RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D5 (Homo sapiens)

Ensembl gene IDs: ENSG00000131374

Ensembl transcript IDs: ENST00000253692.11, ENST00000412981.5, ENST00000414318.2, ENST00000414349.5, ENST00000415814.6, ENST00000423331.6, ENST00000425944.5, ENST00000428355.5, ENST00000429383.8, ENST00000429924.6, ENST00000430169.5, ENST00000433533.5, ENST00000443386.5, ENST00000443499.6, ENST00000444471.5, ENST00000444756.5, ENST00000445294.5, ENST00000446818.6, ENST00000446863.5, ENST00000452492.6, ENST00000465884.1, ENST00000471679.1, ENST00000480435.5, ENST00000481396.5, ENST00000485432.1, ENST00000497531.5, ENST00000507877.5

Found 722 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCAAGGAGGTGGTGAGCTTGCTGGGGGCCACAGAAGCACAGGATaGAGAGGACCGAGAGGACCTGCCTCTAGTGTGCAGCAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: LQGGGELAGGHRSTG*RGPRGPASSVQQGW
Trigger: CCAGCCCTGCTGCACACTAGAGGCAGGTCCTCTCGGTCCTCTCCATCCTGTGCTTCTGTGGCCCCCAGCAAGCTCACCACCTCCTTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 90 bp CAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCTaGGCACAGGCCCTGCAGTACCTACACTTGACTTCCAAGAAGGGA +
Preference number: 1 (lower is better)
Translates to: QTRSRQWGPGYGVHS*AQALQYLHLTSKKG
Trigger: TCCCTTCTTGGAAGTCAAGTGTAGGTACTGCAGGGCCTGTGCTCAGCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp GGGCCAGGGGCCAGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTaGTTGGAGCCGCCACAGAACGGCCACTCTATGTGGGGACCTAAG +
Preference number: 1 (lower is better)
Translates to: GPGARCVSAGKEGWN*LEPPQNGHSMWGPK
Trigger: CTTAGGTCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGCCCCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 90 bp GGACAGGCTCAAAGAGCTAGTCATCCCTGGCATGGCTGCTCTCCCTaGTGGAGGCGAGACAGGCACTGTGTCCCTCTGCCATCCTCACCC +
Preference number: 1 (lower is better)
Translates to: GQAQRASHPWHGCSP*WRRDRHCVPLPSSP
Trigger: GGGTGAGGATGGCAGAGGGACACAGTGCCTGTCTCGCCTCCATCAGGGAGAGCAGCCATGCCAGGGATGACTAGCTCTTTGAGCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp CAGGGGCCAGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTGGTTaGAGCCGCCACAGAACGGCCACTCTATGTGGGGACCTAAGTCCT +
Preference number: 1 (lower is better)
Translates to: QGPGVCPQERRDGIG*SRHRTATLCGDLSP
Trigger: AGGACTTAGGTCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp ATGGCTGCTCTCCCTGATGGAGGCGAGACAGGCACTGTGTCCCTCTaGCATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: MAALPDGGETGTVSL*HPHPLLLEFLRRQR
Trigger: CCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATGGCAGAGGGACACAGTGCCTGTCTCGCCTCCATCAGGGAGAGCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp AGCCAACTGCAGGGAGCCAGCGGAGAGCCTTATTGGCATGGTGGGTaGCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGAC +
Preference number: 1 (lower is better)
Translates to: SQLQGASGEPYWHGG*LVTLAGRVTLSYHD
Trigger: GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATGCCAATAAGGCTCTCCGCTGGCTCCCTGCAGTTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp GGATGGAGAGGACCGAGAGGACCTGCCTCTAGTGTGCAGCAGGGCTaGGAGTTTTCAGTGACTATTAAACACCCAGCCAACTGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: GWRGPRGPASSVQQG*EFSVTIKHPANCRE
Trigger: CTCCCTGCAGTTGGCTGGGTGTTTAATAGTCACTGAAAACTCCCAGCCCTGCTGCACACTAGAGGCAGGTCCTCTCGGTCCTCTCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp CAGAGCCAGAAGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTaGCCAGTGGTTGAAGGTCAGACAACCTGCTGTCTGGCAAAACCA +
Preference number: 1 (lower is better)
Translates to: QSQKPGSYCVHLPGN*PVVEGQTTCCLAKP
Trigger: TGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTTCTGGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp AGAGGAACACTCAGAGCCAGAAGCCAGGGAGCTACTGTGTGCATCTaGCAGGCAATTGCCCAGTGGTTGAAGGTCAGACAACCTGCTGTC +
Preference number: 1 (lower is better)
Translates to: RGTLRARSQGATVCI*QAIAQWLKVRQPAV
Trigger: GACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTTCTGGCTCTGAGTGTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp GTGCTGAGAGGAACACTCAGAGCCAGAAGCCAGGGAGCTACTGTGTaGATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCAGACAACCT +
Preference number: 1 (lower is better)
Translates to: VLRGTLRARSQGATV*ICQAIAQWLKVRQP
Trigger: AGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTTCTGGCTCTGAGTGTTCCTCTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp GATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTaGGAACAGCTCTACACCTCTTACCTTAGAACTGAAAACACTGAC +
Preference number: 1 (lower is better)
Translates to: DGQVCGPFQSVPEPW*EQLYTSYLRTENTD
Trigger: GTCAGTGTTTTCAGTTCTAAGGTAAGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp AGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTaGTGGGAACAGCTCTACACCTCTTACCTTAGAACTGAAAACACT +
Preference number: 1 (lower is better)
Translates to: RDGQVCGPFQSVPEP*WEQLYTSYLRTENT
Trigger: AGTGTTTTCAGTTCTAAGGTAAGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp AGCAGCTTCCTTAGCAACCCCAGGGCTGACAGCACAAGAGTCAACTaGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTTAT +
Preference number: 1 (lower is better)
Translates to: SSFLSNPRADSTRVN*SSAGKANHREVLVY
Trigger: ATAAACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGCTGTCAGCCCTGGGGTTGCTAAGGAAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTG +
Preference number: 1 (lower is better)
Translates to: SKGWTNAKCMPGRKQ*FKKVLHWMSLSLAL
Trigger: CAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR TCA 90 bp GCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTaGAGGTCAGACAACCTGCTGTCTGGCAAAACCAGTTATTATTCA +
Preference number: 1 (lower is better)
Translates to: ARELLCASARQLPSG*RSDNLLSGKTSYYS
Trigger: TGAATAATAACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp AGAAGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTaGTTGAAGGTCAGACAACCTGCTGTCTGGCAAAACCAGTTATTA +
Preference number: 1 (lower is better)
Translates to: RSQGATVCICQAIAQ*LKVRQPAVWQNQLL
Trigger: TAATAACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 90 bp CCAGGGATCTTCTTTAAGGAGAGAAACAGCTCATGTGATGCTCTGTaGCCATCATGGTTTCCTAAGGTGCTGACTGACAAGGGGGAGAGT +
Preference number: 1 (lower is better)
Translates to: PGIFFKERNSSCDAL*PSWFPKVLTDKGES
Trigger: ACTCTCCCCCTTGTCAGTCAGCACCTTAGGAAACCATGATGGGCACAGAGCATCACATGAGCTGTTTCTCTCCTTAAAGAAGATCCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp TGCCAGGCAATTGCCCAGTGGTTGAAGGTCAGACAACCTGCTGTCTaGCAAAACCAGTTATTATTCACCTTACATGCTGATGTGGTAAGA +
Preference number: 1 (lower is better)
Translates to: CQAIAQWLKVRQPAV*QNQLLFTLHADVVR
Trigger: TCTTACCACATCAGCATGTAAGGTGAATAATAACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 90 bp ACTGCTACCTTAAGGCCAATGAGGGATTCTGACTTTGGGTGGGAATaGACTTGGGTTTTTCCCTTTATTCCTCAGTTGACAGGTATATAC +
Preference number: 1 (lower is better)
Translates to: TATLRPMRDSDFGWE*TWVFPFIPQLTGIY
Trigger: GTATATACCTGTCAACTGAGGAATAAAGGGAAAAACCCAAGTTCATTCCCACCCAAAGTCAGAATCCCTCATTGGCCTTAAGGTAGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 90 bp AATTCTCTGTCTTATGACTGCTACCTTAAGGCCAATGAGGGATTCTaGCTTTGGGTGGGAATGAACTTGGGTTTTTCCCTTTATTCCTCA +
Preference number: 1 (lower is better)
Translates to: NSLSYDCYLKANEGF*LWVGMNLGFSLYSS
Trigger: TGAGGAATAAAGGGAAAAACCCAAGTTCATTCCCACCCAAAGTCAGAATCCCTCATTGGCCTTAAGGTAGCAGTCATAAGACAGAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 90 bp CTCCCTTCATCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATG +
Preference number: 1 (lower is better)
Translates to: LPSSCERGLLIIKSC*PTTFLGLVICISLM
Trigger: CATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGAAGGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452492.6
3UTR-3UTR CCA 90 bp TGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGTGGCTAGATCCCTGTaGGGCAGGACTGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: CPGMARSVVLSSLSQSPGVARSL*GRTGHC
Trigger: ACAGTGCCCAGTCCTGCCCCACAGGGATCTAGCCAC...ACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp CCAGGGGCCAGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTGGTaGGAGCCGCCACAGAACGGCCACTCTATGTGGGGACCTAAGTCC +
Preference number: 2 (lower is better)
Translates to: PGARCVSAGKEGWNW*EPPQNGHSMWGPKS
Trigger: GGACTTAGGTCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGACCCGGTCCCGGCAGTaGGGCCCAGGATACGGGGTT +
Preference number: 2 (lower is better)
Translates to: AQESTGHLQARQITGRSWTRSRQ*GPGYGV
Trigger: AACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGT...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp TGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: CPGMARSVVLSSLSQSPGKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...ACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp AGCCTGTGGGAATTTGAGGCTGGTACTACCCATGACCCACTGTCCTaGTATGTCTCTCTCCTCCAAGGAGGTGGTGAGCTTGCTGGGGGC +
Preference number: 2 (lower is better)
Translates to: SLWEFEAGTTHDPLS*YVSLLQGGGELAGG
Trigger: GCCCCCAGCAAGCTCACCACCTCCTTGGAGGAGAGAGACATACAAGGACAGTGGGTCATGGGTAGTACCAGCCTCAAATTCCCACAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGGGGGCCACTGAAGGGTaGCTAGATCCCTGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGGATEG*LDPCGA
Trigger: TGCCCCACAGGGATCTAGCCACCCTTCAGTGGCCCC...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR TCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACTGGCCTTGGGGCCACTaGAGGGTGGCTAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHWPWGH*RVARSL
Trigger: CAGGGATCTAGCCACCCTTCAGTGGCCCCAAGGCCA...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTCTTACTCAGAGGTGCTaGGAGGAACACTCAGAGCCA +
Preference number: 2 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSLTQRC*EEHSEP
Trigger: TGGCTCTGAGTGTTCCTCTCAGCACCTCTGAGTAAG...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR GCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTGGACCAATGCAAAATaGATGCCGGGAAGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTWTNAK*MPGRKQ
Trigger: CTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR GCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTGACCAATGGCAACCCTaGACAGTTGCAAGGTCACTC +
Preference number: 2 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSDQWQP*TVARSL
Trigger: GAGTGACCTTGCAACTGTGCAGGGTTGCCATTGGTC...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CCA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACCCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCAC +
Preference number: 2 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYPGRKQ*FKKVLH
Trigger: GTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGG...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGGCCTTGGGGCCACTaGAGGGTGGCTAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: MQNACREGSSGLRRFSTGWPWGH*RVARSL
Trigger: CAGGGATCTAGCCACCCTTCAGTGGCCCCAAGGCCA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGTGGCTAGATCCCTGTaGGGCAGGACTGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKVARSL*GRTGHC
Trigger: ACAGTGCCCAGTCCTGCCCCACAGGGATCTAGCCAC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CCA 90 bp TGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTAATCCTGCATCCTCTTaGCATGTGGAATGTTCTCTA +
Preference number: 2 (lower is better)
Translates to: CPGMARSVVLSSLSQSPGNPASS*HVECSL
Trigger: TAGAGAACATTCCACATGCCAAGAGGATGCAGGATT...ACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACCCTGCTGCCCAGGGATaGCCAGGTCTGTGGTCCTTT +
Preference number: 2 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHPAAQG*PGLWSF
Trigger: AAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGG...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp AGTAACACTGAGAAAGCAGTCTGGCCTTTGAGAAGGAAGCCTGGCTaGCCAGGTGCCATCCTCAATGTATCCGGCCTCTTCTCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: SNTEKAVWPLRRKPG*PGAILNVSGLFSLL
Trigger: GAGCAGAGAGAAGAGGCCGGATACATTGAGGATGGCACCTGGCAAGCCAGGCTTCCTTCTCAAAGGCCAGACTGCTTTCTCAGTGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR GCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGCCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: AQESTGHLQARQITGRSWPMQNA*REGSSG
Trigger: ACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGG...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCAAGAGCAAGAGTCGGGTaGGGATTAGGTAAGGGCCCA +
Preference number: 2 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKARARVG*GLGKGP
Trigger: TGGGCCCTTACCTAATCCCCACCCGACTCTTGCTCT...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACAGGAATAAAGTAGGCTaGGACAGATTTCCACAGAGG +
Preference number: 2 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDRNKVG*DRFPQR
Trigger: CCTCTGTGGAAATCTGTCTCAGCCTACTTTATTCCT...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAAGCCTCTGTGCTTTGTaGCCATATATGCTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQSLCAL*PYMLLS
Trigger: AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CCA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGACACAGAAGCACAGGATaGAGAGGACCGAGAGGACCT +
Preference number: 2 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRHRSTG*RGPRGP
Trigger: AGGTCCTCTCGGTCCTCTCCATCCTGTGCTTCTGTG...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTaGAAGGTCAGACAACCTGCTGTCTGGCAAAACCAGTTATTATTC +
Preference number: 2 (lower is better)
Translates to: SQGATVCICQAIAQW*KVRQPAVWQNQLLF
Trigger: GAATAATAACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGATTTCATTTGTTACCATaGAGGCCTCCACTGCCCGGC +
Preference number: 2 (lower is better)
Translates to: STVADLRVSHHFLGGQVGFHLLP*RPPLPG
Trigger: GCCGGGCAGTGGAGGCCTTCATGGTAACAAATGAAA...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTGGCCTTGGGGCCACTaGAGGGTGGCTAGATCCCTG +
Preference number: 2 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQWPWGH*RVARSL
Trigger: CAGGGATCTAGCCACCCTTCAGTGGCCCCAAGGCCA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR TCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGATTGATGGCCAAAGTTaGTATGGCCTAAGGATTGGA +
Preference number: 2 (lower is better)
Translates to: AQESTGHLQARQITGRSWIDGQS*YGLRIG
Trigger: TCCAATCCTTAGGCCATATCAACTTTGGCCATCAAT...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGGGGGCCACTGAAGGGTaGCTAGATCCCTGTGGGGCA +
Preference number: 2 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKGATEG*LDPCGA
Trigger: TGCCCCACAGGGATCTAGCCACCCTTCAGTGGCCCC...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
3UTR CAA 90 bp ACAGGCCCTGCAGTACCTACACTTGACTTCCAAGAAGGGAAGGGGTaGTGTAGAAATCCTGCATCCTCTTGGCATGTGGAATGTTCTCTA +
Preference number: 2 (lower is better)
Translates to: TGPAVPTLDFQEGKG*CRNPASSWHVECSL
Trigger: TAGAGAACATTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTCTTGGAAGTCAAGTGTAGGTACTGCAGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAAAGGGCTGGACCAATaGAAAATGCATGCCGGGAAG +
Preference number: 2 (lower is better)
Translates to: LHVANLSLCALWPYMLLSKGLDQ*KMHAGK
Trigger: CTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGTGGCTAGATCCCTGTaGGGCAGGACTGGGCACTGT +
Preference number: 2 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQVARSL*GRTGHC
Trigger: ACAGTGCCCAGTCCTGCCCCACAGGGATCTAGCCAC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR TCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTATTCACCTTACATGCTaGTGTGGTAAGAGGAGAGTT +
Preference number: 2 (lower is better)
Translates to: TRVNWSSAGKANHREVLVIHLTC*CGKRRV
Trigger: AACTCTCCTCTTACCACATCAGCATGTAAGGTGAAT...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTTTCTTGGAGGGCAGGTaGGAAATCATGTCATTATCA +
Preference number: 2 (lower is better)
Translates to: TRVNWSSAGKANHREVLVFLEGR*EIMSLS
Trigger: TGATAATGACATGATTTCCCACCTGCCCTCCAAGAA...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp AAAAAGAGAGCTTTAGTAAGTAACACTGAGAAAGCAGTCTGGCCTTaGAGAAGGAAGCCTGGCTTGCCAGGTGCCATCCTCAATGTATCC +
Preference number: 2 (lower is better)
Translates to: KKRALVSNTEKAVWP*RRKPGLPGAILNVS
Trigger: GGATACATTGAGGATGGCACCTGGCAAGCCAGGCTTCCTTCTCAAAGGCCAGACTGCTTTCTCAGTGTTACTTACTAAAGCTCTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR GCA 90 bp AAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: KRIIDHQILLANNLPRVGIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...ACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCCTTGGCTTTCCACAGTaGTGGGATTACAGCTGTGAG +
Preference number: 2 (lower is better)
Translates to: TITTCCNLKPLGLSNISILGFPQ*WDYSCE
Trigger: CTCACAGCTGTAATCCCAGCACTGTGGAAAGCCAAG...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
3UTR-3UTR CCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCACAAATCTTCCCACCTTaGCTTTCCACAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: ITTCCNLKPLGLSNISISQIFPP*LSTVLG
Trigger: TCCCAGCACTGTGGAAAGCCAAGGTGGGAAGATTTG...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR-3UTR GCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKPMQNA*REGSSG
Trigger: ACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
3UTR-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQPMQNA*REGSSG
Trigger: ACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR GCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTAGCTTAGATCCTGTTTaGAGAGATCCTTATAACTTT +
Preference number: 2 (lower is better)
Translates to: TRVNWSSAGKANHREVLVSLDPV*RDPYNF
Trigger: AAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCT...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR GCA 90 bp TGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: WPTTFLGLVICISLMLLYLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp GATCGAAGTTCTTTATCTTGGAAGAATTTGTTCCAAAGACTCCCTTCATCCTGTCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 2 (lower is better)
Translates to: DRSSLSWKNLFQRLPSSCLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...ACAGGATGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAAAGAACTTCGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452492.6
3UTR-3UTR GCA 90 bp TCATCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: SSCERGLLIIKSCWPTTFASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...GAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp TGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: WPTTFLGLVICISLMLLYASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...GTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp CAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 2 (lower is better)
Translates to: QILLANNLPRVGNMYFFNASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...ATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCAATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
3UTR-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCAGGGTCTCAGTATGTTaGTCAGGCTGGTCTCAAATT +
Preference number: 2 (lower is better)
Translates to: TITTCCNLKPLGLSNISIRVSVC*SGWSQI
Trigger: AATTTGAGACCAGCCTGAGCAACATACTGAGACCCT...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR-3UTR TCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCCAATTGCCCAGTGGTTaGAGGTCAGACAACCTGCTG +
Preference number: 2 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYIQLPSG*RSDNLL
Trigger: CAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTG...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGAGCCTCTGTGCTTTGTaGCCATATATGCTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQSLCAL*PYMLLS
Trigger: AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR CAA 90 bp ACCATTTTCTTGGAGGGCAGGTGGGAAATCATGTCATTATCACATTaGTCTATAGAGATATATAAGGTTAGCAGTGGGAGGGACGTAAAC +
Preference number: 2 (lower is better)
Translates to: TIFLEGRWEIMSLSH*SIEIYKVSSGRDVN
Trigger: GTTTACGTCCCTCCCACTGCTAACCTTATATATCTCTATAGACAAATGTGATAATGACATGATTTCCCACCTGCCCTCCAAGAAAATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 90 bp AAGAATTTGTTCCAAAGACTCCCTTCATCCTGTGAAAGAGGATTATaGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTA +
Preference number: 2 (lower is better)
Translates to: KNLFQRLPSSCERGL*IIKSCWPTTFLGLV
Trigger: TACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGAAGGGAGTCTTTGGAACAAATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452492.6
3UTR-3UTR CCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCAGGGGTTTCAAAGGGCTaGACCAATGCAAAATGCATG +
Preference number: 2 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSGVSKG*TNAKCM
Trigger: CATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCC...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR TCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCCCTTTATTCCTCAGTTaGCAGGTATATACAGCTCTG +
Preference number: 2 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYIPLFLS*QVYTAL
Trigger: CAGAGCTGTATATACCTGTCAACTGAGGAATAAAGG...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 72 bp TCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCTaGGCACAGGCCCTGCAGTACCTACACTTGACTTCC +
Preference number: 3 (lower is better)
Translates to: SRQWGPGYGVHS*AQALQYLHLTS
Trigger: GGAAGTCAAGTGTAGGTACTGCAGGGCCTGTGCTCAGCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp CAGGGAGCCAGCGGAGAGCCTTATTGGCATGGTGGGTaGCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGC +
Preference number: 3 (lower is better)
Translates to: QGASGEPYWHGG*LVTLAGRVTLS
Trigger: GCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATGCCAATAAGGCTCTCCGCTGGCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp CCAGGGGCCAGGTGTGTGTCCGCAGGAAAGGAGGGATaGAATTGGTTGGAGCCGCCACAGAACGGCCACTCT +
Preference number: 3 (lower is better)
Translates to: PGARCVSAGKEG*NWLEPPQNGHS
Trigger: AGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGCCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp ACTGCAGGGAGCCAGCGGAGAGCCTTATTGGCATGGTaGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCT +
Preference number: 3 (lower is better)
Translates to: TAGSQRRALLAW*VPSDSCRASDP
Trigger: AGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATGCCAATAAGGCTCTCCGCTGGCTCCCTGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp CCAACTGCAGGGAGCCAGCGGAGAGCCTTATTGGCATaGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGAC +
Preference number: 3 (lower is better)
Translates to: PTAGSQRRALLA*WVPSDSCRASD
Trigger: GTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATGCCAATAAGGCTCTCCGCTGGCTCCCTGCAGTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp CTCCCTGATGGAGGCGAGACAGGCACTGTGTCCCTCTaGCATCCTCACCCACTCCTGTTAGAATTCCTGCGC +
Preference number: 3 (lower is better)
Translates to: LPDGGETGTVSL*HPHPLLLEFLR
Trigger: GCGCAGGAATTCTAACAGGAGTGGGTGAGGATGGCAGAGGGACACAGTGCCTGTCTCGCCTCCATCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTGGTTaGAGCCGCCACAGAACGGCCACTCTATGTGGGGAC +
Preference number: 3 (lower is better)
Translates to: GVCPQERRDGIG*SRHRTATLCGD
Trigger: GTCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GCCAGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTaGTTGGAGCCGCCACAGAACGGCCACTCTATGTGG +
Preference number: 3 (lower is better)
Translates to: ARCVSAGKEGWN*LEPPQNGHSMW
Trigger: CCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTAGCCTCAGTCTGGCCTaGGGGCCACTGAAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVSLSLA*GPLKGG
Trigger: GCCACCCTTCAGTGGCCCCAAGGCCAGACTGAGGCT...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CAA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACGGCAACCCTGCACAGTaGCAAGGTCACTCGCTGTAT +
Preference number: 3 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDGNPAQ*QGHSLY
Trigger: ATACAGCGAGTGACCTTGCAACTGTGCAGGGTTGCC...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAAGCCTCAGTCTGGCCTaGGGGCCACTGAAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: MQNACREGSSGLRRFSTGSLSLA*GPLKGG
Trigger: GCCACCCTTCAGTGGCCCCAAGGCCAGACTGAGGCT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCTCAAATCTTCCCACCTaGGCTTTCCACAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: AIFPSQPLGQLGLQARATSNLPT*AFHSAG
Trigger: CCCAGCACTGTGGAAAGCCAAGGTGGGAAGATTTGA...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR TCA 72 bp CTGCCTCTAGTGTGCAGCAGGGCTGGGAGTTTTCAGTaGCTATTAAACACCCAGCCAACTGCAGGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: LPLVCSRAGSFQ*LLNTQPTAGSQ
Trigger: CTGGCTCCCTGCAGTTGGCTGGGTGTTTAATAGTCACTGAAAACTCCCAGCCCTGCTGCACACTAGAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp AAGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTaGCCAGTGGTTGAAGGTCAGACAACCTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: KPGSYCVHLPGN*PVVEGQTTCCL
Trigger: CAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp CTCAGAGCCAGAAGCCAGGGAGCTACTGTGTGCATCTaGCAGGCAATTGCCCAGTGGTTGAAGGTCAGACAA +
Preference number: 3 (lower is better)
Translates to: LRARSQGATVCI*QAIAQWLKVRQ
Trigger: TTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCTTCTGGCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GGACCGAGAGGACCTGCCTCTAGTGTGCAGCAGGGCTaGGAGTTTTCAGTGACTATTAAACACCCAGCCAAC +
Preference number: 3 (lower is better)
Translates to: GPRGPASSVQQG*EFSVTIKHPAN
Trigger: GTTGGCTGGGTGTTTAATAGTCACTGAAAACTCCCAGCCCTGCTGCACACTAGAGGCAGGTCCTCTCGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTaGTTGAAGGTCAGACAACCTGCTGTCTGGCAAAAC +
Preference number: 3 (lower is better)
Translates to: GATVCICQAIAQ*LKVRQPAVWQN
Trigger: GTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp AATTGGTTGGAGCCGCCACAGAACGGCCACTCTATGTaGGGACCTAAGTCCTCCGTACACACTCCTGTTCTA +
Preference number: 3 (lower is better)
Translates to: NWLEPPQNGHSM*GPKSSVHTPVL
Trigger: TAGAACAGGAGTGTGTACGGAGGACTTAGGTCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACTAAGCCTCTGTGCTTaGTGGCCATATATGCTTCTC +
Preference number: 3 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQLSLCA*WPYMLL
Trigger: GAGAAGCATATATGGCCACAAAGCACAGAGGCTTAG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR GCA 72 bp TGGGAGTTTTCAGTGACTATTAAACACCCAGCCAACTaGAGGGAGCCAGCGGAGAGCCTTATTGGCATGGTG +
Preference number: 3 (lower is better)
Translates to: WEFSVTIKHPAN*REPAESLIGMV
Trigger: CACCATGCCAATAAGGCTCTCCGCTGGCTCCCTGCAGTTGGCTGGGTGTTTAATAGTCACTGAAAACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTaGGAACAGCTCTACACCTCTTACCTTAGAACTGAA +
Preference number: 3 (lower is better)
Translates to: VCGPFQSVPEPW*EQLYTSYLRTE
Trigger: TTCAGTTCTAAGGTAAGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGAAATCCTGCATCCTCTaGGCATGTGGAATGTTCTCT +
Preference number: 3 (lower is better)
Translates to: AQESTGHLQARQITGRSWKSCIL*ACGMFS
Trigger: AGAGAACATTCCACATGCCAAGAGGATGCAGGATTT...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp CCCGCGGCTTTTACAAAGTGTTGTCATAGGGATATGTaGTTGGCAGCAGCTTACTCAGAGGTGCTGAGAGGA +
Preference number: 3 (lower is better)
Translates to: PAAFTKCCHRDM*LAAAYSEVLRG
Trigger: TCCTCTCAGCACCTCTGAGTAAGCTGCTGCCAAGCACATATCCCTATGACAACACTTTGTAAAAGCCGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GAGAGAAACAGCTCATGTGATGCTCTGTGCCCATCATaGTTTCCTAAGGTGCTGACTGACAAGGGGGAGAGT +
Preference number: 3 (lower is better)
Translates to: ERNSSCDALCPS*FPKVLTDKGES
Trigger: ACTCTCCCCCTTGTCAGTCAGCACCTTAGGAAACCATGATGGGCACAGAGCATCACATGAGCTGTTTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCGAGTTTAAGAGCAAATaGCAGAACCAATTAGAACCC +
Preference number: 3 (lower is better)
Translates to: SQGATVCICQAIAQWLKVEFKSK*QNQLEP
Trigger: GGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTC...GACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGACATAGGGATATGTGCTaGGCAGCAGCTTACTCAGAG +
Preference number: 3 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRHRDMC*AAAYSE
Trigger: CTCTGAGTAAGCTGCTGCCAAGCACATATCCCTATG...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp AAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: KGFQRAGPMQNA*REGSSGLRRFS
Trigger: GGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR CCA 72 bp TGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: WTNAKCMPGRKQ*FKKVLHWMSLS
Trigger: ACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR-3UTR CAA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCACCCATGTCTGATGCTTaGAGGGATAGAAGATACGAA +
Preference number: 3 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAPMSDA*RDRRYE
Trigger: TTCGTATCTTCTATCCCTCAAAGCATCAGACATGGG...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR GCA 72 bp CCAGGCAATTGCCCAGTGGTTGAAGGTCAGACAACCTaGTGTCTGGCAAAACCAGTTATTATTCACCTTACA +
Preference number: 3 (lower is better)
Translates to: PGNCPVVEGQTT*CLAKPVIIHLT
Trigger: TGTAAGGTGAATAATAACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CCA 72 bp GAAGGGAAGGGGTTGTGTAGAAATCCTGCATCCTCTTaGCATGTGGAATGTTCTCTAGGTATCCTTATTCCC +
Preference number: 3 (lower is better)
Translates to: EGKGLCRNPASS*HVECSLGILIP
Trigger: GGGAATAAGGATACCTAGAGAACATTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGCAAGAAGGGAAGGGGTaGTGTAGAAATCCTGCATCC +
Preference number: 3 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQQEGKG*CRNPAS
Trigger: GGATGCAGGATTTCTACACAACCCCTTCCCTTCTTG...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 72 bp TGCGATATGGCTTCCCAATGCAGGAATAAAGTAGGCTaGGACAGATTTCCACAGAGGAAGCTTTCTTGGTAT +
Preference number: 3 (lower is better)
Translates to: CDMASQCRNKVG*DRFPQRKLSWY
Trigger: ATACCAAGAAAGCTTCCTCTGTGGAAATCTGTCTCAGCCTACTTTATTCCTGCATTGGGAAGCCATATCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
3UTR TCA 72 bp TCTTATGACTGCTACCTTAAGGCCAATGAGGGATTCTaGCTTTGGGTGGGAATGAACTTGGGTTTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: SYDCYLKANEGF*LWVGMNLGFSL
Trigger: AAGGGAAAAACCCAAGTTCATTCCCACCCAAAGTCAGAATCCCTCATTGGCCTTAAGGTAGCAGTCATAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR TCA 72 bp AACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATaGCTGCCACAGAGTTTGATATTTGTTCAGCATCTC +
Preference number: 3 (lower is better)
Translates to: NSDSQVILRRPA*LPQSLIFVQHL
Trigger: GAGATGCTGAACAAATATCAAACTCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATATTTGTTGTTTTGTGTaGGTAGAGACAGGGTCTCAG +
Preference number: 3 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHICCFV*VETGSQ
Trigger: CTGAGACCCTGTCTCTACCAACACAAAACAACAAAT...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR-3UTR CAA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCCATGACCCACTGTCCTaGTATGTCTCTCTCCTCCAA +
Preference number: 3 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYIHDPLS*YVSLLQ
Trigger: TTGGAGGAGAGAGACATACAAGGACAGTGGGTCATG...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR-3UTR CAA 90 bp TTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 3 (lower is better)
Translates to: LIIKSCWPTTFLGLVICISPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...AATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
3UTR-3UTR CAA 90 bp TCATCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 3 (lower is better)
Translates to: SSCERGLLIIKSCWPTTFSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...GAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
3UTR CCA 72 bp TCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGGTTGGTAATATGTATT +
Preference number: 3 (lower is better)
Translates to: SCERGLLIIKSC*PTTFLGLVICI
Trigger: AATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR TCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCAGGGAGAGGTGGCAGTaGGCCGAGATCGAGCCACTG +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSRERWQ*AEIEPL
Trigger: CAGTGGCTCGATCTCGGCTCACTGCCACCTCTCCCT...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCGGGGACTCACAATGGTaGAGCCAGAGTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSGDSQW*SQSPCC
Trigger: GCAGCAAGGACTCTGGCTTCACCATTGTGAGTCCCC...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTTGGCCTTGGGGCCACTaGAGGGTGGCTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: CPGMARSVVLSSLSQSPGWPWGH*RVARSL
Trigger: CAGGGATCTAGCCACCCTTCAGTGGCCCCAAGGCCA...ACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCCGAAGAGGCTGGGCCTaGCCGGAGAAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTRRGWA*PEKEPL
Trigger: CAGGGGCTCCTTCTCCGGCCAGGCCCAGCCTCTTCG...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCTATTGGCATGGTGGGTaGCTAGTGACTCTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSYWHGG*LVTLAG
Trigger: CCCTGCAAGAGTCACTAGGCACCCACCATGCCAATA...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCCCTTGGCCTCGGCCCTaGCCCTGGCCGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAPWPRP*PWPLEQ
Trigger: CTGCTCCAGCGGCCAGGGCCAGGGCCGAGGCCAAGG...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCAAGTGTTTGAAACCATaGGGGAGAGGTGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSKCLKP*GRGGSE
Trigger: CTCACTGCCACCTCTCCCTCATGGTTTCAAACACTT...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCCCTCTCTACAGTAGCTaGCTTGAGAGTGAGTCACCA +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSPLYSS*LESESP
Trigger: TGGTGACTCACTCTCAAGTCAGCTACTGTAGAGAGG...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCCTTGGCCTCGGCCCTaGCCCTGGCCGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGPWPRP*PWPLEQ
Trigger: CTGCTCCAGCGGCCAGGGCCAGGGCCGAGGCCAAGG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGACCTTGGCCTCGGCCCTaGCCCTGGCCGCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRPWPRP*PWPLEQ
Trigger: CTGCTCCAGCGGCCAGGGCCAGGGCCGAGGCCAAGG...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGACCCGGTCCCGGCAGTaGGGCCCAGGATACGGGGTT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGTRSRQ*GPGYGV
Trigger: AACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCCTGAGTATGAGCCTGTaGGAATTTGAGGCTGGTACT +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSLSMSL*EFEAGT
Trigger: AGTACCAGCCTCAAATTCCCACAGGCTCATACTCAG...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp CAAGGTGAGAAAGTGACCAATGGCAACCCTGCACAGTaGCAAGGTCACTCGCTGTATGGGGGCCCCGCGGCT +
Preference number: 4 (lower is better)
Translates to: QGEKVTNGNPAQ*QGHSLYGGPAA
Trigger: AGCCGCGGGGCCCCCATACAGCGAGTGACCTTGCAACTGTGCAGGGTTGCCATTGGTCACTTTCTCACCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp GGCCAGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATaGGTTGGAGCCGCCACAGAACGGCCACTCTATGTG +
Preference number: 4 (lower is better)
Translates to: GQVCVRRKGGME*VGAATERPLYV
Trigger: CACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGCTTGGGGCCTCTGCTaGGGTCCTGGTAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTAWGLC*GPGRNY
Trigger: GTAATTCCTACCAGGACCTCAGCAGAGGCCCCAAGC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGCAGGGCCACCTGCACTaGCTGGAGCCATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGQGHLH*LEPLLG
Trigger: CCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTG...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGCATGAAGGCCTCCACTaGCCGGCTGCCTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGHEGLH*PAASPS
Trigger: GGATGGCGAGGCAGCCGGGCAGTGGAGGCCTTCATG...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACAAACACCCAGCCAACTaGAGGGAGCCAGCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDKHPAN*REPAES
Trigger: GCTCTCCGCTGGCTCCCTGCAGTTGGCTGGGTGTTT...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGTCAGGGGAGCACCTTTaGCATTGGTCCGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPESGEHL*HWSGFY
Trigger: ATAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGA...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCGAAGAGGCTGGGCCTaGCCGGAGAAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGRRGWA*PEKEPL
Trigger: CAGGGGCTCCTTCTCCGGCCAGGCCCAGCCTCTTCG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGTCCCAGAGCCCTGGTaGGAACAGCTCTACACCTCT +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTVPEPW*EQLYTS
Trigger: AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGAC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCTGTTATCTGACCCTGTaGCATACACTCAAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSCYLTL*HTLKVR
Trigger: CCTTACCTTGAGTGTATGCCACAGGGTCAGATAACA...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAGGGGACTCACAATGGTaGAGCCAGAGTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQGDSQW*SQSPCC
Trigger: GCAGCAAGGACTCTGGCTTCACCATTGTGAGTCCCC...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAATGCCTCGCCATCCTCTaGGGACAGGCTCAAAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQCLAIL*GQAQRA
Trigger: AGCTCTTTGAGCCTGTCCTCAGAGGATGGCGAGGCA...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGGATTGCAGTTACCTCTaGACATTAGCAGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPEDCSYL*TLAGGQ
Trigger: CTGACCTCCTGCTAATGTTCAGAGGTAACTGCAATC...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQTTRRS*RGNSRP
Trigger: TGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTCAGGCTGAGGCCGTCTaGAAACAAGGCATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSQAEAV*KQGIPD
Trigger: GTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTG...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACAGGCTGAGGCCGTCTaGAAACAAGGCATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQQAEAV*KQGIPD
Trigger: GTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCAGGGCCACCTGCACTaGCTGGAGCCATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGQGHLH*LEPLLG
Trigger: CCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAAGGAGCTACTGCTGTTaGCTCCAGGTACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQRSYCC*LQVQGH
Trigger: GTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGAATTCCCTCTATCAGTaGACCCTGGCGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPENSLYQ*TLAFLK
Trigger: CTTCAGAAACGCCAGGGTGCACTGATAGAGGGAATT...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAGGGTGCGAAGAGGCTaGGCCTGGCCGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGRVRRG*AWPEKE
Trigger: CTCCTTCTCCGGCCAGGCCCAGCCTCTTCGCACCCT...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAGAGCAGACTGGGGCCTaGCTTTTCCCAGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQEQTGA*LFPEVL
Trigger: AAGCACCTCTGGGAAAAGCCAGGCCCCAGTCTGCTC...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
3UTR CAA 72 bp AGGTGTGTGTCCGCAGGAAAGGAGGGATGGAATTGGTaGGAGCCGCCACAGAACGGCCACTCTATGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RCVSAGKEGWNW*EPPQNGHSMWG
Trigger: TCCCCACATAGAGTGGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGCGGACACACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGAGTGTACATCCCCGATaGATGGGTAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPESVHPR*MGNASE
Trigger: TTCTGATGCATTACCCATTCATCGGGGATGTACACT...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACAAGGTGGAGAGCCAGTaGATTCTCTTCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYKVESQ*ILFLQA
Trigger: TGCCTGGAGGAAGAGAATTCACTGGCTCTCCACCTT...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTGGCCTTGGGGCCACTaGAGGGTGGCTAGATCCCTG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGWPWGH*RVARSL
Trigger: CAGGGATCTAGCCACCCTTCAGTGGCCCCAAGGCCA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGGCTGGTACTACCCATaGCCCACTGTCCTTGTATGT +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTGWYYP*PTVLVC
Trigger: ACATACAAGGACAGTGGGTCATGGGTAGTACCAGCC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGAGGAGGCATTCCTGTTaGGAGCGGGCAACTAACCCC +
Preference number: 4 (lower is better)
Translates to: AQESTGHLQARQITGRSWRRHSC*ERATNP
Trigger: GGGGTTAGTTGCCCGCTCTCAACAGGAATGCCTCCT...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGAGGTACAGGGCCACCTaGACTGCCTGGAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGRYRAT*TAWSHC
Trigger: GCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCAAGTACTCTCTCCCTCAGTCTaGAGGGCGCTCGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: PAASQLPINPLLPYCCQVLSPSV*RALAEA
Trigger: CGCTTCCGCGAGCGCCCTGCAGACTGAGGGAGAGAG...TACTTGGCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCAGGGTGCGAAGAGGCTaGGCCTGGCCGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFRVRRG*AWPEKE
Trigger: CTCCTTCTCCGGCCAGGCCCAGCCTCTTCGCACCCT...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAAGAGCAAGAGTCGGGTaGGGATTAGGTAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQRARVG*GLGKGP
Trigger: TGGGCCCTTACCTAATCCCCACCCGACTCTTGCTCT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGCCTGCTGCCCAGGGATaGCCAGGTCTGTGGTCCTTT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGPAAQG*PGLWSF
Trigger: AAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGG...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGAGGGATGGAATTGGTTaGAGCCGCCACAGAACGGCC +
Preference number: 4 (lower is better)
Translates to: AQESTGHLQARQITGRSWRDGIG*SRHRTA
Trigger: GGCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCT...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAGGTTGTCCGCAATGGTaGTCTGTTCGTTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQGCPQW*SVRSLR
Trigger: CCGAAGAGAACGAACAGATCACCATTGCGGACAACC...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGCCCATCAGTGGATCTaGGAACACCAGTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGAHQWI*EHQWGA
Trigger: TGCTCCCCACTGGTGTTCTCAGATCCACTGATGGGC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCCATACATGGCGTCACTaGATATTCCATCAATCAAAT +
Preference number: 4 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSHTWRH*IFHQSN
Trigger: ATTTGATTGATGGAATATTCAGTGACGCCATGTATG...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGTTRRS*RGNSRP
Trigger: TGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGGCCAGGCGCGGCCTaGTGTGATCCTGGTGGATCA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKRPGAA*CDPGGS
Trigger: TGATCCACCAGGATCACACCAGGCCGCGCCTGGCCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACGCCTCTAGCTGGCTCTaGTTAAAACGCAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDASSWL*LKRREP
Trigger: AGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGC...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGACCTGGCCCTGGCCGCTaGAGCAGTAGTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGPGPGR*SSSGCP
Trigger: CGGACAACCACTACTGCTCCAGCGGCCAGGGCCAGG...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAAGGGTGCGAAGAGGCTaGGCCTGGCCGGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGRVRRG*AWPEKE
Trigger: CTCCTTCTCCGGCCAGGCCCAGCCTCTTCGCACCCT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCAGTGGGGAGCAGACTaGGGCCTGGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVQWGAD*GLAFPR
Trigger: TCTGGGAAAAGCCAGGCCCCAGTCTGCTCCCCACTG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTGTGGCTAGATCCCTGTaGGGCAGGACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: TRVNWSSAGKANHREVLVVARSL*GRTGHC
Trigger: ACAGTGCCCAGTCCTGCCCCACAGGGATCTAGCCAC...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTGTGGCTAGATCCCTGTaGGGCAGGACTGGGCACTGT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVVARSL*GRTGHC
Trigger: ACAGTGCCCAGTCCTGCCCCACAGGGATCTAGCCAC...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGGGGCCACTGAAGGGTaGCTAGATCCCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKGATEG*LDPCGA
Trigger: TGCCCCACAGGGATCTAGCCACCCTTCAGTGGCCCC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGGGGCCACTGAAGGGTaGCTAGATCCCTGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFGATEG*LDPCGA
Trigger: TGCCCCACAGGGATCTAGCCACCCTTCAGTGGCCCC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGCCCAGGAAGGCACTaGCATGTCAGACCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHSPGRH*HVRPGP
Trigger: GGGACCGGGTCTGACATGCCAGTGCCTTCCTGGGCT...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp GAGAAAGCAGTCTGGCCTTTGAGAAGGAAGCCTGGCTaGCCAGGTGCCATCCTCAATGTATCCGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EKAVWPLRRKPG*PGAILNVSGLF
Trigger: GAAGAGGCCGGATACATTGAGGATGGCACCTGGCAAGCCAGGCTTCCTTCTCAAAGGCCAGACTGCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTAWWSQ*RTKTIG
Trigger: ACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAATCCGGCTTTTATTCATaGGGTCTGCTCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQSGFYS*GLLLVL
Trigger: AAGCACGAGGAGCAGACCTCATGAATAAAAGCCGGA...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGTGTTGCTGTTGCAAGTaGTGGCTTGGGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGCCCCK*WLGASA
Trigger: AGCAGAGGCCCCAAGCCATCACTTGCAACAGCAACA...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGCACCCTGGCGTTTCTaGAGAGGCCTGTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGAPWRF*RGLFNG
Trigger: GCCATTAAACAGGCCTCTTCAGAAACGCCAGGGTGC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTCCCAGAGGTGCTTCTaGGGGTGCGAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSQRCF*GCEEAG
Trigger: CCCAGCCTCTTCGCACCCTCAGAAGCACCTCTGGGA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATCCCAGAGGTGCTTCTaGGGGTGCGAAGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGSQRCF*GCEEAG
Trigger: CCCAGCCTCTTCGCACCCTCAGAAGCACCTCTGGGA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGTTGCTGGAGGAAGCTaGGGCTGGGCCCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSVAGGS*GWAHQW
Trigger: CCACTGATGGGCCCAGCCTCAGCTTCCTCCAGCAAC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCCCCAAGGTGAGAAAGTaGCCAATGGCAACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAPKVRK*PMATLH
Trigger: GTGCAGGGTTGCCATTGGTCACTTTCTCACCTTGGG...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGTTRRS*RGNSRP
Trigger: TGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGT...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCAGGTACAGGGCCACCTaGACTGCCTGGAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFRYRAT*TAWSHC
Trigger: GCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCT...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTAGGAGCTACTGCTGTTaGCTCCAGGTACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVRSYCC*LQVQGH
Trigger: GTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCT...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGACCTGCCTCTAGTGTaGAGCAGGGCTGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGDLPLV*SRAGSF
Trigger: AAAACTCCCAGCCCTGCTGCACACTAGAGGCAGGTC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCGCATACATGTAGGGTaGAGGACAAGCCCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGRIHVG*RTSPGR
Trigger: CCTGCCTGGGCTTGTCCTCCACCCTACATGTATGCG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTACATCCCCGATGAATaGGTAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTYIPDE*VMHQKA
Trigger: GGCCTTCTGATGCATTACCCATTCATCGGGGATGTA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQPGRKQ*FKKVLH
Trigger: GTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACGCTCTGTGCCCATCATaGTTTCCTAAGGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDALCPS*FPKVLT
Trigger: AGTCAGCACCTTAGGAAACCATGATGGGCACAGAGC...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTAGCACAAGAGTCAACTaGTCATCTGCAGGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSSTRVN*SSAGKA
Trigger: TGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGCT...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp GCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTaGAAGGTCAGACAACCTGCTGTCTGGCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: ATVCICQAIAQW*KVRQPAVWQNQ
Trigger: CTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQAWWSQ*RTKTIG
Trigger: ACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGC...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVLLNPG*GRLQTR
Trigger: CCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACAGCCTTAAGAATCAGTaGGTGTACATCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYSLKNQ*VYIPDE
Trigger: TTCATCGGGGATGTACACTCACTGATTCTTAAGGCT...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACGCTTGGGGCCTCTGCTaGGGTCCTGGTAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHAWGLC*GPGRNY
Trigger: GTAATTCCTACCAGGACCTCAGCAGAGGCCCCAAGC...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTGTTGCTGTTGCAAGTaGTGGCTTGGGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVCCCCK*WLGASA
Trigger: AGCAGAGGCCCCAAGCCATCACTTGCAACAGCAACA...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGATGGCCCCTGACATTTaGACGCTCTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKMAPDI*TLWPWP
Trigger: AGGCCAAGGCCAGAGCGTTCAAATGTCAGGGGCCAT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGGCACCCTGGCGTTTCTaGAGAGGCCTGTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGAPWRF*RGLFNG
Trigger: GCCATTAAACAGGCCTCTTCAGAAACGCCAGGGTGC...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGCCCATCAGTGGATCTaGGAACACCAGTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKAHQWI*EHQWGA
Trigger: TGCTCCCCACTGGTGTTCTCAGATCCACTGATGGGC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CAAGAAGGGAAGGGGTTGTGTAGAAATCCTGCATCCTCTTGGCATGTGGAATGTTACGGGGTTCACAGCTaGGCACAGGCCCTGCAGTAC +
Preference number: 4 (lower is better)
Translates to: QEGKGLCRNPASSWHVECYGVHS*AQALQY
Trigger: GTACTGCAGGGCCTGTGCTCAGCTGTGAACCCCGTA...ACATTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAATCCAAAACTCAGGAATaGACTACTCAACTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQSKTQE*TTQLRP
Trigger: CGGCCTCAGTTGAGTAGTGCATTCCTGAGTTTTGGA...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GCGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AEPAASQLPINPLLPYCCLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGGAGCTACTGCTGTTaGCTCCAGGTACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHRSYCC*LQVQGH
Trigger: GTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCT...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCAGTGTCCATCACCTTTaGACAGTATTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTSVHHL*TVFAHG
Trigger: GCCATGTGCAAATACTGTGCAAAGGTGATGGACACT...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAGCCAGAGTCCTTGCTaGTGTCGTCATCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGSQSPC*CRHQDW
Trigger: CCAGTCCTGATGACGACAGCAGCAAGGACTCTGGCT...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCAGGGAGCTACTGTGTaGATCTGCCAGGCAATTGCC +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGQGATV*ICQAIA
Trigger: GGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAGCCTGGCTTGCCAGGTaGCATCCTCAATGTATCCGG +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGAWLAR*HPQCIR
Trigger: CCGGATACATTGAGGATGGCACCTGGCAAGCCAGGC...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCAGAAGGAAGCCTGGCTTaGCAGGTGCCATCCTCAATG +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAEGSLA*QVPSSM
Trigger: CATTGAGGATGGCACCTGGCAAGCCAGGCTTCCTTC...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCTTTTCATTTCCTCACTaGGCTGTGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATFSFPH*AVQTHW
Trigger: CCAGTGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTTACATCCCCGATGAATaGGTAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSYIPDE*VMHQKA
Trigger: GGCCTTCTGATGCATTACCCATTCATCGGGGATGTA...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAATACATCCCCGATGAATaGGTAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQYIPDE*VMHQKA
Trigger: GGCCTTCTGATGCATTACCCATTCATCGGGGATGTA...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCGGAGAAGGAGCCCCTaGCACTGCTCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFRRRSP*HCSHHH
Trigger: ATGATGATGGGAGCAGTGCCAGGGGCTCCTTCTCCG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGCAGGACTGGGCACTGTaGTCAGATGTCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKQDWAL*SDVQGT
Trigger: AGTCCCCTGGACATCTGACCACAGTGCCCAGTCCTG...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTAGAGCAAGAGTCGGGTaGGGATTAGGTAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVRARVG*GLGKGP
Trigger: TGGGCCCTTACCTAATCCCCACCCGACTCTTGCTCT...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGTCTGTCCCAGAGCCCTaGTGGGAACAGCTCTACACC +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSVPEP*WEQLYT
Trigger: GGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGA...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACAGTGTGCAGCAGGGCTaGGAGTTTTCAGTGACTATT +
Preference number: 4 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDSVQQG*EFSVTI
Trigger: AATAGTCACTGAAAACTCCCAGCCCTGCTGCACACT...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCACAGAAGCACAGGATaGAGAGGACCGAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVHRSTG*RGPRGP
Trigger: AGGTCCTCTCGGTCCTCTCCATCCTGTGCTTCTGTG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCAAGGAGGGATGGAATTaGTTGGAGCCGCCACAGAAC +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAKEGWN*LEPPQN
Trigger: GTTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCATACTGATATCACTGTaGCGCAGAAGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: AEPAASQLPINPLLPYCCILISL*RRRAPQ
Trigger: CTGGGGAGCCCTTCTGCGCCACAGTGATATCAGTAT...GCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412981.5
CDS-3UTR TCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGACTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGLLNPG*GRLQTR
Trigger: CCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAG...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCAGCCTTAAGAATCAGTaGGTGTACATCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATSLKNQ*VYIPDE
Trigger: TTCATCGGGGATGTACACTCACTGATTCTTAAGGCT...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAGCTTGGGGCCTCTGCTaGGGTCCTGGTAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGAWGLC*GPGRNY
Trigger: GTAATTCCTACCAGGACCTCAGCAGAGGCCCCAAGC...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGATGTTGCTGTTGCAAGTaGTGGCTTGGGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGCCCCK*WLGASA
Trigger: AGCAGAGGCCCCAAGCCATCACTTGCAACAGCAACA...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGGGTTGTCCGCAATGGTaGTCTGTTCGTTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGGCPQW*SVRSLR
Trigger: CCGAAGAGAACGAACAGATCACCATTGCGGACAACC...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAATGGCCCCTGACATTTaGACGCTCTGGCCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGMAPDI*TLWPWP
Trigger: AGGCCAAGGCCAGAGCGTTCAAATGTCAGGGGCCAT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACTTTGGAAATCAGGATaGAGTCATCGGAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQLWKSG*SHRNSL
Trigger: GAGGGAATTCCGATGACTTCATCCTGATTTCCAAAG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCGCCCATCAGTGGATCTaGGAACACCAGTGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCAHQWI*EHQWGA
Trigger: TGCTCCCCACTGGTGTTCTCAGATCCACTGATGGGC...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACATTGATGGCCAAAGTTaGTATGGCCTAAGGATTGGA +
Preference number: 4 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYIDGQS*YGLRIG
Trigger: TCCAATCCTTAGGCCATATCAACTTTGGCCATCAAT...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTTTCATTTGTTACCATaGAGGCCTCCACTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGFHLLP*RPPLPG
Trigger: GCCGGGCAGTGGAGGCCTTCATGGTAACAAATGAAA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCCTTAGGAGGCCAGCATaGCTGCCACAGAGTTTGATA +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLALRRPA*LPQSLI
Trigger: TATCAAACTCTGTGGCAGTCATGCTGGCCTCCTAAG...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RNLLLLSCPLIPFCLIVAIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...GGCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCCAGGCTGAGGCCGTCTaGAAACAAGGCATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCQAEAV*KQGIPD
Trigger: GTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTG...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCCAGGGCCACCTGCACTaGCTGGAGCCATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIQGHLH*LEPLLG
Trigger: CCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTG...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCCCTTTGCACAGTATTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SQGATVCICQAIAQWLKVPLHSI*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAATACTGTGCAAAGG...GACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACCTTTGCACAGTATTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQPLHSI*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAATACTGTGCAAAGG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAAGGAGCCCCTGGCACTaGTCCCATCATCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGRSPWH*SHHHLW
Trigger: CCAAAGATGATGATGGGAGCAGTGCCAGGGGCTCCT...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGGAGCCCCTGGCACTaGTCCCATCATCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKRSPWH*SHHHLW
Trigger: CCAAAGATGATGATGGGAGCAGTGCCAGGGGCTCCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCAAAGGGCTGGACCAATaGAAAATGCATGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAKGLDQ*KMHAGK
Trigger: CTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGAAAGGGCTGGACCAATaGAAAATGCATGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGKGLDQ*KMHAGK
Trigger: CTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTCATCTGCCAGGCAATTaGCCAGTGGTTGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRVNWSSAGKANHREVLVHLPGN*PVVEGQ
Trigger: CTGACCTTCAACCACTGGGCAATTGCCTGGCAGATG...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTAAGGTCGCAGTCAGCTaGAAGCAGTTCCAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVKVAVS*KQFQCA
Trigger: AGCACACTGGAACTGCTTGCAGCTGACTGCGACCTT...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR CCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGTCAGGGGAGCACCTTTaGCATTGGTCCGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGSGEHL*HWSGFY
Trigger: ATAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGA...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTCAGGGGAGCACCTTTaGCATTGGTCCGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLASGEHL*HWSGFY
Trigger: ATAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGA...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGAWSHC*GNQLSS
Trigger: GGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCCACAGTATTTGCACATaGCATCCAGGTCATTCAACT +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTHSICT*HPGHST
Trigger: AGTTGAATGACCTGGATGCCATGTGCAAATACTGTG...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGGCCTCTAGCTGGCTCTaGTTAAAACGCAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGASSWL*LKRREP
Trigger: AGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGC...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCGAAGAGGCTGGGCCTaGCCGGAGAAGGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQRRGWA*PEKEPL
Trigger: CAGGGGCTCCTTCTCCGGCCAGGCCCAGCCTCTTCG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGAGCAGACTGGGGCCTaGCTTTTCCCAGAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSEQTGA*LFPEVL
Trigger: AAGCACCTCTGGGAAAAGCCAGGCCCCAGTCTGCTC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGACAGGACTGGGCACTGTaGTCAGATGTCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGQDWAL*SDVQGT
Trigger: AGTCCCCTGGACATCTGACCACAGTGCCCAGTCCTG...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAAGCGGAGAGCCTTATTaGCATGGTGGGTGCCTAGTG +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGSGEPY*HGGCLV
Trigger: CACTAGGCACCCACCATGCCAATAAGGCTCTCCGCT...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGCAGGAAAGGAGGGATaGAATTGGTTGGAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKAGKEG*NWLEPP
Trigger: TGGCGGCTCCAACCAATTCCATCCCTCCTTTCCTGC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGAGGCAGGAGAAGTGTTTaGAACCATGAGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRGRRSV*NHEGEV
Trigger: CACCTCTCCCTCATGGTTTCAAACACTTCTCCTGCC...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCAGTTTCCATAAGTTGTaGGAACACTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATSFHKL*EHCIGI
Trigger: GATGCCTATGCAGTGTTCTCACAACTTATGGAAACT...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSLLNPG*GRLQTR
Trigger: CCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTCACAGGCATGCTTTCTaGTTTCATCAGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TRVNWSSAGKANHREVLVHRHAF*FHQPLL
Trigger: CAGCAGAGGCTGATGAAATCAGAAAGCATGCCTGTG...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTGGAGAGCCAGTaGATTCTCTTCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKKVESQ*ILFLQA
Trigger: TGCCTGGAGGAAGAGAATTCACTGGCTCTCCACCTT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGGTTGTCCGCAATGGTaGTCTGTTCGTTCTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKGCPQW*SVRSLR
Trigger: CCGAAGAGAACGAACAGATCACCATTGCGGACAACC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGCTGTTTAATGGCCCCTaGCATTTGAACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKLFNGP*HLNALA
Trigger: GGCCAGAGCGTTCAAATGTCAGGGGCCATTAAACAG...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACCATGTCTGATGCTTTaGGGGATAGAAGATACGAAA +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQPCLML*GIEDTK
Trigger: TTTCGTATCTTCTATCCCTCAAAGCATCAGACATGG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAATTTGTTCAGCATCTCTaGCAAAGTAGAGGAGGCATT +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQFVQHL*QSRGGI
Trigger: AATGCCTCCTCTACTTTGTCAGAGATGCTGAACAAA...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCATGGACCAATGCAAAATaGATGCCGGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAWTNAK*MPGRKQ
Trigger: CTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCA...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCCTCTCTCCCTCAGTCTaGAGGGCGCTCGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: SCERGLLIIKSCWPTTFLLSPSV*RALAEA
Trigger: CGCTTCCGCGAGCGCCCTGCAGACTGAGGGAGAGAG...GAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR GCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCTCGCCTTTGTTCAATTaGACAGGCATGCTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATSPLFN*TGMLSD
Trigger: ATCAGAAAGCATGCCTGTGCAATTGAACAAAGGCGA...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAATAATCCTGGCTACCTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGIILAT*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAGGTAGCCAGGATTAT...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACATACATTGTGGGAACTaGACAGCGTCACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDIHCGN*TASPKV
Trigger: TACTTTTGGTGACGCTGTCCAGTTCCCACAATGTAT...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAATACATTGTGGGAACTaGACAGCGTCACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQIHCGN*TASPKV
Trigger: TACTTTTGGTGACGCTGTCCAGTTCCCACAATGTAT...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGCTGTGCAGACTCACTaGCATGTAGAAAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGAVQTH*HVEKLG
Trigger: ACCAAGCTTTTCTACATGCCAGTGAGTCTGCACAGC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGTCTTCGGCCTCTAGCTaGCTCTGGTTAAAACGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSSASS*LWLKRR
Trigger: CCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGA...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCCTGGCCCTGGCCGCTaGAGCAGTAGTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQPGPGR*SSSGCP
Trigger: CGGACAACCACTACTGCTCCAGCGGCCAGGGCCAGG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGCCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGPGRKQ*FKKVLH
Trigger: GTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGG...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGGGGTTTCAAAGGGCTaGACCAATGCAAAATGCATG +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAGVSKG*TNAKCM
Trigger: CATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAGAGCAAGAGTCGGGTaGGGATTAGGTAAGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSRARVG*GLGKGP
Trigger: TGGGCCCTTACCTAATCCCCACCCGACTCTTGCTCT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTTTTAGCTCTGCGATATaGCTTCCCAATGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSFSSAI*LPNAGI
Trigger: TATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAA...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTAATCCTGCATCCTCTTaGCATGTGGAATGTTCTCTA +
Preference number: 4 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSNPASS*HVECSL
Trigger: TAGAGAACATTCCACATGCCAAGAGGATGCAGGATT...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCATCACAGGGAGGTCCTaGTTTATTTTTAGAGTCACA +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTITGRS*FIFRVT
Trigger: TGTGACTCTAAAAATAAACCAGGACCTCCCTGTGAT...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp GAATTTGAGGCTGGTACTACCCATGACCCACTGTCCTaGTATGTCTCTCTCCTCCAAGGAGGTGGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: EFEAGTTHDPLS*YVSLLQGGGEL
Trigger: AAGCTCACCACCTCCTTGGAGGAGAGAGACATACAAGGACAGTGGGTCATGGGTAGTACCAGCCTCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCATCATGCTCAAAAGTTaGAAACCAAGGTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: SQGATVCICQAIAQWLKVIMLKS*KPRFSS
Trigger: ACTGCTGAACCTTGGTTTTCAACTTTTGAGCATGAT...GACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCAGTGTACATCCCCGATaGATGGGTAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLASVHPR*MGNASE
Trigger: TTCTGATGCATTACCCATTCATCGGGGATGTACACT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCTGTTGCTGTTGCAAGTaGTGGCTTGGGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISCCCCK*WLGASA
Trigger: AGCAGAGGCCCCAAGCCATCACTTGCAACAGCAACA...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCCTCAACGCTTGGAGATaGACTGATGTTTTTAGAACT +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATLNAWR*TDVFRT
Trigger: AGTTCTAAAAACATCAGTTCATCTCCAAGCGTTGAG...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAAGGTGGAGAGCCAGTaGATTCTCTTCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSKVESQ*ILFLQA
Trigger: TGCCTGGAGGAAGAGAATTCACTGGCTCTCCACCTT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTTTAAGGAGAGATATTaGTGGCCAAAGTTGATATGG +
Preference number: 4 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTFKERY*WPKLIW
Trigger: CCATATCAACTTTGGCCATCAATATCTCTCCTTAAA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCAATTGCCCAGTGGTTaGAGGTCAGACAACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSQLPSG*RSDNLL
Trigger: CAGCAGGTTGTCTGACCTTCAACCACTGGGCAATTG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CAAGAAGGGAAGGGGTTGTGTAGAAATCCTGCATCCTCTTGGCATGTGGAATGTCTTACTCAGAGGTGCTaGGAGGAACACTCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: QEGKGLCRNPASSWHVECLTQRC*EEHSEP
Trigger: TGGCTCTGAGTGTTCCTCTCAGCACCTCTGAGTAAG...ACATTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGGCTGGGAGTTTTCAGTaGCTATTAAACACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGAGSFQ*LLNTQP
Trigger: TGGCTGGGTGTTTAATAGTCACTGAAAACTCCCAGC...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCCACAGATGCAGAAGCTaGGACTCAAGGTCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCHRCRS*DSRSQS
Trigger: TGACTGCGACCTTGAGTCTCAGCTTCTGCATCTGTG...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR GCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AQESTGHLQARQITGRSWSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGAATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCAAGTAATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PAASQLPINPLLPYCCQVIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...TACTTGGCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGCAGGGCCACCTGCACTaGCTGGAGCCATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKQGHLH*LEPLLG
Trigger: CCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTG...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCAGGTACAGGGCCACCTaGACTGCCTGGAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIRYRAT*TAWSHC
Trigger: GCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCT...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAGATTTCATCAGCCTCTaGTGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGDFISL*CCCCCC
Trigger: GCAACAGCAACAGCAGCAGCAGAGGCTGATGAAATC...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFPMQNA*REGSSG
Trigger: ACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGAGTCTCTAATCTGTaGTCAGCCCAGGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKRVSNL*SAQEGT
Trigger: AGTGCCTTCCTGGGCTGAGCACAGATTAGAGACTCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACCTGTATCGTCCTCATTaGCCAAATAAAAAGTCAGAA +
Preference number: 4 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYLYRPH*PNKKSE
Trigger: TTCTGACTTTTTATTTGGCCAATGAGGACGATACAG...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTTTTCATTTCCTCACTaGGCTGTGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGFSFPH*AVQTHW
Trigger: CCAGTGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTTTTCATTTCCTCACTaGGCTGTGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVFSFPH*AVQTHW
Trigger: CCAGTGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCTCTTGGATTTCTCTTTaGATCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: AIFPSQPLGQLGLQARATSWISL*ISKEQS
Trigger: GCTCTGTTCCTTAGAGATCCAAAGAGAAATCCAAGA...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHAWSHC*GNQLSS
Trigger: GGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGC...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFAWSHC*GNQLSS
Trigger: GGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTGGGGTTTCAAAGGGCTaGACCAATGCAAAATGCATG +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVGVSKG*TNAKCM
Trigger: CATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCC...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCAGAGTCACCATTTTCTTaGAGGGCAGGTGGGAAATCA +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAESPFS*RAGGKS
Trigger: TGATTTCCCACCTGCCCTCCAAGAAAATGGTGACTC...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGACAGGCAATTGCCCAGTaGTTGAAGGTCAGACAACCT +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGQAIAQ*LKVRQP
Trigger: AGGTTGTCTGACCTTCAACCACTGGGCAATTGCCTG...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGAGCCTTATTGGCATaGTGGGTGCCTAGTGACTCT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKRALLA*WVPSDS
Trigger: AGAGTCACTAGGCACCCACCATGCCAATAAGGCTCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAAACGGCCACTCTATGTaGGGACCTAAGTCCTCCGTA +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGNGHSM*GPKSSV
Trigger: TACGGAGGACTTAGGTCCCCACATAGAGTGGCCGTT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTGTTGATAAAACCCAATaGCGCATAGCTGAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TRVNWSSAGKANHREVLVVDKTQ*RIAEQV
Trigger: GACTTGCTCAGCTATGCGTCATTGGGTTTTATCAAC...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGAGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGAWWSQ*RTKTIG
Trigger: ACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGC...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCAGTTTCCATAAGTTGTaGGAACACTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLASFHKL*EHCIGI
Trigger: GATGCCTATGCAGTGTTCTCACAACTTATGGAAACT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTCCGGCTTTTATTCATaGGGTCTGCTCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSGFYS*GLLLVL
Trigger: AAGCACGAGGAGCAGACCTCATGAATAAAAGCCGGA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATGCTTGGGGCCTCTGCTaGGGTCCTGGTAGGAATTAC +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHAWGLC*GPGRNY
Trigger: GTAATTCCTACCAGGACCTCAGCAGAGGCCCCAAGC...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCACAGGCATGCTTTCTaGTTTCATCAGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSHRHAF*FHQPLL
Trigger: CAGCAGAGGCTGATGAAATCAGAAAGCATGCCTGTG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGACACAGGCATGCTTTCTaGTTTCATCAGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGHRHAF*FHQPLL
Trigger: CAGCAGAGGCTGATGAAATCAGAAAGCATGCCTGTG...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCAAGGTGGAGAGCCAGTaGATTCTCTTCCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISKVESQ*ILFLQA
Trigger: TGCCTGGAGGAAGAGAATTCACTGGCTCTCCACCTT...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTCTTTGGAAATCAGGATaGAGTCATCGGAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: TRVNWSSAGKANHREVLVLWKSG*SHRNSL
Trigger: GAGGGAATTCCGATGACTTCATCCTGATTTCCAAAG...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCCTTCTAAGTATAACTaGTGGAGGTGCCACACATTC +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVPSKYN*WRCHTF
Trigger: GAATGTGTGGCACCTCCATCAGTTATACTTAGAAGG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAGGAATAAAGTAGGCTaGGACAGATTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGRNKVG*DRFPQR
Trigger: CCTCTGTGGAAATCTGTCTCAGCCTACTTTATTCCT...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp CAAGAAGGGAAGGGGTTGTGTAGAAATCCTGCATCCTCTTGGCATGTGGAATGTGCCAATGAGGGATTCTaGCTTTGGGTGGGAATGAAC +
Preference number: 4 (lower is better)
Translates to: QEGKGLCRNPASSWHVECANEGF*LWVGMN
Trigger: GTTCATTCCCACCCAAAGTCAGAATCCCTCATTGGC...ACATTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKTGTET*ASLPVT
Trigger: AGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR GCA 90 bp GCGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCTCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: AEPAASQLPINPLLPYCCSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...GCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTGGACAAGGGGTCAATaGCTACTTCTTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVWTRGQ*LLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTCCA...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISITTRRS*RGNSRP
Trigger: TGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGT...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCACAGGCTGAGGCCGTCTaGAAACAAGGCATCCCAGAC +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISQAEAV*KQGIPD
Trigger: GTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTG...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGAGGTACAGGGCCACCTaGACTGCCTGGAGCCATTGC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQRYRAT*TAWSHC
Trigger: GCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAAGGAGCTACTGCTGTTaGCTCCAGGTACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISRSYCC*LQVQGH
Trigger: GTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCT...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCCAATGCAAAATGCATaGCGGGAAGGAAGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSPMQNA*REGSSG
Trigger: ACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGGACCAATGCAAAATaGATGCCGGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGWTNAK*MPGRKQ
Trigger: CTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGAAGGTCAGACAACCTaGTGTCTGGCAAAACCAGTT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFEGQTT*CLAKPV
Trigger: AACTGGTTTTGCCAGACAGCAGGTTGTCTGACCTTC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGGTGCCTAGTGACTCTTaGAGGGCGAGTGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQVPSDS*RASDPQ
Trigger: CTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCAC...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp ATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTACTCTCTCCCTCAGTCTaGAGGGCGCTCGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: IKSCWPTTFLGLVICISLLSPSV*RALAEA
Trigger: CGCTTCCGCGAGCGCCCTGCAGACTGAGGGAGAGAG...TAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGCTGTGCAGACTCACTaGCATGTAGAAAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFAVQTH*HVEKLG
Trigger: ACCAAGCTTTTCTACATGCCAGTGAGTCTGCACAGC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCAGTGGGGAGCAGACTaGGGCCTGGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQQWGAD*GLAFPR
Trigger: TCTGGGAAAAGCCAGGCCCCAGTCTGCTCCCCACTG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCCGGGAAGGAAGCAGTaGTTTAAGAAGGTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSPGRKQ*FKKVLH
Trigger: GTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCATGGCCAAAGTTGATATaGCCTAAGGATTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAWPKLI*PKDWRC
Trigger: GCATCTCCAATCCTTAGGCCATATCAACTTTGGCCA...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCCATCTCAGCCTCTTaGGCAGCTGGGACTACAGGC +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISISISAS*AAGTTG
Trigger: GCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
3UTR CAA 72 bp GCAGTACCTACACTTGACTTCCAAGAAGGGAAGGGGTaGTGTAGAAATCCTGCATCCTCTTGGCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: AVPTLDFQEGKG*CRNPASSWHVE
Trigger: TTCCACATGCCAAGAGGATGCAGGATTTCTACACAACCCCTTCCCTTCTTGGAAGTCAAGTGTAGGTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
3UTR CAA 72 bp GCGGCTTTTACAAAGTGTTGTCATAGGGATATGTGCTaGGCAGCAGCTTACTCAGAGGTGCTGAGAGGAACA +
Preference number: 4 (lower is better)
Translates to: AAFTKCCHRDMC*AAAYSEVLRGT
Trigger: TGTTCCTCTCAGCACCTCTGAGTAAGCTGCTGCCAAGCACATATCCCTATGACAACACTTTGTAAAAGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: AEPAASQLPINPLLPYCCVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...GCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR TCA 90 bp CGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: RNLLLLSCPLIPFCLIVAVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...GGCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR TCA 90 bp GCACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: AQESTGHLQARQITGRSWVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...CCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGACTCCCTTCATCCTGTaGAAGAGGATTATTGATCAT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGTPFIL*KRIIDH
Trigger: ATGATCAATAATCCTCTTTCACAGGATGAAGGGAGT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCAAGTTTCCATAAGTTGTaGGAACACTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKASFHKL*EHCIGI
Trigger: GATGCCTATGCAGTGTTCTCACAACTTATGGAAACT...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCACTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISLLNPG*GRLQTR
Trigger: CCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAG...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGCCTTAAGAATCAGTaGGTGTACATCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSLKNQ*VYIPDE
Trigger: TTCATCGGGGATGTACACTCACTGATTCTTAAGGCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCAGCCTTAAGAATCAGTaGGTGTACATCCCCGATGAA +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFSLKNQ*VYIPDE
Trigger: TTCATCGGGGATGTACACTCACTGATTCTTAAGGCT...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGCTCAACGCTTGGAGATaGACTGATGTTTTTAGAACT +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGLNAWR*TDVFRT
Trigger: AGTTCTAAAAACATCAGTTCATCTCCAAGCGTTGAG...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHSFNCP*RKEIWA
Trigger: AGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGA...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFSFNCP*RKEIWA
Trigger: AGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGA...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGGGGGACTCACAATGGTaGAGCCAGAGTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKGDSQW*SQSPCC
Trigger: GCAGCAAGGACTCTGGCTTCACCATTGTGAGTCCCC...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCCTTCTAAGTATAACTaGTGGAGGTGCCACACATTC +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFPSKYN*WRCHTF
Trigger: GAATGTGTGGCACCTCCATCAGTTATACTTAGAAGG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCCATGTCTGATGCTTTaGGGGATAGAAGATACGAAA +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVPCLML*GIEDTK
Trigger: TTTCGTATCTTCTATCCCTCAAAGCATCAGACATGG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGGAATAAAGTAGGCTaGGACAGATTTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKRNKVG*DRFPQR
Trigger: CCTCTGTGGAAATCTGTCTCAGCCTACTTTATTCCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCCTTTATTCCTCAGTTaGCAGGTATATACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVPLFLS*QVYTAL
Trigger: CAGAGCTGTATATACCTGTCAACTGAGGAATAAAGG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACGACTTTGGGTGGGAATaGACTTGGGTTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHDFGWE*TWVFPF
Trigger: AAAGGGAAAAACCCAAGTTCATTCCCACCCAAAGTC...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTCAATTGCACAGGCATaGTTTCTGATTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGSIAQA*FLISSA
Trigger: GGCTGATGAAATCAGAAAGCATGCCTGTGCAATTGA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAGCCCTTTGTTCAATTaGACAGGCATGCTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGSPLFN*TGMLSD
Trigger: ATCAGAAAGCATGCCTGTGCAATTGAACAAAGGGCT...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR GCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCCTTTGCACAGTATTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFPLHSI*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAATACTGTGCAAAGG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGTGTCCATCACCTTTaGACAGTATTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSVHHL*TVFAHG
Trigger: GCCATGTGCAAATACTGTGCAAAGGTGATGGACACT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAATTCCCTCTATCAGTaGACCCTGGCGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCNSLYQ*TLAFLK
Trigger: CTTCAGAAACGCCAGGGTGCACTGATAGAGGGAATT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGATCATGTGATGCTCTGTaGCCATCATGGTTTCCTAAG +
Preference number: 4 (lower is better)
Translates to: STVADLRVSHHFLGGQVGSCDAL*PSWFPK
Trigger: CTTAGGAAACCATGATGGGCACAGAGCATCACATGA...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAGTCAACTGGTCATCTaGAGGCAAGGCAAATCACAG +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSQLVI*RQGKSQ
Trigger: CTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTCGCCTTTGTTCAATTaGACAGGCATGCTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVSPLFN*TGMLSD
Trigger: ATCAGAAAGCATGCCTGTGCAATTGAACAAAGGCGA...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTTTTCATTTCCTCACTaGGCTGTGCAGACTCACTGG +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCFSFPH*AVQTHW
Trigger: CCAGTGAGTCTGCACAGCCCAGTGAGGAAATGAAAA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGTCTTGGATTTCTCTTTaGATCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGSWISL*ISKEQS
Trigger: GCTCTGTTCCTTAGAGATCCAAAGAGAAATCCAAGA...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCCCTGGCCCTGGCCGCTaGAGCAGTAGTGGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYIPGPGR*SSSGCP
Trigger: CGGACAACCACTACTGCTCCAGCGGCCAGGGCCAGG...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCGGAGAAGGAGCCCCTaGCACTGCTCCCATCATCAT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKRRRSP*HCSHHH
Trigger: ATGATGATGGGAGCAGTGCCAGGGGCTCCTTCTCCG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGCAGTGGGGAGCAGACTaGGGCCTGGCTTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKQWGAD*GLAFPR
Trigger: TCTGGGAAAAGCCAGGCCCCAGTCTGCTCCCCACTG...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCAGGACTGGGCACTGTaGTCAGATGTCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKQDWAL*SDVQGT
Trigger: AGTCCCCTGGACATCTGACCACAGTGCCCAGTCCTG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGCCTCTGTGCTTTGTaGCCATATATGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSLCAL*PYMLLS
Trigger: AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCATAGGGATATGTGCTTaGCAGCAGCTTACTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCIGICA*QQLTQR
Trigger: CCTCTGAGTAAGCTGCTGCCAAGCACATATCCCTAT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGGGATGGCCAGGTCTGTaGTCCTTTCCAGTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKGWPGL*SFPVCP
Trigger: GGGACAGACTGGAAAGGACCACAGACCTGGCCATCC...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCCAAATCTTCCCACCTTaGCTTTCCACAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISQIFPP*LSTVLG
Trigger: TCCCAGCACTGTGGAAAGCCAAGGTGGGAAGATTTG...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGCAGGAAACGTTCTTTTaGCATCTTGTTCAATCATTG +
Preference number: 4 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGQETFF*HLVQSL
Trigger: CAATGATTGAACAAGATGTCAAAAGAACGTTTCCTG...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCTCAACGCTTGGAGATaGACTGATGTTTTTAGAACT +
Preference number: 4 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVLNAWR*TDVFRT
Trigger: AGTTCTAAAAACATCAGTTCATCTCCAAGCGTTGAG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSFNCP*RKEIWA
Trigger: AGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGACTTTGGAAATCAGGATaGAGTCATCGGAATTCCCTC +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGLWKSG*SHRNSL
Trigger: GAGGGAATTCCGATGACTTCATCCTGATTTCCAAAG...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCACCGAGATCGAGCCACTaGACCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSPRSSH*TTALQP
Trigger: AGGCTGGAGTGCAGTGGTGCAGTGGCTCGATCTCGG...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCGGTCCAGTGAACAAGTaGAAGCAAAACGAAACTGCA +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCGPVNK*KQNETA
Trigger: TGCAGTTTCGTTTTGCTTGCACTTGTTCACTGGACC...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp CCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCCAAGTATCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PAASQLPINPLLPYCCQVSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...TACTTGGCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCACTGCCTGGAGCCATTaGTGGGGAAATCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISTAWSH*WGNQLS
Trigger: AGAAAGTTGATTTCCCCAGCAATGGCTCCAGGCAGT...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGCCCTTTGTTCAATTaGACAGGCATGCTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSPLFN*TGMLSD
Trigger: ATCAGAAAGCATGCCTGTGCAATTGAACAAAGGGCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAGTGTCCATCACCTTTaGACAGTATTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSSVHHL*TVFAHG
Trigger: GCCATGTGCAAATACTGTGCAAAGGTGATGGACACT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGAGGAGCCCCTGGCACTaGTCCCATCATCATCTTTGG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQRSPWH*SHHHLW
Trigger: CCAAAGATGATGATGGGAGCAGTGCCAGGGGCTCCT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGAGCCAGAGTCCTTGCTaGTGTCGTCATCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQSQSPC*CRHQDW
Trigger: CCAGTCCTGATGACGACAGCAGCAAGGACTCTGGCT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACCTTTGTGGCCATATATaGTTCTCTCTAAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHLCGHI*FSLRGF
Trigger: GAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGCTTTGTGGCCATATATaGTTCTCTCTAAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKLCGHI*FSLRGF
Trigger: GAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCATAAGTCACTGGTCTTaGATTTCTCTTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAISHWS*ISLWIS
Trigger: AGAGATCCAAAGAGAAATCCAAGACCAGTGACTTAT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGAATTGATAAGTCACTaGTCTTGGATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAELISH*SWISLW
Trigger: CCAAAGAGAAATCCAAGACCAGTGACTTATCAATTC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGTCTTCGGCCTCTAGCTaGCTCTGGTTAAAACGCAGG +
Preference number: 4 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQSSASS*LWLKRR
Trigger: CCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGA...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAAGCCTCTGTGCTTTGTaGCCATATATGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGSLCAL*PYMLLS
Trigger: AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAGATGGAGGCTACAATaGGCTATGATTGTGCCACTA +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCRWRLQ*AMIVPL
Trigger: TAGTGGCACAATCATAGCCCATTGTAGCCTCCATCT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429383.8
CDS-3UTR TCA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGACTCCCTTCATCCTGTaGAAGAGGATTATTGATCAT +
Preference number: 4 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKTPFIL*KRIIDH
Trigger: ATGATCAATAATCCTCTTTCACAGGATGAAGGGAGT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAGTTTCCATAAGTTGTaGGAACACTGCATAGGCATC +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSFHKL*EHCIGI
Trigger: GATGCCTATGCAGTGTTCTCACAACTTATGGAAACT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATTCCGGCTTTTATTCATaGGGTCTGCTCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHSGFYS*GLLLVL
Trigger: AAGCACGAGGAGCAGACCTCATGAATAAAAGCCGGA...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCCACAGGCATGCTTTCTaGTTTCATCAGCCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIHRHAF*FHQPLL
Trigger: CAGCAGAGGCTGATGAAATCAGAAAGCATGCCTGTG...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCTGTTTAATGGCCCCTaGCATTTGAACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQLFNGP*HLNALA
Trigger: GGCCAGAGCGTTCAAATGTCAGGGGCCATTAAACAG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGGCACCCTGGCGTTTCTaGAGAGGCCTGTTTAATGGC +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKAPWRF*RGLFNG
Trigger: GCCATTAAACAGGCCTCTTCAGAAACGCCAGGGTGC...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCCTGGGAGGCGGAGATTaGGGTGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYILGGGD*GELRSH
Trigger: GTGCGATCTCAGCTCACCGCAATCTCCGCCTCCCAG...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAATAGCTTCCAGCAAATaGTGCGGAACCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISIASSK*CGTCCF
Trigger: GAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGCTAT...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp TGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGTTTATTCATGAGGTCTaGTCCTCGTGCTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: CFSLRGFKGLDQCKMHAGFIHEV*SSCFVI
Trigger: TATTACAAAGCACGAGGAGCAGACCTCATGAATAAA...CCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATGATTTCATCAGCCTCTaGTGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHDFISL*CCCCCC
Trigger: GCAACAGCAACAGCAGCAGCAGAGGCTGATGAAATC...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCTTTGTGGCCATATATaGTTCTCTCTAAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSLCGHI*FSLRGF
Trigger: GAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAAACCTAAGCCTCTGTaGTTTGTGGCCATATATGCT +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSKPKPL*FVAIYA
Trigger: AGCATATATGGCCACAAAGCACAGAGGCTTAGGTTT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAAAACCTAAGCCTCTGTaGTTTGTGGCCATATATGCT +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGKPKPL*FVAIYA
Trigger: AGCATATATGGCCACAAAGCACAGAGGCTTAGGTTT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGACCAATGGCAACCCTaGACAGTTGCAAGGTCACTC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQDQWQP*TVARSL
Trigger: GAGTGACCTTGCAACTGTGCAGGGTTGCCATTGGTC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCACTTGGCTTTCCACAGTaGTGGGATTACAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISLGFPQ*WDYSCE
Trigger: CTCACAGCTGTAATCCCAGCACTGTGGAAAGCCAAG...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGTAATTCCAGCACCTTaGGAGGCCGAGATGGACACA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQVIPAP*EAEMDT
Trigger: TGTGTCCATCTCGGCCTCCCAAGGTGCTGGAATTAC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAATACATTGTGGGAACTaGACAGCGTCACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGIHCGN*TASPKV
Trigger: TACTTTTGGTGACGCTGTCCAGTTCCCACAATGTAT...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCATCAGGGGAGCACCTTTaGCATTGGTCCGGCTTTTAT +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISSGEHL*HWSGFY
Trigger: ATAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGA...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIAWSHC*GNQLSS
Trigger: GGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGC...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCCACAGTATTTGCACATaGCATCCAGGTCATTCAACT +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCHSICT*HPGHST
Trigger: AGTTGAATGACCTGGATGCCATGTGCAAATACTGTG...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTCTTCGGCCTCTAGCTaGCTCTGGTTAAAACGCAGG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQSSASS*LWLKRR
Trigger: CCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGGCCTTATTGGCATGGTaGGTGCCTAGTGACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKALLAW*VPSDSC
Trigger: GCAAGAGTCACTAGGCACCCACCATGCCAATAAGGC...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTTTGAGAAGGAAGCCTaGCTTGCCAGGTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQFEKEA*LARCHP
Trigger: AGGATGGCACCTGGCAAGCCAGGCTTCCTTCTCAAA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGT +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHAWWSQ*RTKTIG
Trigger: ACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGC...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTATCATGCTCAAAAGTTaGAAACCAAGGTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSIMLKS*KPRFSS
Trigger: ACTGCTGAACCTTGGTTTTCAACTTTTGAGCATGAT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGTCCGGCTTTTATTCATaGGGTCTGCTCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKSGFYS*GLLLVL
Trigger: AAGCACGAGGAGCAGACCTCATGAATAAAAGCCGGA...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGCTGTTTAATGGCCCCTaGCATTTGAACGCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKLFNGP*HLNALA
Trigger: GGCCAGAGCGTTCAAATGTCAGGGGCCATTAAACAG...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCGTTGTGTACTGTTTCTaGACGCATGGCTGTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISVVYCF*THGCLF
Trigger: AAAAAGACAGCCATGCGTTCAGAAACAGTACACAAC...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHTGTET*ASLPVT
Trigger: AGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGT...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCACAAGCAAAACGAAACTaGAAATTTCAGTATCTCACT +
Preference number: 4 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAQAKRN*KFQYLT
Trigger: AGTGAGATACTGAAATTTGCAGTTTCGTTTTGCTTG...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCAGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGATTTCATCAGCCTCTaGTGCTGCTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQDFISL*CCCCCC
Trigger: GCAACAGCAACAGCAGCAGCAGAGGCTGATGAAATC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCTCAATTGCACAGGCATaGTTTCTGATTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISSIAQA*FLISSA
Trigger: GGCTGATGAAATCAGAAAGCATGCCTGTGCAATTGA...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTGGACCAATGCAAAATaGATGCCGGGAAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQWTNAK*MPGRKQ
Trigger: CTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGAAAGGGCTGGACCAATaGAAAATGCATGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKKGLDQ*KMHAGK
Trigger: CTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAGCTGTGCAGACTCACTaGCATGTAGAAAAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISAVQTH*HVEKLG
Trigger: ACCAAGCTTTTCTACATGCCAGTGAGTCTGCACAGC...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTACATCCCCGATGAATaGGTAATGCATCAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIYIPDE*VMHQKA
Trigger: GGCCTTCTGATGCATTACCCATTCATCGGGGATGTA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTCTTGGATTTCTCTTTaGATCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCSWISL*ISKEQS
Trigger: GCTCTGTTCCTTAGAGATCCAAAGAGAAATCCAAGA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGAATTGATAAGTCACTaGTCTTGGATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: AGPMQNACREGSSGLRRFELISH*SWISLW
Trigger: CCAAAGAGAAATCCAAGACCAGTGACTTATCAATTC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCCACAGTATTTGCACATaGCATCCAGGTCATTCAACT +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISHSICT*HPGHST
Trigger: AGTTGAATGACCTGGATGCCATGTGCAAATACTGTG...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGAAGAAGGTTCTCCACTaGATGAGCCTCAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKKKVLH*MSLSLA
Trigger: GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTT...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGACTGAGAAAGCAGTCTaGCCTTTGAGAAGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQTEKAV*PLRRKP
Trigger: AGGCTTCCTTCTCAAAGGCCAGACTGCTTTCTCAGT...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCAAAAAGTAACTACCTGTaGCGCAGAAGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPKSNYL*RRRAPQ
Trigger: CTGGGGAGCCCTTCTGCGCCACAGGTAGTTACTTTT...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CCA 90 bp TTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTAAAAGTAACTACCTGTaGCGCAGAAGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LIIKSCWPTTFLGLVICIKSNYL*RRRAPQ
Trigger: CTGGGGAGCCCTTCTGCGCCACAGGTAGTTACTTTT...AATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCCAATGACGCATAGCTaGGCAAGTCTTTCACCTAAC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKPMTHS*ASLSPN
Trigger: GTTAGGTGAAAGACTTGCTCAGCTATGCGTCATTGG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCAGGAAACGTTCTTTTaGCATCTTGTTCAATCATTG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSQETFF*HLVQSL
Trigger: CAATGATTGAACAAGATGTCAAAAGAACGTTTCCTG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATAGTGTACATCCCCGATaGATGGGTAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHSVHPR*MGNASE
Trigger: TTCTGATGCATTACCCATTCATCGGGGATGTACACT...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHSFNCP*RKEIWA
Trigger: AGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGA...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCATTTTGTATGTACAATaGGGTCTGTTAGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCILYVQ*GLLEAP
Trigger: AGGAGCTTCTAACAGACCTCATTGTACATACAAAAT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR GCA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGATGTGATAATGACCAATaGTTCATTTTCTGTATCGTC +
Preference number: 4 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRCDNDQ*FIFCIV
Trigger: GACGATACAGAAAATGAAGCATTGGTCATTATCACA...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp AAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGGCTTCCAGCAAATGCTaGGGAACCTGCTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KSCWPTTFLGLVICISLMASSKC*GTCCFS
Trigger: TGAGAAGCAGCAGGTTCCGCAGCATTTGCTGGAAGC...CATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR GCA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATTTATTCATGAGGTCTaGTCCTCGTGCTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: MQNACREGSSGLRRFSTGFIHEV*SSCFVI
Trigger: TATTACAAAGCACGAGGAGCAGACCTCATGAATAAA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGACTGCCTGGAGCCATTaGTGGGGAAATCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQTAWSH*WGNQLS
Trigger: AGAAAGTTGATTTCCCCAGCAATGGCTCCAGGCAGT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCCCTTTGCACAGTATTTaGACATGGCATCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIPLHSI*TWHPGH
Trigger: ATGACCTGGATGCCATGTGCAAATACTGTGCAAAGG...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAAGTGTCCATCACCTTTaGACAGTATTTGCACATGGC +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISSVHHL*TVFAHG
Trigger: GCCATGTGCAAATACTGTGCAAAGGTGATGGACACT...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGAATTCCCTCTATCAGTaGACCCTGGCGTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQNSLYQ*TLAFLK
Trigger: CTTCAGAAACGCCAGGGTGCACTGATAGAGGGAATT...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCATAAGTCACTGGTCTTaGATTTCTCTTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCISHWS*ISLWIS
Trigger: AGAGATCCAAAGAGAAATCCAAGACCAGTGACTTAT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGAATTGATAAGTCACTaGTCTTGGATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LHVANLSLCALWPYMLLSELISH*SWISLW
Trigger: CCAAAGAGAAATCCAAGACCAGTGACTTATCAATTC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGGGGGTTTCAAAGGGCTaGACCAATGCAAAATGCATG +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKGVSKG*TNAKCM
Trigger: CATGCATTTTGCATTGGTCCAGCCCTTTGAAACCCC...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCACTGTTTCTGAACGCATaGCTGTCTTTTTGGACACAG +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISLFLNA*LSFWTQ
Trigger: CTGTGTCCAAAAAGACAGCCATGCGTTCAGAAACAG...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTTAGAACTTAGCCCTTaGAGGTCAGTTAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISILELSP*RSVRVW
Trigger: CCAGACTCTAACTGACCTCCAAGGGCTAAGTTCTAA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCAGAGATTGCGGTGAGCTaGGATCGCACCATTATACTC +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSEIAVS*DRTIIL
Trigger: GAGTATAATGGTGCGATCTCAGCTCACCGCAATCTC...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGAGTGTACATCCCCGATaGATGGGTAATGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKSVHPR*MGNASE
Trigger: TTCTGATGCATTACCCATTCATCGGGGATGTACACT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCCTTCTAAGTATAACTaGTGGAGGTGCCACACATTC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKPSKYN*WRCHTF
Trigger: GAATGTGTGGCACCTCCATCAGTTATACTTAGAAGG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAATTCACTTACCAAGATaGGTGTCCATCACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISIHLPR*VSITFA
Trigger: TGCAAAGGTGATGGACACTCATCTTGGTAAGTGAAT...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGTGGACAAGGGGTCAATaGCTACTTCTTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKWTRGQ*LLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTCCA...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR GCA 90 bp ATCATTGATCGAAGTTCTTTATCTTGGAAGAATTTGTTCCAAAGACTCCCTTCACTGCTGCTTCTCAGCTaGCCATTAATCCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IIDRSSLSWKNLFQRLPSLLLLS*PLIPFC
Trigger: GCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAG...TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAAAGAACTTCGATCAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTGTCATAGGGATATGTaGTTGGCAGCAGCTTACTCA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQCHRDM*LAAAYS
Trigger: TGAGTAAGCTGCTGCCAAGCACATATCCCTATGACA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCGCAACCCTGCACAGTTaGAAGGTCACTCGCTGTATG +
Preference number: 4 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYIATLHS*KVTRCM
Trigger: CATACAGCGAGTGACCTTGCAACTGTGCAGGGTTGC...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCTTGTTAAAATTCCTCTaGTTGGAGAGAAGTTCTACG +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISLLKFL*LERSST
Trigger: CGTAGAACTTCTCTCCAAGCAGAGGAATTTTAACAA...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATAAGTCACTGGTCTTaGATTTCTCTTTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: GTITTCCNLKPLGLSNISISHWS*ISLWIS
Trigger: AGAGATCCAAAGAGAAATCCAAGACCAGTGACTTAT...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGAGCCTCTGTGCTTTGTaGCCATATATGCTTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKSLCAL*PYMLLS
Trigger: AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTTAGAACTTAGCCCTTaGAGGTCAGTTAGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQLELSP*RSVRVW
Trigger: CCAGACTCTAACTGACCTCCAAGGGCTAAGTTCTAA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446818.6
3UTR CAA 72 bp TTGGAGGGCAGGTGGGAAATCATGTCATTATCACATTaGTCTATAGAGATATATAAGGTTAGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LEGRWEIMSLSH*SIEIYKVSSGR
Trigger: CCTCCCACTGCTAACCTTATATATCTCTATAGACAAATGTGATAATGACATGATTTCCCACCTGCCCTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCACTCCCTTCATCCTGTaGAAGAGGATTATTGATCAT +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISITPFIL*KRIIDH
Trigger: ATGATCAATAATCCTCTTTCACAGGATGAAGGGAGT...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp AAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTACTCCCTTCATCCTGTaGAAGAGGATTATTGATCAT +
Preference number: 4 (lower is better)
Translates to: KRIIDHQILLANNLPRVGTPFIL*KRIIDH
Trigger: ATGATCAATAATCCTCTTTCACAGGATGAAGGGAGT...ACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS-3UTR TCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCATCATGCTCAAAAGTTaGAAACCAAGGTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIIMLKS*KPRFSS
Trigger: ACTGCTGAACCTTGGTTTTCAACTTTTGAGCATGAT...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCATGGACAAGGGGTCAATaGCTACTTCTTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPWTRGQ*LLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTCCA...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp TGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACTGGACAAGGGGTCAATaGCTACTTCTTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: WPTTFLGLVICISLMLLYWTRGQ*LLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTCCA...GTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGTCAATTGCACAGGCATaGTTTCTGATTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKSIAQA*FLISSA
Trigger: GGCTGATGAAATCAGAAAGCATGCCTGTGCAATTGA...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTCAATTGCACAGGCATaGTTTCTGATTTCATCAGCC +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQSIAQA*FLISSA
Trigger: GGCTGATGAAATCAGAAAGCATGCCTGTGCAATTGA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR GCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGAAACCTAAGCCTCTGTaGTTTGTGGCCATATATGCT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKKPKPL*FVAIYA
Trigger: AGCATATATGGCCACAAAGCACAGAGGCTTAGGTTT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CCA 90 bp TCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCATACATTGTGGGAACTaGACAGCGTCACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: SCERGLLIIKSCWPTTFLIHCGN*TASPKV
Trigger: TACTTTTGGTGACGCTGTCCAGTTCCCACAATGTAT...GAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CCA 90 bp ATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: IIKSCWPTTFLGLVICISIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...AGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CCA 90 bp TCATCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCATCATCAAATCTTGTTaGCCAACAACCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SSCERGLLIIKSCWPTTFIIKSC*PTTFLG
Trigger: CCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT...GAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTTTAGCTCTGCGATATaGCTTCCCAATGCAGGAATA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQFSSAI*LPNAGI
Trigger: TATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR TCA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ITTCCNLKPLGLSNISISVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp AAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: KRIIDHQILLANNLPRVGVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...ACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGACTCCCTTCATCCTGTaGAAGAGGATTATTGATCAT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKTPFIL*KRIIDH
Trigger: ATGATCAATAATCCTCTTTCACAGGATGAAGGGAGT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR TCA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCAGGAAACGTTCTTTTaGCATCTTGTTCAATCATTG +
Preference number: 4 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHQETFF*HLVQSL
Trigger: CAATGATTGAACAAGATGTCAAAAGAACGTTTCCTG...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGATCATGCTCAAAAGTTaGAAACCAAGGTTCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKIMLKS*KPRFSS
Trigger: ACTGCTGAACCTTGGTTTTCAACTTTTGAGCATGAT...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR GCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCATCTTGTTCTTCTGGCTaGAGAGGATGTCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPSCSSG*RGCLVS
Trigger: TGAAACTAGACATCCTCTGCAGCCAGAAGAACAAGA...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR GCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTTTATTCATGAGGTCTaGTCCTCGTGCTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIFIHEV*SSCFVI
Trigger: TATTACAAAGCACGAGGAGCAGACCTCATGAATAAA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR GCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCACTGCCTGGAGCCATTaGTGGGGAAATCAACTTTCT +
Preference number: 4 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYITAWSH*WGNQLS
Trigger: AGAAAGTTGATTTCCCCAGCAATGGCTCCAGGCAGT...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCAATACATTGTGGGAACTaGACAGCGTCACCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPIHCGN*TASPKV
Trigger: TACTTTTGGTGACGCTGTCCAGTTCCCACAATGTAT...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CCA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCGAATTGATAAGTCACTaGTCTTGGATTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TITTCCNLKPLGLSNISIELISH*SWISLW
Trigger: CCAAAGAGAAATCCAAGACCAGTGACTTATCAATTC...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR TCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCAATTCACCTTACATGCTaGTGTGGTAAGAGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSIHLTC*CGKRRV
Trigger: AACTCTCCTCTTACCACATCAGCATGTAAGGTGAAT...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp ATCATTGATCGAAGTTCTTTATCTTGGAAGAATTTGTTCCAAAGACTCCCTTCATGGACAAGGGGTCAATaGCTACTTCTTGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: IIDRSSLSWKNLFQRLPSWTRGQ*LLLVLL
Trigger: CAGAAGAACAAGAAGTAGGCATTGACCCCTTGTCCA...TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAAAGAACTTCGATCAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS-3UTR GCA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGTTTATTCATGAGGTCTaGTCCTCGTGCTTTGTAATA +
Preference number: 4 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQFIHEV*SSCFVI
Trigger: TATTACAAAGCACGAGGAGCAGACCTCATGAATAAA...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGTATAACCATATTGAATaGGGTCGCTTTGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKYNHIE*GRFAKR
Trigger: CCTTTTGGCAAAGCGACCCCATTCAATATGGTTATA...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTTCAGATAAGGAATaGTACATTGTGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: QILLANNLPRVGNMYFFNVSDKE*YIVGTG
Trigger: TCCAGTTCCCACAATGTATCATTCCTTATCTGAAAC...ATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR TCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCACTCAACGCTTGGAGATaGACTGATGTTTTTAGAACT +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSLNAWR*TDVFRT
Trigger: AGTTCTAAAAACATCAGTTCATCTCCAAGCGTTGAG...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCATTTAACAGTGACTACTaGTCCAGTGAACAAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSFNSDY*SSEQVQ
Trigger: TTGCACTTGTTCACTGGACCAGTAGTCACTGTTAAA...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCATCTTGGATTTCTCTTTaGATCTCTAAGGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSSWISL*ISKEQS
Trigger: GCTCTGTTCCTTAGAGATCCAAAGAGAAATCCAAGA...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CCA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGGCTTTTACATCAAAGTaGTCTCAAGCCTGTTTATAC +
Preference number: 4 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKAFTSK*SQACLY
Trigger: GTATAAACAGGCTTGAGACCACTTTGATGTAAAAGC...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR TCA 90 bp CAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTGAAAGAGGATTATTaGTCATCAAATCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: QILLANNLPRVGNMYFFNVKEDY*SSNLVG
Trigger: GCCAACAAGATTTGATGATCAATAATCCTCTTTCAC...ATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR TCA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCACAGGAAACGTTCTTTTaGCATCTTGTTCAATCATTG +
Preference number: 4 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSQETFF*HLVQSL
Trigger: CAATGATTGAACAAGATGTCAAAAGAACGTTTCCTG...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR GCA 90 bp GACAGCTTTTACATCAAAGTGGTCTCAAGCCTGTTTATACGAACTTTATATATCAGCTTAGATCCTGTTTaGAGAGATCCTTATAACTTT +
Preference number: 4 (lower is better)
Translates to: DSFYIKVVSSLFIRTLYISLDPV*RDPYNF
Trigger: AAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCT...GATATATAAAGTTCGTATAAACAGGCTTGAGACCACTTTGATGTAAAAGCTGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS TCA 90 bp TCAGGCATGGACGTTGGGGGCGGCGGTGGCTGTCGAGTGCGGGCCTaGAACCAAGAACGGCTCCCCGGGCGGGCGCGCCGGCGTCGGACT +
Preference number: 5 (lower is better)
Translates to: SGMDVGGGGGCRVRA*NQERLPGRARRRRT
Trigger: AGTCCGACGCCGGCGCGCCCGCCCGGGGAGCCGTTCTTGGTTTCAGGCCCGCACTCGACAGCCACCGCCGCCCCCAACGTCCATGCCTGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414318.2
CDS-3UTR CAA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGGTGAAGCCAGAGTCCTaGCTGCTGTCGTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPEVKPES*LLSSSG
Trigger: TCCTGATGACGACAGCAGCAAGGACTCTGGCTTCAC...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGGCAATTGCCCAGTGGTaGAAGGTCAGACAACCTGCT +
Preference number: 5 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPEAIAQW*KVRQPA
Trigger: AGCAGGTTGTCTGACCTTCAACCACTGGGCAATTGC...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS TCA 90 bp GCAGGACTGGGCACTGTGGTCAGATGTCCAGGGGACTCACAATGGTaGAGCCAGAGTCCTTGCTGCTGTCGTCATCAGGACTGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: AGLGTVVRCPGDSQW*SQSPCCCRHQDWSW
Trigger: CCAGCTCCAGTCCTGATGACGACAGCAGCAAGGACTCTGGCTTCACCATTGTGAGTCCCCTGGACATCTGACCACAGTGCCCAGTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS GCA 90 bp CTGAGGCCGTCTGCAAACAAGGCATCCCAGACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCAAATAGCAGCCGCACCCACCTTAAC +
Preference number: 5 (lower is better)
Translates to: LRPSANKASQTTRRS*RGNSRPNSSRTHLN
Trigger: GTTAAGGTGGGTGCGGCTGCTATTTGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGTCTGGGATGCCTTGTTTGCAGACGGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS GCA 90 bp CTGAGGCCGTCTGCAAACAAGGCATCCCAGACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCAAATAGCAGCCGCACCCACCTTTCA +
Preference number: 5 (lower is better)
Translates to: LRPSANKASQTTRRS*RGNSRPNSSRTHLS
Trigger: TGAAAGGTGGGTGCGGCTGCTATTTGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGTCTGGGATGCCTTGTTTGCAGACGGCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414318.2
CDS CCA 90 bp AGCGTCACCAAAAGTAACTACCTGCGCGCTCCCTCCCGTGAGGGGTaGAAGGCAGACAGCCCATTCCAGCACTTGTGCACTCCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: SVTKSNYLRAPSREG*KADSPFQHLCTPVS
Trigger: GGAAACTGGAGTGCACAAGTGCTGGAATGGGCTGTCTGCCTTCCACCCCTCACGGGAGGGAGCGCGCAGGTAGTTACTTTTGGTGACGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415814.6
ENST00000428355.5
ENST00000444471.5
ENST00000497531.5
CDS-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: AIFPSQPLGQLGLQARATEELLL*PPGTGP
Trigger: TGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTC...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGAGCCTCAGTCTGGCCTaGGGGCCACTGAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGSLSLA*GPLKGG
Trigger: GCCACCCTTCAGTGGCCCCAAGGCCAGACTGAGGCT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCCCTGCTGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGGTCATTCAACTGCCCTaGAAGGAAGGAAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: ALLPRDGQVCGPFQSVPEVIQLP*KEGNLG
Trigger: GCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGAC...CTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCAGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGTGAAGCCAGAGTCCTaGCTGCTGTCGTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTVKPES*LLSSSG
Trigger: TCCTGATGACGACAGCAGCAAGGACTCTGGCTTCAC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS GCA 90 bp ATGATACATTGTGGGAACTGGACAGCGTCACCAAAAGTAACTACCTaGGCGCTCCCTCCCGTGAGGGGTGGAAGGCAGACAGCCCATTCC +
Preference number: 5 (lower is better)
Translates to: MIHCGNWTASPKVTT*ALPPVRGGRQTAHS
Trigger: GGAATGGGCTGTCTGCCTTCCACCCCTCACGGGAGGGAGCGCGCAGGTAGTTACTTTTGGTGACGCTGTCCAGTTCCCACAATGTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415814.6
ENST00000428355.5
ENST00000444471.5
ENST00000497531.5
CDS-3UTR CAA 90 bp TGCCCAGGGATGGCCAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: CPGMARSVVLSSLSQSPGDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...ACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTGGCCATCCCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTTCAGGGGAGCACCTTaGGCATTGGTCCGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTFRGAP*ALVRLL
Trigger: TAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGAA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCCCTCTGCTGCTGCTGTaGCTGTTGCAAGTGATGGCT +
Preference number: 5 (lower is better)
Translates to: AIFPSQPLGQLGLQARATPLLLL*LLQVMA
Trigger: AGCCATCACTTGCAACAGCAACAGCAGCAGCAGAGG...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAGCCTCAGTCTGGCCTaGGGGCCACTGAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSLSLA*GPLKGG
Trigger: GCCACCCTTCAGTGGCCCCAAGGCCAGACTGAGGCT...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACAAAGGAGGGATGGAATaGGTTGGAGCCGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYKGGME*VGAATE
Trigger: TTCTGTGGCGGCTCCAACCAATTCCATCCCTCCTTT...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCAGAAGGAAGCCTGGCTaGCCAGGTGCCATCCTCAAT +
Preference number: 5 (lower is better)
Translates to: SQGATVCICQAIAQWLKVRRKPG*PGAILN
Trigger: ATTGAGGATGGCACCTGGCAAGCCAGGCTTCCTTCT...GACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS CCA 90 bp AAAATTAGTCGGGAGTGGTGGCGGGCGGCTATAATCCTGGCTACCTaGGAGGCTGAGGCAGGAGAAGTGTTTGAAACCATGAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KISREWWRAAIILAT*EAEAGEVFETMRER
Trigger: CCTCTCCCTCATGGTTTCAAACACTTCTCCTGCCTCAGCCTCCCAGGTAGCCAGGATTATAGCCGCCCGCCACCACTCCCGACTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CTGGCATGTCAGACCCGGTCCCGGCAGTGGGGCCCAGGATACGGGGTTCACAGCACGACTCTCAATTGTTaGCAAATTTGCTTCCAAAAC +
Preference number: 5 (lower is better)
Translates to: LACQTRSRQWGPGYGVHSTTLNC*QICFQN
Trigger: GTTTTGGAAGCAAATTTGCAAACAATTGAGAGTCGT...GCTGTGAACCCCGTATCCTGGGCCCCACTGCCGGGACCGGGTCTGACATGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTAGCCTCAGTCTGGCCTaGGGGCCACTGAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSSLSLA*GPLKGG
Trigger: GCCACCCTTCAGTGGCCCCAAGGCCAGACTGAGGCT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTGGAGCACCTTTGGCATaGGTCCGGCTTTTATTCATG +
Preference number: 5 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSGAPLA*VRLLFM
Trigger: CATGAATAAAAGCCGGACCAATGCCAAAGGTGCTCC...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGAGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHREELLL*PPGTGP
Trigger: TGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTC...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: AGPMQNACREGSSGLRRFEELLL*PPGTGP
Trigger: TGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGGTTGCAAGTGATGGCTaGGGGCCTCTGCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKVASDG*GPLLRS
Trigger: GGACCTCAGCAGAGGCCCCAAGCCATCACTTGCAAC...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCGTCATTCAACTGCCCTaGAAGGAAGGAAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTVIQLP*KEGNLG
Trigger: GCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGAC...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGTGAAGCCAGAGTCCTaGCTGCTGTCGTCATCAGGA +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAVKPES*LLSSSG
Trigger: TCCTGATGACGACAGCAGCAAGGACTCTGGCTTCAC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCCTAAGCCTCTGTGCTTaGTGGCCATATATGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTLSLCA*WPYMLL
Trigger: GAGAAGCATATATGGCCACAAAGCACAGAGGCTTAG...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACAAGAAGGGAAGGGGTaGTGTAGAAATCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQQEGKG*CRNPAS
Trigger: GGATGCAGGATTTCTACACAACCCCTTCCCTTCTTG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSEELLL*PPGTGP
Trigger: TGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGCTGCTGCTGTTGCTGTaGCAAGTGATGGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKLLLLL*QVMAWG
Trigger: GCCCCAAGCCATCACTTGCAACAGCAACAGCAGCAG...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCTTTCTGCCCATAGTTTaGCTGTGTGAGCGAGAACGT +
Preference number: 5 (lower is better)
Translates to: AIFPSQPLGQLGLQARATFLPIV*LCERER
Trigger: ACGTTCTCGCTCACACAGCAAAACTATGGGCAGAAA...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCGTCATTCAACTGCCCTaGAAGGAAGGAAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: AIFPSQPLGQLGLQARATVIQLP*KEGNLG
Trigger: GCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGAC...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AGCCAGGGAGCTACTGTGTGCATCTGCCAGGCAATTGCCCAGTGGTTGAAGGTCCTAAGCCTCTGTGCTTaGTGGCCATATATGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SQGATVCICQAIAQWLKVLSLCA*WPYMLL
Trigger: GAGAAGCATATATGGCCACAAAGCACAGAGGCTTAG...GACCTTCAACCACTGGGCAATTGCCTGGCAGATGCACACAGTAGCTCCCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCGGAACCTGCTGCTTCTCAGCTGCCCATTAATCCCCTTCTGCCTTATTGTTGCGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: AEPAASQLPINPLLPYCCVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...GCAACAATAAGGCAGAAGGGGATTAATGGGCAGCTGAGAAGCAGCAGGTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGGAGCACCTTTGGCATaGGTCCGGCTTTTATTCATG +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAGAPLA*VRLLFM
Trigger: CATGAATAAAAGCCGGACCAATGCCAAAGGTGCTCC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCGTTGCAAGTGATGGCTaGGGGCCTCTGCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: GTITTCCNLKPLGLSNISVASDG*GPLLRS
Trigger: GGACCTCAGCAGAGGCCCCAAGCCATCACTTGCAAC...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACCCCATGTCTGATGCTTaGAGGGATAGAAGATACGAA +
Preference number: 5 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDPMSDA*RDRRYE
Trigger: TTCGTATCTTCTATCCCTCAAAGCATCAGACATGGG...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp AGAGTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAACCCATGTCTGATGCTTaGAGGGATAGAAGATACGAA +
Preference number: 5 (lower is better)
Translates to: RVGWGLGKGPESPVCMWQPMSDA*RDRRYE
Trigger: TTCGTATCTTCTATCCCTCAAAGCATCAGACATGGG...TTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CAA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTAAAGCAGTCTGGCCTTaGAGAAGGAAGCCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVKAVWP*RRKPGL
Trigger: CAAGCCAGGCTTCCTTCTCAAAGGCCAGACTGCTTT...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTCAACTGAGGCCGCATTaGAGAGCACACACTCAATAC +
Preference number: 5 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVQLRPH*RAHTQY
Trigger: GTATTGAGTGTGTGCTCTCAAATGCGGCCTCAGTTG...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTGGAGCACCTTTGGCATaGGTCCGGCTTTTATTCATG +
Preference number: 5 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVGAPLA*VRLLFM
Trigger: CATGAATAAAAGCCGGACCAATGCCAAAGGTGCTCC...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGATTCAGGGGAGCACCTTaGGCATTGGTCCGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRFRGAP*ALVRLL
Trigger: TAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGAA...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCCCTCTGCTGCTGCTGTaGCTGTTGCAAGTGATGGCT +
Preference number: 5 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCPLLLL*LLQVMA
Trigger: AGCCATCACTTGCAACAGCAACAGCAGCAGCAGAGG...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTTCTGCCCATAGTTTaGCTGTGTGAGCGAGAACGT +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAFLPIV*LCERER
Trigger: ACGTTCTCGCTCACACAGCAAAACTATGGGCAGAAA...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGTCATTCAACTGCCCTaGAAGGAAGGAAATTTGGGC +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAVIQLP*KEGNLG
Trigger: GCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGAC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCACCTTTGCACAGTATTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLATFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAATACTGTGCAAAGGT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGAGTGTCCATCACCTTaGCACAGTATTTGCACATGG +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGECPSP*HSICTW
Trigger: CCATGTGCAAATACTGTGCAAAGGTGATGGACACTC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTGTAATCCCAGCTACTaGGGAGGCCTAGAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCCNPSY*GGLEGR
Trigger: CCTCCCTTCTAGGCCTCCCAAGTAGCTGGGATTACA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429383.8
CDS TCA 90 bp GGCTGTGCAGACTCACTGGCATGTAGAAAAGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGTGCTAACAGTTCGTGCATGCCCTGT +
Preference number: 5 (lower is better)
Translates to: GCADSLACRKAWWSQ*RTKTIGANSSCMPC
Trigger: ACAGGGCATGCACGAACTGTTAGCACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGCTTTTCTACATGCCAGTGAGTCTGCACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS GCA 90 bp AGACAGCCCATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTTaGTCGCAGGCTCCCTCCTTAATAGAGAATCTGGATAGTAGCATT +
Preference number: 5 (lower is better)
Translates to: RQPIPALVHSSFHLV*SQAPSLIENLDSSI
Trigger: AATGCTACTATCCAGATTCTCTATTAAGGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATGGGCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444471.5
CDS CCA 90 bp GTTGCCTCCAGGTACAGGGCCACCTGCACTGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCCAAAATTAATCAGGCTATTAGAGAC +
Preference number: 5 (lower is better)
Translates to: VASRYRATCTAWSHC*GNQLSSKINQAIRD
Trigger: GTCTCTAATAGCCTGATTAATTTTGGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCTGGAGGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS CCA 90 bp GCATCCTCCAAGGTGCTGGCTATCATCAATCTTCTCTTTCCTCACTaGCCACCTCCTCACAAAACAAAGCAGCCCAAGAAACCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ASSKVLAIINLLFPH*PPPHKTKQPKKPSS
Trigger: TGAAGAGGGTTTCTTGGGCTGCTTTGTTTTGTGAGGAGGTGGCCAGTGAGGAAAGAGAAGATTGATGATAGCCAGCACCTTGGAGGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465884.1
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCATAAGGAATGATACATaGTGGGAACTGGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAIRNDT*WELDSV
Trigger: GACGCTGTCCAGTTCCCACAATGTATCATTCCTTAT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTTTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CAGGTCTGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACTTATCTTGGAAGAATTaGTTCCAAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: QVCGPFQSVPEPWWEQLYLSWKN*FQRLPS
Trigger: TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAA...GTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GTCGGGTGGGGATTAGGTAAGGGCCCAGAAAGCCCTGTCTGCATGTGGCAAACCTTATCTTGGAAGAATTaGTTCCAAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: VGWGLGKGPESPVCMWQTLSWKN*FQRLPS
Trigger: TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAA...GGTTTGCCACATGCAGACAGGGCTTTCTGGGCCCTTACCTAATCCCCACCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCTTCAGGGGAGCACCTTaGGCATTGGTCCGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCFRGAP*ALVRLL
Trigger: TAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGAA...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CATCCTCACCCACTCCTGTTAGAATTCCTGCGCAGGCAAAGGAGAGGAAAAGCATTTCTGCCCATAGTTTaGCTGTGTGAGCGAGAACGT +
Preference number: 5 (lower is better)
Translates to: HPHPLLLEFLRRQRRGKAFLPIV*LCERER
Trigger: ACGTTCTCGCTCACACAGCAAAACTATGGGCAGAAA...TGCTTTTCCTCTCCTTTGCCTGCGCAGGAATTCTAACAGGAGTGGGTGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTGAGTGTCCATCACCTTaGCACAGTATTTGCACATGG +
Preference number: 5 (lower is better)
Translates to: TRVNWSSAGKANHREVLVECPSP*HSICTW
Trigger: CCATGTGCAAATACTGTGCAAAGGTGATGGACACTC...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCATAGGGATATGTGCTaGGCAGCAGCTTACTCAGAG +
Preference number: 5 (lower is better)
Translates to: AGPMQNACREGSSGLRRFHRDMC*AAAYSE
Trigger: CTCTGAGTAAGCTGCTGCCAAGCACATATCCCTATG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp TGTGCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACCATGACCCACTGTCCTaGTATGTCTCTCTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: CASTLTHRLFLGGQHDCHHDPLS*YVSLLQ
Trigger: TTGGAGGAGAGAGACATACAAGGACAGTGGGTCATG...GTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCGTAACTACATCGCCTTaGTTCAATTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLAVTTSP*FNCTGM
Trigger: CATGCCTGTGCAATTGAACAAAGGCGATGTAGTTAC...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446818.6
CDS-3UTR CAA 90 bp CTTTGTGGCCATATATGCTTCTCTCTAAGGGGTTTCAAAGGGCTGGACCAATGCAGATGGACACATCACTaGAGGTCAGGAGGTCGATAC +
Preference number: 5 (lower is better)
Translates to: LCGHICFSLRGFKGLDQCRWTHH*RSGGRY
Trigger: GTATCGACCTCCTGACCTCAAGTGATGTGTCCATCT...GCATTGGTCCAGCCCTTTGAAACCCCTTAGAGAGAAGCATATATGGCCACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGAGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: MQNACREGSSGLRRFSTGVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TGTGGTCCTTTCCAGTCTGTCCCAGAGCCCTGGTGGGAACAGCTCTACACCTCTCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: CGPFQSVPEPWWEQLYTSPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...AGAGGTGTAGAGCTGTTCCCACCAGGGCTCTGGGACAGACTGGAAAGGACCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCAATATTTCCATCTCAGCCTCTTGGGCAGCTGGGACTACAGGCACGTGCCACCACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: AIFPSQPLGQLGLQARATTTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...GGTGGCACGTGCCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAAATATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGGATAAGTCACTGGTCTaGGATTTCTCTTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGDKSLV*DFSLDL
Trigger: GAGATCCAAAGAGAAATCCAAGACCAGTGACTTATC...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGTTGCAAGTGATGGCTaGGGGCCTCTGCTGAGGTCC +
Preference number: 5 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQVASDG*GPLLRS
Trigger: GGACCTCAGCAGAGGCCCCAAGCCATCACTTGCAAC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGCTGCTGCTGTTGCTGTaGCAAGTGATGGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQLLLLL*QVMAWG
Trigger: GCCCCAAGCCATCACTTGCAACAGCAACAGCAGCAG...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCCTGCTGCTGTTGCTGTaGCAAGTGATGGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISILLLLL*QVMAWG
Trigger: GCCCCAAGCCATCACTTGCAACAGCAACAGCAGCAG...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCTAAGCCTCTGTGCTTaGTGGCCATATATGCTTCTC +
Preference number: 5 (lower is better)
Translates to: AGPMQNACREGSSGLRRFLSLCA*WPYMLL
Trigger: GAGAAGCATATATGGCCACAAAGCACAGAGGCTTAG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CATGGTGGGTGCCTAGTGACTCTTGCAGGGCGAGTGACCCTCAGCTATCATGACTGGCTTACAGTAATCTaGTTTTCTGGCTATGAAAGA +
Preference number: 5 (lower is better)
Translates to: HGGCLVTLAGRVTLSYHDWLTVI*FSGYER
Trigger: TCTTTCATAGCCAGAAAACAAGATTACTGTAAGCCA...GTCATGATAGCTGAGGGTCACTCGCCCTGCAAGAGTCACTAGGCACCCACCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCTGCAGTACCTACACTaGACTTCCAAGAAGGGAAGG +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSLQYLH*TSKKGR
Trigger: CCTTCCCTTCTTGGAAGTCAAGTGTAGGTACTGCAG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATTTCCATCTCAGCCTCTaGGGCAGCTGGGACTACAGG +
Preference number: 5 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHFHLSL*GSWDYR
Trigger: CCTGTAGTCCCAGCTGCCCAAGAGGCTGAGATGGAA...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS TCA 90 bp TGTAAAGTAACATGGCTACGAAGATATAATCTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGGCATCCCAGACCACCAGAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: CKVTWLRRYNLLNPG*GRLQTRHPRPPEGP
Trigger: AGGACCTTCTGGTGGTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAGATTATATCTTCGTAGCCATGTTACTTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 90 bp CTTAGCCCTTGGAGGTCAGTTAGAGTCTGGACAGGAACAGAAACCTaGGCATCGCTTCCTGTAACTACATCGCCTTTGTTCAATTGCACA +
Preference number: 5 (lower is better)
Translates to: LSPWRSVRVWTGTET*ASLPVTTSPLFNCT
Trigger: TGTGCAATTGAACAAAGGCGATGTAGTTACAGGAAGCGATGCTCAGGTTTCTGTTCCTGTCCAGACTCTAACTGACCTCCAAGGGCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429924.6
ENST00000446818.6
CDS CCA 90 bp TGGTTGTCCGCAATGGTGATCTGTTCGTTCTCTTCGGCCTCTAGCTaGCTCTGGTTAAAACGCAGGGAACCTTTTAGAATGTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: WLSAMVICSFSSASS*LWLKRREPFRMSLI
Trigger: GATCAAAGACATTCTAAAAGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCACCATTGCGGACAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCGGAGCACCTTTGGCATaGGTCCGGCTTTTATTCATG +
Preference number: 5 (lower is better)
Translates to: GTITTCCNLKPLGLSNISGAPLA*VRLLFM
Trigger: CATGAATAAAAGCCGGACCAATGCCAAAGGTGCTCC...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCTGCTGCTGTTGCTGTaGCAAGTGATGGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQLLLLL*QVMAWG
Trigger: GCCCCAAGCCATCACTTGCAACAGCAACAGCAGCAG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATTTCTGCCCATAGTTTaGCTGTGTGAGCGAGAACGT +
Preference number: 5 (lower is better)
Translates to: MQNACREGSSGLRRFSTGFLPIV*LCERER
Trigger: ACGTTCTCGCTCACACAGCAAAACTATGGGCAGAAA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTACCTTTGCACAGTATTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSTFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAATACTGTGCAAAGGT...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGATGGGTGGGAATGAACTaGGGTTTTTCCCTTTATTCC +
Preference number: 5 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRWVGMN*GFSLYS
Trigger: GGAATAAAGGGAAAAACCCAAGTTCATTCCCACCCA...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCATCAACTCTGACTCACAGGTTATTCTTAGGAGGCCAGCATGACTGCCACAGAAAATCCTGCATCCTCTaGGCATGTGGAATGTTCTCT +
Preference number: 5 (lower is better)
Translates to: ASTLTHRLFLGGQHDCHRKSCIL*ACGMFS
Trigger: AGAGAACATTCCACATGCCAAGAGGATGCAGGATTT...TCTGTGGCAGTCATGCTGGCCTCCTAAGAATAACCTGTGAGTCAGAGTTGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGCAGCGGAGAGCCTTATaGGCATGGTGGGTGCCTAGT +
Preference number: 5 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKQRRAL*AWWVPS
Trigger: ACTAGGCACCCACCATGCCAATAAGGCTCTCCGCTG...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS GCA 90 bp CAGGGCCAAAGTAATTCACTTACCAAGATGAGTGTCCATCACCTTTaGACAGTATTTGCACATGGCATCCAGGTCATTCAACTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: QGQSNSLTKMSVHHL*TVFAHGIQVIQLPL
Trigger: CAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGGTAAGTGAATTACTTTGGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCTTGGGGACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: KQWFKKVLHWMSLSLALGTTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...CCCCAAGGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATGAGCCTCAGTCTGGCCACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GRKQWFKKVLHWMSLSLATTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...GGCCAGACTGAGGCTCATCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: GTITTCCNLKPLGLSNISDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCGATAAGTCACTGGTCTaGGATTTCTCTTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: AGPMQNACREGSSGLRRFDKSLV*DFSLDL
Trigger: GAGATCCAAAGAGAAATCCAAGACCAGTGACTTATC...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTTCAGGGGAGCACCTTaGGCATTGGTCCGGCTTTTA +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISIFRGAP*ALVRLL
Trigger: TAAAAGCCGGACCAATGCCAAAGGTGCTCCCCTGAA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGCCTCTGCTGCTGCTGTaGCTGTTGCAAGTGATGGCT +
Preference number: 5 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQPLLLL*LLQVMA
Trigger: AGCCATCACTTGCAACAGCAACAGCAGCAGCAGAGG...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCACCTTTGCACAGTATTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GTITTCCNLKPLGLSNISTFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAATACTGTGCAAAGGT...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TTATTCCTAAGCTTAGATCCTGTTTGCAGAGATCCTTATAACTTTGAGAGGTCAGAGGGATGGAATTGGTaGGAGCCGCCACAGAACGGC +
Preference number: 5 (lower is better)
Translates to: LFLSLDPVCRDPYNFERSEGWNW*EPPQNG
Trigger: GCCGTTCTGTGGCGGCTCCAACCAATTCCATCCCTC...TGACCTCTCAAAGTTATAAGGATCTCTGCAAACAGGATCTAAGCTTAGGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGTTGAATGGGGTCGCTTaGCCAAAAGGAGAAATCATT +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKLNGVA*PKGEII
Trigger: AATGATTTCTCCTTTTGGCAAAGCGACCCCATTCAA...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAAATCTTCCCACCTaGGCTTTCCACAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISISNLPT*AFHSAG
Trigger: CCCAGCACTGTGGAAAGCCAAGGTGGGAAGATTTGA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS CCA 90 bp TCCGCAATGGTGATCTGTTCGTTCTCTTCGGCCTCTAGCTGGCTCTaGTTAAAACGCAGGGAACCTTTTAGAATGTCTTTGATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SAMVICSFSSASSWL*LKRREPFRMSLICF
Trigger: AAAACAGATCAAAGACATTCTAAAAGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCACCATTGCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: MQNACREGSSGLRRFSTGSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GGTTTCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTTCTGGTTCATTCTATaGCATTTAGCTCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: GFKGLDQCKMHAGKEAVVFWFIL*HLALRY
Trigger: ATATCGCAGAGCTAAATGCAATAGAATGAACCAGAA...AACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS-3UTR CAA 90 bp ATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCTCCACTGGATCTACAGTAGCTGACTaGAGAGTGAGTCACCATTTT +
Preference number: 5 (lower is better)
Translates to: MQNACREGSSGLRRFSTGSTVAD*RVSHHF
Trigger: AAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA...TCCAGTGGAGAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTTTATTTCTTTCCGGATaGCAGTTACCTCTGAACATT +
Preference number: 5 (lower is better)
Translates to: TRVNWSSAGKANHREVLVLFLSG*QLPLNI
Trigger: AATGTTCAGAGGTAACTGCAATCCGGAAAGAAATAA...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAAGAGTCAACTGGTCATCTGCAGGCAAGGCAAATCACAGGGAGGTCCTGGTTTTTATTATAACCATATaGAATGGGGTCGCTTTGCCA +
Preference number: 5 (lower is better)
Translates to: TRVNWSSAGKANHREVLVFIITI*NGVALP
Trigger: TGGCAAAGCGACCCCATTCAATATGGTTATAATAAA...AACCAGGACCTCCCTGTGATTTGCCTTGCCTGCAGATGACCAGTTGACTCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGATTTTTCGCCTATATGTaGATAAAACCCAATGACGCA +
Preference number: 5 (lower is better)
Translates to: STVADLRVSHHFLGGQVGFFAYM*IKPNDA
Trigger: TGCGTCATTGGGTTTTATCAACATATAGGCGAAAAA...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp GCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGAAGGTTCCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: AGPMQNACREGSSGLRRFPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...GAACCTTCTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: KRIIDHQILLANNLPRVGDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...ACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp TCAAAGGGCTGGACCAATGCAAAATGCATGCCGGGAAGGAAGCAGTGGTTTAAGTTATCTTGGAAGAATTaGTTCCAAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: SKGWTNAKCMPGRKQWFKLSWKN*FQRLPS
Trigger: TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAA...CTTAAACCACTGCTTCCTTCCCGGCATGCATTTTGCATTGGTCCAGCCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGACCTTTGCACAGTATTaGCACATGGCATCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQTFAQY*HMASRS
Trigger: TGACCTGGATGCCATGTGCAAATACTGTGCAAAGGT...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATGAGTGTCCATCACCTTaGCACAGTATTTGCACATGG +
Preference number: 5 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHECPSP*HSICTW
Trigger: CCATGTGCAAATACTGTGCAAAGGTGATGGACACTC...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TCTACAGTAGCTGACTTGAGAGTGAGTCACCATTTTCTTGGAGGGCAGGTGGGATTCTGGTTCATTCTATaGCATTTAGCTCTGCGATAT +
Preference number: 5 (lower is better)
Translates to: STVADLRVSHHFLGGQVGFWFIL*HLALRY
Trigger: ATATCGCAGAGCTAAATGCAATAGAATGAACCAGAA...TCCCACCTGCCCTCCAAGAAAATGGTGACTCACTCTCAAGTCAGCTACTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS GCA 90 bp GTACGACTCTCAATTGTTTGCAAATTTGCTTCCAAAACTCAGGAATaGACTACTCAACTGAGGCCGCATTTGAGAGCACACACTCAATAC +
Preference number: 5 (lower is better)
Translates to: VRLSIVCKFASKTQE*TTQLRPHLRAHTQY
Trigger: GTATTGAGTGTGTGCTCTCAAATGCGGCCTCAGTTGAGTAGTGCATTCCTGAGTTTTGGAAGCAAATTTGCAAACAATTGAGAGTCGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS CCA 90 bp TCTCCTTATGTTGCATTTATTCAATTTGTGGGCTCCTGCTGCAGGTaGTCCCTGAGACAATATCATAGAAGATTTACCAGGTTCTCAGGT +
Preference number: 5 (lower is better)
Translates to: SPYVAFIQFVGSCCR*SLRQYHRRFTRFSG
Trigger: ACCTGAGAACCTGGTAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAAATGCAACATAAGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444471.5
ENST00000480435.5
CDS-3UTR CAA 90 bp ATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: IIKSCWPTTFLGLVICISVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...AGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp CTGCATGTGGCAAACCTAAGCCTCTGTGCTTTGTGGCCATATATGCTTCTCTCTCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: LHVANLSLCALWPYMLLSPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...AGAGAGAAGCATATATGGCCACAAAGCACAGAGGCTTAGGTTTGCCACATGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGAGTGTCCATCACCTTaGCACAGTATTTGCACATGG +
Preference number: 5 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQECPSP*HSICTW
Trigger: CCATGTGCAAATACTGTGCAAAGGTGATGGACACTC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCGTAACTACATCGCCTTaGTTCAATTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISIVTTSP*FNCTGM
Trigger: CATGCCTGTGCAATTGAACAAAGGCGATGTAGTTAC...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS TCA 90 bp ATGTTGCATTTATTCAATTTGTGGGCTCCTGCTGCAGGTGGTCCCTaGGACAATATCATAGAAGATTTCTTGTGGGAGAACTTTACTGGT +
Preference number: 5 (lower is better)
Translates to: MLHLFNLWAPAAGGP*DNIIEDFLWENFTG
Trigger: ACCAGTAAAGTTCTCCCACAAGAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAAATGCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423331.6
ENST00000507877.5
CDS GCA 90 bp CTTGAATATTTACAAGATGAGTGTCCATCACCTTTGCACAGTATTTaGACATGGCATCCAGGTCATTCAACTGCCCTTGAAGGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LEYLQDECPSPLHSI*TWHPGHSTALEGRK
Trigger: TTTCCTTCCTTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGTAAATATTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS CCA 90 bp TCTCCTTATGTTGCATTTATTCAATTTGTGGGCTCCTGCTGCAGGTaGTCCCTGAGACAATATCATAGAAGATTTCTTGTGGGAGAACTT +
Preference number: 5 (lower is better)
Translates to: SPYVAFIQFVGSCCR*SLRQYHRRFLVGEL
Trigger: AAGTTCTCCCACAAGAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAAATGCAACATAAGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507877.5
CDS-3UTR CAA 90 bp ATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAGTCAATGCCTACTTCTaGTTCTTCTGGCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: IKSCWPTTFLGLVICISLVNAYF*FFWLQR
Trigger: CCTCTGCAGCCAGAAGAACAAGAAGTAGGCATTGAC...TAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp GGCACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: GTITTCCNLKPLGLSNISPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...GGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: KRIIDHQILLANNLPRVGSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...ACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp TCATCCTGTGAAAGAGGATTATTGATCATCAAATCTTGTTGGCCAACAACCTTCGATCATCAAATCTTGTaGGCCAACAACCTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SSCERGLLIIKSCWPTTFDHQIL*ANNLPR
Trigger: CCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATC...GAAGGTTGTTGGCCAACAAGATTTGATGATCAATAATCCTCTTTCACAGGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp CACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATGATAAGTCACTGGTCTaGGATTTCTCTTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: HNHNLLQPQTPGFKQYFHDKSLV*DFSLDL
Trigger: GAGATCCAAAGAGAAATCCAAGACCAGTGACTTATC...ATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TCCCTGCTAGAGTTTAAGAGCAAATTGCAGAACCAATTAGAACCCTCTCTACAGTTAGAACTTAGCCCTTaGTTCAATTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: SLLEFKSKLQNQLEPSLQLELSP*FNCTGM
Trigger: CATGCCTGTGCAATTGAACAAAGGGCTAAGTTCTAA...CTGTAGAGAGGGTTCTAATTGGTTCTGCAATTTGCTCTTAAACTCTAGCAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTTAAAATTCCTCTGCTaGGAGAGAAGTTCTACGGGA +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISILKFLC*ERSSTG
Trigger: TCCCGTAGAACTTCTCTCCAAGCAGAGGAATTTTAA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp AATTGTGATTCGGTCTTTTCTAACTGTGAGTGTGATACTGGGTACGTAACTCAGGATAAGTCACTGGTCTaGGATTTCTCTTTGGATCTC +
Preference number: 5 (lower is better)
Translates to: NCDSVFSNCECDTGYVTQDKSLV*DFSLDL
Trigger: GAGATCCAAAGAGAAATCCAAGACCAGTGACTTATC...CTGAGTTACGTACCCAGTATCACACTCACAGTTAGAAAAGACCGAATCACAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000446818.6
CDS-3UTR CAA 90 bp GTTCATTCTATTGCATTTAGCTCTGCGATATGGCTTCCCAATGCAGGAATAAAGTTAGAACTTAGCCCTTaGTTCAATTGCACAGGCATG +
Preference number: 5 (lower is better)
Translates to: VHSIAFSSAIWLPNAGIKLELSP*FNCTGM
Trigger: CATGCCTGTGCAATTGAACAAAGGGCTAAGTTCTAA...CTTTATTCCTGCATTGGGAAGCCATATCGCAGAGCTAAATGCAATAGAATGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253692.11
ENST00000429383.8
CDS TCA 90 bp TTTGCACAGTATTTGCACATGGCATCCAGGTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCTTCTAATTCTTCTTCAGATTCTTTT +
Preference number: 5 (lower is better)
Translates to: FAQYLHMASRSFNCP*RKEIWASNSSSDSF
Trigger: AAAAGAATCTGAAGAAGAATTAGAAGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS-3UTR CAA 90 bp ATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: IIKSCWPTTFLGLVICISSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...AGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCATCCCCTTCTGCCTTATaGTTGCCAAGTAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPSPSAL*LPSNCC
Trigger: ACAACAATTACTTGGCAACAATAAGGCAGAAGGGGA...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CAA 90 bp ACAATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTTATCTTGGAAGAATTaGTTCCAAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: TITTCCNLKPLGLSNISILSWKN*FQRLPS
Trigger: TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAA...GATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TCCAGTGTAACTAAATGTTTAATGTGTTATCTGACCCTGTGGCATACACTCAAGCCCTTTATTCCTCAGTaGACAGGTATATACAGCTCT +
Preference number: 5 (lower is better)
Translates to: SSVTKCLMCYLTLWHTLKPFIPQ*TGIYSS
Trigger: AGAGCTGTATATACCTGTCAACTGAGGAATAAAGGG...CTTGAGTGTATGCCACAGGGTCAGATAACACATTAAACATTTAGTTACACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS-3UTR CAA 90 bp ATCACAACTTGCTGCAACCTCAAACCCCTGGGTTTAAGCAATATTTCCATCTCAAGCATGAGAATCCTTTaGTTAAAATTCCTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: ITTCCNLKPLGLSNISISSMRIL*LKFLCL
Trigger: CAAGCAGAGGAATTTTAACAAAAGGATTCTCATGCT...TGAGATGGAAATATTGCTTAAACCCAGGGGTTTGAGGTTGCAGCAAGTTGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS-3UTR CAA 90 bp TGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: WPTTFLGLVICISLMLLYPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...GTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CAA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCACCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CAA 90 bp GATCGAAGTTCTTTATCTTGGAAGAATTTGTTCCAAAGACTCCCTTCATCCTGTCCTTCTGCCTTATTGTaGCCAAGTAATTGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: DRSSLSWKNLFQRLPSSCPSALL*PSNCCL
Trigger: TAAACAACAATTACTTGGCAACAATAAGGCAGAAGG...ACAGGATGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAAAGAACTTCGATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS-3UTR CAA 90 bp GCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTGCTATACCAACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: ANNLPRVGNMYFFNVAIPTTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...TGGTATAGCAACATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412981.5
ENST00000430169.5
ENST00000452492.6
CDS-3UTR CAA 90 bp TTGATCATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LIIKSCWPTTFLGLVICITTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...AATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGATGATCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp ATCAAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAACAACCTTCCTCGGGTaGGTAATATGTATTTCTTTA +
Preference number: 5 (lower is better)
Translates to: IKSCWPTTFLGLVICISLTTFLG*VICISL
Trigger: TAAAGAAATACATATTACCAACCCGAGGAAGGTTGT...TAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412981.5
ENST00000452492.6
CDS-3UTR CAA 90 bp AAATCTTGTTGGCCAACAACCTTCCTCGGGTTGGTAATATGTATTTCTTTAATGTTATCTTGGAAGAATTaGTTCCAAAGACTCCCTTCA +
Preference number: 5 (lower is better)
Translates to: KSCWPTTFLGLVICISLMLSWKN*FQRLPS
Trigger: TGAAGGGAGTCTTTGGAACAAATTCTTCCAAGATAA...CATTAAAGAAATACATATTACCAACCCGAGGAAGGTTGTTGGCCAACAAGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452492.6
CDS GCA 72 bp CTCCTCCCCTCCTCTTTCTCTCTCTCTCCCTCAGTCTaGAGGGCGCTCGCGGAAGCGGCCGGGCCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: LLPSSFSLSPSV*RALAEAAGPGP
Trigger: CGGGCCGGGCCCGGCCGCTTCCGCGAGCGCCCTGCAGACTGAGGGAGAGAGAGAGAAAGAGGAGGGGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000412981.5
ENST00000415814.6
ENST00000423331.6
ENST00000425944.5
ENST00000428355.5
ENST00000430169.5
ENST00000443499.6
ENST00000444471.5
ENST00000444756.5
ENST00000445294.5
ENST00000452492.6
ENST00000471679.1
ENST00000481396.5
ENST00000485432.1
CDS CCA 72 bp CTTTTCCCAGAGGTGCTTCTGAGGGTGCGAAGAGGCTaGGCCTGGCCGGAGAAGGAGCCCCTGGCACTGCTC +
Preference number: 6 (lower is better)
Translates to: LFPEVLLRVRRG*AWPEKEPLALL
Trigger: GAGCAGTGCCAGGGGCTCCTTCTCCGGCCAGGCCCAGCCTCTTCGCACCCTCAGAAGCACCTCTGGGAAAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS CCA 72 bp CACCCACCTTTCAGGCATGGACGTTGGGGGCGGCGGTaGCTGTCGAGTGCGGGCCTGAAACCAAGAACGGCT +
Preference number: 6 (lower is better)
Translates to: HPPFRHGRWGRR*LSSAGLKPRTA
Trigger: AGCCGTTCTTGGTTTCAGGCCCGCACTCGACAGCCACCGCCGCCCCCAACGTCCATGCCTGAAAGGTGGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414318.2
CDS CAA 72 bp CAAATAGCAGCCGCACCCACCTTTCAGGCATGGACGTaGGGGGCGGCGGTGGCTGTCGAGTGCGGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: QIAAAPTFQAWT*GAAVAVECGPE
Trigger: TTCAGGCCCGCACTCGACAGCCACCGCCGCCCCCAACGTCCATGCCTGAAAGGTGGGTGCGGCTGCTATTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414318.2
CDS TCA 72 bp CCTGTGGCGCAGAAGGGCTCCCCAGCTCCTATTCCCTaGATCCTCCTCCTCCTCCCCTCCTCTTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: PVAQKGSPAPIP*ILLLLPSSFSL
Trigger: GAGAGAGAAAGAGGAGGGGAGGAGGAGGAGGATTCAGGGAATAGGAGCTGGGGAGCCCTTCTGCGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415814.6
ENST00000425944.5
ENST00000430169.5
ENST00000452492.6
CDS TCA 72 bp CCTGGGAGGCTGAGGCAGGAGAAGTGTTTGAAACCATaGGGGAGAGGTGGCAGTGAGCCGAGATCGAGCCAC +
Preference number: 6 (lower is better)
Translates to: PGRLRQEKCLKP*GRGGSEPRSSH
Trigger: GTGGCTCGATCTCGGCTCACTGCCACCTCTCCCTCATGGTTTCAAACACTTCTCCTGCCTCAGCCTCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS TCA 72 bp ACTGTGGCGCAGAAGGGCTCCCCAGCTCCTATTCCCTaGATCCTCCTCCTCCTCCCCTCCTCTTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: TVAQKGSPAPIP*ILLLLPSSFSL
Trigger: GAGAGAGAAAGAGGAGGGGAGGAGGAGGAGGATTCAGGGAATAGGAGCTGGGGAGCCCTTCTGCGCCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000412981.5
ENST00000414349.5
ENST00000423331.6
ENST00000428355.5
ENST00000443499.6
ENST00000444471.5
ENST00000444756.5
ENST00000445294.5
ENST00000446863.5
ENST00000471679.1
ENST00000481396.5
ENST00000485432.1
ENST00000497531.5
CDS GCA 72 bp ATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTTaGTCGCAGGCTCCCTCCTGTGGCGCAGAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: IPALVHSSFHLV*SQAPSCGAEGL
Trigger: GAGCCCTTCTGCGCCACAGGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415814.6
CDS GCA 72 bp TGTGGGAACTGGACAGCGTCACCAAAAGTAACTACCTaGGCGCTCCCTCCCGTGAGGGGTGGAAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: CGNWTASPKVTT*ALPPVRGGRQT
Trigger: TGTCTGCCTTCCACCCCTCACGGGAGGGAGCGCGCAGGTAGTTACTTTTGGTGACGCTGTCCAGTTCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000415814.6
ENST00000428355.5
ENST00000444471.5
ENST00000497531.5
CDS CCA 72 bp CGGGAGTGGTGGCGGGCGGCTATAATCCTGGCTACCTaGGAGGCTGAGGCAGGAGAAGTGTTTGAAACCATG +
Preference number: 6 (lower is better)
Translates to: REWWRAAIILAT*EAEAGEVFETM
Trigger: CATGGTTTCAAACACTTCTCCTGCCTCAGCCTCCCAGGTAGCCAGGATTATAGCCGCCCGCCACCACTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS CAA 72 bp CATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTaGCTCGCAGGCTCCCTCCTGTGGCGCAGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: HSSTCALQFPPR*LAGSLLWRRRA
Trigger: AGCCCTTCTGCGCCACAGGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415814.6
CDS CAA 72 bp CGTGAGGGGTGGAAGGCAGACAGCCCATTCCAGCACTaGTGCACTCCAGTTTCCACCTCGTTTGCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: REGWKADSPFQH*CTPVSTSFARR
Trigger: CCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATGGGCTGTCTGCCTTCCACCCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415814.6
ENST00000428355.5
ENST00000444471.5
ENST00000497531.5
CDS CAA 90 bp GCTGAGGTCCTGGTAGGAATTACAACAGAGGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCACCTGCACTGCCTGGAGCCATTGCT +
Preference number: 6 (lower is better)
Translates to: AEVLVGITTEEELLL*PPGTGPPALPGAIA
Trigger: AGCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTCCTCTGTTGTAATTCCTACCAGGACCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 72 bp CCTGGCCGCTGGAGCAGTAGTGGTTGTCCGCAATGGTaGTCTGTTCGTTCTCTTCGGCCTCTAGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: PGRWSSSGCPQW*SVRSLRPLAGS
Trigger: AGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCACCATTGCGGACAACCACTACTGCTCCAGCGGCCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS GCA 72 bp TCTGCAAACAAGGCATCCCAGACCACCAGAAGGTCCTaGAGGGGGAACTCTCGTCCAAATAGCAGCCGCACC +
Preference number: 6 (lower is better)
Translates to: SANKASQTTRRS*RGNSRPNSSRT
Trigger: GGTGCGGCTGCTATTTGGACGAGAGTTCCCCCTGCAGGACCTTCTGGTGGTCTGGGATGCCTTGTTTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 72 bp GGAGAAGTGTTTGAAACCATGAGGGAGAGGTGGCAGTaGGCCGAGATCGAGCCACTGCACCACTGCACTCCA +
Preference number: 6 (lower is better)
Translates to: GEVFETMRERWQ*AEIEPLHHCTP
Trigger: TGGAGTGCAGTGGTGCAGTGGCTCGATCTCGGCTCACTGCCACCTCTCCCTCATGGTTTCAAACACTTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS CAA 72 bp CTGGTAGGAATTACAACAGAGGAGGAGCTACTGCTGTaGCCTCCAGGTACAGGGCCACCTGCACTGCCTGGA +
Preference number: 6 (lower is better)
Translates to: LVGITTEEELLL*PPGTGPPALPG
Trigger: TCCAGGCAGTGCAGGTGGCCCTGTACCTGGAGGCAACAGCAGTAGCTCCTCCTCTGTTGTAATTCCTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS CAA 72 bp CATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTaGCTCGCAGGCTCCCTCACCAGGTTCTCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: HSSTCALQFPPR*LAGSLTRFSGL
Trigger: AAGACCTGAGAACCTGGTGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497531.5
CDS CAA 90 bp GCCTGGCCGGAGAAGGAGCCCCTGGCACTGCTCCCATCATCATCTTaGGAAATCAGGATGAAGTCATCGGAATTCCCTCTATCAGTGCAC +
Preference number: 6 (lower is better)
Translates to: AWPEKEPLALLPSSS*EIRMKSSEFPLSVH
Trigger: GTGCACTGATAGAGGGAATTCCGATGACTTCATCCTGATTTCCAAAGATGATGATGGGAGCAGTGCCAGGGGCTCCTTCTCCGGCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS TCA 72 bp GGAGGATGGTTTGAGACCTGGAGGTTGATGCTGCAGTaGGCCTTAATCACACCATGCACTCCAGTCTTGGCG +
Preference number: 6 (lower is better)
Translates to: GGWFETWRLMLQ*ALITPCTPVLA
Trigger: CGCCAAGACTGGAGTGCATGGTGTGATTAAGGCTCACTGCAGCATCAACCTCCAGGTCTCAAACCATCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480435.5
CDS GCA 72 bp ATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTTaGTCGCAGGCTCCCTCACCAGGTTCTCAGGTCTTT +
Preference number: 6 (lower is better)
Translates to: IPALVHSSFHLV*SQAPSPGSQVF
Trigger: AAAGACCTGAGAACCTGGTGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497531.5
CDS CAA 72 bp GCCGGAGCTGCGGCTGCCGCGGAAGTTAATTGCAACTaGACTTCAAGTTGTCCTCTTTCCCCATACGAAGTG +
Preference number: 6 (lower is better)
Translates to: AGAAAAAEVNCN*TSSCPLSPYEV
Trigger: CACTTCGTATGGGGAAAGAGGACAACTTGAAGTCAAGTTGCAATTAACTTCCGCGGCAGCCGCAGCTCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414318.2
CDS CAA 72 bp CATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTaGCTCGCAGGCTCCCTCAGATTTTCTTTCAGGCTT +
Preference number: 6 (lower is better)
Translates to: HSSTCALQFPPR*LAGSLRFSFRL
Trigger: AAGCCTGAAAGAAAATCTGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428355.5
CDS CAA 72 bp CATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTaGCTCGCAGGCTCCCTCCTTAATAGAGAATCTGGA +
Preference number: 6 (lower is better)
Translates to: HSSTCALQFPPR*LAGSLLNRESG
Trigger: TCCAGATTCTCTATTAAGGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444471.5
CDS TCA 72 bp ACATGGCTACGAAGATATAATCTACTAAACCCAGGCTaGGGCCGTCTGCAAACAAGGCATCCCAGACCACCA +
Preference number: 6 (lower is better)
Translates to: TWLRRYNLLNPG*GRLQTRHPRPP
Trigger: TGGTGGTCTGGGATGCCTTGTTTGCAGACGGCCTCAGCCTGGGTTTAGTAGATTATATCTTCGTAGCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS GCA 72 bp ATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTTaGTCGCAGGCTCCCTCAGATTTTCTTTCAGGCTTT +
Preference number: 6 (lower is better)
Translates to: IPALVHSSFHLV*SQAPSDFLSGF
Trigger: AAAGCCTGAAAGAAAATCTGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428355.5
CDS GCA 72 bp ATTCCAGCACTTGTGCACTCCAGTTTCCACCTCGTTTaGTCGCAGGCTCCCTCCTTAATAGAGAATCTGGAT +
Preference number: 6 (lower is better)
Translates to: IPALVHSSFHLV*SQAPSLIENLD
Trigger: ATCCAGATTCTCTATTAAGGAGGGAGCCTGCGAGCAAACGAGGTGGAAACTGGAGTGCACAAGTGCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444471.5
CDS CCA 72 bp AGGTACAGGGCCACCTGCACTGCCTGGAGCCATTGCTaGGGAAATCAACTTTCTTCCAAAATTAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: RYRATCTAWSHC*GNQLSSKINQA
Trigger: AGCCTGATTAATTTTGGAAGAAAGTTGATTTCCCCAGCAATGGCTCCAGGCAGTGCAGGTGGCCCTGTACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS CAA 72 bp GAGAAGGAGCCCCTGGCACTGCTCCCATCATCATCTTaGGAAATCAGGATGAAGTCATCGGAATTCCCTCTA +
Preference number: 6 (lower is better)
Translates to: EKEPLALLPSSS*EIRMKSSEFPL
Trigger: TAGAGGGAATTCCGATGACTTCATCCTGATTTCCAAAGATGATGATGGGAGCAGTGCCAGGGGCTCCTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS CCA 72 bp GATGAGTGTCCATCACCTTTGCACAGTATTTGCACATaGCATCCAGGTCATTCAACTGCCCTTGAAGGAAGG +
Preference number: 6 (lower is better)
Translates to: DECPSPLHSICT*HPGHSTALEGR
Trigger: CCTTCCTTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS CCA 72 bp GCAATGGTGATCTGTTCGTTCTCTTCGGCCTCTAGCTaGCTCTGGTTAAAACGCAGGGAACCTTTTAGAATG +
Preference number: 6 (lower is better)
Translates to: AMVICSFSSASS*LWLKRREPFRM
Trigger: CATTCTAAAAGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCACCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS TCA 72 bp GACTCACTGGCATGTAGAAAAGCTTGGTGGTCACAGTaGAGGACAAAGACTATAGGTGCTAACAGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: DSLACRKAWWSQ*RTKTIGANSSC
Trigger: GCACGAACTGTTAGCACCTATAGTCTTTGTCCTTCACTGTGACCACCAAGCTTTTCTACATGCCAGTGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS CCA 72 bp GTGATCTGTTCGTTCTCTTCGGCCTCTAGCTGGCTCTaGTTAAAACGCAGGGAACCTTTTAGAATGTCTTTG +
Preference number: 6 (lower is better)
Translates to: VICSFSSASSWL*LKRREPFRMSL
Trigger: CAAAGACATTCTAAAAGGTTCCCTGCGTTTTAACCAGAGCCAGCTAGAGGCCGAAGAGAACGAACAGATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS TCA 72 bp GGGGAGCACCTTTGGCATTGGTCCGGCTTTTATTCATaGGGTCTGCTCCTCGTGCTTTGTAATAATCTAAAT +
Preference number: 6 (lower is better)
Translates to: GEHLWHWSGFYS*GLLLVLCNNLN
Trigger: ATTTAGATTATTACAAAGCACGAGGAGCAGACCTCATGAATAAAAGCCGGACCAATGCCAAAGGTGCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 72 bp ACAGCGGAAATATGGCGAAAATCTTGGATCCTTAATTaGGCCTCTTGTGTCACAGTACCTCCAGACTTCAGC +
Preference number: 6 (lower is better)
Translates to: TAEIWRKSWILN*ASCVTVPPDFS
Trigger: GCTGAAGTCTGGAGGTACTGTGACACAAGAGGCTCAATTAAGGATCCAAGATTTTCGCCATATTTCCGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465884.1
CDS GCA 72 bp TACCAAGATGAGTGTCCATCACCTTTGCACAGTATTTaGACATGGCATCCAGGTCATTCAACTGCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: YQDECPSPLHSI*TWHPGHSTALE
Trigger: TTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS TCA 72 bp CTTTGGATCTCTAAGGAACAGAGCCTTAAGAATCAGTaGGTGTACATCCCCGATGAATGGGTAATGCATCAG +
Preference number: 6 (lower is better)
Translates to: LWISKEQSLKNQ*VYIPDEWVMHQ
Trigger: CTGATGCATTACCCATTCATCGGGGATGTACACTCACTGATTCTTAAGGCTCTGTTCCTTAGAGATCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 72 bp TTATTCAATTTGTGGGCTCCTGCTGCAGGTGGTCCCTaGGACAATATCATAGAAGATTTCTTGTGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: LFNLWAPAAGGP*DNIIEDFLWEN
Trigger: GTTCTCCCACAAGAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423331.6
ENST00000507877.5
CDS TCA 72 bp TTATTCAATTTGTGGGCTCCTGCTGCAGGTGGTCCCTaGGACAATATCATAGAAGATTTACCAGGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LFNLWAPAAGGP*DNIIEDLPGSQ
Trigger: CTGAGAACCTGGTAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444471.5
ENST00000480435.5
CDS GCA 72 bp TTACAAGATGAGTGTCCATCACCTTTGCACAGTATTTaGACATGGCATCCAGGTCATTCAACTGCCCTTGAA +
Preference number: 6 (lower is better)
Translates to: LQDECPSPLHSI*TWHPGHSTALE
Trigger: TTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS CCA 72 bp GTTGCATTTATTCAATTTGTGGGCTCCTGCTGCAGGTaGTCCCTGAGACAATATCATAGAAGATTTACCAGG +
Preference number: 6 (lower is better)
Translates to: VAFIQFVGSCCR*SLRQYHRRFTR
Trigger: CCTGGTAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAAATGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000444471.5
ENST00000480435.5
CDS GCA 72 bp TCAATTGTTTGCAAATTTGCTTCCAAAACTCAGGAATaGACTACTCAACTGAGGCCGCATTTGAGAGCACAC +
Preference number: 6 (lower is better)
Translates to: SIVCKFASKTQE*TTQLRPHLRAH
Trigger: GTGTGCTCTCAAATGCGGCCTCAGTTGAGTAGTGCATTCCTGAGTTTTGGAAGCAAATTTGCAAACAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253692.11
CDS CCA 72 bp GTTGCATTTATTCAATTTGTGGGCTCCTGCTGCAGGTaGTCCCTGAGACAATATCATAGAAGATTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: VAFIQFVGSCCR*SLRQYHRRFLV
Trigger: CACAAGAAATCTTCTATGATATTGTCTCAGGGACCACCTGCAGCAGGAGCCCACAAATTGAATAAATGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423331.6
ENST00000507877.5
CDS CAA 72 bp CCTCTTGTGTCACAGTACCTCCAGACTTCAGCTAGTTaGAGGCAAGATATTCTGAAGCTTGTAATCAAAAGC +
Preference number: 6 (lower is better)
Translates to: PLVSQYLQTSAS*RQDILKLVIKS
Trigger: GCTTTTGATTACAAGCTTCAGAATATCTTGCCTCAAACTAGCTGAAGTCTGGAGGTACTGTGACACAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465884.1
CDS TCA 72 bp TATTTGCACATGGCATCCAGGTCATTCAACTGCCCTTaGAGGAAGGAAATTTGGGCTTCTAATTCTTCTTCA +
Preference number: 6 (lower is better)
Translates to: YLHMASRSFNCP*RKEIWASNSSS
Trigger: TGAAGAAGAATTAGAAGCCCAAATTTCCTTCCTTCAAGGGCAGTTGAATGACCTGGATGCCATGTGCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000429924.6
ENST00000446818.6
CDS TCA 72 bp ATTCCAGAGCTCCAATTTTCAAGACTATTATTCCTATaGCAGGATGAGGACCCACTGCTTAGCTCCCAATTT +
Preference number: 6 (lower is better)
Translates to: IPELQFSRLLFL*QDEDPLLSSQF
Trigger: AAATTGGGAGCTAAGCAGTGGGTCCTCATCCTGTCATAGGAATAATAGTCTTGAAAATTGGAGCTCTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471679.1
CDS GCA 72 bp AGTAATTCACTTACCAAGATGAGTGTCCATCACCTTTaGACAGTATTTGCACATGGCATCCAGGTCATTCAA +
Preference number: 6 (lower is better)
Translates to: SNSLTKMSVHHL*TVFAHGIQVIQ
Trigger: TTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGGTAAGTGAATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429924.6
CDS CAA 90 bp TTAATTGAGCCTCTTGTGTCACAGTACCTCCAGACTTCAGCTAGTTaGAGGCAAGATATTCTGAAGCTTGTAATCAAAAGCATCCTCCAA +
Preference number: 6 (lower is better)
Translates to: LIEPLVSQYLQTSAS*RQDILKLVIKSILQ
Trigger: TTGGAGGATGCTTTTGATTACAAGCTTCAGAATATCTTGCCTCAAACTAGCTGAAGTCTGGAGGTACTGTGACACAAGAGGCTCAATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465884.1
CDS CAA 72 bp CATCTTGAATATTTACAAGATGAGTGTCCATCACCTTaGCACAGTATTTGCACATGGCATCCAGGTCATTCA +
Preference number: 6 (lower is better)
Translates to: HLEYLQDECPSP*HSICTWHPGHS
Trigger: TGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGTAAATATTCAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS GCA 72 bp ATCTTGAATATTTACAAGATGAGTGTCCATCACCTTTaGACAGTATTTGCACATGGCATCCAGGTCATTCAA +
Preference number: 6 (lower is better)
Translates to: ILNIYKMSVHHL*TVFAHGIQVIQ
Trigger: TTGAATGACCTGGATGCCATGTGCAAATACTGTGCAAAGGTGATGGACACTCATCTTGTAAATATTCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253692.11
ENST00000414318.2
ENST00000429383.8
ENST00000446818.6
CDS GCA 72 bp ATAATGGGATTCTCTTATGGGAAACAAAGTATTCAGTaGTTTCCGGATTTATGTGACCATGGGATCTTTACA +
Preference number: 6 (lower is better)
Translates to: IMGFSYGKQSIQ*FPDLCDHGIFT
Trigger: TGTAAAGATCCCATGGTCACATAAATCCGGAAAGCACTGAATACTTTGTTTCCCATAAGAGAATCCCATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000423331.6
ENST00000433533.5
ENST00000443386.5
ENST00000443499.6
ENST00000444471.5
ENST00000444756.5
ENST00000480435.5
ENST00000481396.5
ENST00000485432.1
ENST00000497531.5
CDS CCA 72 bp ACATATATATTTAGTTGTGTACTGTTTCTGAACGCATaGCTGTCTTTTTGGACACAGTTCTTCCGTAGATTT +
Preference number: 6 (lower is better)
Translates to: TYIFSCVLFLNA*LSFWTQFFRRF
Trigger: AAATCTACGGAAGAACTGTGTCCAAAAAGACAGCCATGCGTTCAGAAACAGTACACAACTAAATATATATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429924.6