Pregenerated sensors for TBCCD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000113838Ensembl transcript IDs: ENST00000413695.1, ENST00000424280.5, ENST00000446782.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCTCTCCCACAATTGGTTGGTGCTGGGGAGGAAGCTCCTGATTGGTaGAAAGTCCGAGGAAGTGGGCAAGCCGGAGGGATTTCGTGTACC | + |
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Preference number: 5 (lower is better) Translates to: SLPQLVGAGEEAPDW*KVRGSGQAGGISCT Trigger: GGTACACGAAATCCCTCCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 90 bp | ACTTCTCTCCCACAATTGGTTGGTGCTGGGGAGGAAGCTCCTGATTaGTGGAAAGTCCGAGGAAGTGGGCAAGCCGGAGGGATTTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: TSLPQLVGAGEEAPD*WKVRGSGQAGGISC Trigger: ACACGAAATCCCTCCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGAGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 90 bp | GAAAACTTCTCTCCCACAATTGGTTGGTGCTGGGGAGGAAGCTCCTaGTTGGTGGAAAGTCCGAGGAAGTGGGCAAGCCGGAGGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: ENFSPTIGWCWGGSS*LVESPRKWASRRDF Trigger: GAAATCCCTCCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGAGAAGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 90 bp | TCGGCCGCTGTACCTCTGCTCCCTCATTCGGAGCGTAGCTGGGTATaGATGAAATTCCGGGCTTGTAGCACAGAGAAAACTTCTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SAAVPLLPHSERSWV*MKFRACSTEKTSLP Trigger: TGGGAGAGAAGTTTTCTCTGTGCTACAAGCCCGGAATTTCATTCATACCCAGCTACGCTCCGAATGAGGGAGCAGAGGTACAGCGGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 90 bp | CGTAAAATAAGAGGCCTAAGCAATGCGTCTGATGTACACCTGTCGTaGAATAACTGTTCCCGCTCATTCGGCCGCTGTACCTCTGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: RKIRGLSNASDVHLS*NNCSRSFGRCTSAP Trigger: GGGAGCAGAGGTACAGCGGCCGAATGAGCGGGAACAGTTATTCCACGACAGGTGTACATCAGACGCATTGCTTAGGCCTCTTATTTTACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413695.1 ENST00000424280.5 ENST00000446782.5 |
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| CDS TCA 90 bp | CCGCTGTACCTCTGCTCCCTCATTCGGAGCGTAGCTGGGTATGAATaGAATTCCGGGCTTGTAGCACAGAGAAAACTTCTCTCCCACAAT | + |
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Preference number: 5 (lower is better) Translates to: PLYLCSLIRSVAGYE*NSGLVAQRKLLSHN Trigger: ATTGTGGGAGAGAAGTTTTCTCTGTGCTACAAGCCCGGAATTTCATTCATACCCAGCTACGCTCCGAATGAGGGAGCAGAGGTACAGCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 72 bp | CCACAATTGGTTGGTGCTGGGGAGGAAGCTCCTGATTaGTGGAAAGTCCGAGGAAGTGGGCAAGCCGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: PQLVGAGEEAPD*WKVRGSGQAGG Trigger: CCCTCCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 72 bp | TCTCCCACAATTGGTTGGTGCTGGGGAGGAAGCTCCTaGTTGGTGGAAAGTCCGAGGAAGTGGGCAAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPTIGWCWGGSS*LVESPRKWASR Trigger: CCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 72 bp | CAATTGGTTGGTGCTGGGGAGGAAGCTCCTGATTGGTaGAAAGTCCGAGGAAGTGGGCAAGCCGGAGGGATT | + |
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Preference number: 6 (lower is better) Translates to: QLVGAGEEAPDW*KVRGSGQAGGI Trigger: AATCCCTCCGGCTTGCCCACTTCCTCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 72 bp | CCGGAGGGATTTCGTGTACCTCAGGTGCCCTCACTCTaGCCGGCCCCCTATCATTACGTAATTTTCTACGAC | + |
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Preference number: 6 (lower is better) Translates to: PEGFRVPQVPSL*PAPYHYVIFYD Trigger: GTCGTAGAAAATTACGTAATGATAGGGGGCCGGTCAGAGTGAGGGCACCTGAGGTACACGAAATCCCTCCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 72 bp | AGAGGCCTAAGCAATGCGTCTGATGTACACCTGTCGTaGAATAACTGTTCCCGCTCATTCGGCCGCTGTACC | + |
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Preference number: 6 (lower is better) Translates to: RGLSNASDVHLS*NNCSRSFGRCT Trigger: GGTACAGCGGCCGAATGAGCGGGAACAGTTATTCCACGACAGGTGTACATCAGACGCATTGCTTAGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413695.1 ENST00000424280.5 ENST00000446782.5 |
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| CDS CCA 72 bp | GGGCTTGTAGCACAGAGAAAACTTCTCTCCCACAATTaGTTGGTGCTGGGGAGGAAGCTCCTGATTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLVAQRKLLSHN*LVLGRKLLIGG Trigger: TCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGAGAAGTTTTCTCTGTGCTACAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CAA 90 bp | ATGAAATTCCGGGCTTGTAGCACAGAGAAAACTTCTCTCCCACAATaGGTTGGTGCTGGGGAGGAAGCTCCTGATTGGTGGAAAGTCCGA | + |
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Preference number: 6 (lower is better) Translates to: MKFRACSTEKTSLPQ*VGAGEEAPDWWKVR Trigger: TCGGACTTTCCACCAATCAGGAGCTTCCTCCCCAGCACCAACCAATTGTGGGAGAGAAGTTTTCTCTGTGCTACAAGCCCGGAATTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 72 bp | CTCTGCTCCCTCATTCGGAGCGTAGCTGGGTATGAATaGAATTCCGGGCTTGTAGCACAGAGAAAACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LCSLIRSVAGYE*NSGLVAQRKLL Trigger: GAGAAGTTTTCTCTGTGCTACAAGCCCGGAATTTCATTCATACCCAGCTACGCTCCGAATGAGGGAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS TCA 72 bp | GTACCTCTGCTCCCTCATTCGGAGCGTAGCTGGGTATaGATGAAATTCCGGGCTTGTAGCACAGAGAAAACT | + |
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Preference number: 6 (lower is better) Translates to: VPLLPHSERSWV*MKFRACSTEKT Trigger: AGTTTTCTCTGTGCTACAAGCCCGGAATTTCATTCATACCCAGCTACGCTCCGAATGAGGGAGCAGAGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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| CDS CCA 72 bp | AACTGTAGCGTGTCCACTGAAAGCACTAAGAAGCGGTaGAAGCCGAATCCGAACTTAAGTCGGTCTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: NCSVSTESTKKR*KPNPNLSRSVI Trigger: GATGACAGACCGACTTAAGTTCGGATTCGGCTTCCACCGCTTCTTAGTGCTTTCAGTGGACACGCTACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446782.5 |
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| CDS CCA 72 bp | GGTGAAAAGGCTTCTTTGCATACCACTAAGAAGCGGTaGAAGCCGAATCCGAACTTAAGTCGGTCTGTCATC | + |
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Preference number: 6 (lower is better) Translates to: GEKASLHTTKKR*KPNPNLSRSVI Trigger: GATGACAGACCGACTTAAGTTCGGATTCGGCTTCCACCGCTTCTTAGTGGTATGCAAAGAAGCCTTTTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000413695.1 ENST00000424280.5 |
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