RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBL1Y (Homo sapiens)

Ensembl gene IDs: ENSG00000092377

Ensembl transcript IDs: ENST00000346432.3, ENST00000355162.6, ENST00000383032.6, ENST00000651523.1

Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTGTGAGGCCCGGCCGTaGGGCGGCCGAAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRCEARP*GGRKEP
Trigger: GGGCTCTTTTCGGCCGCCGCACGGCCGGGCCTCACA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGGCGGAGCTGGGGTGTTaGCGGCTCCTCACTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRAELGC*RLLTPE
Trigger: CTCGGGAGTGAGGAGCCGCCAACACCCCAGCTCCGC...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGCGGCAGCAGCGGAGCTaGGGTGTTGGCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQRQQRS*GVGGSS
Trigger: TGAGGAGCCGCCAACACCCCAGCTCCGCTGCTGCCG...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGCGGCGGCGCGTACCTaGCCGTGTTCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQAAART*PCSEPL
Trigger: GAGAGGCTCAGAACACGGCCAGGTACGCGCCGCCGC...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGCTAGCAGCGCAACTGTaGCGGCGGCGCGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQLAAQL*RRRVPG
Trigger: GCCAGGTACGCGCCGCCGCCACAGTTGCGCTGCTAG...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGCCTCGCCTTCCAGGCTaGACCAGGGATTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQPRLPG*TRDSGV
Trigger: CACGCCAGAATCCCTGGTTCAGCCTGGAAGGCGAGG...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTGTGAGGCCCGGCCGTaGGGCGGCCGAAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCICEARP*GGRKEP
Trigger: GGGCTCTTTTCGGCCGCCGCACGGCCGGGCCTCACA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCGGCAGCAGCGGAGCTaGGGTGTTGGCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRRQQRS*GVGGSS
Trigger: TGAGGAGCCGCCAACACCCCAGCTCCGCTGCTGCCG...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCTAGCAGCGCAACTGTaGCGGCGGCGCGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRLAAQL*RRRVPG
Trigger: GCCAGGTACGCGCCGCCGCCACAGTTGCGCTGCTAG...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGTACCTGGCCGTGTTCTaGGCCTCTCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQYLAVF*ASLRRA
Trigger: TGCCCTCCTGAGAGAGGCTCAGAACACGGCCAGGTA...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACTAGCAGCGCAACTGTaGCGGCGGCGCGTACCTGGC +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSLAAQL*RRRVPG
Trigger: GCCAGGTACGCGCCGCCGCCACAGTTGCGCTGCTAG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATCTGTCTGGGGAGTCCTaGCCCTCGCCTTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: THFGADRIVFEQSCNPMHLSGES*PSPSRL
Trigger: CAGCCTGGAAGGCGAGGGGCAGGACTCCCCAGACAG...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTGCCTCTGTGGCTGCTaGACTGGCTTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRCLCGC*TGLLLS
Trigger: ACTCAGCAGCAAGCCAGTGCAGCAGCCACAGAGGCA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTGGGTGCAGACACCTTaGTCCACATCCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRWVQTP*STSHSR
Trigger: GCGACTGTGGGATGTGGAGCAAGGTGTCTGCACCCA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGCGGAGCTGGGGTGTTaGCGGCTCCTCACTCCCGAG +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQAELGC*RLLTPE
Trigger: CTCGGGAGTGAGGAGCCGCCAACACCCCAGCTCCGC...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGCGGCGGCGCGTACCTaGCCGTGTTCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQAAART*PCSEPL
Trigger: GAGAGGCTCAGAACACGGCCAGGTACGCGCCGCCGC...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGAGCCATCAGACGCGCTaGCGCCCACTTTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRSHQTR*RPLYLL
Trigger: GAGGAGATAAAGTGGGCGCCAGCGCGTCTGATGGCT...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTACCTGGCCGTGTTCTaGGCCTCTCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRYLAVF*ASLRRA
Trigger: TGCCCTCCTGAGAGAGGCTCAGAACACGGCCAGGTA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCCTCGCCTTCCAGGCTaGACCAGGGATTCTGGCGTG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIPRLPG*TRDSGV
Trigger: CACGCCAGAATCCCTGGTTCAGCCTGGAAGGCGAGG...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGCCAGGGATTCTGGCGTaGCAGCAGAGGAAAACACCT +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQPGILA*QQRKTP
Trigger: AGGTGTTTTCCTCTGCTGGCACGCCAGAATCCCTGG...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGCTTCCCCGTTCACTGTaGCCTCTCGGTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQLPRSL*PLGSLE
Trigger: CTCCAAAGAACCGAGAGGCCACAGTGAACGGGGAAG...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTACCTGGCCGTGTTCTaGGCCTCTCTCAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIYLAVF*ASLRRA
Trigger: TGCCCTCCTGAGAGAGGCTCAGAACACGGCCAGGTA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTGGCTTGCTGCTGAGTaGGCTTCTCTCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRWLAAE*ASLQMP
Trigger: AGGCATTTGGAGAGAAGCTCACTCAGCAGCAAGCCA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTCTCCAAATGCCTGCTaGCGCATCTGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRSPNAC*RICTTS
Trigger: TGATGTGGTGCAGATGCGGCAGCAGGCATTTGGAGA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTTCTCTCCAAATGCCTaGTGCCGCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRFSPNA*CRICTT
Trigger: TGTGGTGCAGATGCGGCAGCAGGCATTTGGAGAGAA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTGCCTCTGTGGCTGCTaGACTGGCTTGCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRCLCGC*TGLLLS
Trigger: ACTCAGCAGCAAGCCAGTGCAGCAGCCACAGAGGCA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTGGGTGCAGACACCTTaGTCCACATCCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRWVQTP*STSHSR
Trigger: GCGACTGTGGGATGTGGAGCAAGGTGTCTGCACCCA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp AAAGGGTCTAACAGAAAGAAGGTGTATTGCTGGAATGATGACCAGTGCCCAAGATGGGTGCAGACACCTTaGTCCACATCCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: KGSNRKKVYCWNDDQCPRWVQTP*STSHSR
Trigger: GCGACTGTGGGATGTGGAGCAAGGTGTCTGCACCCA...TCTTGGGCACTGGTCATCATTCCAGCAATACACCTTCTTTCTGTTAGACCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR TCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGACTTTCCATCGGGGCTaGAAGCTACACTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRTFHRG*KLHCRQ
Trigger: CTGTCTACAGTGTAGCTTTCAGCCCCGATGGAAAGT...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGACTTTCCATCGGGGCTaGAAGCTACACTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQTFHRG*KLHCRQ
Trigger: CTGTCTACAGTGTAGCTTTCAGCCCCGATGGAAAGT...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTGGGTGCAGACACCTTaGTCCACATCCCACAGTCGC +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIWVQTP*STSHSR
Trigger: GCGACTGTGGGATGTGGAGCAAGGTGTCTGCACCCA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACATCAATGCCACACTaGGGCCACTGTCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSTSMPH*GHCLGS
Trigger: ACTCCCCAGACAGTGGCCTCAGTGTGGCATTGATGT...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346432.3
ENST00000383032.6
CDS-3UTR TCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGCGAGTGAGAAAAACCTaGCTCCTGGAGATACCGATA +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRRVRKT*LLEIPI
Trigger: TATCGGTATCTCCAGGAGTCAGGTTTTTCTCACTCG...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGATCAAGGGCGGGGGCTaGATGAAAAGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRIKGGG*MKRKLL
Trigger: CAGCAGTTTCCTTTTCATTCAGCCCCCGCCCTTGAT...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCCAGGGATTCTGGCGTaGCAGCAGAGGAAAACACCT +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIPGILA*QQRKTP
Trigger: AGGTGTTTTCCTCTGCTGGCACGCCAGAATCCCTGG...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGGTGTTTGAACAGAGCTaGAACCCCATGCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRVFEQS*NPMHSR
Trigger: CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACAC...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGTTTGGAGGATTTTGCTaGGAAATAGCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQFGGFC*EIAAGV
Trigger: GACCCCAGCTGCTATTTCCCAGCAAAATCCTCCAAA...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTTTGGAGGATTTTGCTaGGAAATAGCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRFGGFC*EIAAGV
Trigger: GACCCCAGCTGCTATTTCCCAGCAAAATCCTCCAAA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCTTCCCCGTTCACTGTaGCCTCTCGGTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCILPRSL*PLGSLE
Trigger: CTCCAAAGAACCGAGAGGCCACAGTGAACGGGGAAG...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTGCTTCATGAGTGTGTaGGTGCAGACACCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRCFMSV*VQTPCS
Trigger: GGAGCAAGGTGTCTGCACCCACACACTCATGAAGCA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGGTCTAACAGAAAGAAGGTGTATTGCTGGAATGATGACCAGTGCCCAAGATTATGCTTCATGAGTGTGTaGGTGCAGACACCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSNRKKVYCWNDDQCPRLCFMSV*VQTPCS
Trigger: GGAGCAAGGTGTCTGCACCCACACACTCATGAAGCA...TAATCTTGGGCACTGGTCATCATTCCAGCAATACACCTTCTTTCTGTTAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAAGCCATCAGACGCGCTaGCGCCCACTTTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQSHQTR*RPLYLL
Trigger: GAGGAGATAAAGTGGGCGCCAGCGCGTCTGATGGCT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp TCTAACAGAAAGAAGGTGTATTGCTGGAATGATGACCAGTGCCCAAGATTATTCAGCCATCAGACGCGCTaGCGCCCACTTTATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNRKKVYCWNDDQCPRLFSHQTR*RPLYLL
Trigger: GAGGAGATAAAGTGGGCGCCAGCGCGTCTGATGGCT...GAATAATCTTGGGCACTGGTCATCATTCCAGCAATACACCTTCTTTCTGTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAACATCAATGCCACACTaGGGCCACTGTCTGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQTSMPH*GHCLGS
Trigger: ACTCCCCAGACAGTGGCCTCAGTGTGGCATTGATGT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000346432.3
ENST00000383032.6
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTGGCTTGCTGCTGAGTaGGCTTCTCTCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIWLAAE*ASLQMP
Trigger: AGGCATTTGGAGAGAAGCTCACTCAGCAGCAAGCCA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATAGGGCGGGGGCTGAATaGAAAGGAAACTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: THFGADRIVFEQSCNPMHRAGAE*KGNCCL
Trigger: CAAACAGCAGTTTCCTTTTCATTCAGCCCCCGCCCT...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTATCAAGGGCGGGGGCTaGATGAAAAGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIIKGGG*MKRKLL
Trigger: CAGCAGTTTCCTTTTCATTCAGCCCCCGCCCTTGAT...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CCAGTGCCCAAGATTATTCTTTTGATGGGATTCACATTAGCTCTCACACTGCTGACTTTCCATCGGGGCTaGAAGCTACACTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: PVPKIILLMGFTLALTLLTFHRG*KLHCRQ
Trigger: CTGTCTACAGTGTAGCTTTCAGCCCCGATGGAAAGT...CAGCAGTGTGAGAGCTAATGTGAATCCCATCAAAAGAATAATCTTGGGCACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTCTCCAAATGCCTGCTaGCGCATCTGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCISPNAC*RICTTS
Trigger: TGATGTGGTGCAGATGCGGCAGCAGGCATTTGGAGA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCATCTCCAAATGCCTGCTaGCGCATCTGCACCACATCA +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSSPNAC*RICTTS
Trigger: TGATGTGGTGCAGATGCGGCAGCAGGCATTTGGAGA...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTTCTCTCCAAATGCCTaGTGCCGCATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIFSPNA*CRICTT
Trigger: TGTGGTGCAGATGCGGCAGCAGGCATTTGGAGAGAA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACTTCCCCGTTCACTGTaGCCTCTCGGTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQLPRSL*PLGSLE
Trigger: CTCCAAAGAACCGAGAGGCCACAGTGAACGGGGAAG...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTGCTTCATGAGTGTGTaGGTGCAGACACCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCICFMSV*VQTPCS
Trigger: GGAGCAAGGTGTCTGCACCCACACACTCATGAAGCA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGACATATACACTCCTGTaGCCTGGGACAAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQTYTLL*PGTSWF
Trigger: AAACCAACTTGTCCCAGGCCACAGGAGTGTATATGT...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCTGTGCCATCCTTGTTaGTGCTTATCTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRLCHPC*CLSQPL
Trigger: TAGAGGCTGAGATAAGCATCAACAAGGATGGCACAG...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAATGGCTTGCTGCTGAGTaGGCTTCTCTCCAAATGCCT +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQWLAAE*ASLQMP
Trigger: AGGCATTTGGAGAGAAGCTCACTCAGCAGCAAGCCA...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAAGGGCGGGGGCTGAATaGAAAGGAAACTGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQRAGAE*KGNCCL
Trigger: CAAACAGCAGTTTCCTTTTCATTCAGCCCCCGCCCT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAATCAAGGGCGGGGGCTaGATGAAAAGGAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQIKGGG*MKRKLL
Trigger: CAGCAGTTTCCTTTTCATTCAGCCCCCGCCCTTGAT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTACTTTCCATCGGGGCTaGAAGCTACACTGTAGACAG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCITFHRG*KLHCRQ
Trigger: CTGTCTACAGTGTAGCTTTCAGCCCCGATGGAAAGT...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACTCACCTCATGGCGATaGGGTATTGATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSLTSWR*GIDEVG
Trigger: TCCAACTTCATCAATACCTCATCGCCATGAGGTGAG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACGAGTGAGAAAAACCTaGCTCCTGGAGATACCGATA +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSRVRKT*LLEIPI
Trigger: TATCGGTATCTCCAGGAGTCAGGTTTTTCTCACTCG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATCTGTGCCATCCTTGTTaGTGCTTATCTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: THFGADRIVFEQSCNPMHLCHPC*CLSQPL
Trigger: TAGAGGCTGAGATAAGCATCAACAAGGATGGCACAG...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAGTGTTTGAACAGAGCTaGAACCCCATGCATTCAAGG +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSVFEQS*NPMHSR
Trigger: CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACAC...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTAGTTTAGGTAACCAATaGCGACTAGAGAGCACTGCG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCISLGNQ*RLESTA
Trigger: CGCAGTGCTCTCTAGTCGCCATTGGTTACCTAAACT...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CCAGTGCCCAAGATTATTCTTTTGATGGGATTCACATTAGCTCTCACACTGCTGAAGAAGGTGTATTGCTaGAATGATGACCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PVPKIILLMGFTLALTLLKKVYC*NDDQCP
Trigger: TGGGCACTGGTCATCATTCCAGCAATACACCTTCTT...CAGCAGTGTGAGAGCTAATGTGAATCCCATCAAAAGAATAATCTTGGGCACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACTCACCTCATGGCGATaGGGTATTGATGAAGTTGGA +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQLTSWR*GIDEVG
Trigger: TCCAACTTCATCAATACCTCATCGCCATGAGGTGAG...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACGAGTGAGAAAAACCTaGCTCCTGGAGATACCGATA +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQRVRKT*LLEIPI
Trigger: TATCGGTATCTCCAGGAGTCAGGTTTTTCTCACTCG...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACTGTGCCATCCTTGTTaGTGCTTATCTCAGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQLCHPC*CLSQPL
Trigger: TAGAGGCTGAGATAAGCATCAACAAGGATGGCACAG...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGTCCATTGGCTTTGAGTaGTTATTGATTTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: ELIELCLNRAATPCIQGRSIGFE*LLISCA
Trigger: AGCACATGAAATCAATAATCACTCAAAGCCAATGGA...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTCTTTGGAGGATTTTaGTGGGAAATAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: THFGADRIVFEQSCNPMHFFGGF*WEIAAG
Trigger: CCCAGCTGCTATTTCCCAGCAAAATCCTCCAAAGAA...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTTCTTTGGAGGATTTTaGTGGGAAATAGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIFFGGF*WEIAAG
Trigger: CCCAGCTGCTATTTCCCAGCAAAATCCTCCAAAGAA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAATTTGGAGGATTTTGCTaGGAAATAGCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQFGGFC*EIAAGV
Trigger: GACCCCAGCTGCTATTTCCCAGCAAAATCCTCCAAA...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACATATACACTCCTGTaGCCTGGGACAAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSTYTLL*PGTSWF
Trigger: AAACCAACTTGTCCCAGGCCACAGGAGTGTATATGT...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCACTGTAGAATCAAATaGAGCACTTGCCAACATGAT +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRHCRIK*STCQHD
Trigger: ATCATGTTGGCAAGTGCTTCATTTGATTCTACAGTG...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp AAAGGGTCTAACAGAAAGAAGGTGTATTGCTGGAATGATGACCAGTGCCCAAGACACTGTAGAATCAAATaGAGCACTTGCCAACATGAT +
Preference number: 4 (lower is better)
Translates to: KGSNRKKVYCWNDDQCPRHCRIK*STCQHD
Trigger: ATCATGTTGGCAAGTGCTTCATTTGATTCTACAGTG...TCTTGGGCACTGGTCATCATTCCAGCAATACACCTTCTTTCTGTTAGACCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR TCA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTGGGAGAAACAGTTTATaGCAATCCACATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HILELIELCLNRAATPCIGRNSL*QSTSSP
Trigger: AGGACTTGATGTGGATTGTCATAAACTGTTTCTCCC...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAACATATACACTCCTGTaGCCTGGGACAAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQTYTLL*PGTSWF
Trigger: AAACCAACTTGTCCCAGGCCACAGGAGTGTATATGT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
3UTR CAA 72 bp CACAAGTCAAGTTCACACATTTTGGAGCTGATAGAATaGTGTTTGAACAGAGCTGCAACCCCATGCATTCAA +
Preference number: 4 (lower is better)
Translates to: HKSSSHILELIE*CLNRAATPCIQ
Trigger: TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGTGAACTTGACTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTCCATTGGCTTTGAGTaGTTATTGATTTCATGTGCT +
Preference number: 4 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRSIGFE*LLISCA
Trigger: AGCACATGAAATCAATAATCACTCAAAGCCAATGGA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACACTGTAGAATCAAATaGAGCACTTGCCAACATGAT +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSHCRIK*STCQHD
Trigger: ATCATGTTGGCAAGTGCTTCATTTGATTCTACAGTG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR TCA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGGAGAAACAGTTTATaGCAATCCACATCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILELIELCLNRAATPCIQGRNSL*QSTSSP
Trigger: AGGACTTGATGTGGATTGTCATAAACTGTTTCTCCC...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355162.6
ENST00000383032.6
CDS-3UTR GCA 90 bp CCCAAGATTATTCTTTTGATGGGATTCACATTAGCTCTCACACTGCTGACTGATAGAAAGAAGGTGTATTaGTGGAATGATGACCAGTGC +
Preference number: 4 (lower is better)
Translates to: PKIILLMGFTLALTLLTDRKKVY*WNDDQC
Trigger: GCACTGGTCATCATTCCAGCAATACACCTTCTTTCT...ATCAGTCAGCAGTGTGAGAGCTAATGTGAATCCCATCAAAAGAATAATCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651523.1
CDS-3UTR GCA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAATTATTGATTTCATGTaGTCCATTCTCTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSIIDFM*SILFPV
Trigger: AACGGGGAAGAGAATGGAGCACATGAAATCAATAAT...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGCGGAGCTGGGGTGTaGGCGGCTCCTCACTCCCGA +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSSGAGV*AAPHSR
Trigger: TCGGGAGTGAGGAGCCGCCAACACCCCAGCTCCGCT...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTAGCGGAGCTGGGGTGTaGGCGGCTCCTCACTCCCGA +
Preference number: 5 (lower is better)
Translates to: HILELIELCLNRAATPCISGAGV*AAPHSR
Trigger: TCGGGAGTGAGGAGCCGCCAACACCCCAGCTCCGCT...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAAGCGGAGCTGGGGTGTaGGCGGCTCCTCACTCCCGA +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQSGAGV*AAPHSR
Trigger: TCGGGAGTGAGGAGCCGCCAACACCCCAGCTCCGCT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTTGCCGCCTTTGCCATaGCTGATGCCTCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRLPPLP*LMPLWL
Trigger: CAGCCACAGAGGCATCAGCAATGGCAAAGGCGGCAA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACAGCTGGGGTCATGGTaGCCGCCTTTGCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSQLGSW*PPLPLL
Trigger: CAGCAATGGCAAAGGCGGCAACCATGACCCCAGCTG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATCAGCTGGGGTCATGGTaGCCGCCTTTGCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: THFGADRIVFEQSCNPMHQLGSW*PPLPLL
Trigger: CAGCAATGGCAAAGGCGGCAACCATGACCCCAGCTG...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCATTGCCGCCTTTGCCATaGCTGATGCCTCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSLPPLP*LMPLWL
Trigger: CAGCCACAGAGGCATCAGCAATGGCAAAGGCGGCAA...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGACTGTGCCATCCTTGTaGATGCTTATCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQTVPSL*MLISAS
Trigger: AGAGGCTGAGATAAGCATCAACAAGGATGGCACAGT...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp GGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGAACACTGTGCCATCCTaGTTGATGCTTATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: GADRIVFEQSCNPMHSRQNTVPS*LMLISA
Trigger: GGCTGAGATAAGCATCAACAAGGATGGCACAGTGTT...CTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAATTGCCGCCTTTGCCATaGCTGATGCCTCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQLPPLP*LMPLWL
Trigger: CAGCCACAGAGGCATCAGCAATGGCAAAGGCGGCAA...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp GAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGCAGGGTTCTTTGGAGGATTTaGCTGGGAAATAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: ELIELCLNRAATPCIQGRVLWRI*LGNSSW
Trigger: CCAGCTGCTATTTCCCAGCAAAATCCTCCAAAGAAC...CCTGCCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTCCCATTTGATGGCATaGACCTCGTTTGTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRSHLMA*TSFVCP
Trigger: GGGACACACAAACGAGGTCAATGCCATCAAATGGGA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGGTTCTTTGGAGGATTTaGCTGGGAAATAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRVLWRI*LGNSSW
Trigger: CCAGCTGCTATTTCCCAGCAAAATCCTCCAAAGAAC...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCCCATTTGATGGCATaGACCTCGTTTGTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: THFGADRIVFEQSCNPMHSHLMA*TSFVCP
Trigger: GGGACACACAAACGAGGTCAATGCCATCAAATGGGA...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTCCCATTTGATGGCATaGACCTCGTTTGTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: HILELIELCLNRAATPCISHLMA*TSFVCP
Trigger: GGGACACACAAACGAGGTCAATGCCATCAAATGGGA...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTACTGTGCCATCCTTGTaGATGCTTATCTCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: HILELIELCLNRAATPCITVPSL*MLISAS
Trigger: AGAGGCTGAGATAAGCATCAACAAGGATGGCACAGT...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAGTTCTTTGGAGGATTTaGCTGGGAAATAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSVLWRI*LGNSSW
Trigger: CCAGCTGCTATTTCCCAGCAAAATCCTCCAAAGAAC...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAAACACTGTGCCATCCTaGTTGATGCTTATCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQNTVPS*LMLISA
Trigger: GGCTGAGATAAGCATCAACAAGGATGGCACAGTGTT...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCTGATAGAATTGTGTTaGAACAGAGCTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: HILELIELCLNRAATPCILIELC*NRAATP
Trigger: TGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAG...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCACTGATAGAATTGTGTTaGAACAGAGCTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSLIELC*NRAATP
Trigger: TGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAG...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp TTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGGTTGGAGCTGATAGAATaGTGTTTGAACAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: FGADRIVFEQSCNPMHSRLELIE*CLNRAA
Trigger: TGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAA...CCTTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTGTGGCCTGGGACAAGTaGGTTTCAGAATATACTCTA +
Preference number: 5 (lower is better)
Translates to: HILELIELCLNRAATPCIVAWDK*VSEYTL
Trigger: TAGAGTATATTCTGAAACCAACTTGTCCCAGGCCAC...AATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATGTGGCCTGGGACAAGTaGGTTTCAGAATATACTCTA +
Preference number: 5 (lower is better)
Translates to: THFGADRIVFEQSCNPMHVAWDK*VSEYTL
Trigger: TAGAGTATATTCTGAAACCAACTTGTCCCAGGCCAC...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAGTGGCCTGGGACAAGTaGGTTTCAGAATATACTCTA +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSVAWDK*VSEYTL
Trigger: TAGAGTATATTCTGAAACCAACTTGTCCCAGGCCAC...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAACTGATAGAATTGTGTTaGAACAGAGCTGCAACCCCA +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQLIELC*NRAATP
Trigger: TGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAG...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTTGGAGCTGATAGAATaGTGTTTGAACAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: THFGADRIVFEQSCNPMHLELIE*CLNRAA
Trigger: TGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAA...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAGAGCATCCCAAATTATaGTTGTTTTGTCTACACCAG +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSEHPKL*LFCLHQ
Trigger: CTGGTGTAGACAAAACAACAATAATTTGGGATGCTC...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ACACATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATGAGCATCCCAAATTATaGTTGTTTTGTCTACACCAG +
Preference number: 5 (lower is better)
Translates to: THFGADRIVFEQSCNPMHEHPKL*LFCLHQ
Trigger: CTGGTGTAGACAAAACAACAATAATTTGGGATGCTC...ATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAATTGGAGCTGATAGAATaGTGTTTGAACAGAGCTGCA +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQLELIE*CLNRAA
Trigger: TGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAA...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp ATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCAAGAGCATCCCAAATTATaGTTGTTTTGTCTACACCAG +
Preference number: 5 (lower is better)
Translates to: ILELIELCLNRAATPCIQEHPKL*LFCLHQ
Trigger: CTGGTGTAGACAAAACAACAATAATTTGGGATGCTC...TTGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS-3UTR CAA 90 bp CATTTTGGAGCTGATAGAATTGTGTTTGAACAGAGCTGCAACCCCATGCATTCATCAAGTTCACACATTTaGGAGCTGATAGAATTGTGT +
Preference number: 5 (lower is better)
Translates to: HFGADRIVFEQSCNPMHSSSSHI*ELIELC
Trigger: ACACAATTCTATCAGCTCCAAAATGTGTGAACTTGA...TGAATGCATGGGGTTGCAGCTCTGTTCAAACACAATTCTATCAGCTCCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS GCA 72 bp GCCTCTCTCAGGAGGGCAGCCTGTGAGGCCCGGCCGTaGGGCGGCCGAAAAGAGCCCGGCGCACCGGAGCAG +
Preference number: 6 (lower is better)
Translates to: ASLRRAACEARP*GGRKEPGAPEQ
Trigger: CTGCTCCGGTGCGCCGGGCTCTTTTCGGCCGCCGCACGGCCGGGCCTCACAGGCTGCCCTCCTGAGAGAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6
CDS CCA 72 bp GAAAGGTCGCGGGTACTGGAAAGTTTAGGTAACCAATaGCGACTAGAGAGCACTGCGGTGGCGGCAGCAGCG +
Preference number: 6 (lower is better)
Translates to: ERSRVLESLGNQ*RLESTAVAAAA
Trigger: CGCTGCTGCCGCCACCGCAGTGCTCTCTAGTCGCCATTGGTTACCTAAACTTTCCAGTACCCGCGACCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000346432.3
ENST00000355162.6
ENST00000383032.6