RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBCK (Homo sapiens)

Ensembl gene IDs: ENSG00000145348

Ensembl transcript IDs: ENST00000273980.10, ENST00000361687.8, ENST00000394706.7, ENST00000394708.7, ENST00000467183.6, ENST00000503832.1, ENST00000505574.1, ENST00000506280.1, ENST00000506384.1, ENST00000506615.1, ENST00000507696.1, ENST00000508666.5, ENST00000509532.5, ENST00000509862.5, ENST00000510927.5, ENST00000511011.5, ENST00000514689.5

Found 655 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAGATGGCTTTGGAGGTTGAGCATGCT +
Preference number: 1 (lower is better)
Translates to: LEDLDTQQRNKVPNF*LHCCQKMALEVEHA
Trigger: AGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 90 bp ATAAGGTGCCGAACTTCTGCCTCCACTGCTGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCTGTAAGTAGCACTTTTAGGAGTCCA +
Preference number: 1 (lower is better)
Translates to: IRCRTSASTAVRRWL*RLSMLSVSSTFRSP
Trigger: TGGACTCCTAAAAGTGCTACTTACAGACAGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 90 bp AGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCTGTCAGAAGATaGCTTTGGAGGTTGAGCATGCTGTCTGTAAGTAGCACTTTTAGG +
Preference number: 1 (lower is better)
Translates to: REIRCRTSASTAVRR*LWRLSMLSVSSTFR
Trigger: CCTAAAAGTGCTACTTACAGACAGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 90 bp AGCTTTGGTTTACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTaGCCTGTCACTGTGAGCTCACACAAGTCAATCAGGTCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: SFGLLDFVFLLGVLK*PVTVSSHKSIRSSA
Trigger: AGCAGAGGACCTGATTGACTTGTGTGAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 90 bp ATACACTCATTAAAGCCATTAGCCAAAAGCCGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATACAGAATGGGAAAGAGGAATTCCCA +
Preference number: 1 (lower is better)
Translates to: IHSLKPLAKSRSRSC*RIATPIQNGKEEFP
Trigger: TGGGAATTCCTCTTTCCCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCGGCTTTTGGCTAATGGCTTTAATGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 90 bp CCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTaGAATGTGACCACGAATAAAGTCTTCACTATTCCGGATGTCAAC +
Preference number: 1 (lower is better)
Translates to: PFCSEGSTEWNVDAS*NVTTNKVFTIPDVN
Trigger: GTTGACATCCGGAATAGTGAAGACTTTATTCGTGGTCACATTTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 90 bp AGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTaGCGGGAAGTTATGTCTTGTCATTTCATGGAGCGGAGTTCCTTG +
Preference number: 1 (lower is better)
Translates to: RITRPMTISSVASLI*REVMSCHFMERSSL
Trigger: CAAGGAACTCCGCTCCATGAAATGACAAGACATAACTTCCCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CCA 90 bp ACGAATAAAGTCTTCACTATTCCGGATGTCAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCC +
Preference number: 1 (lower is better)
Translates to: TNKVFTIPDVNHQEL*FTGLCFLAGCFEVA
Trigger: GGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTGACATCCGGAATAGTGAAGACTTTATTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR GCA 90 bp CACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTaGATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGC +
Preference number: 1 (lower is better)
Translates to: HFNLSICRNWSVFIN*IVLGMNSSLNSQKS
Trigger: GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
3UTR TCA 90 bp AAGATCCAAAGCTATGTCTTCTATTCCTATATGTATTCCAAAACCTaGGTTCTTGGGGCTTATATTGATACTGGGTATCCCACGGGCCTA +
Preference number: 1 (lower is better)
Translates to: KIQSYVFYSYMYSKT*VLGAYIDTGYPTGL
Trigger: TAGGCCCGTGGGATACCCAGTATCAATATAAGCCCCAAGAACTCAGGTTTTGGAATACATATAGGAATAGAAGACATAGCTTTGGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CCA 90 bp CATCTTTCAATCTATTTCTTAGCTGGCATAACGACAATGTCACAGTaGTATCATCTAAAAGCGAGCTTCTATCTCGACCTTGTCCAAAGC +
Preference number: 1 (lower is better)
Translates to: HLSIYFLAGITTMSQ*YHLKASFYLDLVQS
Trigger: GCTTTGGACAAGGTCGAGATAGAAGCTCGCTTTTAGATGATACCACTGTGACATTGTCGTTATGCCAGCTAAGAAATAGATTGAAAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 90 bp GAGATCTGGAATGAAACCAATCTCATTGAGATGATTACTCAGCTCTaGATCATGAAATGCAATCATCTGAGAGAAGACAGTCAGATACTC +
Preference number: 1 (lower is better)
Translates to: EIWNETNLIEMITQL*IMKCNHLREDSQIL
Trigger: GAGTATCTGACTGTCTTCTCTCAGATGATTGCATTTCATGATCCAGAGCTGAGTAATCATCTCAATGAGATTGGTTTCATTCCAGATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR GCA 90 bp TGGTTTCTAAATTTCATTTTTCTGGGAGTAAGTATTACCACTTTCTaGAATGGGATAAACTCCACTTCCTATACACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: WFLNFIFLGVSITTF*NGINSTSYTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACTTACTCCCAGAAAAATGAAATTTAGAAACCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CCA 90 bp ATATGTACTCTCTTCTTCCCACACAGTAATAAGAATGTTTTTAGCTaGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCT +
Preference number: 1 (lower is better)
Translates to: ICTLFFPHSNKNVFS*GNDQPPKDSISSFP
Trigger: AGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGCTAAAAACATTCTTATTACTGTGTGGGAAGAAGAGAGTACATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR TCA 90 bp AGTCACCGTAGAAGCTATACAGATCACAATCTATCTATAGAACACTaGATATGCCAAGATCCAAGTTTAGTTTTCATGTTACAAGCACCT +
Preference number: 1 (lower is better)
Translates to: SHRRSYTDHNLSIEH*ICQDPSLVFMLQAP
Trigger: AGGTGCTTGTAACATGAAAACTAAACTTGGATCTTGGCATATTCAGTGTTCTATAGATAGATTGTGATCTGTATAGCTTCTACGGTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTCTGGTCTCAAACTCCTaGCCTCGGCCTCCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GSWDNWILICKNEPGPLTLVSNS*PRPPRE
Trigger: TTCCCTGGGAGGCCGAGGTCAGGAGTTTGAGACCAG...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCCTGCCTCAGCCTCCTaGGTAGCTGGGACCGCAGAC +
Preference number: 2 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSPASAS*VAGTAD
Trigger: GTCTGCGGTCCCAGCTACTCAGGAGGCTGAGGCAGG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTTTGAGATGGCAGGGTaGGCCCTGTTGCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGFEMAG*ALLPRL
Trigger: CAGCCTGGGCAACAGGGCTCACCCTGCCATCTCAAA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTTTGAGATGGCAGGGTaGGCCCTGTTGCCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRFEMAG*ALLPRL
Trigger: CAGCCTGGGCAACAGGGCTCACCCTGCCATCTCAAA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAGCCTCCTGAGTAGCTaGGACCGCAGACGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGSLLSS*DRRRVP
Trigger: TGGCACACGTCTGCGGTCCCAGCTACTCAGGAGGCT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCCCTGTTGCCCAGGCTaGGGTACAGTGGCCCTATCA +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRPCCPG*GTVALS
Trigger: TGATAGGGCCACTGTACCCCAGCCTGGGCAACAGGG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACAGGCTGGGGTACAGTaGCCCTATCATGGCTCATTG +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSQAGVQ*PYHGSL
Trigger: CAATGAGCCATGATAGGGCCACTGTACCCCAGCCTG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp ACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 2 (lower is better)
Translates to: TGLCFLAGCFEVACHCELASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...GAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAGCCTCCTGAGTAGCTaGGACCGCAGACGTGTGCCA +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHSLLSS*DRRRVP
Trigger: TGGCACACGTCTGCGGTCCCAGCTACTCAGGAGGCT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATCCCTGTTGCCCAGGCTaGGGTACAGTGGCCCTATCA +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHPCCPG*GTVALS
Trigger: TGATAGGGCCACTGTACCCCAGCCTGGGCAACAGGG...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp ATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCAGCCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: INCIVLGMNSSLNSQKSSLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...GCTGCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: EDLDTQQRNKVPNFCLHCTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...GCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR GCA 90 bp AGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAAAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 2 (lower is better)
Translates to: SSPSAVKAALNGMLMLPENFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...TTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CAA 90 bp TTGGGGAGTGTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAGTCACCTCCAGCCAAACACCAAAGG +
Preference number: 2 (lower is better)
Translates to: LGSVQIGGLDRMISL*TSSFSKSPPAKHQR
Trigger: CCTTTGGTGTTTGGCTGGAGGTGACTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCACACTCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CAA 90 bp TGCCGAACTTCTGCCTCCACTGCTGTCAGAAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGTAGCACTTTTAGGAGTCCAACAAAA +
Preference number: 2 (lower is better)
Translates to: CRTSASTAVRRWLWR*SMLSVSSTFRSPTK
Trigger: TTTTGTTGGACTCCTAAAAGTGCTACTTACAGACAGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR TCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACTCATATGCAAGAATaGACCTGGACCCCTCACTCC +
Preference number: 2 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTHMQE*TWTPHS
Trigger: GGAGTGAGGGGTCCAGGTTCATTCTTGCATATGAGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCACTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTCTCCCAGGCTGGAGTaGAGTGGAGCGATCTCGGCT +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKSPRLE*SGAISA
Trigger: AGCCGAGATCGCTCCACTGCACTCCAGCCTGGGAGA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAGGGTCCTGGGACAACTaGATACTCATATGCAAGAAT +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSGSWDN*ILICKN
Trigger: ATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAAGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 2 (lower is better)
Translates to: SSPSAVKAALNGMLMLPEECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...TTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTGTGATGGTAGAAGCTaGGGAGCCATTTTCATCCAT +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRCDGRS*GAIFIH
Trigger: ATGGATGAAAATGGCTCCTCAGCTTCTACCATCACA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp ATGCCCCACGATGACAATGACCTTCCCTTTGAAGTTCTGGAGCATAGCAGTGTACTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: MPHDDNDLPFEVLEHSSVLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...TACACTGCTATGCTCCAGAACTTCAAAGGGAAGGTCATTGTCATCGTGGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR GCA 90 bp ACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCTTTGAAAATTCCCTGTaGAATTACCTCAGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: TGLCFLAGCFEVACHCELFENSL*NYLRGQ
Trigger: TTGGCCCCTGAGGTAATTGCACAGGGAATTTTCAAA...GAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGGGGTCCTGGGACAACTaGATACTCATATGCAAGAAT +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRGSWDN*ILICKN
Trigger: ATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAGTATGTATATCTGTGTaGGCTGGTGGTGGTACTTAT +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSVCISV*AGGGTY
Trigger: ATAAGTACCACCACCAGCCCACACAGATATACATAC...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 90 bp CTCGTGACAAACTTTACGGAAATGCAACAATCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGCT +
Preference number: 2 (lower is better)
Translates to: LVTNFTEMQQSGHLV*SESGVDMKNCAVGA
Trigger: AGCACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCCAGATTGTTGCATTTCCGTAAAGTTTGTCACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR CAA 90 bp ATTTGGCGGGAAGTTATGTCTTGTCATTTCATGGAGCGGAGTTCCTaGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACC +
Preference number: 2 (lower is better)
Translates to: IWREVMSCHFMERSS*RRSLHKEVLIRTPT
Trigger: GGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCATGAAATGACAAGACATAACTTCCCGCCAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 90 bp AAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTaGGCGGGAAGTTATGTCTTGTCATTTCATGGAGCGGAGTTCCTT +
Preference number: 2 (lower is better)
Translates to: KNNQANDNLLCSFPN*AGSYVLSFHGAEFL
Trigger: AAGGAACTCCGCTCCATGAAATGACAAGACATAACTTCCCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp TATTTGAGGAGATGGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATTAATGCCAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 2 (lower is better)
Translates to: YLRRWDGEEACWLYFINAKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR TCA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTCGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 2 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGAAGCCAGAGAAGACTaGAGGAGGTACACTGTTGTT +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHEARED*RRYTVV
Trigger: AACAACAGTGTACCTCCTCCAGTCTTCTCTGGCTTC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 90 bp TCACCATCCTCAAAGAGAAAATTGGGGAGTGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTGTTGACAAGCTCTTTCTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: SPSSKRKLGSVQIGG*DRMISLLTSSFSKS
Trigger: TGACTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGATGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 2 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 2 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTTGTGATGGTAGAAGCTaGGGAGCCATTTTCATCCAT +
Preference number: 2 (lower is better)
Translates to: AGEMINHPKTLFPVFLKACDGRS*GAIFIH
Trigger: ATGGATGAAAATGGCTCCTCAGCTTCTACCATCACA...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTAGACGTGTGCCACTATaGCCAGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSRRVPL*PANFYI
Trigger: AATATAAAAATTAGCTGGTCATAGTGGCACACGTCT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTGTGTGGGCTGGTGGTaGTACTTATGGCATTCCAGG +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKCVGWW*YLWHSR
Trigger: CCTGGAATGCCATAAGTACCACCACCAGCCCACACA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGCCATTTTCATCCATaGGATGGATGCCACATATTG +
Preference number: 2 (lower is better)
Translates to: AGEMINHPKTLFPVFLKASHFHP*DGCHIL
Trigger: CAATATGTGGCATCCATCTCATGGATGAAAATGGCT...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAATCATGACAGAGGGTTaGTACTATTATCTTCTTACA +
Preference number: 2 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSIMTEG*YYYLLT
Trigger: TGTAAGAAGATAATAGTAGCAACCCTCTGTCATGAT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCAGAATGATCATCAATaGTGCATTCTGATTATGAAC +
Preference number: 2 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSQNDHQ*CILIMN
Trigger: GTTCATAATCAGAATGCACCATTGATGATCATTCTG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp ATGCCCCACGATGACAATGACCTTCCCTTTGAAGTTCTGGAGCATAGCAGTGTATCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 2 (lower is better)
Translates to: MPHDDNDLPFEVLEHSSVSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...TACACTGCTATGCTCCAGAACTTCAAAGGGAAGGTCATTGTCATCGTGGGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR GCA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCTTCTCTTTGGGAAAATaGAGGCTCTTTGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCFSLGK*RLFVGV
Trigger: AACACCTACAAAGAGCCTGCATTTTCCCAAAGAGAA...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp AGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: RRMEGKALIQKIYHSFRKCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...CTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGATTTTAAAAACAATGTaGCAGAGGCAGAGGTTGTTA +
Preference number: 2 (lower is better)
Translates to: SRITRPMTISSVASLIWRILKTM*QRQRLL
Trigger: TAACAACCTCTGCCTCTGCCACATTGTTTTTAAAAT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGAAGAGGGTAGACAATaGCCCAAAAACAATGTTAGT +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHEEGRQ*PKNNVS
Trigger: ACTAACATTGTTTTTGGGCCATTGTCTACCCTCTTC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 2 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAGGTTTGTAAAGCAATaGGAGAAGGTAATGAGTTCT +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHRFVKQ*EKVMSS
Trigger: AGAACTCATTACCTTCTCTCATTGCTTTACAAACCT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAGACGTGTGCCACTATaGCCAGCTAATTTTTATATT +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHRRVPL*PANFYI
Trigger: AATATAAAAATTAGCTGGTCATAGTGGCACACGTCT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGTATTACCACTTTCTaGAATGGGATAAACTCCACT +
Preference number: 2 (lower is better)
Translates to: AGEMINHPKTLFPVFLKASITTF*NGINST
Trigger: AGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACT...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAGTATTACCACTTTCTaGAATGGGATAAACTCCACT +
Preference number: 2 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHSITTF*NGINST
Trigger: AGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCATGCACCCAAGTTCTaGCCAATGATATGTAAGCAG +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKHAPKF*PMICKQ
Trigger: CTGCTTACATATCATTGGCCAGAACTTGGGTGCATG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTATATCTGTGTGGGCTaGTGGTGGTACTTATGGCAT +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKYICVG*WWYLWH
Trigger: ATGCCATAAGTACCACCACCAGCCCACACAGATATA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp CTGGTGATGATAACAGTTCATCGTACTGATGACAGCGAGGAATATCCACTTCAAAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 2 (lower is better)
Translates to: LVMITVHRTDDSEEYPLQSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...TTGAAGTGGATATTCCTCGCTGTCATCAGTACGATGAACTGTTATCATCACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
3UTR-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGAGGTTTGTAAAGCAATaGGAGAAGGTAATGAGTTCT +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKRFVKQ*EKVMSS
Trigger: AGAACTCATTACCTTCTCTCATTGCTTTACAAACCT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTTTTTGGTAACTATTTaGAGGAGGAAAGCACAGGAA +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKFLVTI*RRKAQE
Trigger: TTCCTGTGCTTTCCTCCTCCAAATAGTTACCAAAAA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCTTATTGAAATGTTCTaGCTAGGCAGTCTTAACATT +
Preference number: 2 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKLIEMF*LGSLNI
Trigger: AATGTTAAGACTGCCTAGGCAGAACATTTCAATAAG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCAGAATGATCATCAATaGTGCATTCTGATTATGAAC +
Preference number: 2 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALQNDHQ*CILIMN
Trigger: GTTCATAATCAGAATGCACCATTGATGATCATTCTG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR GCA 72 bp CATAGCAGTGTAAGGGCCCTGGGTAAGCTCCCCTTCTaGAGTGAAGGCAGCACTGAATGGAATGTTGATGCT +
Preference number: 3 (lower is better)
Translates to: HSSVRALGKLPF*SEGSTEWNVDA
Trigger: AGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCTTACCCAGGGCCCTTACACTGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 72 bp AAGCTAGGTGTGGCCATGCACCCAAGTTCTGGCCAATaGTATGTAAGCAGAGGTAGTGTGCGCAACTTCTGG +
Preference number: 3 (lower is better)
Translates to: KLGVAMHPSSGQ*YVSRGSVRNFW
Trigger: CCAGAAGTTGCGCACACTACCTCTGCTTACATATCATTGGCCAGAACTTGGGTGCATGGCCACACCTAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR GCA 72 bp CAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTGGAGGTTGAGCATGCT +
Preference number: 3 (lower is better)
Translates to: QQRNKVPNFCLH*CQKMALEVEHA
Trigger: AGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR GCA 72 bp CTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAGATGGCTTTGGAGGTT +
Preference number: 3 (lower is better)
Translates to: LDTQQRNKVPNF*LHCCQKMALEV
Trigger: AACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 72 bp GAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGGCAGTCACACTCTTGG +
Preference number: 3 (lower is better)
Translates to: EWRGYEELCCWC*CHTKFWQSHSW
Trigger: CCAAGAGTGTGACTGCCAAAACTTAGTGTGGCATCAGCACCAACAGCACAGTTCTTCATATCCACGCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR CCA 72 bp GGGCTCTTAGTGCAGCATGGGGAAGCCAGAGAAGACTaGAGGAGGTACACTGTTGTTGCTAGATTATCAAGA +
Preference number: 3 (lower is better)
Translates to: GLLVQHGEARED*RRYTVVARLSR
Trigger: TCTTGATAATCTAGCAACAACAGTGTACCTCCTCCAGTCTTCTCTGGCTTCCCCATGCTGCACTAAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR GCA 72 bp AAACAGGAGGGGTCCTGGGACAACTGGATACTCATATaGAAGAATGAACCTGGACCCCTCACTCCATATACA +
Preference number: 3 (lower is better)
Translates to: KQEGSWDNWILI*KNEPGPLTPYT
Trigger: TGTATATGGAGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCCCTCCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR GCA 72 bp ATTAGCCAAAAGCCGGTCCCGCAGCTGCTGAAGAATTaGTACTCCAATACAGAATGGGAAAGAGGAATTCCC +
Preference number: 3 (lower is better)
Translates to: ISQKPVPQLLKN*YSNTEWERGIP
Trigger: GGGAATTCCTCTTTCCCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCGGCTTTTGGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 72 bp CGAACTTCTGCCTCCACTGCTGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCTGTAAGTAGCACTTTT +
Preference number: 3 (lower is better)
Translates to: RTSASTAVRRWL*RLSMLSVSSTF
Trigger: AAAAGTGCTACTTACAGACAGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR CAA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 3 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CAA 90 bp ATGCCCCACGATGACAATGACCTTCCCTTTGAAGTTCTGGAGCATAGCAGTGTACAACCACCAGGAGCTTaGGTTTACTGGACTTTGTTT +
Preference number: 3 (lower is better)
Translates to: MPHDDNDLPFEVLEHSSVQPPGA*VYWTLF
Trigger: AAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTG...TACACTGCTATGCTCCAGAACTTCAAAGGGAAGGTCATTGTCATCGTGGGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 72 bp AGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTaGCGGGAAGTTATGTCTTGTCATTTCATGGAGCGG +
Preference number: 3 (lower is better)
Translates to: RPMTISSVASLI*REVMSCHFMER
Trigger: CCGCTCCATGAAATGACAAGACATAACTTCCCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCATCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CAA 90 bp GTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTTGACAAGCTCTTTCTCCTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: VQIGGLDRMISLLTSSFSSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...GGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTGTCAGCTGAATTTCTaGGGCTTTATGTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGCQLNF*GFMWQC
Trigger: ACACTGCCACATAAAGCCCAAGAAATTCAGCTGACA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATTAAGCCATTCGTCTTaGCTACAGGAACTGACCAAA +
Preference number: 3 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSLSHSS*LQELTK
Trigger: TTTGGTCAGTTCCTGTAGCAAAGACGAATGGCTTAA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR TCA 72 bp CTCTTCCTTCTAGATAGCAGATGTGATGGTAGAAGCTaGGGAGCCATTTTCATCCATGAGATGGATGCCACA +
Preference number: 3 (lower is better)
Translates to: LFLLDSRCDGRS*GAIFIHEMDAT
Trigger: TGTGGCATCCATCTCATGGATGAAAATGGCTCCTCAGCTTCTACCATCACATCTGCTATCTAGAAGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 3 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSNAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CAA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGGCCCAGAAAGCTGAATaGAGGCTCTTATTGAAATGT +
Preference number: 3 (lower is better)
Translates to: SRITRPMTISSVASLIWRAQKAE*RLLLKC
Trigger: ACATTTCAATAAGAGCCTCAATTCAGCTTTCTGGGC...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR TCA 72 bp TACGGAAATGCAACAATCTGGACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAAGAACTGTGCTGTTGG +
Preference number: 3 (lower is better)
Translates to: YGNATIWTSSFV*EWRGYEELCCW
Trigger: CCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCCAGATTGTTGCATTTCCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR CCA 72 bp GTCTTCACTATTCCGGATGTCAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTTCTTGCTGGGTGTTTT +
Preference number: 3 (lower is better)
Translates to: VFTIPDVNHQEL*FTGLCFLAGCF
Trigger: AAAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTGACATCCGGAATAGTGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CCA 72 bp GGCAGTCACACTCTTGGTTCTTCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATT +
Preference number: 3 (lower is better)
Translates to: GSHTLGSSYLRR*DGEEACWLYFI
Trigger: AATAAAATAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTCAAATATGAAGAACCAAGAGTGTGACTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 72 bp GGTGATACCTCACTGAATACTTTGTCCTTCATTAATTaGTCTGGGGTTGGCCTCTTAGAAGGATGGAAGGTA +
Preference number: 3 (lower is better)
Translates to: GDTSLNTLSFIN*SGVGLLEGWKV
Trigger: TACCTTCCATCCTTCTAAGAGGCCAACCCCAGATCAATTAATGAAGGACAAAGTATTCAGTGAGGTATCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 72 bp GCAGCACTGAATGGAATGTTGATGCTTCCTGAAATGTaGCCACGAATAAAGTCTTCACTATTCCGGATGTCA +
Preference number: 3 (lower is better)
Translates to: AALNGMLMLPEM*PRIKSSLFRMS
Trigger: TGACATCCGGAATAGTGAAGACTTTATTCGTGGTCACATTTCAGGAAGCATCAACATTCCATTCAGTGCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR TCA 72 bp AGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTaGAATGTGACCACGAATAAAGTCTTCACTATTCCG +
Preference number: 3 (lower is better)
Translates to: SEGSTEWNVDAS*NVTTNKVFTIP
Trigger: CGGAATAGTGAAGACTTTATTCGTGGTCACATTTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGCTCTTTGTAGGTGTTaGTTCTTCTCTACATACATT +
Preference number: 3 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGALCRC*FFSTYI
Trigger: AATGTATGTAGAGAAGAACAAACACCTACAAAGAGC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR GCA 72 bp TTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTaGATCGTACTTGGCATGAATAGCTCCCTCAACTCC +
Preference number: 3 (lower is better)
Translates to: LSICRNWSVFIN*IVLGMNSSLNS
Trigger: GGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
3UTR-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGATGGAGCGGAGTTCCTaGAGACGGTCACTTCATAAA +
Preference number: 3 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKMERSS*RRSLHK
Trigger: TTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCAT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR-3UTR CAA 90 bp AATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 3 (lower is better)
Translates to: NWSVFINCIVLGMNSSLNNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...GTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTTAAGCCATTCGTCTTaGCTACAGGAACTGACCAAA +
Preference number: 3 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKLSHSS*LQELTK
Trigger: TTTGGTCAGTTCCTGTAGCAAAGACGAATGGCTTAA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR GCA 72 bp CCTCGGCCTCCCAAAGTGAATAAGATTCTTTTGAGATaGTATAGAATCCTTTTGATACTAATTCCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: PRPPKVNKILLR*YRILLILIPKG
Trigger: TCCTTTGGGAATTAGTATCAAAAGGATTCTATAGCATCTCAAAAGAATCTTATTCACTTTGGGAGGCCGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CCA 72 bp AATGAAACCAATCTCATTGAGATGATTACTCAGCTCTaGATCATGAAATGCAATCATCTGAGAGAAGACAGT +
Preference number: 3 (lower is better)
Translates to: NETNLIEMITQL*IMKCNHLREDS
Trigger: ACTGTCTTCTCTCAGATGATTGCATTTCATGATCCAGAGCTGAGTAATCATCTCAATGAGATTGGTTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR GCA 72 bp AATTTCATTTTTCTGGGAGTAAGTATTACCACTTTCTaGAATGGGATAAACTCCACTTCCTATACACACACA +
Preference number: 3 (lower is better)
Translates to: NFIFLGVSITTF*NGINSTSYTHT
Trigger: TGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACTTACTCCCAGAAAAATGAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACCTGCCTCAGCCTCCTaGGTAGCTGGGACCGCAGAC +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSPASAS*VAGTAD
Trigger: GTCTGCGGTCCCAGCTACTCAGGAGGCTGAGGCAGG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCCAGCGCTGTCGCTGTaGCTGCTGCTGCCGCTACGG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGPALSL*LLLPLR
Trigger: CCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp ATGCCCCACGATGACAATGACCTTCCCTTTGAAGTTCTGGAGCATAGCAGTGTACGGGAGCTCAGACGCTaGCCTTTGCTCGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: MPHDDNDLPFEVLEHSSVRELRR*PLLASQ
Trigger: TTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCG...TACACTGCTATGCTCCAGAACTTCAAAGGGAAGGTCATTGTCATCGTGGGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTTTTGAGATGGCAGGGTaGGCCCTGTTGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSFEMAG*ALLPRL
Trigger: CAGCCTGGGCAACAGGGCTCACCCTGCCATCTCAAA...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTATGGTCTCGATCTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTMVSIS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGATCGAGACCAT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTTCTCCCAGGCTGGAGTaGAGTGGAGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPSPRLE*SGAISA
Trigger: AGCCGAGATCGCTCCACTGCACTCCAGCCTGGGAGA...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCGGGAGCTCAGACGCTaGCCTTTGCTCGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGRELRR*PLLASQ
Trigger: TTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGCGGGAGCTCAGACGCTaGCCTTTGCTCGCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKRELRR*PLLASQ
Trigger: TTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCG...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS-3UTR GCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCGCTGTCGCTGTGGCTaGTGCTGCCGCTACGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRRCRCG*CCRYGL
Trigger: TAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAGCCTCCTGAGTAGCTaGGACCGCAGACGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSSLLSS*DRRRVP
Trigger: TGGCACACGTCTGCGGTCCCAGCTACTCAGGAGGCT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTCCCTGTTGCCCAGGCTaGGGTACAGTGGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPPCCPG*GTVALS
Trigger: TGATAGGGCCACTGTACCCCAGCCTGGGCAACAGGG...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCCAGCGCTGTCGCTGTaGCTGCTGCTGCCGCTACGG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGPALSL*LLLPLR
Trigger: CCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATCCAGCGCTGTCGCTGTaGCTGCTGCTGCCGCTACGG +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHPALSL*LLLPLR
Trigger: CCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGG...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS-3UTR TCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTCCTGCCTCAGCCTCCTaGGTAGCTGGGACCGCAGAC +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAPASAS*VAGTAD
Trigger: GTCTGCGGTCCCAGCTACTCAGGAGGCTGAGGCAGG...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCCGCTGTCGCTGTGGCTaGTGCTGCCGCTACGGCTTA +
Preference number: 4 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSRCRCG*CCRYGL
Trigger: TAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCG...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPKRGHS*NAGSSD
Trigger: GTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGTCCTCCGCTTCATGTaGGTGACGTCGTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHVLRFM*VTSWRV
Trigger: GACCCGCCACGACGTCACTCACATGAAGCGGAGGAC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTACTCATATGCAAGAATaGACCTGGACCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTTHMQE*TWTPHS
Trigger: GGAGTGAGGGGTCCAGGTTCATTCTTGCATATGAGT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTATGGTCTCGATCTCCTaGCCTTGTGATCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPMVSIS*PCDLPA
Trigger: GGCAGGCAGATCACAAGGTCAGGAGATCGAGACCAT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCGCTGTCGCTGTGGCTaGTGCTGCCGCTACGGCTTA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRCRCG*CCRYGL
Trigger: TAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGRGAQA*PSPNTD
Trigger: ATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKRGAQA*PSPNTD
Trigger: ATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCG...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTCCGCTTCATGTGAGTaGCGTCGTGGCGGGTCACTC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHSASCE*RRGGSL
Trigger: GAGTGACCCGCCACGACGTCACTCACATGAAGCGGA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATA +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSRSRSC*RIATPI
Trigger: TATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGGAGGAGATGGGATGGTaGGGAGGCCTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKEEMGW*GGLLAL
Trigger: TAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTC...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AGAGCAGCCCAGGTTAAACCTCTCATAAGAGGAGGAATGTCAACTCTTGCTTCTGAGGAGATGGGATGGTaGGGAGGCCTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RAAQVKPLIRGGMSTLASEEMGW*GGLLAL
Trigger: TAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTC...AGAAGCAAGAGTTGACATTCCTCCTCTTATGAGAGGTTTAACCTGGGCTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTTGAGATGGCAGGGTaGGCCCTGTTGCCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGFEMAG*ALLPRL
Trigger: CAGCCTGGGCAACAGGGCTCACCCTGCCATCTCAAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPKVPNF*LHCCQK
Trigger: CTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAGGTAAGCTCCCCTTCTaGAGTGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSGKLPF*SEGSTE
Trigger: TTCAGTGCTGCCTTCACTGCAGAAGGGGAGCTTACC...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTGGTAAGCTCCCCTTCTaGAGTGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPGKLPF*SEGSTE
Trigger: TTCAGTGCTGCCTTCACTGCAGAAGGGGAGCTTACC...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCCTTCACAAGGTGAGCTaGAAACTCAGCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: EDLDTQQRNKVPNFCLHCLHKVS*KLSCVF
Trigger: AAACACACAGCTGAGTTTGCAGCTCACCTTGTGAAG...GCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTTCTCCCAGGCTGGAGTaGAGTGGAGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKASPRLE*SGAISA
Trigger: AGCCGAGATCGCTCCACTGCACTCCAGCCTGGGAGA...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSDAAL*SRAKSA
Trigger: GGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTSYLRR*DGEEAC
Trigger: ACAGGCCTCCTCACCATCCCATCTCCTCAAATATGA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAACCAGCGCTGTCGCTGTaGCTGCTGCTGCCGCTACGG +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKPALSL*LLLPLR
Trigger: CCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGG...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGRSRSC*RIATPI
Trigger: TATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTTCGGGGATCGCCGATTaGGATCGTAGGGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKASGIAD*DRRGLP
Trigger: AGGAAGACCCCTACGATCGCAATCGGCGATCCCCGA...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR GCA 90 bp GAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCCAGCTGCTGAAGAATTaGTACTCCAATACAGAATGG +
Preference number: 4 (lower is better)
Translates to: EDLDTQQRNKVPNFCLHCQLLKN*YSNTEW
Trigger: CCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTG...GCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRKVPNF*LHCCQK
Trigger: CTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAGTGTGTTTTGCCACATaGCCCACGATGACAATGACC +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSVCFAT*PTMTMT
Trigger: GGTCATTGTCATCGTGGGGCATGTGGCAAAACACAC...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCTCAGCTGTGTGTTTTaGCACATGCCCCACGATGAC +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRLSCVF*HMPHDD
Trigger: GTCATCGTGGGGCATGTGGCAAAACACACAGCTGAG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCTCAGCTGTGTGTTTTaGCACATGCCCCACGATGAC +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLSCVF*HMPHDD
Trigger: GTCATCGTGGGGCATGTGGCAAAACACACAGCTGAG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCGCTGTCGCTGTGGCTaGTGCTGCCGCTACGGCTTA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNRCRCG*CCRYGL
Trigger: TAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTGGCAGAGTCTGGGATaGGTGATGGTTTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTWQSLG*VMVLRI
Trigger: AATCCTTAAAACCATCACCCATCCCAGACTCTGCCA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAAACTGCTGTCAGAAGATaGCTTTGGAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: SSPSAVKAALNGMLMLPETAVRR*LWRLSM
Trigger: CATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGT...TTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAATCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSPSAVKAALNGMLMLPESYLRR*DGEEAC
Trigger: ACAGGCCTCCTCACCATCCCATCTCCTCAAATATGA...TTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTGGGTCCTGGGACAACTaGATACTCATATGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTGSWDN*ILICKN
Trigger: ATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAATCTGTGTGGGCTGGTaGTGGTACTTATGGCATTCC +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSICVGW*WYLWHS
Trigger: GGAATGCCATAAGTACCACCACCAGCCCACACAGAT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRGAQA*PSPNTD
Trigger: ATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TATTTGAGGAGATGGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATTAATGCCCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGAT +
Preference number: 4 (lower is better)
Translates to: YLRRWDGEEACWLYFINARGAQA*PSPNTD
Trigger: ATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCG...GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CAA 72 bp CTCTGTAGCTTCCCTAATTTGGCGGGAAGTTATGTCTaGTCATTTCATGGAGCGGAGTTCCTTGAGACGGTC +
Preference number: 4 (lower is better)
Translates to: LCSFPNLAGSYV*SFHGAEFLETV
Trigger: GACCGTCTCAAGGAACTCCGCTCCATGAAATGACAAGACATAACTTCCCGCCAAATTAGGGAAGCTACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp TCTGCCTCCACTGCTGTCAGAAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGTAGCACTTTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SASTAVRRWLWR*SMLSVSSTFRS
Trigger: ACTCCTAAAAGTGCTACTTACAGACAGCATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGTGGAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCACGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATA +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSRSRSC*RIATPI
Trigger: TATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCG...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCTTCATCTTCACAAGGTaGGCTGCAAACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGLCFLAGCFEVACHCELFIFTR*AANSAV
Trigger: CACAGCTGAGTTTGCAGCTCACCTTGTGAAGATGAA...GAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAGAGTGGCGTGGATATaGAGAACTGTGCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGRVAWI*RTVLLV
Trigger: CACCAACAGCACAGTTCTTCATATCCACGCCACTCT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTGGAGCGGAGTTCCTTaGGACGGTCACTTCATAAAG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGWSGVP*DGHFIK
Trigger: CTTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPNFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSNFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTAGCAGAGAAATAAGGTaGCGAACTTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPSREIR*RTSAST
Trigger: AGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTTGACAAGCTCTTTCTCCCTCAGCTGTGTGTTTTaGCACATGCCCCACGATGAC +
Preference number: 4 (lower is better)
Translates to: VQIGGLDRMISLLTSSFSLSCVF*HMPHDD
Trigger: GTCATCGTGGGGCATGTGGCAAAACACACAGCTGAG...GGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSDAAL*SRAKSA
Trigger: GGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSDAAL*SRAKSA
Trigger: GGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACGCTGCATTTCAGGTaGTCCTACAAAAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTLHFR*SYKRGH
Trigger: GTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTGAAATATCCACATACTaGCAGAGTCTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPEISTY*QSLGWV
Trigger: CACCCATCCCAGACTCTGCCAGTATGTGGATATTTC...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTGGTGAGGAGGCCTGTTaGCTTTATTTTATTAATGCC +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTGEEAC*LYFINA
Trigger: GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACC...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTGGCAGTCACACTCTTaGTTCTTCATATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTWQSHS*FFIFEE
Trigger: CTCCTCAAATATGAAGAACCAAGAGTGTGACTGCCA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGCCTCCTGAGTAGCTaGGACCGCAGACGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSLLSS*DRRRVP
Trigger: TGGCACACGTCTGCGGTCCCAGCTACTCAGGAGGCT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTCAGGCTGGGGTACAGTaGCCCTATCATGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAQAGVQ*PYHGSL
Trigger: CAATGAGCCATGATAGGGCCACTGTACCCCAGCCTG...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGCTCTTAGTGCAGCATaGGGAAGCCAGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSALSAA*GSQRRL
Trigger: CAGTCTTCTCTGGCTTCCCCATGCTGCACTAAGAGC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCAAAGACAAGGGGGATaGAGCTTCTACACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGQRQGG*SFYTGP
Trigger: GGGCCCTGTGTAGAAGCTCCATCCCCCTTGTCTTTG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATCCAACAGGATATTATaGGGAGACAATGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSSNRIL*GDNALC
Trigger: ACACAGGGCATTGTCTCCTCATAATATCCTGTTGGA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTTCATCTTCACAAGGTaGGCTGCAAACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGFIFTR*AANSAV
Trigger: CACAGCTGAGTTTGCAGCTCACCTTGTGAAGATGAA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGTTCATCTTCACAAGGTaGGCTGCAAACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKFIFTR*AANSAV
Trigger: CACAGCTGAGTTTGCAGCTCACCTTGTGAAGATGAA...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTTTGGTTCTTCATATTTaGGGAGATGGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSLVLHI*GDGMVR
Trigger: CCTCACCATCCCATCTCCTCAAATATGAAGAACCAA...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTCCAAGTTCTGGCCAATaGTATGTAAGCAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPPSSGQ*YVSRGS
Trigger: ACTACCTCTGCTTACATATCATTGGCCAGAACTTGG...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCTGGTCTCAAACTCCTaGCCTCGGCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALLVSNS*PRPPRE
Trigger: TTCCCTGGGAGGCCGAGGTCAGGAGTTTGAGACCAG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCTGGTCTCAAACTCCTaGCCTCGGCCTCCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKLVSNS*PRPPRE
Trigger: TTCCCTGGGAGGCCGAGGTCAGGAGTTTGAGACCAG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCTCAGCTGTGTGTTTTaGCACATGCCCCACGATGAC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLSCVF*HMPHDD
Trigger: GTCATCGTGGGGCATGTGGCAAAACACACAGCTGAG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCTTCACAAGGTGAGCTaGAAACTCAGCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSLHKVS*KLSCVF
Trigger: AAACACACAGCTGAGTTTGCAGCTCACCTTGTGAAG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTCACCATGAAATAACATaGCCTGTGTATAAACATGGC +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTHHEIT*PVYKHG
Trigger: GCCATGTTTATACACAGGGCATGTTATTTCATGGTG...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGAAATATCCACATACTaGCAGAGTCTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGEISTY*QSLGWV
Trigger: CACCCATCCCAGACTCTGCCAGTATGTGGATATTTC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGAGCAGCCCAGGTTAAACCTCTCATAAGAGGAGGAATGTCAACTCTTGCTTCTGAAATATCCACATACTaGCAGAGTCTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: RAAQVKPLIRGGMSTLASEISTY*QSLGWV
Trigger: CACCCATCCCAGACTCTGCCAGTATGTGGATATTTC...AGAAGCAAGAGTTGACATTCCTCCTCTTATGAGAGGTTTAACCTGGGCTGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTACCATACATCTGATTTaGGGCCAGAAGGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSTIHLI*GQKAMV
Trigger: AACCATTGCCTTCTGGCCCCAAATCAGATGTATGGT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACTGCTGTCAGAAGATaGCTTTGGAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTAVRR*LWRLSM
Trigger: CATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGSYLRR*DGEEAC
Trigger: ACAGGCCTCCTCACCATCCCATCTCCTCAAATATGA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACATGCACCCAAGTTCTaGCCAATGATATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSHAPKF*PMICKQ
Trigger: CTGCTTACATATCATTGGCCAGAACTTGGGTGCATG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCCCTGTTGCCCAGGCTaGGGTACAGTGGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKPCCPG*GTVALS
Trigger: TGATAGGGCCACTGTACCCCAGCCTGGGCAACAGGG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGTGTGGGCTGGTGGTaGTACTTATGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGCVGWW*YLWHSR
Trigger: CCTGGAATGCCATAAGTACCACCACCAGCCCACACA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNKRGHS*NAGSSD
Trigger: GTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGKRGHS*NAGSSD
Trigger: GTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR CAA 72 bp CAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTaGGCGGGAAGTTATGTCTTGTCATTTCATGGAGCG +
Preference number: 4 (lower is better)
Translates to: QANDNLLCSFPN*AGSYVLSFHGA
Trigger: CGCTCCATGAAATGACAAGACATAACTTCCCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATATACACAAAACCGTTaGACAGCTCACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSYTQNR*TAHRFP
Trigger: AGGAAACCTGTGAGCTGTTCAACGGTTTTGTGTATA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTGTGATCAGTGGTTTTaGAAATTCCCTGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTCDQWF*KFPVQL
Trigger: TAATTGCACAGGGAATTTTCAAAACCACTGATCACA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATTGTCCTTCATTAATTaGTCTGGGGTTGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSLSFIN*SGVGLL
Trigger: TAAGAGGCCAACCCCAGATCAATTAATGAAGGACAA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCCGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 4 (lower is better)
Translates to: TGLCFLAGCFEVACHCELRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...GAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGAATGGAGCACAAAGTaGGTCAAGACCTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGEWSTK*VKTLPI
Trigger: TATTGGCAAGGTCTTGACTCACTTTGTGCTCCATTC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGGAATGGAGCACAAAGTaGGTCAAGACCTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKEWSTK*VKTLPI
Trigger: TATTGGCAAGGTCTTGACTCACTTTGTGCTCCATTC...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTCCAATCTCATTGAGATaGTTACTCAGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPPISLR*LLSSGS
Trigger: TGATCCAGAGCTGAGTAATCATCTCAATGAGATTGG...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAGTGGCCTGTCACTGTaGGCTCACACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSGLSL*AHTSQS
Trigger: TGATTGACTTGTGTGAGCTCACAGTGACAGGCCACT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGAGGAGATGGGATGGTaGGGAGGCCTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGEEMGW*GGLLAL
Trigger: TAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGAGGAGATGGGATGGTaGGGAGGCCTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNEEMGW*GGLLAL
Trigger: TAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTAGCCATTTTCATCCATaGGATGGATGCCACATATTG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSSHFHP*DGCHIL
Trigger: CAATATGTGGCATCCATCTCATGGATGAAAATGGCT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGCCAAGTTCTGGCCAATaGTATGTAAGCAGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKPSSGQ*YVSRGS
Trigger: ACTACCTCTGCTTACATATCATTGGCCAGAACTTGG...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTAGACGTGTGCCACTATaGCCAGCTAATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTRRVPL*PANFYI
Trigger: AATATAAAAATTAGCTGGTCATAGTGGCACACGTCT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTTCGTATCATCCACCATaGAATAACATGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPSYHPP*NNMPCV
Trigger: TACACAGGGCATGTTATTTCATGGTGGATGATACGA...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTCTAACAAATAGTTGTTaGGGTCAACTGTTCGTATCA +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTLTNSC*GQLFVS
Trigger: TGATACGAACAGTTGACCTCAACAACTATTTGTTAG...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTCCTAAAGGTTGTGTGTaGGCAATTACATACCCTGTT +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPPKGCV*AITYPV
Trigger: AACAGGGTATGTAATTGCTCACACACAACCTTTAGG...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAGTGAGTCAAGACCTTaGCAATACACAAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSSESRP*QYTRSG
Trigger: TCCTGATCTTGTGTATTGGCAAGGTCTTGACTCACT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AGCTCCCCTTCTGCAGTGAAGGCAGCACTGAATGGAATGTTGATGCTTCCTGAACTCTGGATCATGAAATaGAATCATCTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPSAVKAALNGMLMLPELWIMK*NHLRED
Trigger: GTCTTCTCTCAGATGATTGCATTTCATGATCCAGAG...TTCAGGAAGCATCAACATTCCATTCAGTGCTGCCTTCACTGCAGAAGGGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAGCAGAGAAATAAGGTaGCGAACTTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: SVFINCIVLGMNSSLNSQSREIR*RTSAST
Trigger: AGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCT...CTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGTGTGTTTTGCCACATaGCCCACGATGACAATGACC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGVCFAT*PTMTMT
Trigger: GGTCATTGTCATCGTGGGGCATGTGGCAAAACACAC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SICLSVGIGVSLSIASYLSDAAL*SRAKSA
Trigger: GGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGA...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTACGCTGCATTTCAGGTaGTCCTACAAAAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGTLHFR*SYKRGH
Trigger: GTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCTGTCTCGGAACCCGTaGTCCTCCGCTTCATGTGAG +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALLSRNP*SSASCE
Trigger: CTCACATGAAGCGGAGGACCACGGGTTCCGAGACAG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGAAATATCCACATACTaGCAGAGTCTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSEISTY*QSLGWV
Trigger: CACCCATCCCAGACTCTGCCAGTATGTGGATATTTC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCGAGGGATACCCTATTaGGAAATCAACATCATCACC +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRRGIPY*EINIIT
Trigger: GGTGATGATGTTGATTTCCCAATAGGGTATCCCTCG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTTGGCAGTCACACTCTTaGTTCTTCATATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSWQSHS*FFIFEE
Trigger: CTCCTCAAATATGAAGAACCAAGAGTGTGACTGCCA...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCATGCACCCAAGTTCTaGCCAATGATATGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRHAPKF*PMICKQ
Trigger: CTGCTTACATATCATTGGCCAGAACTTGGGTGCATG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGAAGCCAGAGAAGACTaGAGGAGGTACACTGTTGTT +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSEARED*RRYTVV
Trigger: AACAACAGTGTACCTCCTCCAGTCTTCTCTGGCTTC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCAAAGACAAGGGGGATaGAGCTTCTACACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGQRQGG*SFYTGP
Trigger: GGGCCCTGTGTAGAAGCTCCATCCCCCTTGTCTTTG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTCAAAGACAAGGGGGATaGAGCTTCTACACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WKVRHLFKRSITVSGSSFQRQGG*SFYTGP
Trigger: GGGCCCTGTGTAGAAGCTCCATCCCCCTTGTCTTTG...AAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467183.6
3UTR CAA 72 bp GTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAGTCACCTCCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: VQIGGLDRMISL*TSSFSKSPPAK
Trigger: TTTGGCTGGAGGTGACTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTATACACAAAACCGTTaGACAGCTCACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRYTQNR*TAHRFP
Trigger: AGGAAACCTGTGAGCTGTTCAACGGTTTTGTGTATA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCATGCTCTTCAGCCAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ITVSGSSFIMSKQPCSSAKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...GGCTGAAGAGCATGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AGAGCAGCCCAGGTTAAACCTCTCATAAGAGGAGGAATGTCAACTCTTGCTTCTACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RAAQVKPLIRGGMSTLASTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...AGAAGCAAGAGTTGACATTCCTCCTCTTATGAGAGGTTTAACCTGGGCTGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: WKVRHLFKRSITVSGSSFASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...AAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGRSRSC*RIATPI
Trigger: TATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGGGATGGATTCTCTTaGCAGATCTGTCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGWDGFS*QICLWR
Trigger: CCTCCAAAGACAGATCTGTCAAGAGAATCCATCCCA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTGGGATGGATTCTCTTaGCAGATCTGTCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHWDGFS*QICLWR
Trigger: CCTCCAAAGACAGATCTGTCAAGAGAATCCATCCCA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTCATCTTCACAAGGTaGGCTGCAAACTCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGFIFTR*AANSAV
Trigger: CACAGCTGAGTTTGCAGCTCACCTTGTGAAGATGAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGGAGGAGATGGGATGGTaGGGAGGCCTGTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKEEMGW*GGLLAL
Trigger: TAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTC...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGAGCCATTTTCATCCATaGGATGGATGCCACATATTG +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRSHFHP*DGCHIL
Trigger: CAATATGTGGCATCCATCTCATGGATGAAAATGGCT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTTGGTAAAGGGGGTATATTTGTCCTTCATTAATTaGTCTGGGGTTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: AHLREDENRLAGLVKGVYLSFIN*SGVGPK
Trigger: CTTTGGGCCAACCCCAGATCAATTAATGAAGGACAA...ATATACCCCCTTTACCAAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505574.1
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTACCACTAGTCGTTCATaGTTTCCCCTAGAAATATCC +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGTTSRS*FPLEIS
Trigger: GGATATTTCTAGGGGAAAGCATGAACGACTAGTGGT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTATTATGAGGAGACAATaGCCTGTGTACTATACCATG +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSIMRRQ*PVYYTM
Trigger: CATGGTATAGTACACAGGGCATTGTCTCCTCATAAT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAGTGAGTCAAGACCTTaGCAATACACAAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGSESRP*QYTRSG
Trigger: TCCTGATCTTGTGTATTGGCAAGGTCTTGACTCACT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCAGCTGCTGAAGAATTaGTACTCCAATACAGAATGG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGQLLKN*YSNTEW
Trigger: CCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNKVPNF*LHCCQK
Trigger: CTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGAAGGTGCCGAACTTCTaGCTCCACTGCTGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SLSKRIILFSWYSVSFSLKVPNF*LHCCQK
Trigger: CTTCTGACAGCAGTGGAGGCAGAAGTTCGGCACCTT...CAGAGAGAAGGATACAGAGTACCAACTAAATAGAATTATTCTCTTCGACAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAGCAGAGAAATAAGGTaGCGAACTTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSREIR*RTSAST
Trigger: AGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGGTAAGCTCCCCTTCTaGAGTGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGGKLPF*SEGSTE
Trigger: TTCAGTGCTGCCTTCACTGCAGAAGGGGAGCTTACC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCACTTCACAAGGTGAGCTaGAAACTCAGCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSLHKVS*KLSCVF
Trigger: AAACACACAGCTGAGTTTGCAGCTCACCTTGTGAAG...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTCAACTCAAATCACTaGCCCTCCATCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGFNSNH*PSIPLF
Trigger: GAAGAGAGGGATGGAGGGGCAGTGATTTGAGTTGAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTAAATGCTGCAGACAATaGAAACTAATAATAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSWDNWILICKNEPGPLTKCCRQ*KLIIGP
Trigger: AGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCATATGCTTCCTGCTGTaGCTGTCTCGGAACCCGTGG +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALICFLL*LSRNPW
Trigger: CCACGGGTTCCGAGACAGCCACAGCAGGAAGCATAT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGAAATATCCACATACTaGCAGAGTCTGGGATGGGTG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGEISTY*QSLGWV
Trigger: CACCCATCCCAGACTCTGCCAGTATGTGGATATTTC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTTGGTAAAGGGGGTATATGGCCTCTTAGAAGGATaGAAGGTAAGGCACTTATTC +
Preference number: 4 (lower is better)
Translates to: AHLREDENRLAGLVKGVYGLLEG*KVRHLF
Trigger: GAATAAGTGCCTTACCTTCCATCCTTCTAAGAGGCC...ATATACCCCCTTTACCAAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGVRRWL*RLSMLS
Trigger: AGACAGCATGCTCAACCTCCAAAGCCATCTTCTGAC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTACTGCTGTCAGAAGATaGCTTTGGAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGTAVRR*LWRLSM
Trigger: CATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSNHQEL*FTGLCF
Trigger: AAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSYLRR*DGEEAC
Trigger: ACAGGCCTCCTCACCATCCCATCTCCTCAAATATGA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATCCACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IHFNLSICRNWSVFINCIKRGHS*NAGSSD
Trigger: GTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTT...GATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCAAAGACAAGGGGGATaGAGCTTCTACACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALQRQGG*SFYTGP
Trigger: GGGCCCTGTGTAGAAGCTCCATCCCCCTTGTCTTTG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394708.7
3UTR CAA 72 bp GCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAAGGTGATACCTCACTG +
Preference number: 4 (lower is better)
Translates to: AHLREDENRLAG*VKGVYKGDTSL
Trigger: CAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000505574.1
3UTR CAA 72 bp AGTCTTCACTATTCCGGATGTCAACCACCAGGAGCTTaGGTTTACTGGACTTTGTTTTCTTGCTGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: SLHYSGCQPPGA*VYWTLFSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTGACATCCGGAATAGTGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTTCCAACAGGATATTATaGGGAGACAATGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKASNRIL*GDNALC
Trigger: ACACAGGGCATTGTCTCCTCATAATATCCTGTTGGA...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTTGGTAAAGGGGGTATATACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: AHLREDENRLAGLVKGVYTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...ATATACCCCCTTTACCAAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000505574.1
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTGAATGGAGCACAAAGTaGGTCAAGACCTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAEWSTK*VKTLPI
Trigger: TATTGGCAAGGTCTTGACTCACTTTGTGCTCCATTC...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCGAATGGAGCACAAAGTaGGTCAAGACCTTGCCAATA +
Preference number: 4 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCEWSTK*VKTLPI
Trigger: TATTGGCAAGGTCTTGACTCACTTTGTGCTCCATTC...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAGTGGCCTGTCACTGTaGGCTCACACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSGLSL*AHTSQS
Trigger: TGATTGACTTGTGTGAGCTCACAGTGACAGGCCACT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGTGGCCTGTCACTGTaGGCTCACACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSGLSL*AHTSQS
Trigger: TGATTGACTTGTGTGAGCTCACAGTGACAGGCCACT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTATGCTTCCTGAAATGTaGCCACGAATAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGMLPEM*PRIKSS
Trigger: TGAAGACTTTATTCGTGGTCACATTTCAGGAAGCAT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TATTTGAGGAGATGGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATTAATGCCTTGGTTCTTCATATTTaGGGAGATGGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YLRRWDGEEACWLYFINALVLHI*GDGMVR
Trigger: CCTCACCATCCCATCTCCTCAAATATGAAGAACCAA...GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTCAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TCTGGGGTTGGCCTCTTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: SGVGLLEGWKVRHLFKRSTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...AGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCTAAGAGGCCAACCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATACTCATATGCAAGAATaGACCTGGACCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNTHMQE*TWTPHS
Trigger: GGAGTGAGGGGTCCAGGTTCATTCTTGCATATGAGT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATCAAATGCAAAATCATaGCAGAGGGTTGCTACTATT +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSSNAKS*QRVATI
Trigger: AATAGTAGCAACCCTCTGTCATGATTTTGCATTTGA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCTTGGGGCTTATATTaGTACTGGGTATCCCACGGG +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSWGLY*YWVSHG
Trigger: CCCGTGGGATACCCAGTATCAATATAAGCCCCAAGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCTTGGGGCTTATATTaGTACTGGGTATCCCACGGG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSWGLY*YWVSHG
Trigger: CCCGTGGGATACCCAGTATCAATATAAGCCCCAAGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTATTATGAGGAGACAATaGCCTGTGTACTATACCATG +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGIMRRQ*PVYYTM
Trigger: CATGGTATAGTACACAGGGCATTGTCTCCTCATAAT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGTTTGAAAATTCCCTGTaGAATTACCTCAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SVFINCIVLGMNSSLNSQFENSL*NYLRGQ
Trigger: TTGGCCCCTGAGGTAATTGCACAGGGAATTTTCAAA...CTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAAGTGAGTCAAGACCTTaGCAATACACAAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSSESRP*QYTRSG
Trigger: TCCTGATCTTGTGTATTGGCAAGGTCTTGACTCACT...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCTCTGGATCATGAAATaGAATCATCTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLWIMK*NHLRED
Trigger: GTCTTCTCTCAGATGATTGCATTTCATGATCCAGAG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCGGTAAGCTCCCCTTCTaGAGTGAAGGCAGCACTGAA +
Preference number: 4 (lower is better)
Translates to: NLSICRNWSVFINCIVLGGKLPF*SEGSTE
Trigger: TTCAGTGCTGCCTTCACTGCAGAAGGGGAGCTTACC...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGTGTGTTTTGCCACATaGCCCACGATGACAATGACC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNVCFAT*PTMTMT
Trigger: GGTCATTGTCATCGTGGGGCATGTGGCAAAACACAC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTAGTATTACCACTTTCTaGAATGGGATAAACTCCACT +
Preference number: 4 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPSITTF*NGINST
Trigger: AGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACT...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTGGCAGAGTCTGGGATaGGTGATGGTTTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHWQSLG*VMVLRI
Trigger: AATCCTTAAAACCATCACCCATCCCAGACTCTGCCA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATACTTTGTGGCAGAGTCTGGGATaGGTGATGGTTTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: LAGLVKGVYKGDTSLNTLWQSLG*VMVLRI
Trigger: AATCCTTAAAACCATCACCCATCCCAGACTCTGCCA...CAAAGTATTCAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTCGAGGGATACCCTATTaGGAAATCAACATCATCACC +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKARGIPY*EINIIT
Trigger: GGTGATGATGTTGATTTCCCAATAGGGTATCCCTCG...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCGAGGGATACCCTATTaGGAAATCAACATCATCACC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRGIPY*EINIIT
Trigger: GGTGATGATGTTGATTTCCCAATAGGGTATCCCTCG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGGCCTCTTAGAAGGATaGAAGGTAAGGCACTTATTC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGGLLEG*KVRHLF
Trigger: GAATAAGTGCCTTACCTTCCATCCTTCTAAGAGGCC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAAGGTATCCCAGAGGTaGAAAATTTTGTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGKVSQR*KILCSG
Trigger: TCCACTACACAAAATTTTCCACCTCTGGGATACCTT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGGTGAGGAGGCCTGTTaGCTTTATTTTATTAATGCC +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSGEEAC*LYFINA
Trigger: GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGGGTCCTGGGACAACTaGATACTCATATGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGGSWDN*ILICKN
Trigger: ATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCTGTGTGGGCTGGTGGTaGTACTTATGGCATTCCAGG +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALCVGWW*YLWHSR
Trigger: CCTGGAATGCCATAAGTACCACCACCAGCCCACACA...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTTATATCTGTGTGGGCTaGTGGTGGTACTTATGGCAT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAYICVG*WWYLWH
Trigger: ATGCCATAAGTACCACCACCAGCCCACACAGATATA...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGTATGTATATCTGTGTaGGCTGGTGGTGGTACTTAT +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSVCISV*AGGGTY
Trigger: ATAAGTACCACCACCAGCCCACACAGATATACATAC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGGCTCTTAGTGCAGCATaGGGAAGCCAGAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKALSAA*GSQRRL
Trigger: CAGTCTTCTCTGGCTTCCCCATGCTGCACTAAGAGC...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGAAGAGACCATACATCTaGTTTGGGGCCAGAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RRMEGKALIQKIYHSFRKKRPYI*FGARRQ
Trigger: TTGCCTTCTGGCCCCAAATCAGATGTATGGTCTCTT...CTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTGTCCTTCATTAATTaGTCTGGGGTTGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLSFIN*SGVGLL
Trigger: TAAGAGGCCAACCCCAGATCAATTAATGAAGGACAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000505574.1
CDS-3UTR TCA 90 bp ATCCACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGCATCGTACTTGGCATaGATAGCTCCCTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: IHFNLSICRNWSVFINCIASYLA*IAPSTP
Trigger: GGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGC...GATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp CTGGTGATGATAACAGTTCATCGTACTGATGACAGCGAGGAATATCCACTTCAACGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 4 (lower is better)
Translates to: LVMITVHRTDDSEEYPLQRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...TTGAAGTGGATATTCCTCGCTGTCATCAGTACGATGAACTGTTATCATCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp ATCCACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCCGGTCCCGCAGCTGCTaGAGAATTGCTACTCCAATA +
Preference number: 4 (lower is better)
Translates to: IHFNLSICRNWSVFINCIRSRSC*RIATPI
Trigger: TATTGGAGTAGCAATTCTTCAGCAGCTGCGGGACCG...GATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGTGGGATGGATTCTCTTaGCAGATCTGTCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLSKRIILFSWYSVSFSLWDGFS*QICLWR
Trigger: CCTCCAAAGACAGATCTGTCAAGAGAATCCATCCCA...CAGAGAGAAGGATACAGAGTACCAACTAAATAGAATTATTCTCTTCGACAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCCTGTGCTGTTGGTGCTaGTGCCACACTAAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NLSICRNWSVFINCIVLGLCCWC*CHTKFW
Trigger: CCAAAACTTAGTGTGGCATCAGCACCAACAGCACAG...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCCCCAGACTTTCCACTaGACAACTCTGTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGPQTFH*TTLSVT
Trigger: TGTTACAGACAGAGTTGTTCAGTGGAAAGTCTGGGG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCCTAAAGGTTGTGTGTaGGCAATTACATACCCTGTT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGPKGCV*AITYPV
Trigger: AACAGGGTATGTAATTGCTCACACACAACCTTTAGG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCTATCTATAGAACACTaGATATGCCAAGATCCAAGT +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLSIEH*ICQDPS
Trigger: ACTTGGATCTTGGCATATTCAGTGTTCTATAGATAG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCATTATGAGGAGACAATaGCCTGTGTACTATACCATG +
Preference number: 4 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSIMRRQ*PVYYTM
Trigger: CATGGTATAGTACACAGGGCATTGTCTCCTCATAAT...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTTTGAAAATTCCCTGTaGAATTACCTCAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHFENSL*NYLRGQ
Trigger: TTGGCCCCTGAGGTAATTGCACAGGGAATTTTCAAA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCATGCTCTTCAGCCTTTGAAAATTCCCTGTaGAATTACCTCAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ITVSGSSFIMSKQPCSSAFENSL*NYLRGQ
Trigger: TTGGCCCCTGAGGTAATTGCACAGGGAATTTTCAAA...GGCTGAAGAGCATGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR GCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCAGGGAGCGTGGCAGCTaGAGACAACTCATTATTGCT +
Preference number: 4 (lower is better)
Translates to: NLSICRNWSVFINCIVLGRERGS*RQLIIA
Trigger: AGCAATAATGAGTTGTCTGCAGCTGCCACGCTCCCT...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR GCA 90 bp TTCTATCTCGACCTTGTCCAAAGCTTTCACCATCCTCAAAGAGAAAATTGGGGAAGTGAGTCAAGACCTTaGCAATACACAAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: FYLDLVQSFHHPQRENWGSESRP*QYTRSG
Trigger: TCCTGATCTTGTGTATTGGCAAGGTCTTGACTCACT...TCCCCAATTTTCTCTTTGAGGATGGTGAAAGCTTTGGACAAGGTCGAGATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAAAAGCAGACATACATaGATAAGCCAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGKSRHT*ISQGFI
Trigger: AATGAAGCCTTGGCTTATGCATGTATGTCTGCTTTT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGAAAAGCAGACATACATaGATAAGCCAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: SRITRPMTISSVASLIWRKSRHT*ISQGFI
Trigger: AATGAAGCCTTGGCTTATGCATGTATGTCTGCTTTT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTCAGCTGCTGAAGAATTaGTACTCCAATACAGAATGG +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAQLLKN*YSNTEW
Trigger: CCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTG...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGNFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNNFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTAACTTCTGCCTCCACTaGTGTCAGAAGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: WKVRHLFKRSITVSGSSFNFCLH*CQKMAL
Trigger: CAAAGCCATCTTCTGACAGCAGTGGAGGCAGAAGTT...AAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGCAGAGAAATAAGGTaGCGAACTTCTGCCTCCACT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSREIR*RTSAST
Trigger: AGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGGTGTGTTTTGCCACATaGCCCACGATGACAATGACC +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKVCFAT*PTMTMT
Trigger: GGTCATTGTCATCGTGGGGCATGTGGCAAAACACAC...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTCTTATTGAAATGTTCTaGCTAGGCAGTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSLIEMF*LGSLNI
Trigger: AATGTTAAGACTGCCTAGGCAGAACATTTCAATAAG...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAAACGCTGCATTTCAGGTaGTCCTACAAAAGAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKTLHFR*SYKRGH
Trigger: GTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGT...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CTGGTGATGATAACAGTTCATCGTACTGATGACAGCGAGGAATATCCACTTCAAGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 4 (lower is better)
Translates to: LVMITVHRTDDSEEYPLQECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...TTGAAGTGGATATTCCTCGCTGTCATCAGTACGATGAACTGTTATCATCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CCA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAATCTATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSNLFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATAGATT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNVRRWL*RLSMLS
Trigger: AGACAGCATGCTCAACCTCCAAAGCCATCTTCTGAC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGVRRWL*RLSMLS
Trigger: AGACAGCATGCTCAACCTCCAAAGCCATCTTCTGAC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATACTGCTGTCAGAAGATaGCTTTGGAGGTTGAGCATG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNTAVRR*LWRLSM
Trigger: CATGCTCAACCTCCAAAGCCATCTTCTGACAGCAGT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGGTGAGGAGGCCTGTTaGCTTTATTTTATTAATGCC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGGEEAC*LYFINA
Trigger: GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCATATTTGAGGAGATaGGATGGTGAGGAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSYLRR*DGEEAC
Trigger: ACAGGCCTCCTCACCATCCCATCTCCTCAAATATGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGGCAGTCACACTCTTaGTTCTTCATATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGWQSHS*FFIFEE
Trigger: CTCCTCAAATATGAAGAACCAAGAGTGTGACTGCCA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGTAGCTTCCCTAATTTaGCGGGAAGTTATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHVASLI*REVMSC
Trigger: ACAAGACATAACTTCCCGCCAAATTAGGGAAGCTAC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp AACTTTACGGAAATGCAACAATCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: NFTEMQQSGHLV*SESGVDMKNCA
Trigger: AGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCCAGATTGTTGCATTTCCGTAAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
3UTR CAA 72 bp GGGAAGCCAGAGAAGACTGGAGGAGGTACACTGTTGTaGCTAGATTATCAAGAGTTAATAAGTGTGTTTATG +
Preference number: 4 (lower is better)
Translates to: GKPEKTGGGTLL*LDYQELISVFM
Trigger: CATAAACACACTTATTAACTCTTGATAATCTAGCAACAACAGTGTACCTCCTCCAGTCTTCTCTGGCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp TCAAAGAGAAAATTGGGGAGTGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTGTTGACAAGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKRKLGSVQIGG*DRMISLLTSSF
Trigger: GAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCACACTCCCCAATTTTCTCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTATATACTGCAAGCCCTaGAGAACCTCAAATGCTATA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGIYCKP*RTSNAI
Trigger: TATAGCATTTGAGGTTCTTCAGGGCTTGCAGTATAT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCATGCTCTTCAGCCATATACTGCAAGCCCTaGAGAACCTCAAATGCTATA +
Preference number: 4 (lower is better)
Translates to: ITVSGSSFIMSKQPCSSAIYCKP*RTSNAI
Trigger: TATAGCATTTGAGGTTCTTCAGGGCTTGCAGTATAT...GGCTGAAGAGCATGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCCAACAGGATATTATaGGGAGACAATGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSNRIL*GDNALC
Trigger: ACACAGGGCATTGTCTCCTCATAATATCCTGTTGGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGTCCAACAGGATATTATaGGGAGACAATGCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RRMEGKALIQKIYHSFRKSNRIL*GDNALC
Trigger: ACACAGGGCATTGTCTCCTCATAATATCCTGTTGGA...CTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCATGTGATCAGTGGTTTTaGAAATTCCCTGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSCDQWF*KFPVQL
Trigger: TAATTGCACAGGGAATTTTCAAAACCACTGATCACA...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCTGTGATCAGTGGTTTTaGAAATTCCCTGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSCDQWF*KFPVQL
Trigger: TAATTGCACAGGGAATTTTCAAAACCACTGATCACA...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: NWSVFINCIVLGMNSSLNTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...GTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000505574.1
CDS-3UTR TCA 90 bp TTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCAAGTGGCCTGTCACTGTaGGCTCACACAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: FKRSITVSGSSFIMSKQPSGLSL*AHTSQS
Trigger: TGATTGACTTGTGTGAGCTCACAGTGACAGGCCACT...TGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTATGCTTCCTGAAATGTaGCCACGAATAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGMLPEM*PRIKSS
Trigger: TGAAGACTTTATTCGTGGTCACATTTCAGGAAGCAT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTTGGTTCTTCATATTTaGGGAGATGGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLVLHI*GDGMVR
Trigger: CCTCACCATCCCATCTCCTCAAATATGAAGAACCAA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTGGTTCTTCATATTTaGGGAGATGGGATGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGLVLHI*GDGMVR
Trigger: CCTCACCATCCCATCTCCTCAAATATGAAGAACCAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCCCCAGACTTTCCACTaGACAACTCTGTCTGTAACA +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKPQTFH*TTLSVT
Trigger: TGTTACAGACAGAGTTGTTCAGTGGAAAGTCTGGGG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp GCACATCTCAGAGAAGATGAAAACAGACTGGCAGGTTTGGTAAAGGGGGTATATAAAAGCAGACATACATaGATAAGCCAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: AHLREDENRLAGLVKGVYKSRHT*ISQGFI
Trigger: AATGAAGCCTTGGCTTATGCATGTATGTCTGCTTTT...ATATACCCCCTTTACCAAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTCTCTGGATCATGAAATaGAATCATCTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKALWIMK*NHLRED
Trigger: GTCTTCTCTCAGATGATTGCATTTCATGATCCAGAG...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTCAATCTATTTCTTAGCTGGCATAACGACAATGTCACAGTGGTATCATCTAAAGTGTGTTTTGCCACATaGCCCACGATGACAATGACC +
Preference number: 4 (lower is better)
Translates to: FNLFLSWHNDNVTVVSSKVCFAT*PTMTMT
Trigger: GGTCATTGTCATCGTGGGGCATGTGGCAAAACACAC...TTTAGATGATACCACTGTGACATTGTCGTTATGCCAGCTAAGAAATAGATTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCTTCACAAGGTGAGCTaGAAACTCAGCTGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLHKVS*KLSCVF
Trigger: AAACACACAGCTGAGTTTGCAGCTCACCTTGTGAAG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTTCAACTCAAATCACTaGCCCTCCATCCCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKFNSNH*PSIPLF
Trigger: GAAGAGAGGGATGGAGGGGCAGTGATTTGAGTTGAA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATATGGCAGTGATAGTGTaGTCTTACTTTACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHMAVIV*SYFTVE
Trigger: CTCAACAGTAAAGTAAGAGCACACTATCACTGCCAT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCTTTCAATCTCTGCTaGTCTGCTGTTCAACTTCCA +
Preference number: 4 (lower is better)
Translates to: NWSVFINCIVLGMNSSLNSFNLC*SAVQLP
Trigger: TGGAAGTTGAACAGCAGAGCAGCAGAGATTGAAAGA...GTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTGGCAGAGTCTGGGATaGGTGATGGTTTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGWQSLG*VMVLRI
Trigger: AATCCTTAAAACCATCACCCATCCCAGACTCTGCCA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTGGCAGAGTCTGGGATaGGTGATGGTTTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNWQSLG*VMVLRI
Trigger: AATCCTTAAAACCATCACCCATCCCAGACTCTGCCA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATACCATACATCTGATTTaGGGCCAGAAGGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNTIHLI*GQKAMV
Trigger: AACCATTGCCTTCTGGCCCCAAATCAGATGTATGGT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAATCTATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGNLFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATAGATT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGATGGCATAGAGATCTaGAATGAAACCAATCTCATT +
Preference number: 4 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSDGIEI*NETNLI
Trigger: AATGAGATTGGTTTCATTCCAGATCTCTATGCCATC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCAAGGTATCCCAGAGGTaGAAAATTTTGTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCKVSQR*KILCSG
Trigger: TCCACTACACAAAATTTTCCACCTCTGGGATACCTT...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGNHQEL*FTGLCF
Trigger: AAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKANHQEL*FTGLCF
Trigger: AAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTT...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGATTTTAAAAACAATGTaGCAGAGGCAGAGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKILKTM*QRQRLL
Trigger: TAACAACCTCTGCCTCTGCCACATTGTTTTTAAAAT...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTGAAGAGGGTAGACAATaGCCCAAAAACAATGTTAGT +
Preference number: 4 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAEEGRQ*PKNNVS
Trigger: ACTAACATTGTTTTTGGGCCATTGTCTACCCTCTTC...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CTGGTGATGATAACAGTTCATCGTACTGATGACAGCGAGGAATATCCACTTCAATGCTCATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: LVMITVHRTDDSEEYPLQCSFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATGAGCA...TTGAAGTGGATATTCCTCGCTGTCATCAGTACGATGAACTGTTATCATCACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTATACACAAAACCGTTaGACAGCTCACAGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGYTQNR*TAHRFP
Trigger: AGGAAACCTGTGAGCTGTTCAACGGTTTTGTGTATA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGTGATCAGTGGTTTTaGAAATTCCCTGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGCDQWF*KFPVQL
Trigger: TAATTGCACAGGGAATTTTCAAAACCACTGATCACA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTTGTCCTTCATTAATTaGTCTGGGGTTGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLSFIN*SGVGLL
Trigger: TAAGAGGCCAACCCCAGATCAATTAATGAAGGACAA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTACATCTCAGAGAAGATaGAAACAGACTGGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGTSQRR*KQTGRF
Trigger: AAACCTGCCAGTCTGTTTTCATCTTCTCTGAGATGT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: WKVRHLFKRSITVSGSSFLYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...AAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp AATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NWSVFINCIVLGMNSSLNISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...GTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCGCCTAAATTTTGCATaGCCTTCTGGTGATGATAAC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGRLNFA*PSGDDN
Trigger: GTTATCATCACCAGAAGGTCATGCAAAATTTAGGCG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCCAATCTCATTGAGATaGTTACTCAGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGPISLR*LLSSGS
Trigger: TGATCCAGAGCTGAGTAATCATCTCAATGAGATTGG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAGGTTTGTAAAGCAATaGGAGAAGGTAATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRFVKQ*EKVMSS
Trigger: AGAACTCATTACCTTCTCTCATTGCTTTACAAACCT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTGTGATGGTAGAAGCTaGGGAGCCATTTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKCDGRS*GAIFIH
Trigger: ATGGATGAAAATGGCTCCTCAGCTTCTACCATCACA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCTGTGATGGTAGAAGCTaGGGAGCCATTTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALCDGRS*GAIFIH
Trigger: ATGGATGAAAATGGCTCCTCAGCTTCTACCATCACA...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCGTATCATCCACCATaGAATAACATGCCCTGTGTA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSYHPP*NNMPCV
Trigger: TACACAGGGCATGTTATTTCATGGTGGATGATACGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATATGTATTCCAAAACCTaGGTTCTTGGGGCTTATATT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHMYSKT*VLGAYI
Trigger: AATATAAGCCCCAAGAACTCAGGTTTTGGAATACAT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTTTGAAAATTCCCTGTaGAATTACCTCAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNFENSL*NYLRGQ
Trigger: TTGGCCCCTGAGGTAATTGCACAGGGAATTTTCAAA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGTGAGTCAAGACCTTaGCAATACACAAGATCAGGA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSESRP*QYTRSG
Trigger: TCCTGATCTTGTGTATTGGCAAGGTCTTGACTCACT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCACCATACATCTGATTTaGGGCCAGAAGGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALTIHLI*GQKAMV
Trigger: AACCATTGCCTTCTGGCCCCAAATCAGATGTATGGT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCACCATACATCTGATTTaGGGCCAGAAGGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: NLSICRNWSVFINCIVLGTIHLI*GQKAMV
Trigger: AACCATTGCCTTCTGGCCCCAAATCAGATGTATGGT...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAAACCATACATCTGATTTaGGGCCAGAAGGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKTIHLI*GQKAMV
Trigger: AACCATTGCCTTCTGGCCCCAAATCAGATGTATGGT...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RRMEGKALIQKIYHSFRKTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...CTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCTCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 4 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGATGGCATAGAGATCTaGAATGAAACCAATCTCATT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHDGIEI*NETNLI
Trigger: AATGAGATTGGTTTCATTCCAGATCTCTATGCCATC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATCCACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTCAGAAGATGGCTTTaGAGGTTGAGCATGCTGTCT +
Preference number: 4 (lower is better)
Translates to: IHFNLSICRNWSVFINCIVRRWL*RLSMLS
Trigger: AGACAGCATGCTCAACCTCCAAAGCCATCTTCTGAC...GATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGGTGAGGAGGCCTGTTaGCTTTATTTTATTAATGCC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNGEEAC*LYFINA
Trigger: GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAATGCCACACTAAGTTTTaGCAGTCACACTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKCHTKF*QSHSWF
Trigger: GAACCAAGAGTGTGACTGCCAAAACTTAGTGTGGCA...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGTAGCTTCCCTAATTTaGCGGGAAGTTATGTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNVASLI*REVMSC
Trigger: ACAAGACATAACTTCCCGCCAAATTAGGGAAGCTAC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp GAAGTTATGTCTTGTCATTTCATGGAGCGGAGTTCCTaGAGACGGTCACTTCATAAAGAGGTCTTAATTAGA +
Preference number: 4 (lower is better)
Translates to: EVMSCHFMERSS*RRSLHKEVLIR
Trigger: TCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCATGAAATGACAAGACATAACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTATATACTGCAAGCCCTaGAGAACCTCAAATGCTATA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGIYCKP*RTSNAI
Trigger: TATAGCATTTGAGGTTCTTCAGGGCTTGCAGTATAT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATATATCTTTACACAACTaGCTGATATCCTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNISLHN*LISSGR
Trigger: TCTGCCTGAGGATATCAGTCAGTTGTGTAAAGATAT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAACCAATCTCATTGAGATaGTTACTCAGCTCTGGATCA +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKPISLR*LLSSGS
Trigger: TGATCCAGAGCTGAGTAATCATCTCAATGAGATTGG...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTATGCTTCCTGAAATGTaGCCACGAATAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGMLPEM*PRIKSS
Trigger: TGAAGACTTTATTCGTGGTCACATTTCAGGAAGCAT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATATGCTTCCTGAAATGTaGCCACGAATAAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNMLPEM*PRIKSS
Trigger: TGAAGACTTTATTCGTGGTCACATTTCAGGAAGCAT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGACATCTAGTTTTGTCTaGGAGTGGCGTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKTSSFV*EWRGYE
Trigger: TTCATATCCACGCCACTCTCAGACAAAACTAGATGT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCTTCTAAGATAATATaGTTCCTGCTGTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSSKII*FLLWLS
Trigger: AGACAGCCACAGCAGGAAGCATATTATCTTAGAAGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS-3UTR GCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCACCACTAGTCGTTCATaGTTTCCCCTAGAAATATCC +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALTTSRS*FPLEIS
Trigger: GGATATTTCTAGGGGAAAGCATGAACGACTAGTGGT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGACCACTAGTCGTTCATaGTTTCCCCTAGAAATATCC +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKTTSRS*FPLEIS
Trigger: GGATATTTCTAGGGGAAAGCATGAACGACTAGTGGT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATATTATGAGGAGACAATaGCCTGTGTACTATACCATG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNIMRRQ*PVYYTM
Trigger: CATGGTATAGTACACAGGGCATTGTCTCCTCATAAT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATACTTTGAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: LAGLVKGVYKGDTSLNTLSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...CAAAGTATTCAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCTCTGGATCATGAAATaGAATCATCTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGLWIMK*NHLRED
Trigger: GTCTTCTCTCAGATGATTGCATTTCATGATCCAGAG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCTCTGGATCATGAAATaGAATCATCTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLWIMK*NHLRED
Trigger: GTCTTCTCTCAGATGATTGCATTTCATGATCCAGAG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCAGCTGCTGAAGAATTaGTACTCCAATACAGAATGG +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKQLLKN*YSNTEW
Trigger: CCATTCTGTATTGGAGTAGCAATTCTTCAGCAGCTG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTATCATGACAGAGGGTTaGTACTATTATCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGIMTEG*YYYLLT
Trigger: TGTAAGAAGATAATAGTAGCAACCCTCTGTCATGAT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATATGGCAGTGATAGTGTaGTCTTACTTTACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNMAVIV*SYFTVE
Trigger: CTCAACAGTAAAGTAAGAGCACACTATCACTGCCAT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTCACCATGAAATAACATaGCCTGTGTATAAACATGGC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGHHEIT*PVYKHG
Trigger: GCCATGTTTATACACAGGGCATGTTATTTCATGGTG...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAAATGCTGCAGACAATaGAAACTAATAATAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHKCCRQ*KLIIGP
Trigger: AGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp AGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGTTCTCTTTGGGAAAATaGAGGCTCTTTGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SLSKRIILFSWYSVSFSLFSLGK*RLFVGV
Trigger: AACACCTACAAAGAGCCTGCATTTTCCCAAAGAGAA...CAGAGAGAAGGATACAGAGTACCAACTAAATAGAATTATTCTCTTCGACAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR GCA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGCAATCTCTGCTGCTCTaGTGTTCAACTTCCAACTTG +
Preference number: 4 (lower is better)
Translates to: SICLSVGIGVSLSIASYLQSLLL*CSTSNL
Trigger: CAAGTTGGAAGTTGAACAGCAGAGCAGCAGAGATTG...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATAATTTTGATGGAATTTaGTGTGAGAGGAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHNFDGI*CERKSI
Trigger: AATGGACTTCCTCTCACACCAAATTCCATCAAAATT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAATTTTGATGGAATTTaGTGTGAGAGGAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGNFDGI*CERKSI
Trigger: AATGGACTTCCTCTCACACCAAATTCCATCAAAATT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAAGAGTGTGCAGATAGGTaGTTTGGATCGAATGATTTC +
Preference number: 4 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKECADR*FGSNDF
Trigger: GAAATCATTCGATCCAAACCACCTATCTGCACACTC...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCACGACAATGTCACAGTaGTATCATCTAAAAGCGAGC +
Preference number: 4 (lower is better)
Translates to: NLSICRNWSVFINCIVLGTTMSQ*YHLKAS
Trigger: GCTCGCTTTTAGATGATACCACTGTGACATTGTCGT...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATTCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAAGGTATCCCAGAGGTaGAAAATTTTGTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNKVSQR*KILCSG
Trigger: TCCACTACACAAAATTTTCCACCTCTGGGATACCTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAAGGTATCCCAGAGGTaGAAAATTTTGTGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGKVSQR*KILCSG
Trigger: TCCACTACACAAAATTTTCCACCTCTGGGATACCTT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNNHQEL*FTGLCF
Trigger: AAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGATGGCAGTCACACTCTTaGTTCTTCATATTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LEGWKVRHLFKRSITVSGWQSHS*FFIFEE
Trigger: CTCCTCAAATATGAAGAACCAAGAGTGTGACTGCCA...TCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATATTTTAAAAACAATGTaGCAGAGGCAGAGGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHILKTM*QRQRLL
Trigger: TAACAACCTCTGCCTCTGCCACATTGTTTTTAAAAT...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCAGAATGATCATCAATaGTGCATTCTGATTATGAAC +
Preference number: 4 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGQNDHQ*CILIMN
Trigger: GTTCATAATCAGAATGCACCATTGATGATCATTCTG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp ATACTCATTTTAAAAACAATGTGGCAGAGGCAGAGGTaGTTAGCTGTACCTCAATATGTACTCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ILILKTMWQRQR*LAVPQYVLSSS
Trigger: GGAAGAAGAGAGTACATATTGAGGTACAGCTAACAACCTCTGCCTCTGCCACATTGTTTTTAAAATGAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp ATGTCCAAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATGTGATCAGTGGTTTTaGAAATTCCCTGTGCAATTA +
Preference number: 4 (lower is better)
Translates to: MSKQPCSSARTIKVSSTQCDQWF*KFPVQL
Trigger: TAATTGCACAGGGAATTTTCAAAACCACTGATCACA...TTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTTGGACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR TCA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGTTGTCCTTCATTAATTaGTCTGGGGTTGGCCTCTTA +
Preference number: 4 (lower is better)
Translates to: SICLSVGIGVSLSIASYLLSFIN*SGVGLL
Trigger: TAAGAGGCCAACCCCAGATCAATTAATGAAGGACAA...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR TCA 90 bp ATCCACTTCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCCTTTACACAACTGACTaGTATCCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: IHFNLSICRNWSVFINCILYTTD*YPQAEL
Trigger: TAACTCTGCCTGAGGATATCAGTCAGTTGTGTAAAG...GATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGAAGTGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR TCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCAAATGCAAAATCATaGCAGAGGGTTGCTACTATT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSNAKS*QRVATI
Trigger: AATAGTAGCAACCCTCTGTCATGATTTTGCATTTGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAAAAGCAGACATACATaGATAAGCCAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGKSRHT*ISQGFI
Trigger: AATGAAGCCTTGGCTTATGCATGTATGTCTGCTTTT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGTATTACCACTTTCTaGAATGGGATAAACTCCACT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSITTF*NGINST
Trigger: AGTGGAGTTTATCCCATTGCAGAAAGTGGTAATACT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGATGGCATAGAGATCTaGAATGAAACCAATCTCATT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGDGIEI*NETNLI
Trigger: AATGAGATTGGTTTCATTCCAGATCTCTATGCCATC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGATGGCATAGAGATCTaGAATGAAACCAATCTCATT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNDGIEI*NETNLI
Trigger: AATGAGATTGGTTTCATTCCAGATCTCTATGCCATC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp ATGTCCAAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAAGATGGCATAGAGATCTaGAATGAAACCAATCTCATT +
Preference number: 4 (lower is better)
Translates to: MSKQPCSSARTIKVSSTQDGIEI*NETNLI
Trigger: AATGAGATTGGTTTCATTCCAGATCTCTATGCCATC...TTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTTGGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCAGGTGAGGAGGCCTGTTaGCTTTATTTTATTAATGCC +
Preference number: 4 (lower is better)
Translates to: FKRSITVSGSSFIMSKQPGEEAC*LYFINA
Trigger: GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACC...TGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTTTTGGTAACTATTTaGAGGAGGAAAGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGFLVTI*RRKAQE
Trigger: TTCCTGTGCTTTCCTCCTCCAAATAGTTACCAAAAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp TTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAACCTCTTAGAAGGATaGAAGGTAAGGCACTTATTC +
Preference number: 4 (lower is better)
Translates to: LEGWKVRHLFKRSITVSGNLLEG*KVRHLF
Trigger: GAATAAGTGCCTTACCTTCCATCCTTCTAAGAGGTT...TCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503832.1
CDS-3UTR TCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCAGGTTTGTAAAGCAATaGGAGAAGGTAATGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALRFVKQ*EKVMSS
Trigger: AGAACTCATTACCTTCTCTCATTGCTTTACAAACCT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCTAACAAATAGTTGTTaGGGTCAACTGTTCGTATCA +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALLTNSC*GQLFVS
Trigger: TGATACGAACAGTTGACCTCAACAACTATTTGTTAG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGATGTATTCCAAAACCTaGGTTCTTGGGGCTTATATT +
Preference number: 4 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKMYSKT*VLGAYI
Trigger: AATATAAGCCCCAAGAACTCAGGTTTTGGAATACAT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR TCA 90 bp TTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCATCAGCATTTATGAGTTaGGCAATGATTGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: FKRSITVSGSSFIMSKQPSAFMS*AMIVCQ
Trigger: TTGGCACACAATCATTGCTCAACTCATAAATGCTGA...TGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503832.1
CDS-3UTR GCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR GCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCAAAAGCAGACATACATaGATAAGCCAAGGCTTCATT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALKSRHT*ISQGFI
Trigger: AATGAAGCCTTGGCTTATGCATGTATGTCTGCTTTT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGACATCTTTCAATCTCTaGTGCTCTGCTGTTCAACTT +
Preference number: 4 (lower is better)
Translates to: SICLSVGIGVSLSIASYLTSFNL*CSAVQL
Trigger: AAGTTGAACAGCAGAGCAGCAGAGATTGAAAGATGT...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAATTTTGATGGAATTTaGTGTGAGAGGAAGTCCATT +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGNFDGI*CERKSI
Trigger: AATGGACTTCCTCTCACACCAAATTCCATCAAAATT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAATCTATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGNLFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATAGATT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp AGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGAATCTATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: SLSKRIILFSWYSVSFSLNLFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATAGATT...CAGAGAGAAGGATACAGAGTACCAACTAAATAGAATTATTCTCTTCGACAGGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 4 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTCTATCTGTAGGAATTaGAGTGTCTTTATCAATTGC +
Preference number: 4 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGSICRN*SVFINC
Trigger: GCAATTGATAAAGACACTCCAATTCCTACAGATAGA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CCA 90 bp TTCAAAAGATCTATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCAAACCACCAGGAGCTTTaGTTTACTGGACTTTGTTTT +
Preference number: 4 (lower is better)
Translates to: FKRSITVSGSSFIMSKQPNHQEL*FTGLCF
Trigger: AAAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTT...TGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGATAGATCTTTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCTTTTTGGTAACTATTTaGAGGAGGAAAGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALFLVTI*RRKAQE
Trigger: TTCCTGTGCTTTCCTCCTCCAAATAGTTACCAAAAA...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCCTTATTGAAATGTTCTaGCTAGGCAGTCTTAACATT +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALLIEMF*LGSLNI
Trigger: AATGTTAAGACTGCCTAGGCAGAACATTTCAATAAG...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCATCATGACAGAGGGTTaGTACTATTATCTTCTTACA +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALIMTEG*YYYLLT
Trigger: TGTAAGAAGATAATAGTAGCAACCCTCTGTCATGAT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CCA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCAATCTATTTCTTAGCTaGCATAACGACAATGTCACA +
Preference number: 4 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALNLFLS*HNDNVT
Trigger: TGTGACATTGTCGTTATGCCAGCTAAGAAATAGATT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp TGTACAGACTTTCATGTGATAAAGAAACTAGAAAATTaGTTTAAGCCATTCGTCTTTGCTACAGGAACTGAC +
Preference number: 4 (lower is better)
Translates to: CTDFHVIKKLEN*FKPFVFATGTD
Trigger: GTCAGTTCCTGTAGCAAAGACGAATGGCTTAAACAAATTTTCTAGTTTCTTTATCACATGAAAGTCTGTACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
3UTR CAA 72 bp AATTTTATATTAATTGAGCATATCCAATGTGGTGGGTaGCTGAAGGTAGCAAGAGGTATAAATTATAGCTCC +
Preference number: 4 (lower is better)
Translates to: NFILIEHIQCGG*LKVARGINYSS
Trigger: GGAGCTATAATTTATACCTCTTGCTACCTTCAGCAACCCACCACATTGGATATGCTCAATTAATATAAAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR GCA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGAGTGTCTTTATCAATTaGATCGTACTTGGCATGAAT +
Preference number: 4 (lower is better)
Translates to: SICLSVGIGVSLSIASYLSVFIN*IVLGMN
Trigger: ATTCATGCCAAGTACGATGCAATTGATAAAGACACT...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS TCA 90 bp CTGCTGTGGCTGTCTCGGAACCCGTGGTCCTCCGCTTCATGTGAGTaGCGTCGTGGCGGGTCACTCACTCGGGGATCGCCGATTGCGATC +
Preference number: 5 (lower is better)
Translates to: LLWLSRNPWSSASCE*RRGGSLTRGSPIAI
Trigger: GATCGCAATCGGCGATCCCCGAGTGAGTGACCCGCCACGACGTCACTCACATGAAGCGGAGGACCACGGGTTCCGAGACAGCCACAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS TCA 90 bp CTTCCTGCTGTGGCTGTCTCGGAACCCGTGGTCCTCCGCTTCATGTaGGTGACGTCGTGGCGGGTCACTCACTCGGGGATCGCCGATTGC +
Preference number: 5 (lower is better)
Translates to: LPAVAVSEPVVLRFM*VTSWRVTHSGIADC
Trigger: GCAATCGGCGATCCCCGAGTGAGTGACCCGCCACGACGTCACTCACATGAAGCGGAGGACCACGGGTTCCGAGACAGCCACAGCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS GCA 90 bp AAAAGAGGCCACTCCTGGAACGCCGGGAGCTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCCAAGGTTAACCTTCGCGGAACCCGG +
Preference number: 5 (lower is better)
Translates to: KRGHSWNAGSSDAAL*SRAKSAKVNLRGTR
Trigger: CCGGGTTCCGCGAAGGTTAACCTTGGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS CCA 90 bp CACCAGACGCTGCATTTCAGGTGCTCCTACAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGACGCTGCCCTTTGCTCGCGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: HQTLHFRCSYKRGHS*NAGSSDAALCSRAK
Trigger: CTTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGTCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS GCA 90 bp TGCTGCTGCCGCTACGGCTTAGTGCACCAGACGCTGCATTTCAGGTaGTCCTACAAAAGAGGCCACTCCTGGAACGCCGGGAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: CCCRYGLVHQTLHFR*SYKRGHSWNAGSSD
Trigger: GTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGTCTGGTGCACTAAGCCGTAGCGGCAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS CCA 90 bp TCAGCCAAGGTTAACCTTCGCGGAACCCGGCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGATCCGAGCTTTTCACCCTCTACCCTC +
Preference number: 5 (lower is better)
Translates to: SAKVNLRGTRRGAQA*PSPNTDPSFSPSTL
Trigger: GAGGGTAGAGGGTGAAAAGCTCGGATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCGCCGGGTTCCGCGAAGGTTAACCTTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361687.8
ENST00000507696.1
ENST00000509532.5
CDS-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCACTCAGACGCTGCCCTTaGCTCGCGAGCCAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSLRRCP*LASQVS
Trigger: GCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGAG...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394708.7
CDS TCA 90 bp CAGCTCAGGTCTACAGCTCCCAGCCTGAGCGACGCAGAAGACAGGTaGTTTCTGCATTTCCATTTGAGGTACCGGGTTCATCTCACTAGG +
Preference number: 5 (lower is better)
Translates to: QLRSTAPSLSDAEDR*FLHFHLRYRVHLTR
Trigger: CCTAGTGAGATGAACCCGGTACCTCAAATGGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCAGGCTGGGAGCTGTAGACCTGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCTCAGACGCTGCCCTTaGCTCGCGAGCCAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLRRCP*LASQVS
Trigger: GCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGAG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp GAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCTTGACAGATCTGTCTTaGGAGGATCTGGACACTCAG +
Preference number: 5 (lower is better)
Translates to: EDLDTQQRNKVPNFCLHCLTDLS*EDLDTQ
Trigger: CTGAGTGTCCAGATCCTCCAAAGACAGATCTGTCAA...GCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCCTCAGACGCTGCCCTTaGCTCGCGAGCCAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCLRRCP*LASQVS
Trigger: GCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGAG...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTTCTTGGGGCTTATATaGATACTGGGTATCCCACGG +
Preference number: 5 (lower is better)
Translates to: GSWDNWILICKNEPGPLTFLGLI*ILGIPR
Trigger: CCGTGGGATACCCAGTATCAATATAAGCCCCAAGAA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTATGGAGCGGAGTTCCTaGAGACGGTCACTTCATAAA +
Preference number: 5 (lower is better)
Translates to: GSWDNWILICKNEPGPLTMERSS*RRSLHK
Trigger: TTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCAT...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS CCA 90 bp TGGATCATGAAATGCAATCATCTGAGAGAAGACAGTCAGATACTCTaGACAATCGGGTCACTCCCACCCGAATACTGCGCTTTTCCGACG +
Preference number: 5 (lower is better)
Translates to: WIMKCNHLREDSQIL*TIGSLPPEYCAFPT
Trigger: CGTCGGAAAAGCGCAGTATTCGGGTGGGAGTGACCCGATTGTCCAGAGTATCTGACTGTCTTCTCTCAGATGATTGCATTTCATGATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514689.5
CDS-3UTR CAA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTCCTCAAAGAGAAAATaGGGGAGTGTGCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: GSWDNWILICKNEPGPLTSSKRK*GSVQIG
Trigger: ACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GAGGATCTGGACACTCAGCAGAGAAATAAGGTGCCGAACTTCTGCCTCCACTGCGTCCAACAAAACAGGTaGATAGATTCTCTCACACAG +
Preference number: 5 (lower is better)
Translates to: EDLDTQQRNKVPNFCLHCVQQNR*IDSLTQ
Trigger: CTGTGTGAGAGAATCTATCAACCTGTTTTGTTGGAC...GCAGTGGAGGCAGAAGTTCGGCACCTTATTTCTCTGCTGAGTGTCCAGATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCATGTCAGAAGATGGCTTaGGAGGTTGAGCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSCQKMA*EVEHAV
Trigger: GACAGCATGCTCAACCTCCAAAGCCATCTTCTGACA...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCAGCTGTCAGAAGATGGCTTaGGAGGTTGAGCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: INCIVLGMNSSLNSQKSSCQKMA*EVEHAV
Trigger: GACAGCATGCTCAACCTCCAAAGCCATCTTCTGACA...GCTGCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTTGTAGCTTCCCTAATTaGGCGGGAAGTTATGTCTTG +
Preference number: 5 (lower is better)
Translates to: GSWDNWILICKNEPGPLTCSFPN*AGSYVL
Trigger: CAAGACATAACTTCCCGCCAAATTAGGGAAGCTACA...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ACTGGACTTTGTTTTCTTGCTGGGTGTTTTGAAGTGGCCTGTCACTGTGAGCTCGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: TGLCFLAGCFEVACHCELASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...GAGCTCACAGTGACAGGCCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTGTCAGAAGATGGCTTaGGAGGTTGAGCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGCQKMA*EVEHAV
Trigger: GACAGCATGCTCAACCTCCAAAGCCATCTTCTGACA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CTGCAATGGGATAAACTCCACTTCCTATACACACACACACACACACATCCCCCTTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: LQWDKLHFLYTHTHTHPPSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...AGGGGGATGTGTGTGTGTGTGTGTGTATAGGAAGTGGAGTTTATCCCATTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGGTCCTGGGACAACTGGATACTCATATGCAAGAATGAACCTGGACCCCTCACTGAAGAGGGTTTGGTCTaGACATTGAACATCCAAACT +
Preference number: 5 (lower is better)
Translates to: GSWDNWILICKNEPGPLTEEGLV*TLNIQT
Trigger: AGTTTGGATGTTCAATGTCAAGACCAAACCCTCTTC...AGTGAGGGGTCCAGGTTCATTCTTGCATATGAGTATCCAGTTGTCCCAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAGTGAGAGGAAGTCCATaGCTTCCACAAACATCATGT +
Preference number: 5 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSVRGSP*LPQTSC
Trigger: ACATGATGTTTGTGGAAGCAATGGACTTCCTCTCAC...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: SRITRPMTISSVASLIWRRWLWR*SMLSVS
Trigger: ACTTACAGACAGCATGCTCAACCTCCAAAGCCATCT...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTGGCAGAGGCAGAGGTaGTTAGCTGTACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGWQRQR*LAVPQY
Trigger: ATATTGAGGTACAGCTAACAACCTCTGCCTCTGCCA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS TCA 90 bp GTCTCTAGGAAGCTCCAAATTTTCCCACATTTTCATGTCTTCTTCTaGGCCCTCCAAACTGTTCCAACCTCAGCCTGTTATCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: VSRKLQIFPHFHVFF*ALQTVPTSACYPVP
Trigger: TGGAACTGGATAACAGGCTGAGGTTGGAACAGTTTGGAGGGCTCAGAAGAAGACATGAAAATGTGGGAAAATTTGGAGCTTCCTAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506384.1
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGACCATACATCTGATTaGGGGCCAGAAGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGDHTSD*GPEGNG
Trigger: ACCATTGCCTTCTGGCCCCAAATCAGATGTATGGTC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTGACCATACATCTGATTaGGGGCCAGAAGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: AGEMINHPKTLFPVFLKADHTSD*GPEGNG
Trigger: ACCATTGCCTTCTGGCCCCAAATCAGATGTATGGTC...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATTGATACTGGGTATCCCACGGGCCTAAAAGCTGTGCCTTTCAGGTCCTTTTCAAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 5 (lower is better)
Translates to: IDTGYPTGLKAVPFRSFSNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...TGAAAAGGACCTGAAAGGCACAGCTTTTAGGCCCGTGGGATACCCAGTATCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCAGCCGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: INCIVLGMNSSLNSQKSSRMISL*TSSFSK
Trigger: CTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCG...GCTGCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp TTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTCCCAGAAGAGCGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: FINCIVLGMNSSLNSQKSASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...GCTCTTCTGGGAGTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CAA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTGTCCAACAAAACAGGTaGATAGATTCTCTCACACAG +
Preference number: 5 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSVQQNR*IDSLTQ
Trigger: CTGTGTGAGAGAATCTATCAACCTGTTTTGTTGGAC...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGTCAGAAGATGGCTTaGGAGGTTGAGCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGCQKMA*EVEHAV
Trigger: GACAGCATGCTCAACCTCCAAAGCCATCTTCTGACA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCATTGACAGATCTGTCTTaGGAGGATCTGGACACTCAG +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSLTDLS*EDLDTQ
Trigger: CTGAGTGTCCAGATCCTCCAAAGACAGATCTGTCAA...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTCTTGCTGGGTGTTTaGAAGTGGCCTGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGFLLGV*KWPVTV
Trigger: CACAGTGACAGGCCACTTCAAAACACCCAGCAAGAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATACTTTGTTCTTGCTGGGTGTTTaGAAGTGGCCTGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: LAGLVKGVYKGDTSLNTLFLLGV*KWPVTV
Trigger: CACAGTGACAGGCCACTTCAAAACACCCAGCAAGAA...CAAAGTATTCAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGCTGGACTTTGTTTTCTaGCTGGGTGTTTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SRITRPMTISSVASLIWRLDFVF*LGVLKW
Trigger: CCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAG...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTCTGGACTTTGTTTTCTaGCTGGGTGTTTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGLDFVF*LGVLKW
Trigger: CCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAG...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCAACCACCAGGAGCTTaGGTTTACTGGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGQPPGA*VYWTLF
Trigger: AAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTGTCAGCTGAATTTCTaGGGCTTTATGTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SRITRPMTISSVASLIWRCQLNF*GFMWQC
Trigger: ACACTGCCACATAAAGCCCAAGAAATTCAGCTGACA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATGCGGGAAGTTATGTCTaGTCATTTCATGGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHAGSYV*SFHGAE
Trigger: CTCCGCTCCATGAAATGACAAGACATAACTTCCCGC...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTGCGGGAAGTTATGTCTaGTCATTTCATGGAGCGGAG +
Preference number: 5 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAAGSYV*SFHGAE
Trigger: CTCCGCTCCATGAAATGACAAGACATAACTTCCCGC...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GTGCAGATAGGTGGTTTGGATCGAATGATTTCCTTGTTGACAAGCTCTTTCTCCGTGAGAGGAAGTCCATaGCTTCCACAAACATCATGT +
Preference number: 5 (lower is better)
Translates to: VQIGGLDRMISLLTSSFSVRGSP*LPQTSC
Trigger: ACATGATGTTTGTGGAAGCAATGGACTTCCTCTCAC...GGAGAAAGAGCTTGTCAACAAGGAAATCATTCGATCCAAACCACCTATCTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp CCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAAGTAAGCGACCATACATCTGATTaGGGGCCAGAAGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: PCSSARTIKVSSTQSKVSDHTSD*GPEGNG
Trigger: ACCATTGCCTTCTGGCCCCAAATCAGATGTATGGTC...GCTTACTTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTCGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGRMISL*TSSFSK
Trigger: CTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCG...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCATCCTCAAAGAGAAAATaGGGGAGTGTGCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSSSKRK*GSVQIG
Trigger: ACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGA...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: AGEMINHPKTLFPVFLKARWLWR*SMLSVS
Trigger: ACTTACAGACAGCATGCTCAACCTCCAAAGCCATCT...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGRWLWR*SMLSVS
Trigger: ACTTACAGACAGCATGCTCAACCTCCAAAGCCATCT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TATTTGAGGAGATGGGATGGTGAGGAGGCCTGTTGGCTTTATTTTATTAATGCCAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: YLRRWDGEEACWLYFINARWLWR*SMLSVS
Trigger: ACTTACAGACAGCATGCTCAACCTCCAAAGCCATCT...GGCATTAATAAAATAAAGCCAACAGGCCTCCTCACCATCCCATCTCCTCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSNAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTGCCCAGAAAGCTGAATaGAGGCTCTTATTGAAATGT +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGAQKAE*RLLLKC
Trigger: ACATTTCAATAAGAGCCTCAATTCAGCTTTCTGGGC...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS CCA 90 bp AGAATGTCTGCTCATTTCTTAGCTGGCATAACGACAATGTCACAGTaGTATCATCTAAAAGCGAGCTTCTATCTCGACCTTGTCCAAAGC +
Preference number: 5 (lower is better)
Translates to: RMSAHFLAGITTMSQ*YHLKASFYLDLVQS
Trigger: GCTTTGGACAAGGTCGAGATAGAAGCTCGCTTTTAGATGATACCACTGTGACATTGTCGTTATGCCAGCTAAGAAATGAGCAGACATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGTGAGAGGAAGTCCATaGCTTCCACAAACATCATGT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGVRGSP*LPQTSC
Trigger: ACATGATGTTTGTGGAAGCAATGGACTTCCTCTCAC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCTATACACAAAACCGTaGAACAGCTCACAGGTTTCC +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLYTKP*NSSQVS
Trigger: GGAAACCTGTGAGCTGTTCAACGGTTTTGTGTATAG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TCAAGAATAACCAGGCCAATGACAATCTCCTCTGTAGCTTCCCTAATTTGGCGGTGTACTATACCATGTTaGTTCATATACTGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: SRITRPMTISSVASLIWRCTIPC*FIYCKP
Trigger: GGGCTTGCAGTATATGAACAAACATGGTATAGTACA...CCGCCAAATTAGGGAAGCTACAGAGGAGATTGTCATTGGCCTGGTTATTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTACGAGGGATACCCTATaGGGAAATCAACATCATCAC +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGTRDTL*GNQHHH
Trigger: GTGATGATGTTGATTTCCCAATAGGGTATCCCTCGT...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGACCATACATCTGATTaGGGGCCAGAAGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNDHTSD*GPEGNG
Trigger: ACCATTGCCTTCTGGCCCCAAATCAGATGTATGGTC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAGGACCATACATCTGATTaGGGGCCAGAAGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: RRMEGKALIQKIYHSFRKDHTSD*GPEGNG
Trigger: ACCATTGCCTTCTGGCCCCAAATCAGATGTATGGTC...CTTCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000503832.1
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCACGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSRMISL*TSSFSK
Trigger: CTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCG...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GCTGGGGAAATGATCAACCACCCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: AGEMINHPKTLFPVFLKAVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...AGCTTTAAGGAAAACTGGAAATAGAGTCTTTGGGTGGTTGATCATTTCCCCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTTCTTGCTGGGTGTTTaGAAGTGGCCTGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNFLLGV*KWPVTV
Trigger: CACAGTGACAGGCCACTTCAAAACACCCAGCAAGAA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTCTTGCTGGGTGTTTaGAAGTGGCCTGTCACTGTG +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGFLLGV*KWPVTV
Trigger: CACAGTGACAGGCCACTTCAAAACACCCAGCAAGAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTCTGGACTTTGTTTTCTaGCTGGGTGTTTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLDFVF*LGVLKW
Trigger: CCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAG...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CCAAAGACTCTATTTCCAGTTTTCCTTAAAGCTAGGTGTGGCCATGCACCCAAGTTGGTTTACTGGACTTaGTTTTCTTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: PKTLFPVFLKARCGHAPKLVYWT*FSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAA...CTTGGGTGCATGGCCACACCTAGCTTTAAGGAAAACTGGAAATAGAGTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTTTGGTTTACTGGACTTaGTTTTCTTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGLVYWT*FSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAA...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp ACAAGTCAATCAGGTCCTCTGCTGAAATCCGTGGTGATACTTCTGACTTCAGGTTTGGTTTACTGGACTTaGTTTTCTTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: TSQSGPLLKSVVILLTSGLVYWT*FSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAA...ACCTGAAGTCAGAAGTATCACCACGGATTTCAGCAGAGGACCTGATTGACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AGTTCCTTGAGACGGTCACTTCATAAAGAGGTCTTAATTAGAACTCCCACCCATCAACCACCAGGAGCTTaGGTTTACTGGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: SSLRRSLHKEVLIRTPTHQPPGA*VYWTLF
Trigger: AAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTG...ATGGGTGGGAGTTCTAATTAAGACCTCTTTATGAAGTGACCGTCTCAAGGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AAACATGGTAAGAAACCAAGGGATGGCATAGAGATCTGGAATGAAACCAATCTCTCTGGACATCTAGTTTaGTCTGAGAGTGGCGTGGAT +
Preference number: 5 (lower is better)
Translates to: KHGKKPRDGIEIWNETNLSGHLV*SESGVD
Trigger: ATCCACGCCACTCTCAGACAAAACTAGATGTCCAGA...GAGATTGGTTTCATTCCAGATCTCTATGCCATCCCTTGGTTTCTTACCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTGTCAGCTGAATTTCTaGGGCTTTATGTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGCQLNF*GFMWQC
Trigger: ACACTGCCACATAAAGCCCAAGAAATTCAGCTGACA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp GGACATCTAGTTTTGTCTGAGAGTGGCGTGGATATGAAGAACTGTGCTGTTGGTAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GHLVLSESGVDMKNCAVGNAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...ACCAACAGCACAGTTCTTCATATCCACGCCACTCTCAGACAAAACTAGATGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGCCCAGAAAGCTGAATaGAGGCTCTTATTGAAATGT +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSAQKAE*RLLLKC
Trigger: ACATTTCAATAAGAGCCTCAATTCAGCTTTCTGGGC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp TCTCCTACTACCTACCACCTTATTCAACTCAAATCACTGCCCCTCCATCCCTCTAATCATGACAGAGGGTaGCTACTATTATCTTCTTAC +
Preference number: 5 (lower is better)
Translates to: SPTTYHLIQLKSLPLHPSNHDRG*LLLSSY
Trigger: GTAAGAAGATAATAGTAGCAACCCTCTGTCATGATT...AGAGGGATGGAGGGGCAGTGATTTGAGTTGAATAAGGTGGTAGGTAGTAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAGAAGAGGGTTTGGTCTaGACATTGAACATCCAAACT +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSEEGLV*TLNIQT
Trigger: AGTTTGGATGTTCAATGTCAAGACCAAACCCTCTTC...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp CTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATACTTTGAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 5 (lower is better)
Translates to: LAGLVKGVYKGDTSLNTLNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...CAAAGTATTCAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000505574.1
CDS-3UTR CAA 90 bp AACAGACTGGCAGGTTTGGTAAAGGGGGTATATAAAGGTGATACCTCACTGAATCGAATGATTTCCTTGTaGACAAGCTCTTTCTCCAAG +
Preference number: 5 (lower is better)
Translates to: NRLAGLVKGVYKGDTSLNRMISL*TSSFSK
Trigger: CTTGGAGAAAGAGCTTGTCAACAAGGAAATCATTCG...ATTCAGTGAGGTATCACCTTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AAACATGGTAAGAAACCAAGGGATGGCATAGAGATCTGGAATGAAACCAATCTCTCCTCAAAGAGAAAATaGGGGAGTGTGCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: KHGKKPRDGIEIWNETNLSSKRK*GSVQIG
Trigger: ACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGA...GAGATTGGTTTCATTCCAGATCTCTATGCCATCCCTTGGTTTCTTACCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTGTCCAACAAAACAGGTaGATAGATTCTCTCACACAG +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGVQQNR*IDSLTQ
Trigger: CTGTGTGAGAGAATCTATCAACCTGTTTTGTTGGAC...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAGATGGCTTTGGAGGTaGAGCATGCTGTCTGTAAGT +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNRWLWR*SMLSVS
Trigger: ACTTACAGACAGCATGCTCAACCTCCAAAGCCATCT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCTGTCAGAAGATGGCTTaGGAGGTTGAGCATGCTGTC +
Preference number: 5 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALCQKMA*EVEHAV
Trigger: GACAGCATGCTCAACCTCCAAAGCCATCTTCTGACA...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTGACAGATCTGTCTTaGGAGGATCTGGACACTCAG +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGLTDLS*EDLDTQ
Trigger: CTGAGTGTCCAGATCCTCCAAAGACAGATCTGTCAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTTGACAGATCTGTCTTaGGAGGATCTGGACACTCAG +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNLTDLS*EDLDTQ
Trigger: CTGAGTGTCCAGATCCTCCAAAGACAGATCTGTCAA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CATAGCTCTCTTCACAAGGTCTTCATCCTCTCCTACTACCTACCACCTTATTCAAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: HSSLHKVFILSYYLPPYSNAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...TGAATAAGGTGGTAGGTAGTAGGAGAGGATGAAGACCTTGTGAAGAGAGCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTCTTGGGGCTTATATaGATACTGGGTATCCCACGG +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGFLGLI*ILGIPR
Trigger: CCGTGGGATACCCAGTATCAATATAAGCCCCAAGAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp TCTGGGGTTGGCCTCTTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTCCTTTTAGTTTCTCTTaGGGAAAATGCAGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SGVGLLEGWKVRHLFKRSPFSFS*GKCRLF
Trigger: AAAGAGCCTGCATTTTCCCAAAGAGAAACTAAAAGG...AGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCTAAGAGGCCAACCCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCATGAATAGCTCCCTCAACTGTTCAACTTCCAACTaGAAGGCAGAATGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: NWSVFINCIVLGMNSSLNCSTSN*KAECLL
Trigger: GAGCAGACATTCTGCCTTCAAGTTGGAAGTTGAACA...GTTGAGGGAGCTATTCATGCCAAGTACGATGCAATTGATAAAGACACTCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508666.5
CDS TCA 90 bp AATGCCCTGTGTACTATACCATGTTTGTTCATATACTGCAAGCCCTaGAGAACCTCAAATGCTATACACAAAACCGTTGAACAGCTCACA +
Preference number: 5 (lower is better)
Translates to: NALCTIPCLFIYCKP*RTSNAIHKTVEQLT
Trigger: TGTGAGCTGTTCAACGGTTTTGTGTATAGCATTTGAGGTTCTTCAGGGCTTGCAGTATATGAACAAACATGGTATAGTACACAGGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000506280.1
ENST00000509532.5
CDS GCA 90 bp TTTAATATGTCCCTTTCGGTCCAACAGGATATTATGAGGAGACAATaGCCTGTGTACTATACCATGTTTGTTCATATACTGCAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: FNMSLSVQQDIMRRQ*PVYYTMFVHILQAL
Trigger: CAGGGCTTGCAGTATATGAACAAACATGGTATAGTACACAGGGCATTGTCTCCTCATAATATCCTGTTGGACCGAAAGGGACATATTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000506280.1
ENST00000509532.5
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGTGAGAGGAAGTCCATaGCTTCCACAAACATCATGT +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGVRGSP*LPQTSC
Trigger: ACATGATGTTTGTGGAAGCAATGGACTTCCTCTCAC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTACGAGGGATACCCTATaGGGAAATCAACATCATCAC +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGTRDTL*GNQHHH
Trigger: GTGATGATGTTGATTTCCCAATAGGGTATCCCTCGT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTCCTCAAAGAGAAAATaGGGGAGTGTGCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNSSKRK*GSVQIG
Trigger: ACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AGCCTGTCGAAGAGAATAATTCTATTTAGTTGGTACTCTGTATCCTTCTCTCTGTCCTCAAAGAGAAAATaGGGGAGTGTGCAGATAGGT +
Preference number: 5 (lower is better)
Translates to: SLSKRIILFSWYSVSFSLSSKRK*GSVQIG
Trigger: ACCTATCTGCACACTCCCCAATTTTCTCTTTGAGGA...CAGAGAGAAGGATACAGAGTACCAACTAAATAGAATTATTCTCTTCGACAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CAA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCGCTTCTATCTCGACCTaGTCCAAAGCTTTCACCATC +
Preference number: 5 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALASIST*SKAFTI
Trigger: GATGGTGAAAGCTTTGGACAAGGTCGAGATAGAAGC...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp ATGCTAAATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTTTGGTTTACTGGACTTaGTTTTCTTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: MLNLSCQLNFLGFMWQCGLVYWT*FSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAA...ACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATTTAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATCAACCACCAGGAGCTTaGGTTTACTGGACTTTGTTT +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNQPPGA*VYWTLF
Trigger: AAACAAAGTCCAGTAAACCAAAGCTCCTGGTGGTTG...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATTGTCAGCTGAATTTCTaGGGCTTTATGTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNCQLNF*GFMWQC
Trigger: ACACTGCCACATAAAGCCCAAGAAATTCAGCTGACA...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp ATCACAGTTTCAGGAAGCTCCTTTATAATGTCCAAACAACCATGCTCTTCAGCCAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: ITVSGSSFIMSKQPCSSANAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...GGCTGAAGAGCATGGTTGTTTGGACATTATAAAGGAGCTTCCTGAAACTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTGGCAGAGGCAGAGGTaGTTAGCTGTACCTCAATAT +
Preference number: 5 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKWQRQR*LAVPQY
Trigger: ATATTGAGGTACAGCTAACAACCTCTGCCTCTGCCA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCATGGAGCGGAGTTCCTaGAGACGGTCACTTCATAAA +
Preference number: 5 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALMERSS*RRSLHK
Trigger: TTTATGAAGTGACCGTCTCAAGGAACTCCGCTCCAT...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGACGAGGGATACCCTATaGGGAAATCAACATCATCAC +
Preference number: 5 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKTRDTL*GNQHHH
Trigger: GTGATGATGTTGATTTCCCAATAGGGTATCCCTCGT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGGCGTGCAGATAGGTGGTTaGGATCGAATGATTTCCTTG +
Preference number: 5 (lower is better)
Translates to: NLSICRNWSVFINCIVLGVQIGG*DRMISL
Trigger: CAAGGAAATCATTCGATCCAAACCACCTATCTGCAC...GCCAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467183.6
ENST00000508666.5
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTGTCCAACAAAACAGGTaGATAGATTCTCTCACACAG +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGVQQNR*IDSLTQ
Trigger: CTGTGTGAGAGAATCTATCAACCTGTTTTGTTGGAC...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGCTGGACTTTGTTTTCTaGCTGGGTGTTTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKLDFVF*LGVLKW
Trigger: CCACTTCAAAACACCCAGCAAGAAAACAAAGTCCAG...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGTGTAGCTTCCCTAATTaGGCGGGAAGTTATGTCTTG +
Preference number: 5 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKCSFPN*AGSYVL
Trigger: CAAGACATAACTTCCCGCCAAATTAGGGAAGCTACA...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp GTCACCTCCAGCCAAACACCAAAGGTAATACACTTCTTCAATAGATCTTTCTGCTCTTTCACATACCTATaGGGAAATCAACATCATCAC +
Preference number: 5 (lower is better)
Translates to: VTSSQTPKVIHFFNRSFCSFTYL*GNQHHH
Trigger: GTGATGATGTTGATTTCCCAATAGGTATGTGAAAGA...GCAGAAAGATCTATTGAAGAAGTGTATTACCTTTGGTGTTTGGCTGGAGGTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS CCA 90 bp CATATCTGGAATGAAACCAATCTCATTGAGATGATTACTCAGCTCTaGATCATGAAATGCAATCATCTGAGAGAAGACAGTCAGATACTC +
Preference number: 5 (lower is better)
Translates to: HIWNETNLIEMITQL*IMKCNHLREDSQIL
Trigger: GAGTATCTGACTGTCTTCTCTCAGATGATTGCATTTCATGATCCAGAGCTGAGTAATCATCTCAATGAGATTGGTTTCATTCCAGATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506615.1
ENST00000514689.5
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTGTACTATACCATGTTaGTTCATATACTGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGCTIPC*FIYCKP
Trigger: GGGCTTGCAGTATATGAACAAACATGGTATAGTACA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TTAGAAGGATGGAAGGTAAGGCACTTATTCAAAAGATCTATCACAGTTTCAGGAAACAGACTGGCAGGTTaGGTAAAGGGGGTATATAAA +
Preference number: 5 (lower is better)
Translates to: LEGWKVRHLFKRSITVSGNRLAG*VKGVYK
Trigger: TTTATATACCCCCTTTACCAAACCTGCCAGTCTGTT...TCCTGAAACTGTGATAGATCTTTTGAATAAGTGCCTTACCTTCCATCCTTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp TTCAGCAATACATGTAGAGTCAAGTTTCTTGCATGGATAACTGAACATGTGGGTTTGGTTTACTGGACTTaGTTTTCTTGCTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: FSNTCRVKFLAWITEHVGLVYWT*FSCWVF
Trigger: AAACACCCAGCAAGAAAACAAAGTCCAGTAAACCAA...ACCCACATGTTCAGTTATCCATGCAAGAAACTTGACTCTACATGTATTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp TCAATTTGTCTATCTGTAGGAATTGGAGTGTCTTTATCAATTGCATCGTACTTGTGTCAGCTGAATTTCTaGGGCTTTATGTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SICLSVGIGVSLSIASYLCQLNF*GFMWQC
Trigger: ACACTGCCACATAAAGCCCAAGAAATTCAGCTGACA...CAAGTACGATGCAATTGATAAAGACACTCCAATTCCTACAGATAGACAAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AATCTGTCTTGTCAGCTGAATTTCTTGGGCTTTATGTGGCAGTGTGGTAAAAATAATGCTAAATCTGTCTaGTCAGCTGAATTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: NLSCQLNFLGFMWQCGKNNAKSV*SAEFLG
Trigger: CCCAAGAAATTCAGCTGACAAGACAGATTTAGCATT...ATTTTTACCACACTGCCACATAAAGCCCAAGAAATTCAGCTGACAAGACAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000273980.10
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
CDS-3UTR CAA 90 bp CAAATGCAAAATCATGACAGAGGGTTGCTACTATTATCTTCTTACATAGCTCTCTGTACTATACCATGTTaGTTCATATACTGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: QMQNHDRGLLLLSSYIALCTIPC*FIYCKP
Trigger: GGGCTTGCAGTATATGAACAAACATGGTATAGTACA...GAGAGCTATGTAAGAAGATAATAGTAGCAACCCTCTGTCATGATTTTGCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS-3UTR CAA 90 bp AAACAACCATGCTCTTCAGCCAGAACTATTAAAGTGTCATCTACACAATCCAAATGTACTATACCATGTTaGTTCATATACTGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: KQPCSSARTIKVSSTQSKCTIPC*FIYCKP
Trigger: GGGCTTGCAGTATATGAACAAACATGGTATAGTACA...TTTGGATTGTGTAGATGACACTTTAATAGTTCTGGCTGAAGAGCATGGTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467183.6
CDS-3UTR CAA 90 bp AAATGCTGCAGACAATGCAAACTAATAATAGGTCCTCTGAAAGGAATGAGAAAGAATCATGACAGAGGGTaGCTACTATTATCTTCTTAC +
Preference number: 5 (lower is better)
Translates to: KCCRQCKLIIGPLKGMRKNHDRG*LLLSSY
Trigger: GTAAGAAGATAATAGTAGCAACCCTCTGTCATGATT...CTTTCTCATTCCTTTCAGAGGACCTATTATTAGTTTGCATTGTCTGCAGCATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273980.10
ENST00000394708.7
CDS GCA 72 bp CTAGGGAGTGACAGACAGTGGGCGCAGGCAAGTGGGTaGGCGCACCGTGCGCGAGCCAAAGCAGGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: LGSDRQWAQASG*AHRARAKAGRG
Trigger: GCCTCGCCCTGCTTTGGCTCGCGCACGGTGCGCGCACCCACTTGCCTGCGCCCACTGTCTGTCACTCCCTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS GCA 72 bp CGCGCACCGTGCGCGAGCCAAAGCAGGGCGAGGCATTaGCTCACTCGGGAAGCGCAAGGGGTCAGGGAGTTC +
Preference number: 6 (lower is better)
Translates to: RAPCASQSRARH*LTREAQGVREF
Trigger: GAACTCCCTGACCCCTTGCGCTTCCCGAGTGAGGCAATGCCTCGCCCTGCTTTGGCTCGCGCACGGTGCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS GCA 72 bp CAGACAGTGGGCGCAGGCAAGTGGGTGCGCGCACCGTaGGCGAGCCAAAGCAGGGCGAGGCATTGCCTCACT +
Preference number: 6 (lower is better)
Translates to: QTVGAGKWVRAP*ASQSRARHCLT
Trigger: AGTGAGGCAATGCCTCGCCCTGCTTTGGCTCGCGCACGGTGCGCGCACCCACTTGCCTGCGCCCACTGTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS CAA 72 bp GCGCGCACCGTGCGCGAGCCAAAGCAGGGCGAGGCATaGCCTCACTCGGGAAGCGCAAGGGGTCAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: ARTVREPKQGEA*PHSGSARGQGV
Trigger: AACTCCCTGACCCCTTGCGCTTCCCGAGTGAGGCAATGCCTCGCCCTGCTTTGGCTCGCGCACGGTGCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS TCA 72 bp CTGTCTCGGAACCCGTGGTCCTCCGCTTCATGTGAGTaGCGTCGTGGCGGGTCACTCACTCGGGGATCGCCG +
Preference number: 6 (lower is better)
Translates to: LSRNPWSSASCE*RRGGSLTRGSP
Trigger: CGGCGATCCCCGAGTGAGTGACCCGCCACGACGTCACTCACATGAAGCGGAGGACCACGGGTTCCGAGACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS TCA 72 bp GTGGCTGTCTCGGAACCCGTGGTCCTCCGCTTCATGTaGGTGACGTCGTGGCGGGTCACTCACTCGGGGATC +
Preference number: 6 (lower is better)
Translates to: VAVSEPVVLRFM*VTSWRVTHSGI
Trigger: GATCCCCGAGTGAGTGACCCGCCACGACGTCACTCACATGAAGCGGAGGACCACGGGTTCCGAGACAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS GCA 72 bp TACACAGGGCCCCAGCGCTGTCGCTGTGGCTGCTGCTaGCGCTACGGCTTAGTGCACCAGACGCTGCATTTC +
Preference number: 6 (lower is better)
Translates to: YTGPQRCRCGCC*RYGLVHQTLHF
Trigger: GAAATGCAGCGTCTGGTGCACTAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGGGGCCCTGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS GCA 72 bp TTCTACACAGGGCCCCAGCGCTGTCGCTGTGGCTGCTaGTGCCGCTACGGCTTAGTGCACCAGACGCTGCAT +
Preference number: 6 (lower is better)
Translates to: FYTGPQRCRCGC*CRYGLVHQTLH
Trigger: ATGCAGCGTCTGGTGCACTAAGCCGTAGCGGCAGCAGCAGCCACAGCGACAGCGCTGGGGCCCTGTGTAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS GCA 72 bp CACTCCTGGAACGCCGGGAGCTCAGACGCTGCCCTTTaGTCGCGAGCCAAGTCAGCCAAGGTTAACCTTCGC +
Preference number: 6 (lower is better)
Translates to: HSWNAGSSDAAL*SRAKSAKVNLR
Trigger: GCGAAGGTTAACCTTGGCTGACTTGGCTCGCGAGCAAAGGGCAGCGTCTGAGCTCCCGGCGTTCCAGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS CCA 72 bp GTTAACCTTCGCGGAACCCGGCGAGGAGCGCAAGCCTaGCCTTCCCCAAACACAGATCCGAGCTTTTCACCC +
Preference number: 6 (lower is better)
Translates to: VNLRGTRRGAQA*PSPNTDPSFSP
Trigger: GGGTGAAAAGCTCGGATCTGTGTTTGGGGAAGGCCAGGCTTGCGCTCCTCGCCGGGTTCCGCGAAGGTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS GCA 72 bp ACGTCGTGGCGGGTCACTCACTCGGGGATCGCCGATTaGGATCGTAGGGGTCTTCCTTCTCTAACTTGCCTC +
Preference number: 6 (lower is better)
Translates to: TSWRVTHSGIAD*DRRGLPSLTCL
Trigger: GAGGCAAGTTAGAGAAGGAAGACCCCTACGATCGCAATCGGCGATCCCCGAGTGAGTGACCCGCCACGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273980.10
CDS GCA 72 bp CGCTACGGCTTAGTGCACCAGACGCTGCATTTCAGGTaGTCCTACAAAAGAGGCCACTCCTGGAACGCCGGG +
Preference number: 6 (lower is better)
Translates to: RYGLVHQTLHFR*SYKRGHSWNAG
Trigger: CCCGGCGTTCCAGGAGTGGCCTCTTTTGTAGGAGCACCTGAAATGCAGCGTCTGGTGCACTAAGCCGTAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS CCA 72 bp CTGCATTTCAGGTGCTCCTACAAAAGAGGCCACTCCTaGAACGCCGGGAGCTCAGACGCTGCCCTTTGCTCG +
Preference number: 6 (lower is better)
Translates to: LHFRCSYKRGHS*NAGSSDAALCS
Trigger: CGAGCAAAGGGCAGCGTCTGAGCTCCCGGCGTTCCAGGAGTGGCCTCTTTTGTAGGAGCACCTGAAATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361687.8
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000507696.1
ENST00000509532.5
CDS TCA 72 bp CCGAATAGGAACAGCTCAGGTCTACAGCTCCCAGCCTaGGCGACGCAGAAGACAGGTGATTTCTGCATTTCC +
Preference number: 6 (lower is better)
Translates to: PNRNSSGLQLPA*ATQKTGDFCIS
Trigger: GGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCAGGCTGGGAGCTGTAGACCTGAGCTGTTCCTATTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS TCA 72 bp TCTACAGCTCCCAGCCTGAGCGACGCAGAAGACAGGTaGTTTCTGCATTTCCATTTGAGGTACCGGGTTCAT +
Preference number: 6 (lower is better)
Translates to: STAPSLSDAEDR*FLHFHLRYRVH
Trigger: ATGAACCCGGTACCTCAAATGGAAATGCAGAAATCACCTGTCTTCTGCGTCGCTCAGGCTGGGAGCTGTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511011.5
CDS CAA 90 bp TCTTTCTCTTGCCTGACTGCCCTGGCCAGAAAGTCCAAAACTATGTaGAATAGGAGTGGTGAGAGAGGGCATCCTTGTCCTGTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: SFSCLTALARKSKTM*NRSGERGHPCPVPV
Trigger: AACTGGCACAGGACAAGGATGCCCTCTCTCACCACTCCTATTCAACATAGTTTTGGACTTTCTGGCCAGGGCAGTCAGGCAAGAGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506615.1
CDS CCA 72 bp AAATGCAATCATCTGAGAGAAGACAGTCAGATACTCTaGACAATCGGGTCACTCCCACCCGAATACTGCGCT +
Preference number: 6 (lower is better)
Translates to: KCNHLREDSQIL*TIGSLPPEYCA
Trigger: AGCGCAGTATTCGGGTGGGAGTGACCCGATTGTCCAGAGTATCTGACTGTCTTCTCTCAGATGATTGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514689.5
CDS TCA 72 bp GCAGTCAGAGGGTTTGAAATCAGAAGGGTGAAGTGTTaGATAATTAGAAGCGTCAATTCTGCCACCAGCCCC +
Preference number: 6 (lower is better)
Translates to: AVRGFEIRRVKC*IIRSVNSATSP
Trigger: GGGGCTGGTGGCAGAATTGACGCTTCTAATTATTCAACACTTCACCCTTCTGATTTCAAACCCTCTGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509862.5
CDS TCA 72 bp AAGCTCCAAATTTTCCCACATTTTCATGTCTTCTTCTaGGCCCTCCAAACTGTTCCAACCTCAGCCTGTTAT +
Preference number: 6 (lower is better)
Translates to: KLQIFPHFHVFF*ALQTVPTSACY
Trigger: ATAACAGGCTGAGGTTGGAACAGTTTGGAGGGCTCAGAAGAAGACATGAAAATGTGGGAAAATTTGGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506384.1
CDS CAA 72 bp TCTTCTAAGATAATCTGTAATAGTCAAGAGGTTTGTTaGGTCCCTTCAGATTCAGAGGCTTCAGACTCAGAG +
Preference number: 6 (lower is better)
Translates to: SSKIICNSQEVC*VPSDSEASDSE
Trigger: CTCTGAGTCTGAAGCCTCTGAATCTGAAGGGACCAAACAAACCTCTTGACTATTACAGATTATCTTAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509862.5
CDS TCA 72 bp AATTTAATATGTCCCTTTCGGTCCAACAGGATATTATaGGGAGACAATGCCCTGTGTACTATACCATGTTTG +
Preference number: 6 (lower is better)
Translates to: NLICPFRSNRIL*GDNALCTIPCL
Trigger: CAAACATGGTATAGTACACAGGGCATTGTCTCCTCATAATATCCTGTTGGACCGAAAGGGACATATTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000506280.1
ENST00000509532.5
CDS CAA 72 bp TTTATAAAGGAAAGAGGTTTCACAGTTCAGCAATGCTaGGCAGGCTTCAGGAAACTTACAATCATGGTAGAA +
Preference number: 6 (lower is better)
Translates to: FIKERGFTVQQC*AGFRKLTIMVE
Trigger: TTCTACCATGATTGTAAGTTTCCTGAAGCCTGCCAAGCATTGCTGAACTGTGAAACCTCTTTCCTTTATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506384.1
CDS CAA 72 bp TTGGCTGTGGGTCCGTCACAAATAGCTCTTATTATGTaGAGATACATTCCATCAGTACCTAGTTTATTGAGA +
Preference number: 6 (lower is better)
Translates to: LAVGPSQIALIM*RYIPSVPSLLR
Trigger: TCTCAATAAACTAGGTACTGATGGAATGTATCTCAACATAATAAGAGCTATTTGTGACGGACCCACAGCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506615.1
CDS TCA 72 bp TGTACTATACCATGTTTGTTCATATACTGCAAGCCCTaGAGAACCTCAAATGCTATACACAAAACCGTTGAA +
Preference number: 6 (lower is better)
Translates to: CTIPCLFIYCKP*RTSNAIHKTVE
Trigger: TTCAACGGTTTTGTGTATAGCATTTGAGGTTCTTCAGGGCTTGCAGTATATGAACAAACATGGTATAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000273980.10
ENST00000394706.7
ENST00000394708.7
ENST00000467183.6
ENST00000506280.1
ENST00000509532.5
CDS CCA 72 bp AAAGAGGAATTCCCAAGTAGTAAGGTATCCCAGAGGTaGAAAATTTTGTGTAGTGGAAATACATATCTGGAA +
Preference number: 6 (lower is better)
Translates to: KEEFPSSKVSQR*KILCSGNTYLE
Trigger: TTCCAGATATGTATTTCCACTACACAAAATTTTCCACCTCTGGGATACCTTACTACTTGGGAATTCCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506615.1
ENST00000514689.5
CDS CAA 72 bp ATACTTTGTCCTTCATTAATTGATCTGGGGTTGGCCTaGAGAACATTTAAAATACAGAGCATGAATGAAAGT +
Preference number: 6 (lower is better)
Translates to: ILCPSLIDLGLA*RTFKIQSMNES
Trigger: ACTTTCATTCATGCTCTGTATTTTAAATGTTCTCAAGGCCAACCCCAGATCAATTAATGAAGGACAAAGTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510927.5