RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D8B (Homo sapiens)

Ensembl gene IDs: ENSG00000133138

Ensembl transcript IDs: ENST00000276175.7, ENST00000310452.6, ENST00000357242.10, ENST00000460545.1, ENST00000481617.6

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAAGGCTGACTGTACCAACTCCCTCCAAGAAAGGGAGACCTCTTaGGTCACTCTGAAGGAGGTCTGCCCTTTCATGGTTTCACATCTA +
Preference number: 1 (lower is better)
Translates to: PKADCTNSLQERETS*VTLKEVCPFMVSHL
Trigger: TAGATGTGAAACCATGAAAGGGCAGACCTCCTTCAGAGTGACTCAAGAGGTCTCCCTTTCTTGGAGGGAGTTGGTACAGTCAGCCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR TCA 90 bp GCCCCATGTGTTAAGCTTTGTTCACAGTGGATTCTTCCCAAAGGCTaGCTGTACCAACTCCCTCCAAGAAAGGGAGACCTCTTGAGTCAC +
Preference number: 1 (lower is better)
Translates to: APCVKLCSQWILPKG*LYQLPPRKGDLLSH
Trigger: GTGACTCAAGAGGTCTCCCTTTCTTGGAGGGAGTTGGTACAGTCAGCCTTTGGGAAGAATCCACTGTGAACAAAGCTTAACACATGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR GCA 90 bp AGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTaGTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACAAG +
Preference number: 1 (lower is better)
Translates to: SANKAHYQQQRNDAL*FWIYILAFRHIGNK
Trigger: CTTGTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR CCA 90 bp TCTATTCTCTTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTaGCTCTCTGTTTGTCTGTTATTGGTGTATAAGAATGCTTGTGAT +
Preference number: 1 (lower is better)
Translates to: SILFEAIVNGSSLMI*LSVCLLLVYKNACD
Trigger: ATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAAGAGAATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR TCA 90 bp GGTTTTCTAGATATACAATCATGTCGTCTGCAAACAGGGACAATTTaGCTTCCTCTTTTCCTAATTGAATACTCTTTATTTCCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: GFLDIQSCRLQTGTI*LPLFLIEYSLFPSP
Trigger: AGGAGAAGGAAATAAAGAGTATTCAATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTGCAGACGACATGATTGTATATCTAGAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR TCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGGTAGAATTCGGCTGTaGATCCATCTGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPGRIRL*IHLVLG
Trigger: GCCCAGGACCAGATGGATTCACAGCCGAATTCTACC...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGGCTGGCCTCATAAAATaGGTTAGGGAGGATTCCCTC +
Preference number: 2 (lower is better)
Translates to: SFSCLIALARTSNTMLNRAGLIK*VREDSL
Trigger: GAGGGAATCCTCCCTAACCCATTTTATGAGGCCAGC...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR GCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAATAAGCTTTTTGATGTaGTGCTGGATTCGGCTTGCC +
Preference number: 2 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPISFLM*CWIRLA
Trigger: GGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTAT...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CCA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATGGCTGTGAATCCATCTaGTCCTGGGCTCTTTTTCGT +
Preference number: 2 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYGCESI*SWALFR
Trigger: ACGAAAAAGAGCCCAGGACCAGATGGATTCACAGCC...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR TCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGCCTTCTGCTAGCTTTTaGAAGTGTTTGCTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: SFSCLIALARTSNTMLNRPSASF*KCLLLL
Trigger: AAGCAAGAGCAAACACTTTCAAAAGCTAGCAGAAGG...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR GCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGCTGCTGGATTCGGCTTaGCAGTATTTTATTGAGGAT +
Preference number: 2 (lower is better)
Translates to: SFSCLIALARTSNTMLNRLLDSA*QYFIED
Trigger: ATCCTCAATAAAATACTGGCAAGCCGAATCCAGCAG...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR GCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAAAATTGCTATGTCTTTaGAACAGTAAGAGGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPKLLCL*NSKRSP
Trigger: AGGACTCCTCTTACTGTTGCAAAGACATAGCAATTT...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCATTAGGGTGTCAATTTTaGATCTTTCCTGATTTCTCT +
Preference number: 2 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPLGCQF*IFPDFS
Trigger: AGAGAAATCAGGAAAGATCCAAAATTGACACCCTAA...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR GCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTAGCTTTTTGATGTGCTaGTGGATTCGGCTTGCCAGT +
Preference number: 2 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFSFLMC*WIRLAS
Trigger: ACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCT...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CCA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAGATTCAACTTCTTCCTaGTTTAGTCTTGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRDSTSS*FSLGRV
Trigger: CACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATC...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 90 bp GCTGTGAATCCATCTGGTCCTGGGCTCTTTTTCGTTGTTAAGCTATaGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGA +
Preference number: 2 (lower is better)
Translates to: AVNPSGPGLFFVVKL*IIATISAPVIGLFR
Trigger: TCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAACAACGAAAAAGAGCCCAGGACCAGATGGATTCACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTTTTTTGATGTGCTGCTaGATTCGGCTTGCCAGTATT +
Preference number: 2 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFFLMCC*IRLASI
Trigger: AATACTGGCAAGCCGAATCCAGCAGCACATCAAAAA...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCAACAAGATAAATCCCTaGGCCCTACTCACAGGAATC +
Preference number: 2 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLNKINP*ALLTGI
Trigger: GATTCCTGTGAGTAGGGCTCAGGGATTTATCTTGTT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR GCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCACTCTGAAGGAGGTCTaGCCTTTCATGGTTTCACAT +
Preference number: 2 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLTLKEV*PFMVSH
Trigger: ATGTGAAACCATGAAAGGGCAGACCTCCTTCAGAGT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTCAAACAGGGACAATTTaGCTTCCTCTTTTCCTAATT +
Preference number: 2 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFQTGTI*LPLFLI
Trigger: AATTAGGAAAAGAGGAAGTCAAATTGTCCCTGTTTG...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 90 bp AAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATaGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAAC +
Preference number: 2 (lower is better)
Translates to: KSANKAHYQQQRNDA*CFWIYILAFRHIGN
Trigger: GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR CAA 90 bp GATTTCTCCCCCTATTTTCTAAGTCAATTGATTAATAAATTGTCCTaGGTAGGAATAGCACAGGACAGTGGACAAGTATGGTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: DFSPYFLSQLINKLS*VGIAQDSGQVWFAF
Trigger: AAAAGCAAACCATACTTGTCCACTGTCCTGTGCTATTCCTACCAAGGACAATTTATTAATCAATTGACTTAGAAAATAGGGGGAGAAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCAGAAAGAAGCTCCAATaGATGATTTCTCCCCCTATT +
Preference number: 2 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLRKKLQ*MISPPI
Trigger: AATAGGGGGAGAAATCATTCATTGGAGCTTCTTTCT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR CCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTCTGTTTGTCTGTTATTaGTGTATAAGAATGCTTGTG +
Preference number: 2 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFLFVCY*CIRMLV
Trigger: CACAAGCATTCTTATACACCAATAACAGACAAACAG...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 90 bp ATGAATGATTTCTCCCCCTATTTTCTAAGTCAATTGATTAATAAATaGTCCTTGGTAGGAATAGCACAGGACAGTGGACAAGTATGGTTT +
Preference number: 2 (lower is better)
Translates to: MNDFSPYFLSQLINK*SLVGIAQDSGQVWF
Trigger: AAACCATACTTGTCCACTGTCCTGTGCTATTCCTACCAAGGACAATTTATTAATCAATTGACTTAGAAAATAGGGGGAGAAATCATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR CCA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTATTGAGATAATCATGTaGTTTTTGTCTTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIIEIIM*FLSLAL
Trigger: CAGAGCCAAAGACAAAAACCACATGATTATCTCAAT...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR TCA 72 bp GACTGTACCAACTCCCTCCAAGAAAGGGAGACCTCTTaGGTCACTCTGAAGGAGGTCTGCCCTTTCATGGTT +
Preference number: 3 (lower is better)
Translates to: DCTNSLQERETS*VTLKEVCPFMV
Trigger: AACCATGAAAGGGCAGACCTCCTTCAGAGTGACTCAAGAGGTCTCCCTTTCTTGGAGGGAGTTGGTACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR TCA 72 bp GTTAAGCTTTGTTCACAGTGGATTCTTCCCAAAGGCTaGCTGTACCAACTCCCTCCAAGAAAGGGAGACCTC +
Preference number: 3 (lower is better)
Translates to: VKLCSQWILPKG*LYQLPPRKGDL
Trigger: GAGGTCTCCCTTTCTTGGAGGGAGTTGGTACAGTCAGCCTTTGGGAAGAATCCACTGTGAACAAAGCTTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR TCA 72 bp CCAGTTCCTCCTTGTACCTCTGGTAGAATTCGGCTGTaGATCCATCTGGTCCTGGGCTCTTTTTCGTTGTTA +
Preference number: 3 (lower is better)
Translates to: PVPPCTSGRIRL*IHLVLGSFSLL
Trigger: TAACAACGAAAAAGAGCCCAGGACCAGATGGATTCACAGCCGAATTCTACCAGAGGTACAAGGAGGAACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR TCA 72 bp CATCTGGTCCTGGGCTCTTTTTCGTTGTTAAGCTATTaGTTATTGCCACAATTTCAGCTCCTGTTATTGGTC +
Preference number: 3 (lower is better)
Translates to: HLVLGSFSLLSY*LLPQFQLLLLV
Trigger: GACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAACAACGAAAAAGAGCCCAGGACCAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR TCA 72 bp GTTTTAGACATGAAGTCCTTGCCCATGCCTATGTACTaGATGGTAACGCCTAGGTTTTCTTCTAGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: VLDMKSLPMPMY*MVTPRFSSRVF
Trigger: AAAAACCCTAGAAGAAAACCTAGGCGTTACCATTCAGTACATAGGCATGGGCAAGGACTTCATGTCTAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CAA 90 bp GGAGGTCTGCCCTTTCATGGTTTCACATCTAGAAAAGTCAAAAGGCTTATAACCTTTCAGTTAGATAACTaGAAAACAAGGGCCCCAAAT +
Preference number: 3 (lower is better)
Translates to: GGLPFHGFTSRKVKRLITFQLDN*KTRAPN
Trigger: ATTTGGGGCCCTTGTTTTCAAGTTATCTAACTGAAA...GGTTATAAGCCTTTTGACTTTTCTAGATGTGAAACCATGAAAGGGCAGACCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR CAA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGACAGACAGGTTTAAAATaGCTATGTCTTTGCAACAGT +
Preference number: 3 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRQTGLK*LCLCNS
Trigger: ACTGTTGCAAAGACATAGCAATTTTAAACCTGTCTG...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR-3UTR CAA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTATTGATTTGTGTATATaGAACCAGCCTTGCATCCCA +
Preference number: 3 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFIDLCI*NQPCIP
Trigger: TGGGATGCAAGGCTGGTTCAATATACACAAATCAAT...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CCA 72 bp TTCTCCTTGAAGAGGTCCTTCACATCCCTTGTAAGTTaGATTCCTAGGTATTCTATTCTCTTTGAAGCAATT +
Preference number: 3 (lower is better)
Translates to: FSLKRSFTSLVS*IPRYSILFEAI
Trigger: AATTGCTTCAAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTTCAAGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR GCA 72 bp CAACACAAGCTAGTAATTTCCTTACTAAAAGTGATATaGTTGTGCCCTCTGGTGGTAACATTTAGCATATTC +
Preference number: 3 (lower is better)
Translates to: QHKLVISLLKVI*LCPLVVTFSIF
Trigger: GAATATGCTAAATGTTACCACCAGAGGGCACAAGCATATCACTTTTAGTAAGGAAATTACTAGCTTGTGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCATTAATAAATTGTCCTaGGTAGGAATAGCACAGGAC +
Preference number: 3 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLINKLS*VGIAQD
Trigger: GTCCTGTGCTATTCCTACCAAGGACAATTTATTAAT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR GCA 72 bp AAAGCCCATTATCAACAACAAAGGAATGATGCATTGTaGTTCTGGATATATATTTTGGCCTTCAGACACATT +
Preference number: 3 (lower is better)
Translates to: KAHYQQQRNDAL*FWIYILAFRHI
Trigger: AATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR CCA 72 bp TTTGAAGCAATTGTGAATGGGAGTTCACTCATGATTTaGCTCTCTGTTTGTCTGTTATTGGTGTATAAGAAT +
Preference number: 3 (lower is better)
Translates to: FEAIVNGSSLMI*LSVCLLLVYKN
Trigger: ATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGACATCGCGAACTTTGTaGCCCCCGGGAGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: SFSCLIALARTSNTMLNRTSRTL*PPGAVT
Trigger: GGTCACTGCTCCCGGGGGGCACAAAGTTCGCGATGT...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 72 bp TGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTaGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CLIALARTSNTM*NRSGERGHPCL
Trigger: AAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAAGTAGAGTCCAAGACTaGATCAAGAGTCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPSRVQD*IKSPNQ
Trigger: CTGGTTGGGACTCTTGATTCAGTCTTGGACTCTACT...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGCCTTGGGAACACACGTaGATACTCTCTGTCAGTATG +
Preference number: 4 (lower is better)
Translates to: SFSCLIALARTSNTMLNRPWEHT*ILSVSM
Trigger: CATACTGACAGAGAGTATTCACGTGTGTTCCCAAGG...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAATCATGATATTGAGTTaGAGCTGCTCCGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPIMILS*SCSASE
Trigger: CTCAGATGCGGAGCAGCTTCAACTCAATATCATGAT...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTGGCAGACTGGGGTCATaGTGCTTCAATACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSGRLGS*CFNTGQ
Trigger: TTGCCCAGTATTGAAGCATCATGACCCCAGTCTGCC...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGGGTAGAATTCGGCTGTaGATCCATCTGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LFRDSTSSWFSLGRVYVSGRIRL*IHLVLG
Trigger: GCCCAGGACCAGATGGATTCACAGCCGAATTCTACC...CGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATACATCGCGAACTTTGTaGCCCCCGGGAGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYTSRTL*PPGAVT
Trigger: GGTCACTGCTCCCGGGGGGCACAAAGTTCGCGATGT...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCACATCGCGAACTTTGTaGCCCCCGGGAGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGTSRTL*PPGAVT
Trigger: GGTCACTGCTCCCGGGGGGCACAAAGTTCGCGATGT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAATGATTACACTACACTaGTTGCCATCTTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPMITLH*LPSWLA
Trigger: TGCTAGCCAAGATGGCAATCAGTGTAGTGTAATCAT...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTCAGGGACTCAACAAGTaGTACAACGCTCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSQGLNK*YNALNC
Trigger: GCAGTTCAGAGCGTTGTATCACTTGTTGAGTCCCTG...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTGCACGAAGTAGTCGTTaGACCTTTCCATCAGCCACA +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSARSSR*TFPSAT
Trigger: TGTGGCTGATGGAAAGGTCCAACGACTACTTCGTGC...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGATGCCAGTATCACTCTaGAAGGCTGGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRMPVSL*KAGCSG
Trigger: GCCTGAGCACCCAGCCTTTCAGAGTGATACTGGCAT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATAGCTTTTTGATGTGCTaGTGGATTCGGCTTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYSFLMC*WIRLAS
Trigger: ACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCT...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCGCACGAAGTAGTCGTTaGACCTTTCCATCAGCCACA +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVARSSR*TFPSAT
Trigger: TGTGGCTGATGGAAAGGTCCAACGACTACTTCGTGC...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAGCACGAAGTAGTCGTTaGACCTTTCCATCAGCCACA +
Preference number: 4 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRARSSR*TFPSAT
Trigger: TGTGGCTGATGGAAAGGTCCAACGACTACTTCGTGC...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCATCACTCTGAAAGGCTaGGTGCTCAGGCAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGITLKG*VLRQRA
Trigger: CGCTCTCTGCCTGAGCACCCAGCCTTTCAGAGTGAT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAGCTGGCCTCATAAAATaGGTTAGGGAGGATTCCCTC +
Preference number: 4 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRAGLIK*VREDSL
Trigger: GAGGGAATCCTCCCTAACCCATTTTATGAGGCCAGC...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGTTTTTGATGTGCTGCTaGATTCGGCTTGCCAGTATT +
Preference number: 4 (lower is better)
Translates to: SFSCLIALARTSNTMLNRFLMCC*IRLASI
Trigger: AATACTGGCAAGCCGAATCCAGCAGCACATCAAAAA...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCAGTAGAGTCCAAGACTaGATCAAGAGTCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVSRVQD*IKSPNQ
Trigger: CTGGTTGGGACTCTTGATTCAGTCTTGGACTCTACT...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCCCTTGGGAACACACGTaGATACTCTCTGTCAGTATG +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVPWEHT*ILSVSM
Trigger: CATACTGACAGAGAGTATTCACGTGTGTTCCCAAGG...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACATGCCAGTATCACTCTaGAAGGCTGGGTGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNMPVSL*KAGCSG
Trigger: GCCTGAGCACCCAGCCTTTCAGAGTGATACTGGCAT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTTCTTTATTTGCAGAATaGGCCCAGGGACTCAACAAG +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSSLFAE*AQGLNK
Trigger: CTTGTTGAGTCCCTGGGCTCATTCTGCAAATAAAGA...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTCCTCTTGAGTCACTCTaGAGGAGGTCTGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGPLESL*RRSALS
Trigger: TGAAAGGGCAGACCTCCTTCAGAGTGACTCAAGAGG...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp ATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGACTATGAATTCCTCTTaGAGAATGGGCTACACTAAA +
Preference number: 4 (lower is better)
Translates to: IALARTSNTMLNRSGERGTMNSS*RMGYTK
Trigger: TTTAGTGTAGCCCATTCTTCAAGAGGAATTCATAGT...CCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATGTTGCCTGTTCACTCTaGTGGTTGTTTCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYVACSL*WLFLLL
Trigger: CAGCAAAAGAAACAACCATCAGAGTGAACAGGCAAC...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp GGAGGTCTGCCCTTTCATGGTTTCACATCTAGAAAAGTCAAAAGGCTTATAACCAAGTTCTTCAAAGACTaGCTGATCCACCAAGGCACC +
Preference number: 4 (lower is better)
Translates to: GGLPFHGFTSRKVKRLITKFFKD*LIHQGT
Trigger: GGTGCCTTGGTGGATCAGGCAGTCTTTGAAGAACTT...GGTTATAAGCCTTTTGACTTTTCTAGATGTGAAACCATGAAAGGGCAGACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp CACAAACAGCAGTGCCCAGAATTTCTAGTGATGTCTCGGTCTAATGAAAGACCTTGCTTCCTTCTCATTTaGAGGCTTGGAAACATGCAG +
Preference number: 4 (lower is better)
Translates to: HKQQCPEFLVMSRSNERPCFLLI*RLGNMQ
Trigger: CTGCATGTTTCCAAGCCTGCAAATGAGAAGGAAGCA...AGGTCTTTCATTAGACCGAGACATCACTAGAAATTCTGGGCACTGCTGTTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAATCACTCTGAAAGGCTaGGTGCTCAGGCAGAGAGCG +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQITLKG*VLRQRA
Trigger: CGCTCTCTGCCTGAGCACCCAGCCTTTCAGAGTGAT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGATTCCTCTTGAAGAATaGGCTACACTAAACACACAC +
Preference number: 4 (lower is better)
Translates to: SFSCLIALARTSNTMLNRIPLEE*ATLNTH
Trigger: GTGTGTGTTTAGTGTAGCCCATTCTTCAAGAGGAAT...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp CACAAACAGCAGTGCCCAGAATTTCTAGTGATGTCTCGGTCTAATGAAAGACCTATGATTACACTACACTaGTTGCCATCTTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: HKQQCPEFLVMSRSNERPMITLH*LPSWLA
Trigger: TGCTAGCCAAGATGGCAATCAGTGTAGTGTAATCAT...AGGTCTTTCATTAGACCGAGACATCACTAGAAATTCTGGGCACTGCTGTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGACCTCTCGTAGTGGAATaGTTACACTACACTGATTGC +
Preference number: 4 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRPLVVE*LHYTDC
Trigger: GCAATCAGTGTAGTGTAATCATTCCACTACGAGAGG...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAGGCAGACTGGGGTCATaGTGCTTCAATACTGGGCAA +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQGRLGS*CFNTGQ
Trigger: TTGCCCAGTATTGAAGCATCATGACCCCAGTCTGCC...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTGCTGGCAGTCAATCTaGTACTGTTCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVCWQSI*YCSKYG
Trigger: GCCATATTTGGAACAGTATCAGATTGACTGCCAGCA...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCCAGGGACTCAACAAGTaGTACAACGCTCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGQGLNK*YNALNC
Trigger: GCAGTTCAGAGCGTTGTATCACTTGTTGAGTCCCTG...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGATTCTTCCCAAAGGCTaGCTGTACCAACTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRILPKG*LYQLPP
Trigger: TGGAGGGAGTTGGTACAGTCAGCCTTTGGGAAGAAT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATCCTTCTGCTAGCTTTTaGAAGTGTTTGCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYPSASF*KCLLLL
Trigger: AAGCAAGAGCAAACACTTTCAAAAGCTAGCAGAAGG...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTTCTGAGCCTGAGTTTTaGTACCAGTTGTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSSEPEF*YQLFKV
Trigger: GACTTTGAACAACTGGTAGCAAAACTCAGGCTCAGA...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTTTTGGGATTCCTGTATaGATAAGCTGTGAGTACCCT +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSFGIPV*ISCEYP
Trigger: AGGGTACTCACAGCTTATGCATACAGGAATCCCAAA...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAGTAGAGTCCAAGACTaGATCAAGAGTCCCAACCAG +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGSRVQD*IKSPNQ
Trigger: CTGGTTGGGACTCTTGATTCAGTCTTGGACTCTACT...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCGGCTCCACATGCAATTaGCAAGTAAACTTGAGAATC +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVGSTCN*QVNLRI
Trigger: GATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCC...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATCCTTGGGAACACACGTaGATACTCTCTGTCAGTATG +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYPWEHT*ILSVSM
Trigger: CATACTGACAGAGAGTATTCACGTGTGTTCCCAAGG...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTGTATGCATAAGCTGTaGGTACCCTTCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRCMHKL*VPFSEQ
Trigger: CTGCTCTGAGAAGGGTACTCACAGCTTATGCATACA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTCTTCAAAGACTGCCTaGTCCACCAAGGCACCAATA +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRSSKTA*STKAPI
Trigger: TATTGGTGCCTTGGTGGATCAGGCAGTCTTTGAAGA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCCAACTTCTTCCATCCTaGGTAAAAGGCTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVQLLPS*VKGWLQ
Trigger: TTGTAACCAGCCTTTTACTCAGGATGGAAGAAGTTG...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCCTGTTCAAATGCAAATaGCCACTGAGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGLFKCK*PLRFLP
Trigger: AGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAG...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCGAAAGGGAGACCTCTTaGGTCACTCTGAAGGAGGTC +
Preference number: 4 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLERETS*VTLKEV
Trigger: GACCTCCTTCAGAGTGACTCAAGAGGTCTCCCTTTC...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp CTATTCAGAGATTCAACTTCTTCCTGGTTTAGTCTTGGGAGAGTGTATGTGTCGTCTGAGCCTGAGTTTTaGTACCAGTTGTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LFRDSTSSWFSLGRVYVSSEPEF*YQLFKV
Trigger: GACTTTGAACAACTGGTAGCAAAACTCAGGCTCAGA...CGACACATACACTCTCCCAAGACTAAACCAGGAAGAAGTTGAATCTCTGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAAGTTCTTCAAAGACTaGCTGATCCACCAAGGCACC +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGKFFKD*LIHQGT
Trigger: GGTGCCTTGGTGGATCAGGCAGTCTTTGAAGAACTT...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CACAAACAGCAGTGCCCAGAATTTCTAGTGATGTCTCGGTCTAATGAAAGACCTAAAGTGATATGCTTGTaGCCTCTGGTGGTAACATTT +
Preference number: 4 (lower is better)
Translates to: HKQQCPEFLVMSRSNERPKVICL*PLVVTF
Trigger: AAATGTTACCACCAGAGGGCACAAGCATATCACTTT...AGGTCTTTCATTAGACCGAGACATCACTAGAAATTCTGGGCACTGCTGTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTACCAATCCCAATGCTTaGTTATTTCTTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSTNPNA*LFLLCW
Trigger: CCAACAGAGAAGAAATAACCAAGCATTGGGATTGGT...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp CACAAACAGCAGTGCCCAGAATTTCTAGTGATGTCTCGGTCTAATGAAAGACCTACCAATCCCAATGCTTaGTTATTTCTTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HKQQCPEFLVMSRSNERPTNPNA*LFLLCW
Trigger: CCAACAGAGAAGAAATAACCAAGCATTGGGATTGGT...AGGTCTTTCATTAGACCGAGACATCACTAGAAATTCTGGGCACTGCTGTTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCCCAAATATGGCAGACTaGGGTCATGATGCTTCAATA +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVPNMAD*GHDASI
Trigger: TATTGAAGCATCATGACCCCAGTCTGCCATATTTGG...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGTTAGGGTGTCAATTTTaGATCTTTCCTGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFSCLIALARTSNTMLNRLGCQF*IFPDFS
Trigger: AGAGAAATCAGGAAAGATCCAAAATTGACACCCTAA...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp ATTGGAATAGTTTCAGAAGGAATGGTACCAGTTCCTCCTTGTACCTCTGGTAGAAGCTTAAGGAGATTTTaGGCTGAGACTATGGGGTTT +
Preference number: 4 (lower is better)
Translates to: IGIVSEGMVPVPPCTSGRSLRRF*AETMGF
Trigger: AAACCCCATAGTCTCAGCCCAAAATCTCCTTAAGCT...TCTACCAGAGGTACAAGGAGGAACTGGTACCATTCCTTCTGAAACTATTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 72 bp TGCGTAGAGGTGTTTGTAGTATTCTCTGATGGTAGTTaGTATTTCTGTGGGATTGGTCGTGATATCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CVEVFVVFSDGS*YFCGIGRDIPF
Trigger: AAAGGGGATATCACGACCAATCCCACAGAAATACAAACTACCATCAGAGAATACTACAAACACCTCTACGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 72 bp CCATCTGGTCCTGGGCTCTTTTTCGTTGTTAAGCTATaGATTATTGCCACAATTTCAGCTCCTGTTATTGGT +
Preference number: 4 (lower is better)
Translates to: PSGPGLFFVVKL*IIATISAPVIG
Trigger: ACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAACAACGAAAAAGAGCCCAGGACCAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCATCATGATATTGAGTTaGAGCTGCTCCGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGIMILS*SCSASE
Trigger: CTCAGATGCGGAGCAGCTTCAACTCAATATCATGAT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATTTACTGCATTCCCTCTaGCTTGTCAAAGATTGCACC +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYLLHSL*LVKDCT
Trigger: GGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAA...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTGTATGCATAAGCTGTaGGTACCCTTCTCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDCMHKL*VPFSEQ
Trigger: CTGCTCTGAGAAGGGTACTCACAGCTTATGCATACA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCACATTTGAACCTTGCTaGACATTTGAAGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVTFEPC*TFEGNG
Trigger: TCCATTGCCTTCAAATGTTCAGCAAGGTTCAAATGT...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTGCTGGCAGTCAATCTaGTACTGTTCCAAATATGGC +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRCWQSI*YCSKYG
Trigger: GCCATATTTGGAACAGTATCAGATTGACTGCCAGCA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACAGTGATACAACGCTCTaGACTGCTGGCAGTCAATCT +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNSDTTL*TAGSQS
Trigger: AGATTGACTGCCAGCAGTTCAGAGCGTTGTATCACT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGAGGGCTGTGTTTTGCTaGTTCTGCTTCCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRRAVFC*FCFLLI
Trigger: AATGAGAAGGAAGCAGAATCAGCAAAACACAGCCCT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACCTGTTCAAATGCAAATaGCCACTGAGGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNLFKCK*PLRFLP
Trigger: AGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAG...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATAACAAGATAAATCCCTaGGCCCTACTCACAGGAATC +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYNKINP*ALLTGI
Trigger: GATTCCTGTGAGTAGGGCTCAGGGATTTATCTTGTT...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACAAGATAAATCCCTaGGCCCTACTCACAGGAATC +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGNKINP*ALLTGI
Trigger: GATTCCTGTGAGTAGGGCTCAGGGATTTATCTTGTT...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTTATCAATTTTCCCTTTaGCTTTTTCAGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSYQFSL*LFQGCV
Trigger: AACACAGCCCTGAAAAAGGCAAAGGGAAAATTGATA...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTACTCTGAAGGAGGTCTaGCCTTTCATGGTTTCACAT +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGTLKEV*PFMVSH
Trigger: ATGTGAAACCATGAAAGGGCAGACCTCCTTCAGAGT...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTTAAATTGCTCACTGTaGGCTCTATTTTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVLNCSL*ALFSRP
Trigger: AGGTCTGGAAAATAGAGCCCACAGTGAGCAATTTAA...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp GTTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAGGCTGTGAATCCATCTaGTCCTGGGCTCTTTTTCGT +
Preference number: 4 (lower is better)
Translates to: VKLLIIATISAPVIGLFRGCESI*SWALFR
Trigger: ACGAAAAAGAGCCCAGGACCAGATGGATTCACAGCC...TCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp CCTGGGCTCTTTTTCGTTGTTAAGCTATTGATTATTGCCACAATTTCAGCTCCTAGTCTTTTCAAGTTTTaGGACTTCATCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PGLFFVVKLLIIATISAPSLFKF*DFIPGD
Trigger: ATCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACT...AGGAGCTGAAATTGTGGCAATAATCAATAGCTTAACAACGAAAAAGAGCCCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCGCAGATATAATTTTCTaGGATGCACATTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVADIIF*DAHFPM
Trigger: CATGGGAAAATGTGCATCTCAGAAAATTATATCTGC...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCATGATTACACTACACTaGTTGCCATCTTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGMITLH*LPSWLA
Trigger: TGCTAGCCAAGATGGCAATCAGTGTAGTGTAATCAT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACCCTCTCGTAGTGGAATaGTTACACTACACTGATTGC +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNPLVVE*LHYTDC
Trigger: GCAATCAGTGTAGTGTAATCATTCCACTACGAGAGG...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACATCATGATATTGAGTTaGAGCTGCTCCGCATCTGAG +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNIMILS*SCSASE
Trigger: CTCAGATGCGGAGCAGCTTCAACTCAATATCATGAT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCGTCATTAACAGCACCTaGAAAAAGCATCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGVINST*KKHPEF
Trigger: GAACTCTGGATGCTTTTTTCAGGTGCTGTTAATGAC...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTTCTTCAAAGACTGCCTaGTCCACCAAGGCACCAATA +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILSSKTA*STKAPI
Trigger: TATTGGTGCCTTGGTGGATCAGGCAGTCTTTGAAGA...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGACCTTGCTGAACATTTaGAGGCAATGGACTATCCTT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRTLLNI*RQWTIL
Trigger: AAGGATAGTCCATTGCCTTCAAATGTTCAGCAAGGT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTACCTTGCTGAACATTTaGAGGCAATGGACTATCCTT +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGTLLNI*RQWTIL
Trigger: AAGGATAGTCCATTGCCTTCAAATGTTCAGCAAGGT...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCAGTTCATCCAATTCTTaGAGGCTCAATTTCACATCT +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVSSSNS*RLNFTS
Trigger: AGATGTGAAATTGAGCCTTCAAGAATTGGATGAACT...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCAGTGATACAACGCTCTaGACTGCTGGCAGTCAATCT +
Preference number: 4 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLSDTTL*TAGSQS
Trigger: AGATTGACTGCCAGCAGTTCAGAGCGTTGTATCACT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCAAGTTCATCTCCTTTTaGAGCATCCTTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVKFISF*SILRFH
Trigger: GTGAAATCTAAGGATGCTTCAAAAGGAGATGAACTT...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGGCTGTGTTTTGCTaGTTCTGCTTCCTTCTCATT +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDRAVFC*FCFLLI
Trigger: AATGAGAAGGAAGCAGAATCAGCAAAACACAGCCCT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAATGCAAATGACCACTaGGGTTCCTCCCTAAAGGAA +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDNANDH*GSSLKE
Trigger: TTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAAAAGGCATTAAATTaGTCACTGTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSKKALN*SLWALF
Trigger: AAATAGAGCCCACAGTGAGCAATTTAATGCCTTTTT...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTTTGGGATTCCTGTATaGATAAGCTGTGAGTACCCT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRFGIPV*ISCEYP
Trigger: AGGGTACTCACAGCTTATGCATACAGGAATCCCAAA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTGCTTCCTTCTCATTTaGAGGCTTGGAAACATGCAG +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDCFLLI*RLGNMQ
Trigger: CTGCATGTTTCCAAGCCTGCAAATGAGAAGGAAGCA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTTCATTCAACAGCGATaGAAGAATCTGTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVFIQQR*KNLFKC
Trigger: GCATTTGAACAGATTCTTGCATCGCTGTTGAATGAA...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCTACCACAAACAGCAGTaGCCAGAATTTCTAGTGATG +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGYHKQQ*PEFLVM
Trigger: CATCACTAGAAATTCTGGGCACTGCTGTTTGTGGTA...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp TGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGATCCCATTTTGTAGGTTaGCTGTTCACTCTGATGGTT +
Preference number: 4 (lower is better)
Translates to: WFSLGRVYVSRNLSISSRSHFVG*LFTLMV
Trigger: AACCATCAGAGTGAACAGGCAACCTACAAAATGGGA...TCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACAAACCTCACCAATGCTaGTTCATTCAACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNKPHQC*FIQQRC
Trigger: GCATCGCTGTTGAATGAACCAGCATTGGTGAGGTTT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACGGCTCCACATGCAATTaGCAAGTAAACTTGAGAATC +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNGSTCN*QVNLRI
Trigger: GATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCC...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATAGTCTTTTCAAGTTTTaGGACTTCATCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYSLFKF*DFIPGD
Trigger: ATCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACT...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp TGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGAATGCACATTTTCCCATaGGTATTGAAGTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: WFSLGRVYVSRNLSISSRMHIFP*VLKWLN
Trigger: ATTCAGCCACTTCAATACTCATGGGAAAATGTGCAT...TCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCCCTCTCGTAGTGGAATaGTTACACTACACTGATTGC +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCPLVVE*LHYTDC
Trigger: GCAATCAGTGTAGTGTAATCATTCCACTACGAGAGG...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCTTACTGCATTCCCTCTaGCTTGTCAAAGATTGCACC +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCLLHSL*LVKDCT
Trigger: GGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAA...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACGTCATTAACAGCACCTaGAAAAAGCATCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNVINST*KKHPEF
Trigger: GAACTCTGGATGCTTTTTTCAGGTGCTGTTAATGAC...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCACATTTGAACCTTGCTaGACATTTGAAGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGTFEPC*TFEGNG
Trigger: TCCATTGCCTTCAAATGTTCAGCAAGGTTCAAATGT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCTCTTTATTTGCAGAATaGGCCCAGGGACTCAACAAG +
Preference number: 4 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLSLFAE*AQGLNK
Trigger: CTTGTTGAGTCCCTGGGCTCATTCTGCAAATAAAGA...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAACAACTTCTTCCATCCTaGGTAAAAGGCTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQQLLPS*VKGWLQ
Trigger: TTGTAACCAGCCTTTTACTCAGGATGGAAGAAGTTG...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCTCAACAACAAAGGAATaGTGCATTGTGCTTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGSTTKE*CIVLLD
Trigger: ATCCAGAAGCACAATGCATCATTCCTTTGTTGTTGA...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTGATTCTTCCTACCCATaGGCATGGAATTTTCTTCTA +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFDSSYP*AWNFLL
Trigger: TAGAAGAAAATTCCATGCTCATGGGTAGGAAGAATC...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTTCTAATGGCATAGTTTaGCAGCTGTTCCATAAGAAG +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFSNGIV*QLFHKK
Trigger: CTTCTTATGGAACAGCTGGCAAACTATGCCATTAGA...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATTGTTCACAGTTTTACTaGATTCCCTCTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYCSQFY*IPSDLS
Trigger: TGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACA...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATATTGCCAATCCCAGTTaGAAAATGGCCTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYIANPS*KMAFIP
Trigger: TGGAATAAAGGCCATTTTGCAACTGGGATTGGCAAT...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTTACTAAAAGTGATATaGTTGTGCCCTCTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRLLKVI*LCPLVV
Trigger: TACCACCAGAGGGCACAAGCATATCACTTTTAGTAA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp GTTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAGGCATCCCTGTCTTGTaGCAGTTTTCAAAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: VKLLIIATISAPVIGLFRGIPVL*QFSKGN
Trigger: ATTCCCTTTTGAAAACTGGCACAAGACAGGGATGCC...TCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp TGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGATTAAATTGCTCACTGTaGGCTCTATTTTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: WFSLGRVYVSRNLSISSRLNCSL*ALFSRP
Trigger: AGGTCTGGAAAATAGAGCCCACAGTGAGCAATTTAA...TCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCATGATGCTTCAATACTaGGCAACCCAAACACCAATA +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGMMLQY*ATQTPI
Trigger: TATTGGTGTTTGGGTTGCCCAGTATTGAAGCATCAT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACCCAAATATGGCAGACTaGGGTCATGATGCTTCAATA +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNPNMAD*GHDASI
Trigger: TATTGAAGCATCATGACCCCAGTCTGCCATATTTGG...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTAAACCTCACCAATGCTaGTTCATTCAACAGCGATGC +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILKPHQC*FIQQRC
Trigger: GCATCGCTGTTGAATGAACCAGCATTGGTGAGGTTT...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR CAA 72 bp TGTACATTGATTTTGTATCCTGAGACTTTGCTGAAGTaGCTTATCAGCTTAAGGAGATTTTGGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: CTLILYPETLLK*LISLRRFWAET
Trigger: AGTCTCAGCCCAAAATCTCCTTAAGCTGATAAGCAACTTCAGCAAAGTCTCAGGATACAAAATCAATGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATATGCACATTTTCCCATaGGTATTGAAGTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDMHIFP*VLKWLN
Trigger: ATTCAGCCACTTCAATACTCATGGGAAAATGTGCAT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTGCAGATATAATTTTCTaGGATGCACATTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFADIIF*DAHFPM
Trigger: CATGGGAAAATGTGCATCTCAGAAAATTATATCTGC...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAATTTCACATCTTGTaGTACAACACGCAACACATT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRQFHIL*YNTQHI
Trigger: AATGTGTTGCGTGTTGTATCACAAGATGTGAAATTG...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGAGTTCATCCAATTCTTaGAGGCTCAATTTCACATCT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRSSSNS*RLNFTS
Trigger: AGATGTGAAATTGAGCCTTCAAGAATTGGATGAACT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGTTCTAGACCTTAACTaGGAAATTCTTGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYVLDLN*EILAFS
Trigger: GGAAAATGCAAGAATTTCTCAGTTAAGGTCTAGAAC...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCGTAGGGTTTATCGATTaGCATGACATATCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCVGFID*HDISAS
Trigger: TGAGGCTGATATGTCATGTCAATCGATAAACCCTAC...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAAGAAGCTCCAATGAATaGTTTCTCCCCCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQRSSNE*FLPLFS
Trigger: AGAAAATAGGGGGAGAAATCATTCATTGGAGCTTCT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTCCTCTTTTATTTCCTTaGGTAGTGGTTTGTAGTTCT +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFPLLFP*VVVCSS
Trigger: AGAACTACAAACCACTACTCAAGGAAATAAAAGAGG...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAATCTAATGGCATAGTTTaGCAGCTGTTCCATAAGAAG +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQSNGIV*QLFHKK
Trigger: CTTCTTATGGAACAGCTGGCAAACTATGCCATTAGA...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCTCTGAGCCTGAGTTTTaGTACCAGTTGTTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCSEPEF*YQLFKV
Trigger: GACTTTGAACAACTGGTAGCAAAACTCAGGCTCAGA...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACATTGCCAATCCCAGTTaGAAAATGGCCTTTATTCCA +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNIANPS*KMAFIP
Trigger: TGGAATAAAGGCCATTTTGCAACTGGGATTGGCAAT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATTTCATTCAACAGCGATaGAAGAATCTGTTCAAATGC +
Preference number: 4 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYFIQQR*KNLFKC
Trigger: GCATTTGAACAGATTCTTGCATCGCTGTTGAATGAA...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCTTATTTCTTCTCTGTTaGCTCCACATGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGLFLLC*LHMQLT
Trigger: TGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAA...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTTAAATTGCTCACTGTaGGCTCTATTTTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDLNCSL*ALFSRP
Trigger: AGGTCTGGAAAATAGAGCCCACAGTGAGCAATTTAA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACATGATGCTTCAATACTaGGCAACCCAAACACCAATA +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNMMLQY*ATQTPI
Trigger: TATTGGTGTTTGGGTTGCCCAGTATTGAAGCATCAT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTTGCATTTTCCAGCTTaGCTTTTACATCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRLHFPA*LLHLWV
Trigger: AACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGGATGCATTGTGCTTCTaGATATATATTTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRDALCF*IYILAF
Trigger: GAAGGCCAAAATATATATCCAGAAGCACAATGCATC...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp TGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGAAGTTCACTCATGATTTaGCTCTCTGTTTGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: WFSLGRVYVSRNLSISSRSSLMI*LSVCLL
Trigger: TAACAGACAAACAGAGAGCCAAATCATGAGTGAACT...TCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
3UTR CAA 72 bp AACAAAGCCCATTATCAACAACAAAGGAATGATGCATaGTGCTTCTGGATATATATTTTGGCCTTCAGACAC +
Preference number: 4 (lower is better)
Translates to: NKAHYQQQRNDA*CFWIYILAFRH
Trigger: GTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTAGTCTTTTCAAGTTTTaGGACTTCATCCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILSLFKF*DFIPGD
Trigger: ATCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACT...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCATGCACATTTTCCCATaGGTATTGAAGTGGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCMHIFP*VLKWLN
Trigger: ATTCAGCCACTTCAATACTCATGGGAAAATGTGCAT...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATGCAGATATAATTTTCTaGGATGCACATTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDADIIF*DAHFPM
Trigger: CATGGGAAAATGTGCATCTCAGAAAATTATATCTGC...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAACAATTTCACATCTTGTaGTACAACACGCAACACATT +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQQFHIL*YNTQHI
Trigger: AATGTGTTGCGTGTTGTATCACAAGATGTGAAATTG...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAGTTCTAGACCTTAACTaGGAAATTCTTGCATTTTCC +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQVLDLN*EILAFS
Trigger: GGAAAATGCAAGAATTTCTCAGTTAAGGTCTAGAAC...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR TCA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCGTTTATCGATTGACATaGCATATCAGCCTCACTAAC +
Preference number: 4 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLVYRLT*HISLTN
Trigger: GTTAGTGAGGCTGATATGTCATGTCAATCGATAAAC...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCAGAAAGAAGCTCCAATaGATGATTTCTCCCCCTATT +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCRKKLQ*MISPPI
Trigger: AATAGGGGGAGAAATCATTCATTGGAGCTTCTTTCT...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR TCA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTGTATTCTATTCTCTTTaGAGCAATTGTGAATGGGAG +
Preference number: 4 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIVFYSL*SNCEWE
Trigger: CTCCCATTCACAATTGCTTCAAAGAGAATAGAATAC...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR GCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTTGTTCACAGTTTTACTaGATTCCCTCTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILCSQFY*IPSDLS
Trigger: TGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACA...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACTATCAATTTTCCCTTTaGCTTTTTCAGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: NDALCFWIYILAFRHIGNYQFSL*LFQGCV
Trigger: AACACAGCCCTGAAAAAGGCAAAGGGAAAATTGATA...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAAATTGCTATGTCTTTaGAACAGTAAGAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIKLLCL*NSKRSP
Trigger: AGGACTCCTCTTACTGTTGCAAAGACATAGCAATTT...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTTATTTCTTCTCTGTTaGCTCCACATGCAATTGACA +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDLFLLC*LHMQLT
Trigger: TGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp GTTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAACCAATCCCAATGCTTaGTTATTTCTTCTCTGTTGG +
Preference number: 4 (lower is better)
Translates to: VKLLIIATISAPVIGLFRTNPNA*LFLLCW
Trigger: CCAACAGAGAAGAAATAACCAAGCATTGGGATTGGT...TCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAACTCAAAATTATCAGATaGCTCTGTAGACTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQLKIIR*LCRLRT
Trigger: AGTTCTGAGTCTACAGAGCCATCTGATAATTTTGAG...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGAAAATATTCATTGCCTaGCAGTATCCAATTTTGGGA +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRKIFIA*QYPILG
Trigger: TCCCAAAATTGGATACTGCCAGGCAATGAATATTTT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATATCCCAGTTGCAAAATaGCCTTTATTCCATCATAGA +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDIPVAK*PLFHHR
Trigger: TCTATGATGGAATAAAGGCCATTTTGCAACTGGGAT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAATCCCAGTTGCAAAATaGCCTTTATTCCATCATAGA +
Preference number: 4 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQIPVAK*PLFHHR
Trigger: TCTATGATGGAATAAAGGCCATTTTGCAACTGGGAT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATGATGCATTGTGCTTCTaGATATATATTTTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDDALCF*IYILAF
Trigger: GAAGGCCAAAATATATATCCAGAAGCACAATGCATC...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGGCAATTCTGTTACCTTaGCAATCATTACATACAAGT +
Preference number: 4 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRAILLP*QSLHTS
Trigger: ACTTGTATGTAATGATTGCCAAGGTAACAGAATTGC...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTAATAGCACAGGACAGTaGACAAGTATGGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILNSTGQ*TSMVCF
Trigger: AAAGCAAACCATACTTGTCCACTGTCCTGTGCTATT...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTGCTAAAACCAATTTATaGGATTTTCAAAGGCTCAAC +
Preference number: 4 (lower is better)
Translates to: RNDALCFWIYILAFRHIGAKTNL*DFQRLN
Trigger: GTTGAGCCTTTGAAAATCCCATAAATTGGTTTTAGC...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CCA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTACATCCCTTGTAAGTTaGATTCCTAGGTATTCTATT +
Preference number: 4 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFTSLVS*IPRYSI
Trigger: AATAGAATACCTAGGAATCCAACTTACAAGGGATGT...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR TCA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTAAGTTCATCTCCTTTTaGAGCATCCTTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: RQMSAILLPWQSLHTSILKFISF*SILRFH
Trigger: GTGAAATCTAAGGATGCTTCAAAAGGAGATGAACTT...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR GCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAAAAAGGCATTAAATTaGTCACTGTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDKKALN*SLWALF
Trigger: AAATAGAGCCCACAGTGAGCAATTTAATGCCTTTTT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR GCA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTAAAAAGGCATTAAATTaGTCACTGTGGGCTCTATTT +
Preference number: 4 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIKKALN*SLWALF
Trigger: AAATAGAGCCCACAGTGAGCAATTTAATGCCTTTTT...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CCA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAAAATATTCATTGCCTaGCAGTATCCAATTTTGGGA +
Preference number: 4 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDKIFIA*QYPILG
Trigger: TCCCAAAATTGGATACTGCCAGGCAATGAATATTTT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CCA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCTTGCATTTTCCAGCTTaGCTTTTACATCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: LKSANKAHYQQQRNDALCLHFPA*LLHLWV
Trigger: AACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAA...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357242.10
3UTR CAA 72 bp AGTTCACTCATGATTTGGCTCTCTGTTTGTCTGTTATaGGTGTATAAGAATGCTTGTGATTTTTGTACATTG +
Preference number: 4 (lower is better)
Translates to: SSLMIWLSVCLL*VYKNACDFCTL
Trigger: CAATGTACAAAAATCACAAGCATTCTTATACACCAATAACAGACAAACAGAGAGCCAAATCATGAGTGAACT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp TCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCATCCCTGTCTTGTGCCAGTAGTGATTCTCTCCTaGGGAACACACGTGAATACT +
Preference number: 5 (lower is better)
Translates to: SNTMLNRSGERGHPCLVPVVILS*GTHVNT
Trigger: AGTATTCACGTGTGTTCCCAAGGAGAGAATCACTAC...TGGCACAAGACAGGGATGCCCTCTCTCACCACTCCTATTCAACATAGTGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS TCA 90 bp TCATTCAACAGCGATGCAAGAATCTGTTCAAATGCAAATGACCACTaGGGTTCCTCCCTAAAGGAACAAGGATCTTTCTCCAAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SFNSDARICSNANDH*GSSLKEQGSFSKWL
Trigger: GAGCCACTTGGAGAAAGATCCTTGTTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAGATTCTTGCATCGCTGTTGAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGTGGCTCCACATGCAATaGACAAGTAAACTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: SFSCLIALARTSNTMLNRWLHMQ*TSKLEN
Trigger: ATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCCA...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp TCCTTCTCCTGCCTAATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGTTTTCCAGACCTCTTTaGGTGATCTGTAGAGGATTA +
Preference number: 5 (lower is better)
Translates to: SFSCLIALARTSNTMLNRFSRPL*VICRGL
Trigger: TAATCCTCTACAGATCACCAAAAGAGGTCTGGAAAA...CCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAATTAGGCAGGAGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGTCTTCAGTAGCCAAGTaGCAGGTCCCTAAGGACTGC +
Preference number: 5 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRSSVAK*QVPKDC
Trigger: GCAGTCCTTAGGGACCTGCAACTTGGCTACTGAAGA...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCGTACCAGAGAATCCTTaGGCTGATGATGTAGGGCTA +
Preference number: 5 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVVPENP*ADDVGL
Trigger: TAGCCCTACATCATCAGCCAAAGGATTCTCTGGTAC...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp ATTGCCCTGGCCAGAACTTCCAACACTATGTTGAATAGGAGTGGTGAGAGAGGGCAGACAGGTTTAAAATaGCTATGTCTTTGCAACAGT +
Preference number: 5 (lower is better)
Translates to: IALARTSNTMLNRSGERGQTGLK*LCLCNS
Trigger: ACTGTTGCAAAGACATAGCAATTTTAAACCTGTCTG...CCCTCTCTCACCACTCCTATTCAACATAGTGTTGGAAGTTCTGGCCAGGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS TCA 90 bp TGCTGGTTCATTCAACAGCGATGCAAGAATCTGTTCAAATGCAAATaGCCACTGAGGTTCCTCCCTAAAGGAACAAGGATCTTTCTCCAA +
Preference number: 5 (lower is better)
Translates to: CWFIQQRCKNLFKCK*PLRFLPKGTRIFLQ
Trigger: TTGGAGAAAGATCCTTGTTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAGATTCTTGCATCGCTGTTGAATGAACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATACACTGATTGCCATCTaGGCTAGCAAAGCAGATATA +
Preference number: 5 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYTLIAI*ASKADI
Trigger: TATATCTGCTTTGCTAGCCAAGATGGCAATCAGTGT...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTGCAACACATTCTGTTTaGTTGTTTCCTCTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSATHSV*LFPLGS
Trigger: AGACCCTAGAGGAAACAACAAAACAGAATGTGTTGC...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCCTAAAAGTGATATGCTaGTGCCCTCTGGTGGTAACA +
Preference number: 5 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVLKVIC*CPLVVT
Trigger: TGTTACCACCAGAGGGCACAAGCATATCACTTTTAG...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATAAGTCTTTTCAAGTTTaGAGACTTCATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYKSFQV*RLHPRR
Trigger: TCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACTT...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTTTTTCCAGACCTCTTTaGGTGATCTGTAGAGGATTA +
Preference number: 5 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSFSRPL*VICRGL
Trigger: TAATCCTCTACAGATCACCAAAAGAGGTCTGGAAAA...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCACACTGATTGCCATCTaGGCTAGCAAAGCAGATATA +
Preference number: 5 (lower is better)
Translates to: SPTHRNQTDSYRNVSKLVTLIAI*ASKADI
Trigger: TATATCTGCTTTGCTAGCCAAGATGGCAATCAGTGT...GACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTTCTTCAGTAGCCAAGTaGCAGGTCCCTAAGGACTGC +
Preference number: 5 (lower is better)
Translates to: RQMSAILLPWQSLHTSILSSVAK*QVPKDC
Trigger: GCAGTCCTTAGGGACCTGCAACTTGGCTACTGAAGA...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp CACAAACAGCAGTGCCCAGAATTTCTAGTGATGTCTCGGTCTAATGAAAGACCTACACATTCTGTTTTGTaGTTTCCTCTAGGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: HKQQCPEFLVMSRSNERPTHSVL*FPLGSV
Trigger: TACAGACCCTAGAGGAAACAACAAAACAGAATGTGT...AGGTCTTTCATTAGACCGAGACATCACTAGAAATTCTGGGCACTGCTGTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCCTAGTGAGTCTTTATTaGCAGAATGAGCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGLVSLY*QNEPRD
Trigger: GTCCCTGGGCTCATTCTGCAAATAAAGACTCACTAG...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCTAGTGAGTCTTTATTaGCAGAATGAGCCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRLVSLY*QNEPRD
Trigger: GTCCCTGGGCTCATTCTGCAAATAAAGACTCACTAG...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGGTACCAGAGAATCCTTaGGCTGATGATGTAGGGCTA +
Preference number: 5 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRVPENP*ADDVGL
Trigger: TAGCCCTACATCATCAGCCAAAGGATTCTCTGGTAC...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp TTGATCATGGTGGATAAGCTTTTTGATGTGCTGCTGGATTCGGCTTGCCAGTATATTGATTTGTGTATATaGAACCAGCCTTGCATCCCA +
Preference number: 5 (lower is better)
Translates to: LIMVDKLFDVLLDSACQYIDLCI*NQPCIP
Trigger: TGGGATGCAAGGCTGGTTCAATATACACAAATCAAT...ATACTGGCAAGCCGAATCCAGCAGCACATCAAAAAGCTTATCCACCATGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp GTTAAGCTATTGATTATTGCCACAATTTCAGCTCCTGTTATTGGTCTATTCAGAGAGGGCATCCCTGTCTaGTGCCAGTTTTCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: VKLLIIATISAPVIGLFREGIPV*CQFSKG
Trigger: CCCTTTTGAAAACTGGCACAAGACAGGGATGCCCTC...TCTGAATAGACCAATAACAGGAGCTGAAATTGTGGCAATAATCAATAGCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS TCA 90 bp AGTGATTCTCTCCTTGGGAACACACGTGAATACTCTCTGTCAGTATaGCATTTGAAGTCTTTTCAAGTTTTGAGACTTCATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: SDSLLGNTREYSLSV*HLKSFQVLRLHPRR
Trigger: TCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACTTCAAATGTCATACTGACAGAGAGTATTCACGTGTGTTCCCAAGGAGAGAATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
ENST00000481617.6
CDS CCA 90 bp GCATTCCCTCTGACTTGTCAAAGATTGCACCTCAAAATTATCAGATaGCTCTGTAGACTCAGAACTAATAGCAAGCTCTGTGCTAATATC +
Preference number: 5 (lower is better)
Translates to: AFPLTCQRLHLKIIR*LCRLRTNSKLCANI
Trigger: GATATTAGCACAGAGCTTGCTATTAGTTCTGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310452.6
ENST00000357242.10
CDS-3UTR CAA 90 bp GGAGGTCTGCCCTTTCATGGTTTCACATCTAGAAAAGTCAAAAGGCTTATAACCAAGTCTTTTCAAGTTTaGAGACTTCATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GGLPFHGFTSRKVKRLITKSFQV*RLHPRR
Trigger: TCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACTT...GGTTATAAGCCTTTTGACTTTTCTAGATGTGAAACCATGAAAGGGCAGACCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGTAGTGATTCTCTCCTaGGGAACACACGTGAATACT +
Preference number: 5 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYVVILS*GTHVNT
Trigger: AGTATTCACGTGTGTTCCCAAGGAGAGAATCACTAC...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAGATCTCGAGTCTTTTaGGTTCGAAACATACTAACA +
Preference number: 5 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSRSRVF*VRNILT
Trigger: TGTTAGTATGTTTCGAACCAAAAAGACTCGAGATCT...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTTTTCAGGGCTGTGTTTaGCTGATTCTGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: RNDALCFWIYILAFRHIGFQGCV*LILLPS
Trigger: AGAAGGAAGCAGAATCAGCAAAACACAGCCCTGAAA...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCAGAAAGGGAGACCTCTaGAGTCACTCTGAAGGAGGT +
Preference number: 5 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLRKGDL*SHSEGG
Trigger: ACCTCCTTCAGAGTGACTCAAGAGGTCTCCCTTTCT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp AAATCCCTGAGCCCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTACTATAATGTTTAGTTaGTTTCTCCTGCAGACTCAG +
Preference number: 5 (lower is better)
Translates to: KSLSPTHRNQTDSYRNVSTIMFS*FLLQTQ
Trigger: CTGAGTCTGCAGGAGAAACAAACTAAACATTATAGT...ACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGGGCTCAGGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTGTGATGCCTCCAGCTTaGTTCTTTTGGCTCAGGATT +
Preference number: 5 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIVMPPA*FFWLRI
Trigger: AATCCTGAGCCAAAAGAACAAAGCTGGAGGCATCAC...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS TCA 90 bp ACTGTCATTAAGGCTTCAGTGTTCACAGTTTTACTGCATTCCCTCTaGCTTGTCAAAGATTGCACCTCAAAATTATCAGATGGCTCTGTA +
Preference number: 5 (lower is better)
Translates to: TVIKASVFTVLLHSL*LVKDCTSKLSDGSV
Trigger: TACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAAGCCTTAATGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS GCA 90 bp GAGGGTGAAATACTGTCATTAAGGCTTCAGTGTTCACAGTTTTACTaGATTCCCTCTGACTTGTCAAAGATTGCACCTCAAAATTATCAG +
Preference number: 5 (lower is better)
Translates to: EGEILSLRLQCSQFY*IPSDLSKIAPQNYQ
Trigger: CTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAAGCCTTAATGACAGTATTTCACCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS-3UTR CAA 90 bp GGAGGTCTGCCCTTTCATGGTTTCACATCTAGAAAAGTCAAAAGGCTTATAACCGGTCTTCATAATATTTaGTTCCAACCAATCCCAATG +
Preference number: 5 (lower is better)
Translates to: GGLPFHGFTSRKVKRLITGLHNI*FQPIPM
Trigger: CATTGGGATTGGTTGGAACAAAATATTATGAAGACC...GGTTATAAGCCTTTTGACTTTTCTAGATGTGAAACCATGAAAGGGCAGACCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATGTAGTGATTCTCTCCTaGGGAACACACGTGAATACT +
Preference number: 5 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDVVILS*GTHVNT
Trigger: AGTATTCACGTGTGTTCCCAAGGAGAGAATCACTAC...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGGCAACACATTCTGTTTaGTTGTTTCCTCTAGGGTCT +
Preference number: 5 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRATHSV*LFPLGS
Trigger: AGACCCTAGAGGAAACAACAAAACAGAATGTGTTGC...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTTTCAGGGCTGTGTTTaGCTGATTCTGCTTCCTTCT +
Preference number: 5 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDFQGCV*LILLPS
Trigger: AGAAGGAAGCAGAATCAGCAAAACACAGCCCTGAAA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS TCA 90 bp GATAGGCAATTCCTAGGGATTTACATCTTGGTTCTAGACCTTAACTaGGAAATTCTTGCATTTTCCAGCTTGGCTTTTACATCTATGGGT +
Preference number: 5 (lower is better)
Translates to: DRQFLGIYILVLDLN*EILAFSSLAFTSMG
Trigger: ACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAAGAATTTCTCAGTTAAGGTCTAGAACCAAGATGTAAATCCCTAGGAATTGCCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAGTTATTTCTTCTCTGTaGGCTCCACATGCAATTGAC +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQVISSL*APHAID
Trigger: GTCAATTGCATGTGGAGCCAACAGAGAAGAAATAAC...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACGTTATTTCTTCTCTGTaGGCTCCACATGCAATTGAC +
Preference number: 5 (lower is better)
Translates to: NDALCFWIYILAFRHIGNVISSL*APHAID
Trigger: GTCAATTGCATGTGGAGCCAACAGAGAAGAAATAAC...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp CCTACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATAACCAATCCCAATGCTaGGTTATTTCTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: PTHRNQTDSYRNVSKLVYNQSQC*VISSLL
Trigger: CAACAGAGAAGAAATAACCAAGCATTGGGATTGGTT...ATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp TGGTTTAGTCTTGGGAGAGTGTATGTGTCGAGGAATTTATCCATTTCTTCTAGAAACCAATCCCAATGCTaGGTTATTTCTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: WFSLGRVYVSRNLSISSRNQSQC*VISSLL
Trigger: CAACAGAGAAGAAATAACCAAGCATTGGGATTGGTT...TCTAGAAGAAATGGATAAATTCCTCGACACATACACTCTCCCAAGACTAAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAACACTGATTGCCATCTaGGCTAGCAAAGCAGATATA +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQTLIAI*ASKADI
Trigger: TATATCTGCTTTGCTAGCCAAGATGGCAATCAGTGT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAACTTGCATTTTCCAGCTaGGCTTTTACATCTATGGGT +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQLAFSS*AFTSMG
Trigger: ACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAAG...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACCTTGCATTTTCCAGCTaGGCTTTTACATCTATGGGT +
Preference number: 5 (lower is better)
Translates to: NDALCFWIYILAFRHIGNLAFSS*AFTSMG
Trigger: ACCCATAGATGTAAAAGCCAAGCTGGAAAATGCAAG...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTGGCTCCACATGCAATaGACAAGTAAACTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDWLHMQ*TSKLEN
Trigger: ATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCCA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTGGTCTTCATAATATTTaGTTCCAACCAATCCCAATG +
Preference number: 5 (lower is better)
Translates to: RNDALCFWIYILAFRHIGGLHNI*FQPIPM
Trigger: CATTGGGATTGGTTGGAACAAAATATTATGAAGACC...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AAGAGGTCCTTCACATCCCTTGTAAGTTGGATTCCTAGGTATTCTATTCTCTTTGGTCTTCATAATATTTaGTTCCAACCAATCCCAATG +
Preference number: 5 (lower is better)
Translates to: KRSFTSLVSWIPRYSILFGLHNI*FQPIPM
Trigger: CATTGGGATTGGTTGGAACAAAATATTATGAAGACC...AAAGAGAATAGAATACCTAGGAATCCAACTTACAAGGGATGTGAAGGACCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAAGTCTTTTCAAGTTTaGAGACTTCATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDKSFQV*RLHPRR
Trigger: TCTCCTGGGATGAAGTCTCAAAACTTGAAAAGACTT...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACTTTTCCAGACCTCTTTaGGTGATCTGTAGAGGATTA +
Preference number: 5 (lower is better)
Translates to: NDALCFWIYILAFRHIGNFSRPL*VICRGL
Trigger: TAATCCTCTACAGATCACCAAAAGAGGTCTGGAAAA...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTGAGTTTTGCTACCAGTaGTTCAAAGTCTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: RNDALCFWIYILAFRHIGEFCYQ*FKVFNF
Trigger: GAAGTTAAAGACTTTGAACAACTGGTAGCAAAACTC...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTCTGACTTGTCAAAGATaGCACCTCAAAATTATCAGA +
Preference number: 5 (lower is better)
Translates to: RNDALCFWIYILAFRHIGLTCQR*HLKIIR
Trigger: TCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAG...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp CACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGAGATCTCGAGTCTTTTaGGTTCGAAACATACTAACA +
Preference number: 5 (lower is better)
Translates to: HRNQTDSYRNVSKLVYDRRSRVF*VRNILT
Trigger: TGTTAGTATGTTTCGAACCAAAAAGACTCGAGATCT...CCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAACACATTCTGTTTTGTaGTTTCCTCTAGGGTCTGTA +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQTHSVL*FPLGSV
Trigger: TACAGACCCTAGAGGAAACAACAAAACAGAATGTGT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTAACATATCAATTTTCCCTTaGCCTTTTTCAGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: NDALCFWIYILAFRHIGNISIFP*PFSGLC
Trigger: ACACAGCCCTGAAAAAGGCAAAGGGAAAATTGATAT...GTTACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAATATCAATTTTCCCTTaGCCTTTTTCAGGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQISIFP*PFSGLC
Trigger: ACACAGCCCTGAAAAAGGCAAAGGGAAAATTGATAT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATGATGCATTGTGCTTCTGGATATATATTTTGGCCTTCAGACACATTGGTTTTCAGTTAGATAACTaGAAAACAAGGGCCCCAAAT +
Preference number: 5 (lower is better)
Translates to: RNDALCFWIYILAFRHIGFQLDN*KTRAPN
Trigger: ATTTGGGGCCCTTGTTTTCAAGTTATCTAACTGAAA...ACCAATGTGTCTGAAGGCCAAAATATATATCCAGAAGCACAATGCATCATTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp ACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAGCAATTCTGTTACCTaGGCAATCATTACATACAAG +
Preference number: 5 (lower is better)
Translates to: TGIKLTATGMLVNLSMIGSNSVT*AIITYK
Trigger: CTTGTATGTAATGATTGCCAAGGTAACAGAATTGCT...GCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS GCA 90 bp AATACAGATAAGGTCTTCATAATATTTTGTTCCAACCAATCCCAATaGTTGGTTATTTCTTCTCTGTTGGCTCCACATGCAATTGACAAG +
Preference number: 5 (lower is better)
Translates to: NTDKVFIIFCSNQSQ*LVISSLLAPHAIDK
Trigger: CTTGTCAATTGCATGTGGAGCCAACAGAGAAGAAATAACCAAGCATTGGGATTGGTTGGAACAAAATATTATGAAGACCTTATCTGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
ENST00000460545.1
ENST00000481617.6
CDS-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCTGGCTCCACATGCAATaGACAAGTAAACTTGAGAAT +
Preference number: 5 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLWLHMQ*TSKLEN
Trigger: ATTCTCAAGTTTACTTGTCAATTGCATGTGGAGCCA...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCAACCAATCCCAATGCTaGGTTATTTCTTCTCTGTTG +
Preference number: 5 (lower is better)
Translates to: LKSANKAHYQQQRNDALCNQSQC*VISSLL
Trigger: CAACAGAGAAGAAATAACCAAGCATTGGGATTGGTT...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp CTGTTCACTCTGATGGTTGTTTCTTTTGCTGTGCAGAAGCTCTTTAGTTTAATTGAGTTTTGCTACCAGTaGTTCAAAGTCTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: LFTLMVVSFAVQKLFSLIEFCYQ*FKVFNF
Trigger: GAAGTTAAAGACTTTGAACAACTGGTAGCAAAACTC...AATTAAACTAAAGAGCTTCTGCACAGCAAAAGAAACAACCATCAGAGTGAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481617.6
CDS-3UTR CAA 90 bp ACTCACAGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATTTTCATCACTCACATTaGAACCTTGCTGAACATTTG +
Preference number: 5 (lower is better)
Translates to: THRNQTDSYRNVSKLVYDFHHSH*NLAEHL
Trigger: CAAATGTTCAGCAAGGTTCAAATGTGAGTGATGAAA...ATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCTGTGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp AGGAATCAAACTGACAGCTACAGGAATGTTAGTAAACTTGTCTATGATAGGCAAAAGTTCATCCAATTCTaGAAGGCTCAATTTCACATC +
Preference number: 5 (lower is better)
Translates to: RNQTDSYRNVSKLVYDRQKFIQF*KAQFHI
Trigger: GATGTGAAATTGAGCCTTCAAGAATTGGATGAACTT...TTGCCTATCATAGACAAGTTTACTAACATTCCTGTAGCTGTCAGTTTGATTCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCGAGTTTTGCTACCAGTaGTTCAAAGTCTTTAACTTC +
Preference number: 5 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLEFCYQ*FKVFNF
Trigger: GAAGTTAAAGACTTTGAACAACTGGTAGCAAAACTC...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp AGACAGATGTCAGCAATTCTGTTACCTTGGCAATCATTACATACAAGTATACTTTTTCATCACTCACATTaGAACCTTGCTGAACATTTG +
Preference number: 5 (lower is better)
Translates to: RQMSAILLPWQSLHTSILFHHSH*NLAEHL
Trigger: CAAATGTTCAGCAAGGTTCAAATGTGAGTGATGAAA...AAGTATACTTGTATGTAATGATTGCCAAGGTAACAGAATTGCTGACATCTGTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCAAGTTCATCCAATTCTaGAAGGCTCAATTTCACATC +
Preference number: 5 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLKFIQF*KAQFHI
Trigger: GATGTGAAATTGAGCCTTCAAGAATTGGATGAACTT...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp TTAAAAAGTGCTAACAAAGCCCATTATCAACAACAAAGGAATGATGCATTGTGCATTAATAAATTGTCCTaGGTAGGAATAGCACAGGAC +
Preference number: 5 (lower is better)
Translates to: LKSANKAHYQQQRNDALCINKLS*VGIAQD
Trigger: GTCCTGTGCTATTCCTACCAAGGACAATTTATTAAT...GCACAATGCATCATTCCTTTGTTGTTGATAATGGGCTTTGTTAGCACTTTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS-3UTR CAA 90 bp GACACTACTAGTAAGTGTTTAGCTAAAACCAATTTATGGGATTTTCAAAGGCTCGTGTACAATAGTGCCTaGTATACATGTGTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: DTTSKCLAKTNLWDFQRLVYNSA*YTCVFL
Trigger: TAGAAAGACACATGTATACAAGGCACTATTGTACAC...GAGCCTTTGAAAATCCCATAAATTGGTTTTAGCTAAACACTTACTAGTAGTGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357242.10
CDS TCA 72 bp GCGAAATGGAGCTACTTTAGCAGTAGAGTCCAAGACTaGATCAAGAGTCCCAACCAGAAGCCCTGTGAGCCC +
Preference number: 6 (lower is better)
Translates to: AKWSYFSSRVQD*IKSPNQKPCEP
Trigger: GGGCTCACAGGGCTTCTGGTTGGGACTCTTGATTCAGTCTTGGACTCTACTGCTAAAGTAGCTCCATTTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
ENST00000481617.6
CDS CAA 90 bp TCCTCACTGGGTCCTCCAGAACCACAGACAGTACCAGAGAATCCTTaGGCTGATGATGTAGGGCTATGTAGTTTCCTTCCAACTTCTTCC +
Preference number: 6 (lower is better)
Translates to: SSLGPPEPQTVPENP*ADDVGLCSFLPTSS
Trigger: GGAAGAAGTTGGAAGGAAACTACATAGCCCTACATCATCAGCCAAAGGATTCTCTGGTACTGTCTGTGGTTCTGGAGGACCCAGTGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS TCA 72 bp GCGAAATGGAGCTACTTTAGCAGTAGAGTCCAAGACTaGATCAAGAGTCCCAACCAGAAGCCCTGTTGTAAT +
Preference number: 6 (lower is better)
Translates to: AKWSYFSSRVQD*IKSPNQKPCCN
Trigger: ATTACAACAGGGCTTCTGGTTGGGACTCTTGATTCAGTCTTGGACTCTACTGCTAAAGTAGCTCCATTTCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460545.1
CDS GCA 72 bp CTGAGGAAGGTGATCCCTGATAAGTTCTTCAAAGACTaGCTGATCCACCAAGGCACCAATAATTCGACGATT +
Preference number: 6 (lower is better)
Translates to: LRKVIPDKFFKD*LIHQGTNNSTI
Trigger: AATCGTCGAATTATTGGTGCCTTGGTGGATCAGGCAGTCTTTGAAGAACTTATCAGGGATCACCTTCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS CAA 72 bp CGACGTAAATCACGTTCAATTTCTTCAGTAGCCAAGTaGCAGGTCCCTAAGGACTGCTCAACCACTTCAGTA +
Preference number: 6 (lower is better)
Translates to: RRKSRSISSVAK*QVPKDCSTTSV
Trigger: TACTGAAGTGGTTGAGCAGTCCTTAGGGACCTGCAACTTGGCTACTGAAGAAATTGAACGTGATTTACGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS TCA 72 bp AGCGATGCAAGAATCTGTTCAAATGCAAATGACCACTaGGGTTCCTCCCTAAAGGAACAAGGATCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: SDARICSNANDH*GSSLKEQGSFS
Trigger: GGAGAAAGATCCTTGTTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAGATTCTTGCATCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS TCA 72 bp AGTATCCAATTTTGGGATTCCTGTATGCATAAGCTGTaGGTACCCTTCTCAGAGCAGATATGCCAGTATCAC +
Preference number: 6 (lower is better)
Translates to: SIQFWDSCMHKL*VPFSEQICQYH
Trigger: GTGATACTGGCATATCTGCTCTGAGAAGGGTACTCACAGCTTATGCATACAGGAATCCCAAAATTGGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS TCA 72 bp ATTCAACAGCGATGCAAGAATCTGTTCAAATGCAAATaGCCACTGAGGTTCCTCCCTAAAGGAACAAGGATC +
Preference number: 6 (lower is better)
Translates to: IQQRCKNLFKCK*PLRFLPKGTRI
Trigger: GATCCTTGTTCCTTTAGGGAGGAACCTCAGTGGTCATTTGCATTTGAACAGATTCTTGCATCGCTGTTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS CAA 72 bp CACAGTTTTACTGCATTCCCTCTGACTTGTCAAAGATaGCACCTCAAAATTATCAGATGGCTCTGTAGACTC +
Preference number: 6 (lower is better)
Translates to: HSFTAFPLTCQR*HLKIIRWLCRL
Trigger: GAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS CAA 72 bp TCTGGAATCCCTCTTACAACAAGATCTCGAGTCTTTTaGGTTCGAAACATACTAACACCACGTCCACATTCT +
Preference number: 6 (lower is better)
Translates to: SGIPLTTRSRVF*VRNILTPRPHS
Trigger: AGAATGTGGACGTGGTGTTAGTATGTTTCGAACCAAAAAGACTCGAGATCTTGTTGTAAGAGGGATTCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS CAA 90 bp CTTAATGTTTCTGGAATCCCTCTTACAACAAGATCTCGAGTCTTTTaGGTTCGAAACATACTAACACCACGTCCACATTCTGCAAACAGT +
Preference number: 6 (lower is better)
Translates to: LNVSGIPLTTRSRVF*VRNILTPRPHSANS
Trigger: ACTGTTTGCAGAATGTGGACGTGGTGTTAGTATGTTTCGAACCAAAAAGACTCGAGATCTTGTTGTAAGAGGGATTCCAGAAACATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS CAA 90 bp TTCAGTGTTCACAGTTTTACTGCATTCCCTCTGACTTGTCAAAGATaGCACCTCAAAATTATCAGATGGCTCTGTAGACTCTGTGCTAAT +
Preference number: 6 (lower is better)
Translates to: FSVHSFTAFPLTCQR*HLKIIRWLCRLCAN
Trigger: ATTAGCACAGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276175.7
CDS GCA 72 bp ATACTGTCATTAAGGCTTCAGTGTTCACAGTTTTACTaGATTCCCTCTGACTTGTCAAAGATTGCACCTCAA +
Preference number: 6 (lower is better)
Translates to: ILSLRLQCSQFY*IPSDLSKIAPQ
Trigger: TTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAAGCCTTAATGACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS CCA 72 bp CTGACTTGTCAAAGATTGCACCTCAAAATTATCAGATaGCTCTGTAGACTCAGAACTAATAGCAAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: LTCQRLHLKIIR*LCRLRTNSKLC
Trigger: ACAGAGCTTGCTATTAGTTCTGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310452.6
ENST00000357242.10
CDS CAA 72 bp CTTCAGTGTTCACAGTTTTACTGCATTCCCTCTGACTaGTCAAAGATTGCACCTCAAAATTATCAGATGGCT +
Preference number: 6 (lower is better)
Translates to: LQCSQFYCIPSD*SKIAPQNYQMA
Trigger: AGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
CDS CAA 90 bp TTCAGTGTTCACAGTTTTACTGCATTCCCTCTGACTTGTCAAAGATaGCACCTCAAAATTATCAGATGGCTCTGTAGACTCAGAACTAAT +
Preference number: 6 (lower is better)
Translates to: FSVHSFTAFPLTCQR*HLKIIRWLCRLRTN
Trigger: ATTAGTTCTGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAGAGGGAATGCAGTAAAACTGTGAACACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310452.6
ENST00000357242.10
CDS GCA 72 bp AAGGTCTTCATAATATTTTGTTCCAACCAATCCCAATaGTTGGTTATTTCTTCTCTGTTGGCTCCACATGCA +
Preference number: 6 (lower is better)
Translates to: KVFIIFCSNQSQ*LVISSLLAPHA
Trigger: TGCATGTGGAGCCAACAGAGAAGAAATAACCAAGCATTGGGATTGGTTGGAACAAAATATTATGAAGACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276175.7
ENST00000310452.6
ENST00000357242.10
ENST00000460545.1
ENST00000481617.6
CDS CAA 72 bp CATCTTGTGATACAACACGCAACACATTCTGTTTTGTaGTTTCCTCTAGGGTCTGTATCACATACAACCTAT +
Preference number: 6 (lower is better)
Translates to: HLVIQHATHSVL*FPLGSVSHTTY
Trigger: ATAGGTTGTATGTGATACAGACCCTAGAGGAAACAACAAAACAGAATGTGTTGCGTGTTGTATCACAAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10
CDS CCA 72 bp CTGACTTGTCAAAGATTGCACCTCAAAATTATCAGATaGCTCTGTAGACTCTGTGCTAATATCATGATATTG +
Preference number: 6 (lower is better)
Translates to: LTCQRLHLKIIR*LCRLCANIMIL
Trigger: CAATATCATGATATTAGCACAGAGTCTACAGAGCCATCTGATAATTTTGAGGTGCAATCTTTGACAAGTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276175.7
CDS TCA 72 bp TTCATCCAATTCTTGAAGGCTCAATTTCACATCTTGTaGTACAACACGCAACACATTCTGTTTTGTTGTTTC +
Preference number: 6 (lower is better)
Translates to: FIQFLKAQFHIL*YNTQHILFCCF
Trigger: GAAACAACAAAACAGAATGTGTTGCGTGTTGTATCACAAGATGTGAAATTGAGCCTTCAAGAATTGGATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276175.7
ENST00000357242.10