTGCAGCCCCCAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACACACTCGTTGTTCTTGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: WSSSRLQCSPQTLSS*ASSVRTHSLFLMVQ
Trigger: CTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS-3UTR CAA 90 bp GTGCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTATCTGGGGCTGTGTTCTaGGACAGCAAGGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VPLSVGQQGLKRCPHAFVSGAVF*DSKALG
Trigger: TCCCAAAGCCTTGCTGTCCAAGAACACAGCCCCAGA...TACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GCCGCACCCCACGACGGAGCAGTGAGCGCGAGGATCCCGATGAGGGGATGGACCACAGGGAGCTTCATGTaGTGCCACAGGAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: AAPHDGAVSARIPMRGWTTGSFM*CHRKSK
Trigger: CTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGT...GGTCCATCCCCTCATCGGGATCCTCGCGCTCACTGCTCCGTCGTGGGGTGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AGCGCAGCAGGGCCTTTCTGGTCGCGCCGCAGTCGGAGCATGGTGGCTTCCAGCGCCACTTCCAGAATGTaGACTCTGGTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: SAAGPFWSRRSRSMVASSATSRM*TLVPQT
Trigger: CGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGC...GCTGGAAGCCACCATGCTCCGACTGCGGCGCGACCAGAAAGGCCCTGCTGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS CCA 90 bp GTACAGCCCTGGGGACTTCACACCCAGCTGGGACACTGGCTCCTCTaGCAACAGCACAGCAGCCTCCACGCTCTCAAACACAGGCACGGT +
Preference number: 5 (lower is better)
Translates to: VQPWGLHTQLGHWLL*QQHSSLHALKHRHG
Trigger: ACCGTGCCTGTGTTTGAGAGCGTGGAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp TCGCCAGCTGTCAGAAAGTACAGCCCTGGGGACTTCACACCCAGCTaGGACACTGGCTCCTCTGGCAACAGCACAGCAGCCTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: SPAVRKYSPGDFTPS*DTGSSGNSTAASTL
Trigger: GAGCGTGGAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTGACAGCTGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp CACGCGCAGAGTGCCTTGGTCGCCAGCTGTCAGAAAGTACAGCCCTaGGGACTTCACACCCAGCTGGGACACTGGCTCCTCTGGCAACAG +
Preference number: 5 (lower is better)
Translates to: HAQSALVASCQKVQP*GLHTQLGHWLLWQQ
Trigger: CTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTGACAGCTGGCGACCAAGGCACTCTGCGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp TGGGGAGGGTCTGGAGCGCCACTTACCTTGAGACAGCTGAAGTCCTaGAGTGCCCAGAGCTTGATGGTGCCATCAGCTGAGGCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: WGGSGAPLTLRQLKS*SAQSLMVPSAEAVA
Trigger: GGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGGTAAGTGGCGCTCCAGACCCTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CCA 90 bp GGGGTAGGGCATGAGATGTCACCAGGGCGGGAAGTGGGGAGGGTCTaGAGCGCCACTTACCTTGAGACAGCTGAAGTCCTGGAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: GVGHEMSPGREVGRV*SATYLETAEVLECP
Trigger: TGGGCACTCCAGGACTTCAGCTGTCTCAAGGTAAGTGGCGCTCCAGACCCTCCCCACTTCCCGCCCTGGTGACATCTCATGCCCTACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS-3UTR CAA 90 bp GCCGCTCAGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGGCAATAGCCACGCTGTaGATGTCCTTATCATGGCAG +
Preference number: 5 (lower is better)
Translates to: AAQCRAAGPQALPARLRRAIATL*MSLSWQ
Trigger: CTGCCATGATAAGGACATCAACAGCGTGGCTATTGC...CCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACTGAGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACCCTGTGGCCAGCAGCTaGTCGTTGGGGGCAATAGCC +
Preference number: 5 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDPVASS*SLGAIA
Trigger: GGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGG...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GAAGTCCAAGAAAGCGGCGGCCTGGAGGGTCCTGCTGAGCCGCTGAAAGTGCCGTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: EVQESGGLEGPAEPLKVPWSAQS*MVPSAE
Trigger: CTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCA...CGGCACTTTCAGCGGCTCAGCAGGACCCTCCAGGCCGCCGCTTTCTTGGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGCAGGTTGTCCAGCTCTaGCTGCCTGACCACCTGCTC +
Preference number: 5 (lower is better)
Translates to: GRRPAQGASCCATGSPRKQVVQL*LPDHLL
Trigger: GAGCAGGTGGTCAGGCAGCAAGAGCTGGACAACCTG...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp AGTGTAGGGCAGCAGGGCCTCAAGCGCTGCCCGCACGCCTTCGTAGGCCAGCAGACAGGGAGCTTCATGTaGTGCCACAGGAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: SVGQQGLKRCPHAFVGQQTGSFM*CHRKSK
Trigger: CTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGT...CTGCTGGCCTACGAAGGCGTGCGGGCAGCGCTTGAGGCCCTGCTGCCCTACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GCCAGGCCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTGCCACTTCCAGAATGTaGACTCTGGTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: ARPTEPAAMPDWLSPAPRATSRM*TLVPQT
Trigger: CGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGC...ACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGGCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CAA 90 bp GGTCCCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGGCCACTTCCAGAATGTaGACTCTGGTGCCACAGACG +
Preference number: 5 (lower is better)
Translates to: GPQFCASRAYESSRADELATSRM*TLVPQT
Trigger: CGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGC...CAGCTCATCTGCGCGGCTGCTCTCGTAGGCGCGGGAAGCACAGAACTGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp TTCTTCTTCCTCCCAGCAGCTCTGCCTGGAAGTCCCCCAATCCCTGTGCTCCTGCGCCACCACTGCGGCTaGACCGTGTGGCAAGACTGG +
Preference number: 5 (lower is better)
Translates to: FFFLPAALPGSPPIPVLLRHHCG*TVWQDW
Trigger: CCAGTCTTGCCACACGGTCAAGCCGCAGTGGTGGCG...CAGGAGCACAGGGATTGGGGGACTTCCAGGCAGAGCTGCTGGGAGGAAGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp ACAGCTGAAGTCCTGGAGTGCCCAGAGCTTGATGGTGCCATCAGCTaGGGCCGTGGCCAGCACCTGGTCCATGGGAGAGAACTGGACGCA +
Preference number: 5 (lower is better)
Translates to: TAEVLECPELDGAIS*GRGQHLVHGRELDA
Trigger: TGCGTCCAGTTCTCTCCCATGGACCAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS-3UTR CAA 90 bp GCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTTTAGGCAGGGGCTATaGGAGGCCACGACAACGTGG +
Preference number: 5 (lower is better)
Translates to: APDTQFQCKGQPWCRSRGFRQGL*EATTTW
Trigger: CCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAA...GCCTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCCACTGAGCCAGCAGCAATGCCCGACTGGCTGTCACCAGCACCTCGTTGTCAGGTCACCAGCACCTCGTaGTCAGGGCTGAGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PTEPAAMPDWLSPAPRCQVTSTS*SGLRSK
Trigger: CTTTGACCTCAGCCCTGACAACGAGGTGCTGGTGAC...CTGACAACGAGGTGCTGGTGACAGCCAGTCGGGCATTGCTGCTGGCTCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS-3UTR CAA 90 bp TGCTGCGGAGATCTGACCGCGTTCTCCCAAAGCTTCTCGGTCAGGCCAGCCTGGAGGGAGCCTCGAGATTaGAGTCCCTGCCCGCTTCTT +
Preference number: 5 (lower is better)
Translates to: CCGDLTAFSQSFSVRPAWREPRD*SPCPLL
Trigger: AAGAAGCGGGCAGGGACTCAAATCTCGAGGCTCCCT...CCAGGCTGGCCTGACCGAGAAGCTTTGGGAGAACGCGGTCAGATCTCCGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGCAGGCCAGTTCAAAGTaGTTGGGCGCACCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RPPIPSFSARGSPGADQEQASSK*LGAPWQ
Trigger: CTGCCAGGGTGCGCCCAACAACTTTGAACTGGCCTG...CTCTTGATCTGCACCAGGGCTGCCCCTTGCACTGAAACTGGGTATCGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp CCTTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTTaGTGGTCCAGAGCTTCACGAGGCCATCCGAACCGCTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: PCPRGHPASAHTRCS*WSRASRGHPNRWTA
Trigger: TGCTGTCCAGCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS TCA 90 bp CCTTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTTaGTGGTCCAGAGCTTCACGAGGCCATCCGAACCGCTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: PCPRGHPASAHTRCS*WSRASRGHPNRWVW
Trigger: CCAAACCCAGCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS GCA 90 bp GCCACTTCCAGAATGTTGACTCTGGTGCCACAGACGCAGAAGAGGTaGTGGCCAGTCTGGTCCAGCTGGGGACAGAGAGGTCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ATSRMLTLVPQTQKR*WPVWSSWGQRGLSQ
Trigger: CTGGCTGAGACCTCTCTGTCCCCAGCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569628.5
CDS CCA 90 bp GGCAGGCTGACGTCTGCAGCTCAAACACTTTTAGGCAGGGGCTATTaGAGGCCACGACAACGTGGGAGTCCTCGGGCCCAAGAAACCGGA +
Preference number: 5 (lower is better)
Translates to: GRLTSAAQTLLGRGY*RPRQRGSPRAQETG
Trigger: TCCGGTTTCTTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp CCAGGAGAGCGGCCTTTATGGGTTTTCCAGGGGTTCAGGATGGACTaGAGAGAGGCCGGACCGGCTAGGGCAGTGCGCCTTTATGGGTTT +
Preference number: 5 (lower is better)
Translates to: PGERPLWVFQGFRMD*REAGPARAVRLYGF
Trigger: AAACCCATAAAGGCGCACTGCCCTAGCCGGTCCGGCCTCTCTCCAGTCCATCCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTCTGGGGCTGTGTTCTaGGACAGCAAGGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: VCLLCALVRRQRHLRAQESGAVF*DSKALG
Trigger: TCCCAAAGCCTTGCTGTCCAAGAACACAGCCCCAGA...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLWSAQS*MVPSAE
Trigger: CTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCA...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCCATCCGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTACACACTCGTTGTTCTaGATGGTCCAGAGCTTCACG +
Preference number: 5 (lower is better)
Translates to: PIRLPLTRTGCPSQPGDPTHSLF*MVQSFT
Trigger: CGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGT...AGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCGGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GGGCGGCGGCCGGCACAGGGAGCTTCATGTTGTGCCACAGGAAGTCCAAGAAAGGTCCGCACACACTCGTaGTTCTTGATGGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GRRPAQGASCCATGSPRKVRTHS*FLMVQS
Trigger: GCTCTGGACCATCAAGAACAACGAGTGTGTGCGGAC...CTTTCTTGGACTTCCTGTGGCACAACATGAAGCTCCCTGTGCCGGCCGCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGAGGACAGGTGGCGCTTaGATTAGCCCTGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLRTGGA*ISPAFS
Trigger: GGAGAAGGCAGGGCTAATCAAAGCGCCACCTGTCCT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS TCA 90 bp TCCACGCTCTCAAACACAGGCACGGTCCTCGTGGCCTGGCAGCTCTaGAGGTCCCAGATGATACATATCTTGTCACGGCCGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: STLSNTGTVLVAWQL*RSQMIHILSRPELS
Trigger: GCTCAGCTCCGGCCGTGACAAGATATGTATCATCTGGGACCTTCAGAGCTGCCAGGCCACGAGGACCGTGCCTGTGTTTGAGAGCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 90 bp TGTCAGAAAGTACAGCCCTGGGGACTTCACACCCAGCTGGGACACTaGCTCCTCTGGCAACAGCACAGCAGCCTCCACGCTCTCAAACAC +
Preference number: 5 (lower is better)
Translates to: CQKVQPWGLHTQLGH*LLWQQHSSLHALKH
Trigger: GTGTTTGAGAGCGTGGAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS-3UTR CAA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTG +
Preference number: 5 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIASSLS*GAIATL
Trigger: CAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GTTTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTGCCCCTCAAATGTCTaGAGACAGCTGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VCLLCALVRRQRHLRAQECPSNV*RQLKSW
Trigger: CCAGGACTTCAGCTGTCTCAAGACATTTGAGGGGCA...CTCCTGCGCACGAAGGTGTCGCTGCCGTCTGACCAGCGCACAGAGAAGGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp ATGGCCTGGATGACAGTCAGCACGGTGTGGGGCCGATCCAGGGAGATGGCCAGGACACACTCGTTGTTCTaGATGGTCCAGAGCTTCACG +
Preference number: 5 (lower is better)
Translates to: MAWMTVSTVWGRSREMARTHSLF*MVQSFT
Trigger: CGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGT...CCTGGCCATCTCCCTGGATCGGCCCCACACCGTGCTGACTGTCATCCAGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS-3UTR CAA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAAGCATGCAGCGGCGTTaGGAGCTGGGAGAGGTCCAG +
Preference number: 5 (lower is better)
Translates to: GEPVRSAPPPACIEQLTISMQRR*ELGEVQ
Trigger: CTGGACCTCTCCCAGCTCCAAACGCCGCTGCATGCT...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTCACAAAGGCCCTTTGTaGCAGCCAGGGCAGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLHKGPL*QPGQLP
Trigger: AGGAAGCTGCCCTGGCTGCAACAAAGGGCCTTTGTG...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS GCA 90 bp AGGACGATATCCGTGTGGCCGTGGAGGATCTGGCAGGCTGACGTCTaGAGCTCAAACACTTTTAGGCAGGGGCTATTGGAGGCCACGACA +
Preference number: 5 (lower is better)
Translates to: RTISVWPWRIWQADV*SSNTFRQGLLEATT
Trigger: TGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCAGATCCTCCACGGCCACACGGATATCGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS-3UTR CAA 90 bp CGCCTACCTCTCACTCGTACGGGCTGCCCTTCCCAGCCGGGTGATCCTGCCCACTATCACAGTACGTTTTaGTGGTGCCTTAAGATGCAC +
Preference number: 5 (lower is better)
Translates to: RLPLTRTGCPSQPGDPAHYHSTF*WCLKMH
Trigger: GTGCATCTTAAGGCACCACAAAAACGTACTGTGATA...GTGGGCAGGATCACCCGGCTGGGAAGGGCAGCCCGTACGAGTGAGAGGTAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp TGGCCCCAGCACGAGGAAAAACCACTGTGTGCCAGGGTTGAATGTGGCTTCCGACTTCGTGCGCAGGAGTaGGGACGAATTCAGGCAGCT +
Preference number: 5 (lower is better)
Translates to: WPQHEEKPLCARVECGFRLRAQE*GRIQAA
Trigger: AGCTGCCTGAATTCGTCCCAACTCCTGCGCACGAAG...TCGGAAGCCACATTCAACCCTGGCACACAGTGGTTTTTCCTCGTGCTGGGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTCACAGGCTTGAGGTGTaGCCAGGATTCTATCCCAGG +
Preference number: 5 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLHRLEV*PGFYPR
Trigger: CCTGGGATAGAATCCTGGCAACACCTCAAGCCTGTG...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AAGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTACACACAAAGGCCCTTaGTTGCAGCCAGGGCAGCTT +
Preference number: 5 (lower is better)
Translates to: KKAAKDSAGAAPQGPHRLTHKGP*LQPGQL
Trigger: AAGCTGCCCTGGCTGCAACAAAGGGCCTTTGTGTGT...AAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGCAATAGCCACGCTGTaGATGTCCTTATCATGGCAG +
Preference number: 5 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDAIATL*MSLSWQ
Trigger: CTGCCATGATAAGGACATCAACAGCGTGGCTATTGC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp CCTGGCAGGGCAATTACCTCACAGGGTAGGGGAATCCAGAGAGGTGGGCAGGACGTAAGCACTGAGTCCTaGGTTCTGCACAGAAATCCC +
Preference number: 5 (lower is better)
Translates to: PGRAITSQGRGIQRGGQDVSTES*VLHRNP
Trigger: GGGATTTCTGTGCAGAACCAAGGACTCAGTGCTTAC...GTCCTGCCCACCTCTCTGGATTCCCCTACCCTGTGAGGTAATTGCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GGTGAGCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAGTCCGCACACACTCGTaGTTCTTGATGGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: GEPVRSAPPPACIEQLTIVRTHS*FLMVQS
Trigger: GCTCTGGACCATCAAGAACAACGAGTGTGTGCGGAC...TATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp AGAAAGCTGCAAAGGACTCAGCTGGGGCGGCTCCACAAGGACCCCACAGGCTTGATGGCAAATCGTGAATaGAGAGGTGGTTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: RKLQRTQLGRLHKDPTGLMANRE*RGGSQN
Trigger: GTTTTGAGAACCACCTCTCAATTCACGATTTGCCAT...CAAGCCTGTGGGGTCCTTGTGGAGCCGCCCCAGCTGAGTCCTTTGCAGCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS-3UTR CAA 90 bp GCCTGTGAGGTCTGCCCCTCCCCCAGCATGTATAGAACAGCTCACAATAATTACCAGATGATACATATCTaGTCACGGCCGGAGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ACEVCPSPSMYRTAHNNYQMIHI*SRPELS
Trigger: GCTCAGCTCCGGCCGTGACAAGATATGTATCATCTG...GTAATTATTGTGAGCTGTTCTATACATGCTGGGGGAGGGGCAGACCTCACAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS GCA 72 bp GTCGGCGGTGGCGGTGAGGACCACGCCGGCGGTGTGTaGCAGGGTGCAGTGGGTCAGCTCCTGCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: VGGGGEDHAGGV*QGAVGQLLPRA
Trigger: GGCCCTGGGCAGGAGCTGACCCACTGCACCCTGGCACACACCGCCGGCGTGGTCCTCACCGCCACCGCCGAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS GCA 72 bp CCAGGGCCCGGCGGCTGGGCCTGCGTGTACACACACTaGCCAGAAGCTGCCTCCCACACGCGCAGAGTGCCT +
Preference number: 6 (lower is better)
Translates to: PGPGGWACVYTH*PEAASHTRRVP
Trigger: AGGCACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAGTGTGTGTACACGCAGGCCCAGCCGCCGGGCCCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS GCA 72 bp GCCCCAGTGAGGGCGTGGTCGTCCAGCCGGCTGCAGTaGAGCCCCCAGACCTTGTCCTCGTGGGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: APVRAWSSSRLQ*SPQTLSSWASS
Trigger: GCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCACTGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS GCA 72 bp ACTGGCCCCAGTGAGGGCGTGGTCGTCCAGCCGGCGTaGAGCCCCCAGACCTTGTCCTCGTGGGCATCCAGC +
Preference number: 6 (lower is better)
Translates to: TGPSEGVVVQPA*SPQTLSSWASS
Trigger: GCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGACCACGCCCTCACTGGGGCCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS TCA 72 bp CCTCGTAGAGCAACAGGTTGTGGTCGGCGGTGGCGGTaGGGACCACGCCGGCGGTGTGTGCCAGGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: PRRATGCGRRWR*GPRRRCVPGCS
Trigger: ACTGCACCCTGGCACACACCGCCGGCGTGGTCCTCACCGCCACCGCCGACCACAACCTGTTGCTCTACGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS GCA 72 bp CGGCTGGGCCTGCGTGTACACACACTGCCCAGAAGCTaGCTCCCACACGCGCAGAGTGCCTTGGTCGCCAGC +
Preference number: 6 (lower is better)
Translates to: RLGLRVHTLPRS*LPHAQSALVAS
Trigger: GCTGGCGACCAAGGCACTCTGCGCGTGTGGGAGGCAGCTTCTGGGCAGTGTGTGTACACGCAGGCCCAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp GCCGAGGAGAAGAGCAGCAGGCGTGTAGGGTCCGGGTaGAAGGCCACTAGGTGCACGACACCGGGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: AEEKSSRRVGSG*KATRCTTPGEP
Trigger: AGGCTCGCCCGGTGTCGTGCACCTAGTGGCCTTCCACCCGGACCCTACACGCCTGCTGCTCTTCTCCTCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp CCAGGCATGACCGGTCCTGCAGTGACCACACGCGGATaGCGGCATCCGTGGCCGAGGAGAAGAGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: PGMTGPAVTTRG*RHPWPRRRAAG
Trigger: GCCTGCTGCTCTTCTCCTCGGCCACGGATGCCGCCATCCGCGTGTGGTCACTGCAGGACCGGTCATGCCTGG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 90 bp CCCAGTGAGGGCGTGGTCGTCCAGCCGGCGTGCAGCCCCCAGACCTaGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: PSEGVVVQPACSPQT*SSWASSVRTHSLFL
Trigger: CAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGACGACCACGCCCTCACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS TCA 72 bp GCTGAGCATGGTGTGGCCGTCGGCGCTGAAGGCCAGTaGGGTGACGGCGCTGTAGTGGGCAGTCAGCACAGC +
Preference number: 6 (lower is better)
Translates to: AEHGVAVGAEGQ*GDGAVVGSQHS
Trigger: GCTGTGCTGACTGCCCACTACAGCGCCGTCACCTCACTGGCCTTCAGCGCCGACGGCCACACCATGCTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS TCA 72 bp GGGCCTCGTGGCAGTGCCGCGAGTTGGTGTTCCACGTaGCGCAGAAGCGCAGCAGGGCCTCTTTCTGGTCGC +
Preference number: 6 (lower is better)
Translates to: GPRGSAASWCST*RRSAAGPLSGR
Trigger: GCGACCAGAAAGAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
CDS TCA 72 bp GAGAGAACTGGACGCACCAGAGGCCACCCGGTGGCCTaGGAAGACACCCAGCAGCTGGCACTGTGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: ERTGRTRGHPVA*EDTQQLALWQG
Trigger: GCCCTGCCACAGTGCCAGCTGCTGGGTGTCTTCTCAGGCCACCGGGTGGCCTCTGGTGCGTCCAGTTCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS CAA 72 bp GTCCAGAGCTTCACGAGGCCATCCGAACCGCTGGGTTaGGGGTGGGGAGAGGCTCAGCGTCAGGCAGGTCCC +
Preference number: 6 (lower is better)
Translates to: VQSFTRPSEPLG*GWGEAQRQAGP
Trigger: GGGACCTGCCTGACGCTGAGCCTCTCCCCACCCCAAACCCAGCGGTTCGGATGGCCTCGTGAAGCTCTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CAA 90 bp GTGAGGGCGTGGTCGTCCAGCCGGCTGCAGTGCAGCCCCCAGACCTaGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VRAWSSSRLQCSPQT*SSWASSVRTHSLFL
Trigger: CAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCTGGACGACCACGCCCTCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CAA 90 bp AAGAGCACACCCAGCACGGCCTGGGCCTCGTGGCAGTGCCGCGAGTaGGTGTTCCACGTGACGCAGAAGCGCAGCAGGGCCTCTTTCTGG +
Preference number: 6 (lower is better)
Translates to: KSTPSTAWASWQCRE*VFHVTQKRSRASFW
Trigger: CCAGAAAGAGGCCCTGCTGCGCTTCTGCGTCACGTGGAACACCAACTCGCGGCACTGCCACGAGGCCCAGGCCGTGCTGGGTGTGCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
CDS CCA 72 bp GTCCAGCCGGCGTGCAGCCCCCAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACACACTCGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: VQPACSPQTLSS*ASSVRTHSLFL
Trigger: CAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACGCCGGCTGGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS TCA 72 bp CTGAAACCTGCTAGGGTCCCGGCAGCCACCGCCGCGTaGGGGAGGTTAGCACCGAACTCTTCACAGAACGCC +
Preference number: 6 (lower is better)
Translates to: LKPARVPAATAA*GRLAPNSSQNA
Trigger: GGCGTTCTGTGAAGAGTTCGGTGCTAACCTCCCTCACGCGGCGGTGGCTGCCGGGACCCTAGCAGGTTTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561907.5
ENST00000568546.6
CDS TCA 72 bp TCCGCAGCACGGCCCCCGAGGCCACTTCCAGAATGTTaGCTCTGGTGCCACAGACGCAGAAGAGGTGCTGGC +
Preference number: 6 (lower is better)
Translates to: SAARPPRPLPEC*LWCHRRRRGAG
Trigger: GCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGCCTCGGGGGCCGTGCTGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561907.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp GTACAGCCCTGGGGACTTCACACCCAGCTGGGACACTaGCTCCTCTGGCAACAGCACAGCAGCCTCCACGCT +
Preference number: 6 (lower is better)
Translates to: VQPWGLHTQLGH*LLWQQHSSLHA
Trigger: AGCGTGGAGGCTGCTGTGCTGTTGCCAGAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp AGCCGGCTGCAGTGCAGCCCCCAGACCTTGTCCTCGTaGGCATCCAGCGTCCGCACACACTCGTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: SRLQCSPQTLSS*ASSVRTHSLFL
Trigger: CAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGGGCTGCACTGCAGCCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS CAA 72 bp CTCCGCAGCACGGCCCCCGAGGCCACTTCCAGAATGTaGACTCTGGTGCCACAGACGCAGAAGAGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: LRSTAPEATSRM*TLVPQTQKRCW
Trigger: CCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGCCTCGGGGGCCGTGCTGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561907.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 90 bp TGCTCCAGACTCCGCAGCACGGCCCCCGAGGCCACTTCCAGAATGTaGACTCTGGTGCCACAGACGCAGAAGAGGTGCTGGCCAGTCTGG +
Preference number: 6 (lower is better)
Translates to: CSRLRSTAPEATSRM*TLVPQTQKRCWPVW
Trigger: CCAGACTGGCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCTGGAAGTGGCCTCGGGGGCCGTGCTGCGGAGTCTGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000561907.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp TTGATGGTGCCATCAGCTGAGGCCGTGGCCAGCACCTaGTCCATGGGAGAGAACTGGACGCACCAGAGGCCA +
Preference number: 6 (lower is better)
Translates to: LMVPSAEAVAST*SMGENWTHQRP
Trigger: TGGCCTCTGGTGCGTCCAGTTCTCTCCCATGGACCAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CCA 72 bp GAGAGCGGCCTTTATGGGTTTTCCAGGGGTTCAGGATaGACTGGAGAGAGGCCGGACCGGCTAGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: ESGLYGFSRGSG*TGERPDRLGQC
Trigger: GCACTGCCCTAGCCGGTCCGGCCTCTCTCCAGTCCATCCTGAACCCCTGGAAAACCCATAAAGGCCGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568546.6
CDS CAA 72 bp TTGGCCGTGCGGTCCTGTGAGCCTGTGGCCAGCAGCTaGTCGTTGGGGGCAATAGCCACGCTGTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: LAVRSCEPVASS*SLGAIATLLMS
Trigger: GGACATCAACAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 72 bp GGCGGGAAGTGGGGAGGGTCTGGAGCGCCACTTACCTaGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: GGKWGGSGAPLT*RQLKSWSAQSL
Trigger: CAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGGTAAGTGGCGCTCCAGACCCTCCCCACTTCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CAA 90 bp AGCTTGGCCGTGCGGTCCTGTGAGCCTGTGGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTGTTGATGTCCTTATCATGGCAGCGC +
Preference number: 6 (lower is better)
Translates to: SLAVRSCEPVASSLS*GAIATLLMSLSWQR
Trigger: GCGCTGCCATGATAAGGACATCAACAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 90 bp CCCCAGACCTTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTaGTTCTTGATGGTCCAGAGCTTCACGAGGCCATCCGAACCGCTG +
Preference number: 6 (lower is better)
Translates to: PQTLSSWASSVRTHS*FLMVQSFTRPSEPL
Trigger: CAGCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGTCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 90 bp GCGCCACTTACCTTGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAGGCCGTGGCCAGCACCTGGTCCATG +
Preference number: 6 (lower is better)
Translates to: APLTLRQLKSWSAQS*MVPSAEAVASTWSM
Trigger: CATGGACCAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGGTAAGTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CAA 90 bp TGTCACCAGGGCGGGAAGTGGGGAGGGTCTGGAGCGCCACTTACCTaGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTTGATGGTGCCA +
Preference number: 6 (lower is better)
Translates to: CHQGGKWGGSGAPLT*RQLKSWSAQSLMVP
Trigger: TGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGGTAAGTGGCGCTCCAGACCCTCCCCACTTCCCGCCCTGGTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CAA 90 bp AGCTTGGCCGTGCGGTCCTGTGAGCCTGTGGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTGTTGATGTCCTGGCAATGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: SLAVRSCEPVASSLS*GAIATLLMSWQWEK
Trigger: CTTCTCCCATTGCCAGGACATCAACAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCACGGCCAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567615.1
CDS TCA 72 bp CGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTTaGTGGTCCAGAGCTTCACGAGGCCATCCGAACCGC +
Preference number: 6 (lower is better)
Translates to: RGHPASAHTRCS*WSRASRGHPNR
Trigger: GCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS GCA 72 bp TCACGAGGCCATCCGAACCGCTGGACAGCAGCTGCGTaGCACGGCTCACAAAGGCCACCTTCAGACAAAGCA +
Preference number: 6 (lower is better)
Translates to: SRGHPNRWTAAA*HGSQRPPSDKA
Trigger: TGCTTTGTCTGAAGGTGGCCTTTGTGAGCCGTGGCACGCAGCTGCTGTCCAGCGGTTCGGATGGCCTCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4
CDS CCA 72 bp AGTGCCTTGGTCGCCAGCTGTCAGAAAGTACAGCCCTaGGGACTTCACACCCAGCTGGGACACTGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: SALVASCQKVQP*GLHTQLGHWLL
Trigger: GAGGAGCCAGTGTCCCAGCTGGGTGTGAAGTCCCCAGGGCTGTACTTTCTGACAGCTGGCGACCAAGGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 72 bp GTCTTGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAGGCCGTGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: VLRQLKSWSAQS*MVPSAEAVAST
Trigger: GGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 72 bp ACCTTGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAGGCCGTGGCCAGCACC +
Preference number: 6 (lower is better)
Translates to: TLRQLKSWSAQS*MVPSAEAVAST
Trigger: GGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CAA 72 bp GTGCGGTCCTGTGAGCCTGTGGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTGTTGATGTCCTGGCAA +
Preference number: 6 (lower is better)
Translates to: VRSCEPVASSLS*GAIATLLMSWQ
Trigger: TTGCCAGGACATCAACAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567615.1
CDS CAA 90 bp TGGCAGGCTGACGTCTGCAGCTCAAACACTTTTAGGCAGGGGCTATaGGAGGCCACGACAACGTGGGAGTCCTCGGGCCCAAGAAACCGG +
Preference number: 6 (lower is better)
Translates to: WQADVCSSNTFRQGL*EATTTWESSGPRNR
Trigger: CCGGTTTCTTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 90 bp ACCTTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTaGATGGTCCAGAGCTTCACGAGGCCATCCGAACCGCTGGACAGC +
Preference number: 6 (lower is better)
Translates to: TLSSWASSVRTHSLF*MVQSFTRPSEPLDS
Trigger: GCTGTCCAGCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CCA 72 bp GCACAGAAGCATCGTGCCCCTCAAATGTCTGCAAGGTaGGGGGTAGGGCATGAGATGTCACCAGGGCGGGAA +
Preference number: 6 (lower is better)
Translates to: AQKHRAPQMSAR*GVGHEMSPGRE
Trigger: TTCCCGCCCTGGTGACATCTCATGCCCTACCCCCCACCTTGCAGACATTTGAGGGGCACGATGCTTCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS CCA 72 bp CAGACGCAGAAGAGGTGCTGGCCAGTCTGGTCCAGCTaGGGACAGAGAGGTCTGTGCTTTTCCGCCCTTGTA +
Preference number: 6 (lower is better)
Translates to: QTQKRCWPVWSS*GQRGLCFSALV
Trigger: TACAAGGGCGGAAAAGCACAGACCTCTCTGTCCCCAGCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561907.5
CDS CAA 72 bp GACGTCTGCAGCTCAAACACTTTTAGGCAGGGGCTATaGGAGGCCACGACAACGTGGGAGTCCTCGGGCCCA +
Preference number: 6 (lower is better)
Translates to: DVCSSNTFRQGL*EATTTWESSGP
Trigger: TGGGCCCGAGGACTCCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 72 bp TCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTaGATGGTCCAGAGCTTCACGAGGCCATCCGAACCG +
Preference number: 6 (lower is better)
Translates to: SWASSVRTHSLF*MVQSFTRPSEP
Trigger: CGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 90 bp CCCTCAAATGTCTTGAGACAGCTGAAGTCCTGGAGTGCCCAGAGCTaGATGGTGCCATCAGCTGAGGCCGTGGCCAGCACCTGGTCCATG +
Preference number: 6 (lower is better)
Translates to: PSNVLRQLKSWSAQS*MVPSAEAVASTWSM
Trigger: CATGGACCAGGTGCTGGCCACGGCCTCAGCTGATGGCACCATCAAGCTCTGGGCACTCCAGGACTTCAGCTGTCTCAAGACATTTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 90 bp ACCTTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTTGTTCTaGATGGTCCAGAGCTTCACGAGGCCATCCGAACCGCTGGGTTTG +
Preference number: 6 (lower is better)
Translates to: TLSSWASSVRTHSLF*MVQSFTRPSEPLGL
Trigger: CAAACCCAGCGGTTCGGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564171.1
CDS GCA 72 bp TCCGTGTGGCCGTGGAGGATCTGGCAGGCTGACGTCTaGAGCTCAAACACTTTTAGGCAGGGGCTATTGGAG +
Preference number: 6 (lower is better)
Translates to: SVWPWRIWQADV*SSNTFRQGLLE
Trigger: CTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGTCAGCCTGCCAGATCCTCCACGGCCACACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS GCA 72 bp AGAATGTTGACTCTGGTGCCACAGACGCAGAAGAGGTaGTGGCCAGTCTGGTCCAGCTGTGCTTTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: RMLTLVPQTQKR*WPVWSSCAFPP
Trigger: GGGCGGAAAAGCACAGCTGGACCAGACTGGCCAGCACCTCTTCTGCGTCTGTGGCACCAGAGTCAACATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000568546.6
ENST00000615855.4
CDS CCA 72 bp ACGTCTGCAGCTCAAACACTTTTAGGCAGGGGCTATTaGAGGCCACGACAACGTGGGAGTCCTCGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: TSAAQTLLGRGY*RPRQRGSPRAQ
Trigger: TTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGTGTTTGAGCTGCAGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CAA 72 bp GTGCGGTCCTGTGAGCCTGTGGCCAGCAGCTTGTCGTaGGGGGCAATAGCCACGCTGTTGATGTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: VRSCEPVASSLS*GAIATLLMSLS
Trigger: TGATAAGGACATCAACAGCGTGGCTATTGCCCCCAACGACAAGCTGCTGGCCACAGGCTCACAGGACCGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS CAA 72 bp TTGTCCTCGTGGGCATCCAGCGTCCGCACACACTCGTaGTTCTTGATGGTCCAGAGCTTCACGAGGCCATCC +
Preference number: 6 (lower is better)
Translates to: LSSWASSVRTHS*FLMVQSFTRPS
Trigger: GGATGGCCTCGTGAAGCTCTGGACCATCAAGAACAACGAGTGTGTGCGGACGCTGGATGCCCACGAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000332704.5
ENST00000564171.1
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
ENST00000615855.4
CDS TCA 72 bp TCAAACACAGGCACGGTCCTCGTGGCCTGGCAGCTCTaGAGGTCCCAGATGATACATATCTTGTCACGGCCG +
Preference number: 6 (lower is better)
Translates to: SNTGTVLVAWQL*RSQMIHILSRP
Trigger: CGGCCGTGACAAGATATGTATCATCTGGGACCTTCAGAGCTGCCAGGCCACGAGGACCGTGCCTGTGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS CCA 72 bp ACTTTTAGGCAGGGGCTATTGGAGGCCACGACAACGTaGGAGTCCTCGGGCCCAAGAAACCGGACATCCAAA +
Preference number: 6 (lower is better)
Translates to: TFRQGLLEATTT*ESSGPRNRTSK
Trigger: TTTGGATGTCCGGTTTCTTGGGCCCGAGGACTCCCACGTTGTCGTGGCCTCCAATAGCCCCTGCCTAAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000332704.5
ENST00000568546.6
ENST00000569628.5
ENST00000615855.4
CDS TCA 72 bp CCCCTTCCGGAACACATCCAGGGCCAGGACGATATCTaGGATGTTGTGGGGAGGTATAGGTCACACAGCAAG +
Preference number: 6 (lower is better)
Translates to: PLPEHIQGQDDI*DVVGRYRSHSK
Trigger: CTTGCTGTGTGACCTATACCTCCCCACAACATCTCAGATATCGTCCTGGCCCTGGATGTGTTCCGGAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569792.5
CDS GCA 72 bp CGGCTCACAAAGGCCACCTTCAGCACAGAAGCATCGTaGCCCTCAAATGTCTTGAGACAGCTGAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: RLTKATFSTEAS*PSNVLRQLKSW
Trigger: CCAGGACTTCAGCTGTCTCAAGACATTTGAGGGGCACGATGCTTCTGTGCTGAAGGTGGCCTTTGTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332704.5
ENST00000567615.1
ENST00000568546.6
ENST00000569628.5
ENST00000569792.5
CDS GCA 72 bp CACGGCTCACAAAGGCCACCTTCAGACAAAGCATCGTaGCCCTCAAATGTCTTGAGACAGCTGAAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: HGSQRPPSDKAS*PSNVLRQLKSW
Trigger: CCAGGACTTCAGCTGTCTCAAGACATTTGAGGGGCACGATGCTTTGTCTGAAGGTGGCCTTTGTGAGCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615855.4