Pregenerated sensors for TBCA (Homo sapiens)
Ensembl gene IDs: ENSG00000171530Ensembl transcript IDs: ENST00000306388.10, ENST00000522370.1, ENST00000651106.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTACAGGCATGAGCCACTaGACCTGGCGGCCAACATTA | + |
|
Preference number: 2 (lower is better) Translates to: QASSKYIVIPQVSHILFLTGMSH*TWRPTL Trigger: TAATGTTGGCCGCCAGGTGCAGTGGCTCATGCCTGT...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR GCA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATACAGGCATGAGCCACTaGACCTGGCGGCCAACATTA | + |
|
Preference number: 2 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDTGMSH*TWRPTL Trigger: TAATGTTGGCCGCCAGGTGCAGTGGCTCATGCCTGT...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTAGCTCCAAGTTAGTATaGGGGGACTACATAGATTAC | + |
|
Preference number: 2 (lower is better) Translates to: QASSKYIVIPQVSHILFLSSKLV*GDYIDY Trigger: GTAATCTATGTAGTCCCCTCATACTAACTTGGAGCT...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR TCA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCATTCCCCCTCTCAAACTaGTCTAGGTTTGAATGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VIISCFIYLLYHKAFIPAFPLSN*SRFECE Trigger: TTCACATTCAAACCTAGATCAGTTTGAGAGGGGGAA...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR TCA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCAAGCTCCAAGTTAGTATaGGGGGACTACATAGATTAC | + |
|
Preference number: 2 (lower is better) Translates to: VIISCFIYLLYHKAFIPASSKLV*GDYIDY Trigger: GTAATCTATGTAGTCCCCTCATACTAACTTGGAGCT...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTACTGACTATTCACAATaGCAAAGAAGGCTTCTGATG | + |
|
Preference number: 2 (lower is better) Translates to: QASSKYIVIPQVSHILFLTDYSQ*QRRLLM Trigger: CATCAGAAGCCTTCTTTGTCATTGTGAATAGTCAGT...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR-3UTR TCA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATGGTATAAAGGGCAAGTaGATAAGAAATACTGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDGIKGK*IRNTAN Trigger: GTTGGCAGTATTTCTTATTCACTTGCCCTTTATACC...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651106.1 |
||
| 3UTR-3UTR CAA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTAGGGCAGAGATATTGTaGAATACATCTTCACATACA | + |
|
Preference number: 3 (lower is better) Translates to: QASSKYIVIPQVSHILFLRAEIL*NTSSHT Trigger: TGTATGTGAAGATGTATTCAACAATATCTCTGCCCT...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATACATCACTTTTTCTTTaGCCAACCGCTTCACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDTSLFL*PTASPR Trigger: GCGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGT...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTTTCCCCCTCTCAAACTaGTCTAGGTTTGAATGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QASSKYIVIPQVSHILFLFPLSN*SRFECE Trigger: TTCACATTCAAACCTAGATCAGTTTGAGAGGGGGAA...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTGGTATAAAGGGCAAGTaGATAAGAAATACTGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QASSKYIVIPQVSHILFLGIKGK*IRNTAN Trigger: GTTGGCAGTATTTCTTATTCACTTGCCCTTTATACC...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | CAAGCCTCATCTAAATATATTGTAATTCCACAGGTTTCCCACATTCTGTTCCTTGACAAAGAAGGCTTCTaGTGTCACAACAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QASSKYIVIPQVSHILFLDKEGF*CHNRVK Trigger: TTTAACTCTGTTGTGACATCAGAAGCCTTCTTTGTC...AAGGAACAGAATGTGGGAAACCTGTGGAATTACAATATATTTAGATGAGGCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATGACAAAGAAGGCTTCTaGTGTCACAACAGAGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDDKEGF*CHNRVK Trigger: TTTAACTCTGTTGTGACATCAGAAGCCTTCTTTGTC...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCAACTGACTATTCACAATaGCAAAGAAGGCTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VIISCFIYLLYHKAFIPATDYSQ*QRRLLM Trigger: CATCAGAAGCCTTCTTTGTCATTGTGAATAGTCAGT...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR TCA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATACTGACTATTCACAATaGCAAAGAAGGCTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDTDYSQ*QRRLLM Trigger: CATCAGAAGCCTTCTTTGTCATTGTGAATAGTCAGT...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| 3UTR CAA 72 bp | TTTCTTAAACCTCCATGTTATACCTTAAACACATCTTaGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLKPPCYTLNTS*FSVSKYKLFKG Trigger: GCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAAGGTATAACATGGAGGTTTAAGAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS CCA 90 bp | GAAAATCCTGCCTTGAAATCCCAAGCTCTTTTTGCCGCAACCGCCTaGTTCTCCGTCCCGCTGAGGGCCACAGAAGCACGTTTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ENPALKSQALFAATA*FSVPLRATEARLQA Trigger: AGCCTGCAAACGTGCTTCTGTGGCCCTCAGCGGGACGGAGAACCAGGCGGTTGCGGCAAAAAGAGCTTGGGATTTCAAGGCAGGATTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000522370.1 |
||
| CDS-3UTR CAA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATTACATCACTTTTTCTTaGACCAACCGCTTCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDYITFS*TNRFTT Trigger: CGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTA...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR CAA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCATACATCACTTTTTCTTaGACCAACCGCTTCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: VIISCFIYLLYHKAFIPAYITFS*TNRFTT Trigger: CGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTA...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR CAA 90 bp | TTAAACACATCTTTGTTCTCTGTTAGTAAATACAAGCTCTTCAAGGGCAGAGATAGGGCAGAGATATTGTaGAATACATCTTCACATACA | + |
|
Preference number: 5 (lower is better) Translates to: LNTSLFSVSKYKLFKGRDRAEIL*NTSSHT Trigger: TGTATGTGAAGATGTATTCAACAATATCTCTGCCCT...ATCTCTGCCCTTGAAGAGCTTGTATTTACTAACAGAGAACAAAGATGTGTTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR CAA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCAAGGGCAGAGATATTGTaGAATACATCTTCACATACA | + |
|
Preference number: 5 (lower is better) Translates to: VIISCFIYLLYHKAFIPARAEIL*NTSSHT Trigger: TGTATGTGAAGATGTATTCAACAATATCTCTGCCCT...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS-3UTR CAA 90 bp | GTTATTATTTCCTGCTTTATCTACCTTCTGTATCACAAGGCATTTATACCAGCATCAAGGGCAGAGATATaGTTGAATACATCTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: VIISCFIYLLYHKAFIPASRAEI*LNTSSH Trigger: ATGTGAAGATGTATTCAACAATATCTCTGCCCTTGA...TGCTGGTATAAATGCCTTGTGATACAGAAGGTAGATAAAGCAGGAAATAATAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000306388.10 ENST00000651106.1 |
||
| CDS CCA 72 bp | GCCTTGAAATCCCAAGCTCTTTTTGCCGCAACCGCCTaGTTCTCCGTCCCGCTGAGGGCCACAGAAGCACGT | + |
|
Preference number: 6 (lower is better) Translates to: ALKSQALFAATA*FSVPLRATEAR Trigger: ACGTGCTTCTGTGGCCCTCAGCGGGACGGAGAACCAGGCGGTTGCGGCAAAAAGAGCTTGGGATTTCAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000522370.1 |
||