RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D4 (Homo sapiens)

Ensembl gene IDs: ENSG00000136111

Ensembl transcript IDs: ENST00000377625.6, ENST00000377636.8, ENST00000413735.1, ENST00000431480.6, ENST00000478591.1, ENST00000488955.1, ENST00000493487.1, ENST00000648194.1

Found 876 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCAGAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTaGAGCCTGGTTCATAACAGGCCACAGACAGGTACCCAGGGACCC +
Preference number: 1 (lower is better)
Translates to: SELRQSCLLACPPLL*SLVHNRPQTGTQGP
Trigger: GGGTCCCTGGGTACCTGTCTGTGGCCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CCA 90 bp TCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTaGTTCATAACAGGCCACAGACAGGTACCCAGGGACCCCTGCAGT +
Preference number: 1 (lower is better)
Translates to: SGSHACSHAHHCCAA*FITGHRQVPRDPCS
Trigger: ACTGCAGGGGTCCCTGGGTACCTGTCTGTGGCCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR GCA 90 bp AGGAGTCAGAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTaGTGTGCAGCCTGGTTCATAACAGGCCACAGACAGGTACCCAGG +
Preference number: 1 (lower is better)
Translates to: RSQSSGSHACSHAHH*CAAWFITGHRQVPR
Trigger: CCTGGGTACCTGTCTGTGGCCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTCTGACTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CCA 90 bp TCAGCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAAGG +
Preference number: 1 (lower is better)
Translates to: SAPVLGGSISFRVQP*ASDMQALPLCSILR
Trigger: CCTTAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR TCA 90 bp GGAACCCTGACTGTTTTCCTGCAACTAGACGATCCCATCTGGGGATaGTGGGAGACAGTGACAGATCATCAGGCATTCGATTCTCTTAAG +
Preference number: 1 (lower is better)
Translates to: GTLTVFLQLDDPIWG*WETVTDHQAFDSLK
Trigger: CTTAAGAGAATCGAATGCCTGATGATCTGTCACTGTCTCCCATCATCCCCAGATGGGATCGTCTAGTTGCAGGAAAACAGTCAGGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CCA 90 bp ACTGAATTTAAGGTAGAGAGACCTAAATTACAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCCTTGTCATTTGGTGACTGTGGCACC +
Preference number: 1 (lower is better)
Translates to: TEFKVERPKLQALTI*WESGKSLSFGDCGT
Trigger: GGTGCCACAGTCACCAAATGACAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGTAATTTAGGTCTCTCTACCTTAAATTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR TCA 90 bp ACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTaGAAATTACTTTCCTTGCCTATACCCAGCATGCGTGAATGTCAT +
Preference number: 1 (lower is better)
Translates to: TIIESSLKKRTANVL*KLLSLPIPSMRECH
Trigger: ATGACATTCACGCATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTCTTGGGCCAGCGACATaGAGGCTCTTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVLGPAT*RLFLSV
Trigger: TACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAG...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTCCCCAACAGATTCCTTaGCTACCATCGGTGCATCAC +
Preference number: 2 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVPQQIP*LPSVHH
Trigger: GTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGG...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTCAGGCAGTCATGCTTaGTCGCATGCCCACCACTGC +
Preference number: 2 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGSGSHA*SHAHHC
Trigger: GCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTTTCCACAGACTGGTaGCAGGGGATGGTTTCAGGA +
Preference number: 2 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLSTDW*QGMVSG
Trigger: TCCTGAAACCATCCCCTGCCACCAGTCTGTGGAAAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CAA 90 bp GGGTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTaGACACCAGGGACTGGTTTCATGGAAGACAATCTTTCCACAGAC +
Preference number: 2 (lower is better)
Translates to: GFHHADLVKQRSSTF*TPGTGFMEDNLSTD
Trigger: GTCTGTGGAAAGATTGTCTTCCATGAAACCAGTCCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCT +
Preference number: 2 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVFRVQP*ASDMQA
Trigger: AGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAGCACCAGTATTAGGTaGTTCCATCAGCTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSTSIR*FHQLQG
Trigger: ACCCTGAAGCTGATGGAACCACCTAATACTGGTGCT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGAATCTTTCCACAGACTaGTGGCAGGGGATGGTTTCA +
Preference number: 2 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRNLSTD*WQGMVS
Trigger: TGAAACCATCCCCTGCCACCAGTCTGTGGAAAGATT...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: KENCKCTLKITFLAYTQHEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGATCCCATCTGGGGATaGTGGGAGACAGTGACAGAT +
Preference number: 2 (lower is better)
Translates to: QTILQPPISSNICLSYSPDPIWG*WETVTD
Trigger: ATCTGTCACTGTCTCCCATCATCCCCAGATGGGATC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 2 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCCACCTTTTCACCATTaGGTGAAACATGCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGPPFHH*VKHAVL
Trigger: AAGAACAGCATGTTTCACTCAATGGTGAAAAGGTGG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 2 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGTATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 2 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCTTGGGCCAGCGACATaGAGGCTCTTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLGPAT*RLFLSV
Trigger: TACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCT +
Preference number: 2 (lower is better)
Translates to: KENCKCTLKITFLAYTQHFRVQP*ASDMQA
Trigger: AGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCT +
Preference number: 2 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTFRVQP*ASDMQA
Trigger: AGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGCTTTTCACCATTGAGTaGAACATGCTGTTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRLFTIE*NMLFFG
Trigger: TCCAAAGAACAGCATGTTTCACTCAATGGTGAAAAG...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 2 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCTTGGGCCAGCGACATaGAGGCTCTTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLGPAT*RLFLSV
Trigger: TACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCTTGGGCCAGCGACATaGAGGCTCTTCCTCTCTGTA +
Preference number: 2 (lower is better)
Translates to: MFVICSSKLSETPRALLFLGPAT*RLFLSV
Trigger: TACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 2 (lower is better)
Translates to: THWVTVRRGFQMFVICSSNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 2 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 2 (lower is better)
Translates to: QTILQPPISSNICLSYSPALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTCCACCTTTTCACCATTaGGTGAAACATGCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: QTILQPPISSNICLSYSPPPFHH*VKHAVL
Trigger: AAGAACAGCATGTTTCACTCAATGGTGAAAAGGTGG...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: QTILQPPISSNICLSYSPKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGCACCAGTATTAGGTaGTTCCATCAGCTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSTSIR*FHQLQG
Trigger: ACCCTGAAGCTGATGGAACCACCTAATACTGGTGCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 2 (lower is better)
Translates to: SGNPSNKSISSPQLNGADNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 2 (lower is better)
Translates to: HSILLRNTKHRSPACTVHQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: HSILLRNTKHRSPACTVHERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 2 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACTTTTCACCATTGAGTaGAACATGCTGTTCTTTGGA +
Preference number: 2 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVLFTIE*NMLFFG
Trigger: TCCAAAGAACAGCATGTTTCACTCAATGGTGAAAAG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 2 (lower is better)
Translates to: QRHYHRIISEKENCKCTLYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 2 (lower is better)
Translates to: MFVICSSKLSETPRALLFERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 2 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 2 (lower is better)
Translates to: MFVICSSKLSETPRALLFSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 2 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACCACCTTTTCACCATTaGGTGAAACATGCTGTTCTT +
Preference number: 2 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTPPFHH*VKHAVL
Trigger: AAGAACAGCATGTTTCACTCAATGGTGAAAAGGTGG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 2 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: MFVICSSKLSETPRALLFHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 2 (lower is better)
Translates to: MFVICSSKLSETPRALLFNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTGCAATATACAAAGATaGTCTGGCTTTGTTTCACTA +
Preference number: 2 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYCNIQR*SGFVSL
Trigger: TAGTGAAACAAAGCCAGAGCATCTTTGTATATTGCA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 2 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 2 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR CCA 72 bp CATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTaGTTCATAACAGGCCACAGACAGGTACCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: HACSHAHHCCAA*FITGHRQVPRD
Trigger: GTCCCTGGGTACCTGTCTGTGGCCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR GCA 72 bp AGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTaGAGCCTGGTTCATAACAGGCCACAGACAGGTACC +
Preference number: 3 (lower is better)
Translates to: RQSCLLACPPLL*SLVHNRPQTGT
Trigger: GGTACCTGTCTGTGGCCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR GCA 72 bp CAGGAGTCAGAGCTCAGGCAGTCATGCTTGCTCGCATaGCCACCACTGCTGTGCAGCCTGGTTCATAACAGG +
Preference number: 3 (lower is better)
Translates to: QESELRQSCLLA*PPLLCSLVHNR
Trigger: CCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTCTGACTCCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CCA 72 bp GTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: VLGGSISFRVQP*ASDMQALPLCS
Trigger: ACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 3 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 3 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR TCA 72 bp TTGCGCTCCTATGAGAATCTAATGCCGTGGCTGATCTaGCAGGAGTCAGAGCTCAGGCAGTCATGCTTGCTC +
Preference number: 3 (lower is better)
Translates to: LRSYENLMPWLI*QESELRQSCLL
Trigger: GAGCAAGCATGACTGCCTGAGCTCTGACTCCTGTCAGATCAGCCACGGCATTAGATTCTCATAGGAGCGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 3 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 3 (lower is better)
Translates to: MFVICSSKLSETPRALLFLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 3 (lower is better)
Translates to: THWVTVRRGFQMFVICSSTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 3 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 3 (lower is better)
Translates to: THWVTVRRGFQMFVICSSTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 3 (lower is better)
Translates to: SGNPSNKSISSPQLNGADANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 3 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 3 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGGGGGTTTCAGATGTTaGTCATCTGTTCATCAAAGC +
Preference number: 3 (lower is better)
Translates to: SGNPSNKSISSPQLNGADGGFRC*SSVHQS
Trigger: GCTTTGATGAACAGATGACAAACATCTGAAACCCCC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR GCA 72 bp AAAGTAATGCCTAACCAGACTCATAATGCATGTAGATaGAACATGCTAGTTGGCACAAAGCAGGCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: KVMPNQTHNACR*NMLVGTKQAGR
Trigger: TCTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCATCTACATGCATTATGAGTCTGGTTAGGCATTACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 3 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: HSILLRNTKHRSPACTVHESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CCA 72 bp AAAAGGTTTCTTTCCGAACTTCCCCAACAGATTCCTTaGCTACCATCGGTGCATCACACCCATAAAGTAATT +
Preference number: 3 (lower is better)
Translates to: KRFLSELPQQIP*LPSVHHTHKVI
Trigger: AATTACTTTATGGGTGTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGGAAGTTCGGAAAGAAACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR CCA 72 bp TGGAAGACAATCTTTCCACAGACTGGTGGCAGGGGATaGTTTCAGGATGATTCAATGATTCAAGCACATTTA +
Preference number: 3 (lower is better)
Translates to: WKTIFPQTGGRG*FQDDSMIQAHL
Trigger: TAAATGTGCTTGAATCATTGAATCATCCTGAAACCATCCCCTGCCACCAGTCTGTGGAAAGATTGTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 3 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR CCA 72 bp AAGGTAGAGAGACCTAAATTACAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCCTTGTCATTTGGTGAC +
Preference number: 3 (lower is better)
Translates to: KVERPKLQALTI*WESGKSLSFGD
Trigger: GTCACCAAATGACAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGTAATTTAGGTCTCTCTACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 3 (lower is better)
Translates to: KENCKCTLKITFLAYTQHTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 3 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR TCA 72 bp AATTTGGTGGGAAAGTGGCAAATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAGAGGAATTCATTCACA +
Preference number: 3 (lower is better)
Translates to: NLVGKWQILVIW*LWHQIKRNSFT
Trigger: TGTGAATGAATTCCTCTTTATTTGGTGCCACAGTCACCAAATGACAAGGATTTGCCACTTTCCCACCAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCCACCTTTTCACCATaGAGTGAAACATGCTGTTCT +
Preference number: 3 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSTFSP*SETCCS
Trigger: AGAACAGCATGTTTCACTCAATGGTGAAAAGGTGGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 3 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGGGGGTTTCAGATGTTaGTCATCTGTTCATCAAAGC +
Preference number: 3 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTGGFRC*SSVHQS
Trigger: GCTTTGATGAACAGATGACAAACATCTGAAACCCCC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR TCA 72 bp AGACTGGTGGCAGGGGATGGTTTCAGGATGATTCAATaGTTCAAGCACATTTATTGTGCACTTTATTTCTAT +
Preference number: 3 (lower is better)
Translates to: RLVAGDGFRMIQ*FKHIYCALYFY
Trigger: ATAGAAATAAAGTGCACAATAAATGTGCTTGAATCATTGAATCATCCTGAAACCATCCCCTGCCACCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTACGTGGCAGGCCATCTaGGACTCGGGGTCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVTWQAI*DSGSSG
Trigger: GCCCGACGACCCCGAGTCGCAGATGGCCTGCCACGT...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGGGCATCCTCCTCCTTaGGCTGGCGCCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDGHPPP*AGASGR
Trigger: CCTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCCCGCCTCGGGCTTCTaGCTGCGCCTGCGGATCTCG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDPASGF*LRLRIS
Trigger: CGAGATCCGCAGGCGCAGCCAGAAGCCCGAGGCGGG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTCTGGTCAGGGCAGGCTaGCTGGCCCCGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVLVRAG*LAPAGK
Trigger: CTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAG...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTCAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVQGGCR*RQPPPA
Trigger: TGCCGGAGGAGGCTGACGGCACCGACACCCACCTTG...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDSVARR*HCCTET
Trigger: GGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDQGGCR*RQPPPA
Trigger: TGCCGGAGGAGGCTGACGGCACCGACACCCACCTTG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGAACCGCTTATCGCTTaGCTTCCCGGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDEPLIA*LPGAGL
Trigger: CAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACCCGCCTCGGGCTTCTaGCTGCGCCTGCGGATCTCG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILPASGF*LRLRIS
Trigger: CGAGATCCGCAGGCGCAGCCAGAAGCCCGAGGCGGG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCCTGGCTGGGGTCTGTaGCGCGGAAAACGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDPGWGL*RGKRGR
Trigger: CCTGCCACGTTTTCCGCGCCACAGACCCCAGCCAGG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDRAGRD*VRSRVS
Trigger: GGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACGAAACTGTGCCAACTaGCGCACCGGGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILRNCAN*RTGLPR
Trigger: GCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTCG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAACGTGGCAGGCCATCTaGGACTCGGGGTCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILTWQAI*DSGSSG
Trigger: GCCCGACGACCCCGAGTCGCAGATGGCCTGCCACGT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTGTCTCCGTCGCGGCTaGGATTTCTGGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDCLRRG*DFWLPS
Trigger: CGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGGGCAGCCGCCGTACTaGAGGCCTGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDGQPPY*RPVSES
Trigger: TGACTCTGAAACAGGCCTTCAGTACGGCGGCTGCCC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILLDVTG*ARVSPS
Trigger: CGACGGAGACACGCGAGCGCACCCAGTCACGTCCAG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVARLRN*GESESS
Trigger: AGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCGAGGGCGGGTTAAATaGGCATCCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDRGRVK*ASSSLG
Trigger: GCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATCAGGGCAGGCTGGCTaGCCCCGGCAGGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILSGQAG*PRQVSQ
Trigger: TTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGTGCTTGAAGGTGGGTaGCTGAACGTGTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVVLEGG*LNVCAR
Trigger: ACGGGCACACACGTTCAGCCACCCACCTTCAAGCAC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTCTGGCTGCCCTCGTaGACTCTCCGTTGCACGCCG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILFWLPS*TLRCTP
Trigger: CGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTTGAAGGTGGGTGGCTaGACGTGTGTGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDLKVGG*TCVPVF
Trigger: GAAGACGGGCACACACGTTCAGCCACCCACCTTCAA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTTGCCCACCACTGCTGTaGAGCCTGGTTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVCPPLL*SLVHNR
Trigger: CCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCA...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTCATGCTTGCTCGCATaGCCACCACTGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDSCLLA*PPLLCS
Trigger: GCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGAGGGGGCCTTCTTGTaGGTCACGGTCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDEGAFL*VTVTFP
Trigger: TGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILPRCSP*IFRRCC
Trigger: ACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTTCCCGGGGCCGGGCTaGGCTGAGACGCCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADFPGPG*AETPGS
Trigger: CGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACGTCGGGCTGCGCCTTaGTCAGGTAGGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILRRAAP*SGRQSR
Trigger: CCTACTTTGCCTACCTGATCAAGGCGCAGCCCGACG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGGGCAGCCGCCGTACTaGAGGCCTGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILGQPPY*RPVSES
Trigger: TGACTCTGAAACAGGCCTTCAGTACGGCGGCTGCCC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGCAACAGGTCACAATTaGCTAGAGCATCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDATGHN*LEHPRA
Trigger: TGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGCTGGGATTTCTGGCTaGCCTCGTGAACTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDAGISG*PRELSV
Trigger: AACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACTGAGGAAAATGCGCTaGCGCCAGGAGATCCGGCGA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILLRKMR*RQEIRR
Trigger: TCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGATCAGGAAGCCAGCTaGAAACTGGAGGTGGTCACG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDDQEAS*KLEVVT
Trigger: CGTGACCACCTCCAGTTTCCAGCTGGCTTCCTGATC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTTCCCGGGGCCGGGCTaGGCTGAGACGCCCGGCTCG +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPFPGPG*AETPGS
Trigger: CGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAGCTTATGCAAAGAGTaGATCGGGCAGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDSLCKE*IGQASH
Trigger: GTGTGAGGCCTGCCCGATGCACTCTTTGCATAAGCT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDCTCVF*LASHSC
Trigger: GCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCCCGCCTCGGGCTTCTaGCTGCGCCTGCGGATCTCG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLPASGF*LRLRIS
Trigger: CGAGATCCGCAGGCGCAGCCAGAAGCCCGAGGCGGG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACATCAGGAACCTGGCTaGGGTCTGTGGCGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILHQEPG*GLWRGK
Trigger: TTTTCCGCGCCACAGACCCCAGCCAGGTTCCTGATG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAATAACATCAGGAACCTaGCTGGGGTCTGTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILITSGT*LGSVAR
Trigger: CCGCGCCACAGACCCCAGCCAGGTTCCTGATGTTAT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTGGTCAGGGCAGGCTaGCTGGCCCCGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLVRAG*LAPAGK
Trigger: CTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDAKSRL*RLPADK
Trigger: TTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGTGCTTGAAGGTGGGTaGCTGAACGTGTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILVLEGG*LNVCAR
Trigger: ACGGGCACACACGTTCAGCCACCCACCTTCAAGCAC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCCCCAACAGATTCCTTaGCTACCATCGGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDPQQIP*LPSVHH
Trigger: GTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCAGGAAGGGCGCGCTaGGCACCAGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRAGRAR*APGSPL
Trigger: GAGAGGTGATCCTGGTGCTCAGCGCGCCCTTCCTGC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACCTCCGTCGCGGGTTTaGAGGGTCAGAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSPPSRV*RVRGPR
Trigger: GCGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAGCAGCCCTGCCCCATaGAGCACTTCCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSSPAP*STSTGA
Trigger: CGCGCCCGTGGAAGTGCTGCATGGGGCAGGGCTGCT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCGCCGCCGAAACTGTaGCAACTGCCGCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLAPPKL*QLPHRA
Trigger: AGCCCGGTGCGGCAGTTGGCACAGTTTCGGCGGCGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACATATGCTGCGCCTTGTaGTCGAAGATGAATACCGCC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDICCAL*SKMNTA
Trigger: GGCGGTATTCATCTTCGAGCACAAGGCGCAGCATAT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDRDRNS*CSSKPE
Trigger: TTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLDVTG*ARVSPS
Trigger: CGACGGAGACACGCGAGCGCACCCAGTCACGTCCAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTTCACACAGTTTAATCTaGGTCTTGGCACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVSHSLI*VLALCR
Trigger: CCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGA...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGAACCGCTTATCGCTTaGCTTCCCGGGGCCGGGCTG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSEPLIA*LPGAGL
Trigger: CAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTCAGGGCAGGCTGGCTaGCCCCGGCAGGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGSGQAG*PRQVSQ
Trigger: TTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGTCAGGGCAGGCTGGCTaGCCCCGGCAGGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRSGQAG*PRQVSQ
Trigger: TTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGA...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCTGGTCAGGGCAGGCTaGCTGGCCCCGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLVRAG*LAPAGK
Trigger: CTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCAGCTTGGCTCTTGGTaGGTAGAGACCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDQLGSW*VETFNP
Trigger: AGGATTGAAGGTCTCTACCCACCAAGAGCCAAGCTG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGGGAACGGCTCATCCTaGATGCAGCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLGNGSS*MQLGGS
Trigger: GGAGCCGCCCAGCTGCATTCAGGATGAGCCGTTCCC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGCTGTTCGTGCAGGCTaGACTTCTCCATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILAVRAG*TSPCSH
Trigger: ATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSVARR*HCCTET
Trigger: GGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTTAGTAGCCCCCAATTaGATGGGGCAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDLVAPN*MGQTES
Trigger: TGATTCTGTCTGCCCCATTCAATTGGGGGCTACTAA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACGAAACTGTGCCAACTaGCGCACCGGGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKRNCAN*RTGLPR
Trigger: GCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTCG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAACGTGGCAGGCCATCTaGGACTCGGGGTCGTCGGGC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKTWQAI*DSGSSG
Trigger: GCCCGACGACCCCGAGTCGCAGATGGCCTGCCACGT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLDVTG*ARVSPS
Trigger: CGACGGAGACACGCGAGCGCACCCAGTCACGTCCAG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTATCTTTGCTGGGTTTaGCATCCTCTTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDYLCWV*HPLSWP
Trigger: CGGCCATGAAAGAGGATGCCAAACCCAGCAAAGATA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAGCCAGGTCCTCTCCTaGGTCCGGACCGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSQVLS*VRTALL
Trigger: GAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACTGGTCAGGGCAGGCTaGCTGGCCCCGGCAGGTAAG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKLVRAG*LAPAGK
Trigger: CTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLRAGRD*VRSRVS
Trigger: GGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILAKSRL*RLPADK
Trigger: TTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTTTTCAGTTGGCTATTaGCCCTCTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDFSVGY*PSPASP
Trigger: TGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACCCCAACAGATTCCTTaGCTACCATCGGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILPQQIP*LPSVHH
Trigger: GTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAATCTTTCCACAGACTaGTGGCAGGGGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDNLSTD*WQGMVS
Trigger: TGAAACCATCCCCTGCCACCAGTCTGTGGAAAGATT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGGGAACGGCTCATCCTaGATGCAGCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKGNGSS*MQLGGS
Trigger: GGAGCCGCCCAGCTGCATTCAGGATGAGCCGTTCCC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACGTCGGGCTGCGCCTTaGTCAGGTAGGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSRRAAP*SGRQSR
Trigger: CCTACTTTGCCTACCTGATCAAGGCGCAGCCCGACG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSVARR*HCCTET
Trigger: GGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPSEGWT*LGALAC
Trigger: ACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRKRLPS*GRWGRW
Trigger: CCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTT...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGKRLPS*GRWGRW
Trigger: CCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTT...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTGGGAGAAGCAACCCTaGGGAAAATGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGWEKQP*GKCAAA
Trigger: GGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGGTCACGAAGAGCAATaGTTTTGCCAAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDGHEEQ*FCQTGV
Trigger: TACACCAGTTTGGCAAAATCATTGCTCTTCGTGACC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCCTCCGTCGCGGGTTTaGAGGGTCAGAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADPPSRV*RVRGPR
Trigger: GCGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTCGAAACTGTGCCAACTaGCGCACCGGGCTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPRNCAN*RTGLPR
Trigger: GCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTCG...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR GCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGCGCCGCCGAAACTGTaGCAACTGCCGCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPAPPKL*QLPHRA
Trigger: AGCCCGGTGCGGCAGTTGGCACAGTTTCGGCGGCGC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGGGTCCGGACCGCGCTaGTCCCCTTGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADGSGPR*SPWIFR
Trigger: CCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLDVTG*ARVSPS
Trigger: CGACGGAGACACGCGAGCGCACCCAGTCACGTCCAG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACTGAGGAAAATGCGCTaGCGCCAGGAGATCCGGCGA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSLRKMR*RQEIRR
Trigger: TCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTTACTCTCCTTGTACATaGGTCGAACTGACGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVYSPCT*VELTKD
Trigger: ATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTA...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACGAGGGCGGGTTAAATaGGCATCCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSRGRVK*ASSSLG
Trigger: GCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCAGGTAAGCCAAGGTaGGTGTCGGTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLAGKPR*VSVPSA
Trigger: GGCTGACGGCACCGACACCCACCTTGGCTTACCTGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCTGAAGCAAGACTGTTaGACCGTTCAAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDLKQDC*TVQNCP
Trigger: TGGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGGACGGTGGGGACGCTaGCGGTGTCCCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPGRWGR*RCPWWR
Trigger: TCTCCACCAGGGACACCGCCAGCGTCCCCACCGTCC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSFRVQP*ASDMQA
Trigger: AGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACCATGCAGTCATCGATaGGGCTTGAGGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSPCSHR*GLRGPS
Trigger: AGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAGCCGAGGTCATACATaGGGAATTTCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDSRGHT*GISAFQ
Trigger: TTGAAATGCTGAAATTCCTCATGTATGACCTCGGCT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCCACCTTTTCACCATTaGGTGAAACATGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDPPFHH*VKHAVL
Trigger: AAGAACAGCATGTTTCACTCAATGGTGAAAAGGTGG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTAGTAGCCCCCAATTaGATGGGGCAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILLVAPN*MGQTES
Trigger: TGATTCTGTCTGCCCCATTCAATTGGGGGCTACTAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATGCGTCTTGGCACTCTaGAGGGCAGCCGCCGTACTG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKCVLAL*RAAAVL
Trigger: CAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGTGGCTGAACGTGTGTaGCCGTCTTCGAAACTGCGG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSVAERV*PSSKLR
Trigger: CCGCAGTTTCGAAGACGGGCACACACGTTCAGCCAC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAGCATTTCAAAGGCTTaGTCTTCACTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDSISKA*SSLMCR
Trigger: TCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTGGCCCAGGCTAGAGTaGAGTGGCATGATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGWPRLE*SGMMAH
Trigger: GTGAGCCATCATGCCACTGCACTCTAGCCTGGGCCA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACATCAGGAACCTGGCTaGGGTCTGTGGCGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSHQEPG*GLWRGK
Trigger: TTTTCCGCGCCACAGACCCCAGCCAGGTTCCTGATG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGAGGGGGCCTTCTTGTaGGTCACGGTCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTREGAFL*VTVTFP
Trigger: TGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGAGGGGGCCTTCTTGTaGGTCACGGTCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSEGAFL*VTVTFP
Trigger: TGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGGAGGGGGCCTTCTTGTaGGTCACGGTCACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGEGAFL*VTVTFP
Trigger: TGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTC...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATGTCTCCGTCGCGGCTaGGATTTCTGGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKCLRRG*DFWLPS
Trigger: CGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTTTCAGTTGGCTATTaGCCCTCTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILFSVGY*PSPASP
Trigger: TGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATCATTATATACACACTaGGTAACAGTGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILSLYTH*VTVRRG
Trigger: CCCCCTCCGCACTGTTACCCAGTGTGTATATAATGA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCCATGCAGTCATCGATaGGGCTTGAGGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLPCSHR*GLRGPS
Trigger: AGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGT +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSEGWT*LGALAC
Trigger: ACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATCTGTTAGCTCCCCTTaGGAAGATATTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILSVSSP*EDIFQG
Trigger: TCCCTGGAAAATATCTTCTCAAGGGGAGCTAACAGA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKKRLPS*GRWGRW
Trigger: CCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATGGGAGAAGCAACCCTaGGGAAAATGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKWEKQP*GKCAAA
Trigger: GGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACATTAAGACCTCTTTCTaGCATGCACCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDIKTSF*HAPTSS
Trigger: TGAAGAAGTTGGTGCATGTCAGAAAGAGGTCTTAAT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTCCAGCCACAAAGCTaGTCCCCTGACAGTATCCCA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLQPQS*SPDSIP
Trigger: TGGGATACTGTCAGGGGATCAGCTTTGTGGCTGGAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCATAAAGACTGGGGCTaGTTTCATTTTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDHKDWG*FHFLQG
Trigger: ACCTTGAAGAAAATGAAATCAGCCCCAGTCTTTATG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCTTTTCACCATTGAGTaGAACATGCTGTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDLFTIE*NMLFFG
Trigger: TCCAAAGAACAGCATGTTTCACTCAATGGTGAAAAG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGATTCAAGGGCACACTaGGCTATAACAAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDDSRAH*AITSHY
Trigger: ATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGCAGCCCTGCCCCATaGAGCACTTCCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSSPAP*STSTGA
Trigger: CGCGCCCGTGGAAGTGCTGCATGGGGCAGGGCTGCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSRRCCS*RLNFSM
Trigger: CATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGTGGATCTTCAGGCGCTaGTGTTCGTGCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRWIFRR*CSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCA...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGGGTCCGGACCGCGCTaGTCCCCTTGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHGSGPR*SPWIFR
Trigger: CCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGCTGGGATTTCTGGCTaGCCTCGTGAACTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSAGISG*PRELSV
Trigger: AACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTGGCTTCACACAGCTaGCTCAGGTGTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILLASHS*LRCKIT
Trigger: TGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTGGCCCAGGCTAGAGTaGAGTGGCATGATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLWPRLE*SGMMAH
Trigger: GTGAGCCATCATGCCACTGCACTCTAGCCTGGGCCA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCCTCCTCCTTGGGCTaGCGCCTCGGGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSSSLG*RLGQDL
Trigger: GAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGCACTGCACTGTTCACTaGAGCTCTGCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRHCTVH*SSASAE
Trigger: CTCTGCTGAGGCAGAGCTCCAGTGAACAGTGCAGTG...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGGGAACGGCTCATCCTaGATGCAGCTGGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYGNGSS*MQLGGS
Trigger: GGAGCCGCCCAGCTGCATTCAGGATGAGCCGTTCCC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGCAGGAAGGGCGCGCTaGGCACCAGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVAGRAR*APGSPL
Trigger: GAGAGGTGATCCTGGTGCTCAGCGCGCCCTTCCTGC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACGTGGCTGTTGTGGATaGAGCGCGAGATATGCTGCG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKRGCCG*SARYAA
Trigger: CGCAGCATATCTCGCGCTTCATCCACAACAGCCACG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCCATGCAGTCATCGATaGGGCTTGAGGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADPCSHR*GLRGPS
Trigger: AGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSVARR*HCCTET
Trigger: GGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACTTCTGGCTGCCCTCGTaGACTCTCCGTTGCACGCCG +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHFWLPS*TLRCTP
Trigger: CGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAA...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSEGWT*LGALAC
Trigger: ACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGCCTGGATTTTAGTATaGGCTACCTGTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: APVLGGSISFRVQPWASDAWILV*ATCNFS
Trigger: AGAAAAATTACAGGTAGCTCATACTAAAATCCAGGC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCAACAGGTCACAATTaGCTAGAGCATCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLATGHN*LEHPRA
Trigger: TGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGATCCCATCTGGGGATaGTGGGAGACAGTGACAGAT +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRDPIWG*WETVTD
Trigger: ATCTGTCACTGTCTCCCATCATCCCCAGATGGGATC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGGATCCCATCTGGGGATaGTGGGAGACAGTGACAGAT +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGDPIWG*WETVTD
Trigger: ATCTGTCACTGTCTCCCATCATCCCCAGATGGGATC...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGGGATGGTTTCAGGATaGTTCAATGATTCAAGCACA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILGMVSG*FNDSST
Trigger: TGTGCTTGAATCATTGAATCATCCTGAAACCATCCC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGACCGCCGGGTTGGGCTaGGTGGCCGACGGACTAGTG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLTAGLG*VADGLV
Trigger: CACTAGTCCGTCGGCCACGCAGCCCAACCCGGCGGT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTGGATCTTCAGGCGCTaGTGTTCGTGCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLWIFRR*CSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGGGTCCGGACCGCGCTaGTCCCCTTGGATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVGSGPR*SPWIFR
Trigger: CCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVQGGCR*RQPPPA
Trigger: TGCCGGAGGAGGCTGACGGCACCGACACCCACCTTG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSCTCVF*LASHSC
Trigger: GCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTTCGGGAAACGTTTaGCAAGCTGAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSSGNV*QAEDGG
Trigger: CCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADARLRN*GESESS
Trigger: AGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGACCTCTTTCTGACATaGACCAACTTCTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILDLFLT*TNFFIV
Trigger: GACTATGAAGAAGTTGGTGCATGTCAGAAAGAGGTC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAAGCATTTCAAAGGCTTaGTCTTCACTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILSISKA*SSLMCR
Trigger: TCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACAGGTCTGTACTGCTTaGGGAAGCCGAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSQVCTA*GSRGHT
Trigger: TGTATGACCTCGGCTTCCGCAAGCAGTACAGACCTG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAATGTCAGGTCTGTACTaGTTGCGGAAGCCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSMSGLY*LRKPRS
Trigger: TGACCTCGGCTTCCGCAAGCAGTACAGACCTGACAT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGGGCATCCTCCTCCTTaGGCTGGCGCCTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHGHPPP*AGASGR
Trigger: CCTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCATCAGGAACCTGGCTaGGGTCTGTGGCGCGGAAAA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADHQEPG*GLWRGK
Trigger: TTTTCCGCGCCACAGACCCCAGCCAGGTTCCTGATG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACATAACATCAGGAACCTaGCTGGGGTCTGTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADITSGT*LGSVAR
Trigger: CCGCGCCACAGACCCCAGCCAGGTTCCTGATGTTAT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAGCCAGGTCCTCTCCTaGGTCCGGACCGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSQVLS*VRTALL
Trigger: GAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGCCAGGTCCTCTCCTaGGTCCGGACCGCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSQVLS*VRTALL
Trigger: GAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGCAGACCCGAGAGCTaGTCAGGGCAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSRPES*SGQAGW
Trigger: CCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVRAGRD*VRSRVS
Trigger: GGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTCCTGGTCACTGACTaGCTTCATTTTCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILFLVTD*LHFLNS
Trigger: AGAGTTCAGAAAATGAAGCCAGTCAGTGACCAGGAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGGACGGTGGGGACGCTaGCGGTGTCCCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFGRWGR*RCPWWR
Trigger: TCTCCACCAGGGACACCGCCAGCGTCCCCACCGTCC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGTGCTTGAAGGTGGGTaGCTGAACGTGTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADVLEGG*LNVCAR
Trigger: ACGGGCACACACGTTCAGCCACCCACCTTCAAGCAC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTGCTGCACTGTTCACTaGAGCTCTGCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLCCTVH*SSASAE
Trigger: CTCTGCTGAGGCAGAGCTCCAGTGAACAGTGCAGCA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTTCTGGCTGCCCTCGTaGACTCTCCGTTGCACGCCG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYFWLPS*TLRCTP
Trigger: CGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSEGWT*LGALAC
Trigger: ACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACTTTCTCTTTGTGCTTaGAGGTGGGTGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSLSLCA*RWVAER
Trigger: ACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACAGATCCGGCGAGGAGTaGCAGAGGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHRSGEE*QRFLPH
Trigger: GTGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCT...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACATGCTGCTGAGCAGTaGGCTGCTTCAAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSHAAEQ*AASKVP
Trigger: AGGAACTTTTGAAGCAGCTCACTGCTCAGCAGCATG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATGGCCCAAGCTGTACTaGAAAGTAAGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSWPKLY*KVRVSR
Trigger: CCTACTCACCCTTACTTTTCAGTACAGCTTGGGCCA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACATAAAGACTGGGGCTaGTTTCATTTTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILHKDWG*FHFLQG
Trigger: ACCTTGAAGAAAATGAAATCAGCCCCAGTCTTTATG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTACTTTTCACCATTGAGTaGAACATGCTGTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILLFTIE*NMLFFG
Trigger: TCCAAAGAACAGCATGTTTCACTCAATGGTGAAAAG...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGCAGAGAAGGAAGTGTaGAGACTTGGAAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSAEKEV*RLGRLE
Trigger: CTCCAGTCTTCCAAGTCTTCACACTTCCTTCTCTGC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCCTCCGTCGCGGGTTTaGAGGGTCAGAGGACCACGC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFPPSRV*RVRGPR
Trigger: GCGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGCGCCGCCGAAACTGTaGCAACTGCCGCACCGGGCT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTAPPKL*QLPHRA
Trigger: AGCCCGGTGCGGCAGTTGGCACAGTTTCGGCGGCGC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAACCGCCGGGTTGGGCTaGGTGGCCGACGGACTAGTG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTTAGLG*VADGLV
Trigger: CACTAGTCCGTCGGCCACGCAGCCCAACCCGGCGGT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSRDRNS*CSSKPE
Trigger: TTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGCTGGGATTTCTGGCTaGCCTCGTGAACTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKAGISG*PRELSV
Trigger: AACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATGCGTCTTGGCACTCTaGAGGGCAGCCGCCGTACTG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVCVLAL*RAAAVL
Trigger: CAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTGCTCTTCACTCATGTaGAGAAGCAGGACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLCSSLM*RSRTPA
Trigger: GGCTGGAGTCCTGCTTCTGCACATGAGTGAAGAGCA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCAGGTCTGTACTGCTTaGGGAAGCCGAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLQVCTA*GSRGHT
Trigger: TGTATGACCTCGGCTTCCGCAAGCAGTACAGACCTG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTCCTCCTCCTTGGGCTaGCGCCTCGGGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSSSLG*RLGQDL
Trigger: GAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATCCTCCTCCTTGGGCTaGCGCCTCGGGCAGGACCTC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLSSSLG*RLGQDL
Trigger: GAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGTGGCGCGGAAAACGTaGCAGGCCATCTGCGACTCG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYVARKT*QAICDS
Trigger: CGAGTCGCAGATGGCCTGCCACGTTTTCCGCGCCAC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCCTGGCTGGGGTCTGTaGCGCGGAAAACGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLPGWGL*RGKRGR
Trigger: CCTGCCACGTTTTCCGCGCCACAGACCCCAGCCAGG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTATAACATCAGGAACCTaGCTGGGGTCTGTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPITSGT*LGSVAR
Trigger: CCGCGCCACAGACCCCAGCCAGGTTCCTGATGTTAT...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYPRCSP*IFRRCC
Trigger: ACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGCAGACCCGAGAGCTaGTCAGGGCAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSRPES*SGQAGW
Trigger: CCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCACCAGCTTGGCTCTTaGTGGGTAGAGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGHQLGS*WVETFN
Trigger: ATTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCTGTATCACCAGCTTaGCTCTTGGTGGGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSVSPA*LLVGRD
Trigger: GTCTCTACCCACCAAGAGCCAAGCTGGTGATACAGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCGTGTGTCTTCTGCTTaGCTTCACACAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLRVSSA*LHTAAS
Trigger: TGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGGACGGTGGGGACGCTaGCGGTGTCCCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHGRWGR*RCPWWR
Trigger: TCTCCACCAGGGACACCGCCAGCGTCCCCACCGTCC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGGACGGTGGGGACGCTaGCGGTGTCCCTGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLGRWGR*RCPWWR
Trigger: TCTCCACCAGGGACACCGCCAGCGTCCCCACCGTCC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCAGGAAGGGCGCGCTaGGCACCAGGATCACCTCTC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLAGRAR*APGSPL
Trigger: GAGAGGTGATCCTGGTGCTCAGCGCGCCCTTCCTGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGCTGTTCGTGCAGGCTaGACTTCTCCATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADAVRAG*TSPCSH
Trigger: ATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGCTGTTCGTGCAGGCTaGACTTCTCCATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKAVRAG*TSPCSH
Trigger: ATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGGGCAGCCGCCGTACTaGAGGCCTGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYGQPPY*RPVSES
Trigger: TGACTCTGAAACAGGCCTTCAGTACGGCGGCTGCCC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGATCCGGCGAGGAGTaGCAGAGGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVRSGEE*QRFLPH
Trigger: GTGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTGGGAGAAGCAACCCTaGGGAAAATGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYWEKQP*GKCAAA
Trigger: GGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGACTCTCCTGAGTAGCTaGGATTACAGATGCACACCA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGTLLSS*DYRCTP
Trigger: TGGTGTGCATCTGTAATCTCAGCTACTCAGGAGAGT...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTGGATCTTCAGGCGCTaGTGTTCGTGCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPWIFRR*CSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLQGGCR*RQPPPA
Trigger: TGCCGGAGGAGGCTGACGGCACCGACACCCACCTTG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGACCGAAACTCCTGCTaGTCATCAAAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSDRNSC*SSKPES
Trigger: AGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLRDRNS*CSSKPE
Trigger: TTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTGCGTCTTGGCACTCTaGAGGGCAGCCGCCGTACTG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLCVLAL*RAAAVL
Trigger: CAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGCTTTCACAGAGCTTATaGAAAGAGTGCATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRLSQSL*KECIGQ
Trigger: CTGCCCGATGCACTCTTTGCATAAGCTCTGTGAAAG...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATCAAAGATGTCAGCTTaGTCATTATCTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RVQPWASDMQALPLCSILSKMSA*SLSVSD
Trigger: ATCACTGACAGATAATGAGCAAGCTGACATCTTTGA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATGCTCTTCACTCATGTaGAGAAGCAGGACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKCSSLM*RSRTPA
Trigger: GGCTGGAGTCCTGCTTCTGCACATGAGTGAAGAGCA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAGGTCGTGGCTGTTGTaGATGAAGCGCGAGATATGC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADRSWLL*MKREIC
Trigger: GCATATCTCGCGCTTCATCCACAACAGCCACGACCT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAAGGTCGTGGCTGTTGTaGATGAAGCGCGAGATATGC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKRSWLL*MKREIC
Trigger: GCATATCTCGCGCTTCATCCACAACAGCCACGACCT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGTGGCGCGGAAAACGTaGCAGGCCATCTGCGACTCG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFVARKT*QAICDS
Trigger: CGAGTCGCAGATGGCCTGCCACGTTTTCCGCGCCAC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACCTGGCTGGGGTCTGTaGCGCGGAAAACGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTPGWGL*RGKRGR
Trigger: CCTGCCACGTTTTCCGCGCCACAGACCCCAGCCAGG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLPRCSP*IFRRCC
Trigger: ACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCAGGGCAGGCTGGCTaGCCCCGGCAGGTAAGCCAA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSGQAG*PRQVSQ
Trigger: TTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAAGCAGACCCGAGAGCTaGTCAGGGCAGGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSRPES*SGQAGW
Trigger: CCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHRAGRD*VRSRVS
Trigger: GGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCAACCTGGAAGAGCATaGTCCTGTTCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLQPGRA*SCSSPS
Trigger: ACTCGGAGAAGAACAGGACCATGCTCTTCCAGGTTG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCAAATCGCCCAACCTaGAAGAGCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSNRPT*KSMVLF
Trigger: GAACAGGACCATGCTCTTCCAGGTTGGGCGATTTGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCACCAGCTTGGCTCTTaGTGGGTAGAGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLHQLGS*WVETFN
Trigger: ATTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGTATCACCAGCTTaGCTCTTGGTGGGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSVSPA*LLVGRD
Trigger: GTCTCTACCCACCAAGAGCCAAGCTGGTGATACAGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCGTGTGTCTTCTGCTTaGCTTCACACAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADRVSSA*LHTAAS
Trigger: TGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCATTATATACACACTaGGTAACAGTGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSLYTH*VTVRRG
Trigger: CCCCCTCCGCACTGTTACCCAGTGTGTATATAATGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTGCTGCACTGTTCACTaGAGCTCTGCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPCCTVH*SSASAE
Trigger: CTCTGCTGAGGCAGAGCTCCAGTGAACAGTGCAGCA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR CCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCTTTCCACAGACTGGTaGCAGGGGATGGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLSTDW*QGMVSG
Trigger: TCCTGAAACCATCCCCTGCCACCAGTCTGTGGAAAG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCGTGGCTGTTGTGGATaGAGCGCGAGATATGCTGCG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYRGCCG*SARYAA
Trigger: CGCAGCATATCTCGCGCTTCATCCACAACAGCCACG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCCATGCAGTCATCGATaGGGCTTGAGGGGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYPCSHR*GLRGPS
Trigger: AGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGGGCAGCCGCCGTACTaGAGGCCTGTTTCAGAGTCA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLGQPPY*RPVSES
Trigger: TGACTCTGAAACAGGCCTTCAGTACGGCGGCTGCCC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFKRLPS*GRWGRW
Trigger: CCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCTTTCTCTTTGTGCTTaGAGGTGGGTGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLSLCA*RWVAER
Trigger: ACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAGATCCGGCGAGGAGTaGCAGAGGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRSGEE*QRFLPH
Trigger: GTGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGATCCGGCGAGGAGTaGCAGAGGTTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFRSGEE*QRFLPH
Trigger: GTGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACATGCTGCTGAGCAGTaGGCTGCTTCAAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKHAAEQ*AASKVP
Trigger: AGGAACTTTTGAAGCAGCTCACTGCTCAGCAGCATG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCATGCTGCTGAGCAGTaGGCTGCTTCAAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADHAAEQ*AASKVP
Trigger: AGGAACTTTTGAAGCAGCTCACTGCTCAGCAGCATG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGAGGTCCACCTGCTGTaGCTAGGCGCTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTEVHLL*LGAQHQ
Trigger: CTGGTGCTGAGCGCCTAGTCACAGCAGGTGGACCTC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGTACATGCGTCGAACTaGCGAAAGATTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADVHASN*RKIAAL
Trigger: CAGTGCAGCAATCTTTCGTCAGTTCGACGCATGTAC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAATGCCGTGGCTGATCTaGCAGGAGTCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVMPWLI*QESELR
Trigger: CCTGAGCTCTGACTCCTGTCAGATCAGCCACGGCAT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCGCTTCAGCAGCCCTaGCCCATGCAGCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLALQQP*PMQHFH
Trigger: GTGGAAGTGCTGCATGGGGCAGGGCTGCTGAAGCGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGCGCTTCAGCAGCCCTaGCCCATGCAGCACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTALQQP*PMQHFH
Trigger: GTGGAAGTGCTGCATGGGGCAGGGCTGCTGAAGCGC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCATGCTTGCTCGCATaGCCACCACTGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSCLLA*PPLLCS
Trigger: GCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGGCATGATGGCTCACTaGAAGCTCACTGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHGMMAH*KLTASS
Trigger: GGAGCTTGCAGTGAGCTTGCAGTGAGCCATCATGCC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCGAGGGCGGGTTAAATaGGCATCCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRGRVK*ASSSLG
Trigger: GCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGTGGCGCGGAAAACGTaGCAGGCCATCTGCGACTCG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLVARKT*QAICDS
Trigger: CGAGTCGCAGATGGCCTGCCACGTTTTCCGCGCCAC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLPRCSP*IFRRCC
Trigger: ACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGCAGGTAAGCCAAGGTaGGTGTCGGTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHAGKPR*VSVPSA
Trigger: GGCTGACGGCACCGACACCCACCTTGGCTTACCTGC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCAGGTAAGCCAAGGTaGGTGTCGGTGCCGTCAGCC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLAGKPR*VSVPSA
Trigger: GGCTGACGGCACCGACACCCACCTTGGCTTACCTGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATGTCTCCGTCGCGGCTaGGATTTCTGGCTGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTCLRRG*DFWLPS
Trigger: CGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATCAAATCGCCCAACCTaGAAGAGCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKSNRPT*KSMVLF
Trigger: GAACAGGACCATGCTCTTCCAGGTTGGGCGATTTGA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACAACCAGAGATTCGCTaGCACACTGGAATACATAAC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSQPEIR*HTGIHN
Trigger: GTTATGTATTCCAGTGTGCCAGCGAATCTCTGGTTG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACAGCTTGGCTCTTGGTaGGTAGAGACCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKQLGSW*VETFNP
Trigger: AGGATTGAAGGTCTCTACCCACCAAGAGCCAAGCTG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTGAAGCAAGACTGTTaGACCGTTCAAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLKQDC*TVQNCP
Trigger: TGGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTTCTTCAATCTTTTCTaGGTCATCCTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGFFNLF*VILPRQ
Trigger: CTGTCTGGGGAGGATGACCCAGAAAAGATTGAAGAA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTTCAGGGTCCAGCCTTaGGCCAGCGACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLFRVQP*ASDMQA
Trigger: AGCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTCAGGCTAGAGTGCAGTaGCATGATGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPQARVQ*HDGSLQ
Trigger: TTGCAGTGAGCCATCATGCCACTGCACTCTAGCCTG...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCCTTGTGCTCGAAGATaGATACCGCCGGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFPCARR*IPPGWA
Trigger: AGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCGTGGCTGTTGTGGATaGAGCGCGAGATATGCTGCG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRGCCG*SARYAA
Trigger: CGCAGCATATCTCGCGCTTCATCCACAACAGCCACG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACGTCGGGCTGCGCCTTaGTCAGGTAGGCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTRRAAP*SGRQSR
Trigger: CCTACTTTGCCTACCTGATCAAGGCGCAGCCCGACG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGCTGTTCGTGCAGGCTaGACTTCTCCATGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHAVRAG*TSPCSH
Trigger: ATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCAGATAAAGCCAAAGTaGTCCACATGCTTTATACCC +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGQIKPK*STCFIP
Trigger: GGGTATAAAGCATGTGGATCACTTTGGCTTTATCTG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTTGAAGGTGGGTGGCTaGACGTGTGTGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFLKVGG*TCVPVF
Trigger: GAAGACGGGCACACACGTTCAGCCACCCACCTTCAA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTTGAAGGTGGGTGGCTaGACGTGTGTGCCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLKVGG*TCVPVF
Trigger: GAAGACGGGCACACACGTTCAGCCACCCACCTTCAA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATGGGAGAAGCAACCCTaGGGAAAATGCGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLWEKQP*GKCAAA
Trigger: GGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCTCCAGCCACAAAGCTaGTCCCCTGACAGTATCCCA +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLQPQS*SPDSIP
Trigger: TGGGATACTGTCAGGGGATCAGCTTTGTGGCTGGAG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGCAACAGGTCACAATTaGCTAGAGCATCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYATGHN*LEHPRA
Trigger: TGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATTAGTAGCCCCCAATTaGATGGGGCAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKLVAPN*MGQTES
Trigger: TGATTCTGTCTGCCCCATTCAATTGGGGGCTACTAA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTTAGTAGCCCCCAATTaGATGGGGCAGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLVAPN*MGQTES
Trigger: TGATTCTGTCTGCCCCATTCAATTGGGGGCTACTAA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAGATGTAACGATGCATaGAGCATAACTGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSRCNDA*SITGAT
Trigger: TGTTGCACCAGTTATGCTTCATGCATCGTTACATCT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGAGATGTAACGATGCATaGAGCATAACTGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRRCNDA*SITGAT
Trigger: TGTTGCACCAGTTATGCTTCATGCATCGTTACATCT...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGTGGGGACAGTCTACCTaGATTCTGGTAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRWGQST*ILVKAF
Trigger: AAAAGCTTTTACCAGAATTCAGGTAGACTGTCCCCA...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCATGCCGTGGCTGATCTaGCAGGAGTCAGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFMPWLI*QESELR
Trigger: CCTGAGCTCTGACTCCTGTCAGATCAGCCACGGCAT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACACTCTCCTGAGTAGCTaGGATTACAGATGCACACCA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADTLLSS*DYRCTP
Trigger: TGGTGTGCATCTGTAATCTCAGCTACTCAGGAGAGT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCTCTCCTACTCTCCTaGGTAGCTGAGATTACAGAT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKPLLLS*VAEITD
Trigger: ATCTGTAATCTCAGCTACTCAGGAGAGTAGGAGAGG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVRRCCS*RLNFSM
Trigger: CATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTGGATCTTCAGGCGCTaGTGTTCGTGCAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYWIFRR*CSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGACCGAAACTCCTGCTaGTCATCAAAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADDRNSC*SSKPES
Trigger: AGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCTTTCACAGAGCTTATaGAAAGAGTGCATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLSQSL*KECIGQ
Trigger: CTGCCCGATGCACTCTTTGCATAAGCTCTGTGAAAG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTTGGCTTCACACAGCTaGCTCAGGTGTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLASHS*LRCKIT
Trigger: TGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGGGCCTTCCCCGATGTaGACGTGTGTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLGPSPM*TCVFCL
Trigger: CAAGCAGAAGACACACGTGCACATCGGGGAAGGCCC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCTTCGGGAAACGTTTaGCAAGCTGAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSSGNV*QAEDGG
Trigger: CCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCTTCGGGAAACGTTTaGCAAGCTGAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSSGNV*QAEDGG
Trigger: CCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFARLRN*GESESS
Trigger: AGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLARLRN*GESESS
Trigger: AGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGTGGCTGAACGTGTGTaGCCGTCTTCGAAACTGCGG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLVAERV*PSSKLR
Trigger: CCGCAGTTTCGAAGACGGGCACACACGTTCAGCCAC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACTGAGGAAAATGCGCTaGCGCCAGGAGATCCGGCGA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLLRKMR*RQEIRR
Trigger: TCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAATCCATCTTGCTGTTaGATTGCTGAGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSNPSCC*IAEGDL
Trigger: CAAATCTCCCTCAGCAATGCAACAGCAAGATGGATT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGACTGGAGTTCATCTCTaGTTGCTTCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGTGVHL*LLQVSG
Trigger: ACCAGAAACTTGAAGCAAGCAGAGATGAACTCCAGT...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAACTGGAGTTCATCTCTaGTTGCTTCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSTGVHL*LLQVSG
Trigger: ACCAGAAACTTGAAGCAAGCAGAGATGAACTCCAGT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGACCTCTTTCTGACATaGACCAACTTCTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRDLFLT*TNFFIV
Trigger: GACTATGAAGAAGTTGGTGCATGTCAGAAAGAGGTC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCAGGCAGTCATGCTTaGTCGCATGCCCACCACTGC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSGSHA*SHAHHC
Trigger: GCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGATGGGGTTTCACCATaGAGATCTTGTAAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKDGVSP*RSCKAA
Trigger: CGCTGCTTTACAAGATCTGCATGGTGAAACCCCATC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGCTGACACTCAACCGTaGAAACCTTTGATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKADTQP*KPLIRK
Trigger: CTTCCTGATCAAAGGTTTGCACGGTTGAGTGTCAGC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCAACCAGAGATTCGCTaGCACACTGGAATACATAAC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLQPEIR*HTGIHN
Trigger: GTTATGTATTCCAGTGTGCCAGCGAATCTCTGGTTG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATTCCTGGTCACTGACTaGCTTCATTTTCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSFLVTD*LHFLNS
Trigger: AGAGTTCAGAAAATGAAGCCAGTCAGTGACCAGGAA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGTGCTTGAAGGTGGGTaGCTGAACGTGTGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLVLEGG*LNVCAR
Trigger: ACGGGCACACACGTTCAGCCACCCACCTTCAAGCAC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTTCTTCAATCTTTTCTaGGTCATCCTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLFFNLF*VILPRQ
Trigger: CTGTCTGGGGAGGATGACCCAGAAAAGATTGAAGAA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCTTGACACCAGGGACTaGTTTCATGGAAGACAATCT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLLDTRD*FHGRQS
Trigger: AGATTGTCTTCCATGAAACCAGTCCCTGGTGTCAAG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
3UTR CAA 72 bp CATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTaGACACCAGGGACTGGTTTCATGGAAGACAATCTT +
Preference number: 4 (lower is better)
Translates to: HADLVKQRSSTF*TPGTGFMEDNL
Trigger: AAGATTGTCTTCCATGAAACCAGTCCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACCTTGTGCTCGAAGATaGATACCGCCGGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLPCARR*IPPGWA
Trigger: AGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGGTAGGCAAAGTAGGTaGGGTCGTGGCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFGRQSR*GRGCCG
Trigger: TCCACAACAGCCACGACCTCACCTACTTTGCCTACC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATGGGATTGTACTATTTaGAATAGTAGAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSWDCTI*NSRRAF
Trigger: GAAGGCCCTTCTACTATTTCAAATAGTACAATCCCA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATCTGTTAGCTCCCCTTaGGAAGATATTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKSVSSP*EDIFQG
Trigger: TCCCTGGAAAATATCTTCTCAAGGGGAGCTAACAGA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTCTGTTAGCTCCCCTTaGGAAGATATTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSVSSP*EDIFQG
Trigger: TCCCTGGAAAATATCTTCTCAAGGGGAGCTAACAGA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAATTAAGACCTCTTTCTaGCATGCACCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSIKTSF*HAPTSS
Trigger: TGAAGAAGTTGGTGCATGTCAGAAAGAGGTCTTAAT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAAGCGCGAGATATGCTaGGCCTTGTGCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVKREIC*ALCSKM
Trigger: CATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAATGAAGCGCGAGATATaGTGCGCCTTGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVMKREI*CALCSK
Trigger: CTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCAT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCGTCCTCATTATCTTTaGTGGGTTTGGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADRPHYL*WVWHPL
Trigger: AAGAGGATGCCAAACCCAGCAAAGATAATGAGGACG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCTGGGATTTCTGGCTaGCCTCGTGAACTCTCCGTT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFAGISG*PRELSV
Trigger: AACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVCTCVF*LASHSC
Trigger: GCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGGGCCTTCCCCGATGTaGACGTGTGTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLGPSPM*TCVFCL
Trigger: CAAGCAGAAGACACACGTGCACATCGGGGAAGGCCC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCCTTCCACTGCTTGTTaGATTTTCTGGGATTGTACT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLPSTAC*IFWDCT
Trigger: AGTACAATCCCAGAAAATGCAACAAGCAGTGGAAGG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGTGGCTGAACGTGTGTaGCCGTCTTCGAAACTGCGG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHVAERV*PSSKLR
Trigger: CCGCAGTTTCGAAGACGGGCACACACGTTCAGCCAC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAATCCATCTTGCTGTTaGATTGCTGAGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLNPSCC*IAEGDL
Trigger: CAAATCTCCCTCAGCAATGCAACAGCAAGATGGATT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGGAGTTCATCTCTGCTTaGTTCAAGTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGEFISA*FKFLVF
Trigger: GAAAACCAGAAACTTGAAGCAAGCAGAGATGAACTC...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTGTAAAGCCAGAAACTaGCAAATTTCTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLCKARN*QISPRR
Trigger: TCGACGAGGAGAAATTTGGCAGTTTCTGGCTTTACA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAATGTCAGGTCTGTACTaGTTGCGGAAGCCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVMSGLY*LRKPRS
Trigger: TGACCTCGGCTTCCGCAAGCAGTACAGACCTGACAT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTTTCTGCTGAGGCCGTaGCTCTTCAATTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADFLLRP*LFNYGL
Trigger: TAAGCCATAATTGAAGAGGCACGGCCTCAGCAGAAA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTGCCCACCACTGCTGTaGAGCCTGGTTCATAACAGG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLCPPLL*SLVHNR
Trigger: CCTGTTATGAACCAGGCTGCACAGCAGTGGTGGGCA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGGCATGATGGCTCACTaGAAGCTCACTGCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFGMMAH*KLTASS
Trigger: GGAGCTTGCAGTGAGCTTGCAGTGAGCCATCATGCC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTATCTTTGCTGGGTTTaGCATCCTCTTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPYLCWV*HPLSWP
Trigger: CGGCCATGAAAGAGGATGCCAAACCCAGCAAAGATA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCCTCATTATCTTTGCTaGGTTTGGCATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLPHYLC*VWHPLS
Trigger: TGAAAGAGGATGCCAAACCCAGCAAAGATAATGAGG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACGTGTGTCTTCTGCTTaGCTTCACACAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVRVSSA*LHTAAS
Trigger: TGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGTGCCTCTTCAATTATaGCTTATTTCCTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRVPLQL*LISYLG
Trigger: GCCAAGATAGGAAATAAGCCATAATTGAAGAGGCAC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTAGCACCAGTATTAGGTaGTTCCATCAGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPSTSIR*FHQLQG
Trigger: ACCCTGAAGCTGATGGAACCACCTAATACTGGTGCT...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGGAAGTGTGAAGACTTaGAAGACTGGAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLGSVKT*KTGGRI
Trigger: AATTCTTCCTCCAGTCTTCCAAGTCTTCACACTTCC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTAATCTTTCCACAGACTaGTGGCAGGGGATGGTTTCA +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPNLSTD*WQGMVS
Trigger: TGAAACCATCCCCTGCCACCAGTCTGTGGAAAGATT...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGGTAGGCAAAGTAGGTaGGGTCGTGGCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLGRQSR*GRGCCG
Trigger: TCCACAACAGCCACGACCTCACCTACTTTGCCTACC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCAGATAAAGCCAAAGTaGTCCACATGCTTTATACCC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADQIKPK*STCFIP
Trigger: GGGTATAAAGCATGTGGATCACTTTGGCTTTATCTG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCTTTCTCTTTGTGCTTaGAGGTGGGTGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLSLCA*RWVAER
Trigger: ACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCATGCTGCTGAGCAGTaGGCTGCTTCAAAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYHAAEQ*AASKVP
Trigger: AGGAACTTTTGAAGCAGCTCACTGCTCAGCAGCATG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACTCCAGCCACAAAGCTaGTCCCCTGACAGTATCCCA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLLQPQS*SPDSIP
Trigger: TGGGATACTGTCAGGGGATCAGCTTTGTGGCTGGAG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAGCCGAGGTCATACATaGGGAATTTCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSRGHT*GISAFQ
Trigger: TTGAAATGCTGAAATTCCTCATGTATGACCTCGGCT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCATAAAGACTGGGGCTaGTTTCATTTTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLHKDWG*FHFLQG
Trigger: ACCTTGAAGAAAATGAAATCAGCCCCAGTCTTTATG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCCTGGATTTTAGTATaGGCTACCTGTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRAWILV*ATCNFS
Trigger: AGAAAAATTACAGGTAGCTCATACTAAAATCCAGGC...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCAACAGGTCACAATTaGCTAGAGCATCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLATGHN*LEHPRA
Trigger: TGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAAACTCACAGGAGCATaGCCAGTAATCATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADKLTGA*PVIIFL
Trigger: GAGGAAAATGATTACTGGTCATGCTCCTGTGAGTTT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAGATGTAACGATGCATaGAGCATAACTGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADRCNDA*SITGAT
Trigger: TGTTGCACCAGTTATGCTTCATGCATCGTTACATCT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGCAGAGAAGGAAGTGTaGAGACTTGGAAGACTGGAG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVAEKEV*RLGRLE
Trigger: CTCCAGTCTTCCAAGTCTTCACACTTCCTTCTCTGC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLRRCCS*RLNFSM
Trigger: CATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTRRCCS*RLNFSM
Trigger: CATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGACCGAAACTCCTGCTaGTCATCAAAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHDRNSC*SSKPES
Trigger: AGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAGCTTATGCAAAGAGTaGATCGGGCAGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSLCKE*IGQASH
Trigger: GTGTGAGGCCTGCCCGATGCACTCTTTGCATAAGCT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATCTTCGGGAAACGTTTaGCAAGCTGAGGACGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLSSGNV*QAEDGG
Trigger: CCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACAATCCATCTTGCTGTTaGATTGCTGAGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADNPSCC*IAEGDL
Trigger: CAAATCTCCCTCAGCAATGCAACAGCAAGATGGATT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAACTGGAGTTCATCTCTaGTTGCTTCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKTGVHL*LLQVSG
Trigger: ACCAGAAACTTGAAGCAAGCAGAGATGAACTCCAGT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGACCTCTTTCTGACATaGACCAACTTCTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKDLFLT*TNFFIV
Trigger: GACTATGAAGAAGTTGGTGCATGTCAGAAAGAGGTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGACCTCTTTCTGACATaGACCAACTTCTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADDLFLT*TNFFIV
Trigger: GACTATGAAGAAGTTGGTGCATGTCAGAAAGAGGTC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTGTAAAGCCAGAAACTaGCAAATTTCTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADCKARN*QISPRR
Trigger: TCGACGAGGAGAAATTTGGCAGTTTCTGGCTTTACA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCAGGTCTGTACTGCTTaGGGAAGCCGAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFQVCTA*GSRGHT
Trigger: TGTATGACCTCGGCTTCCGCAAGCAGTACAGACCTG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACTTGGGCCAGCGACATaGAGGCTCTTCCTCTCTGTA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTLGPAT*RLFLSV
Trigger: TACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGGTCGTGGCTGTTGTaGATGAAGCGCGAGATATGC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFRSWLL*MKREIC
Trigger: GCATATCTCGCGCTTCATCCACAACAGCCACGACCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACAACCTGGAAGAGCATaGTCCTGTTCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVQPGRA*SCSSPS
Trigger: ACTCGGAGAAGAACAGGACCATGCTCTTCCAGGTTG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLAKSRL*RLPADK
Trigger: TTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACACCAGCTTGGCTCTTaGTGGGTAGAGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVHQLGS*WVETFN
Trigger: ATTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCTGTATCACCAGCTTaGCTCTTGGTGGGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSVSPA*LLVGRD
Trigger: GTCTCTACCCACCAAGAGCCAAGCTGGTGATACAGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACACTGCACTGTTCACTaGAGCTCTGCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLHCTVH*SSASAE
Trigger: CTCTGCTGAGGCAGAGCTCCAGTGAACAGTGCAGTG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377625.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCCCCAACAGATTCCTTaGCTACCATCGGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFPQQIP*LPSVHH
Trigger: GTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAAGACTTGGAAGACTaGAGGAAGAATTACTCTCCT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKEDLED*RKNYSP
Trigger: AGGAGAGTAATTCTTCCTCCAGTCTTCCAAGTCTTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTCTTGACACCAGGGACTaGTTTCATGGAAGACAATCT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPLDTRD*FHGRQS
Trigger: AGATTGTCTTCCATGAAACCAGTCCCTGGTGTCAAG...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAAGCCAGCTGGAAACTaGAGGTGGTCACGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLKPAGN*RWSRRA
Trigger: TGCTCTTCGTGACCACCTCCAGTTTCCAGCTGGCTT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACTCTGTTAGCTCCCCTTaGGAAGATATTTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHSVSSP*EDIFQG
Trigger: TCCCTGGAAAATATCTTCTCAAGGGGAGCTAACAGA...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCTTTCTCTTTGTGCTTaGAGGTGGGTGGCTGAACGT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLSLCA*RWVAER
Trigger: ACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACATTAAGACCTCTTTCTaGCATGCACCAACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADIKTSF*HAPTSS
Trigger: TGAAGAAGTTGGTGCATGTCAGAAAGAGGTCTTAAT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTGGCCCAAGCTGTACTaGAAAGTAAGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFWPKLY*KVRVSR
Trigger: CCTACTCACCCTTACTTTTCAGTACAGCTTGGGCCA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAAAGATTTTCCAGGTTTaGTTCCAAGGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKKIFQV*FQGLDF
Trigger: AAAATCCAGGCCTTGGAATCAAACCTGGAAAATCTT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAACCGTGCAAACCTTTaGTCAGGAAGCCAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLNRANL*SGSQLE
Trigger: TTCCAGCTGGCTTCCTGATCAAAGGTTTGCACGGTT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGATATGCTGCGCCTTGTaGTCGAAGATGAATACCGCC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLICCAL*SKMNTA
Trigger: GGCGGTATTCATCTTCGAGCACAAGGCGCAGCATAT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATAAGCGCGAGATATGCTaGGCCTTGTGCTCGAAGATG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHKREIC*ALCSKM
Trigger: CATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAATGAAGCGCGAGATATaGTGCGCCTTGTGCTCGAAG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLMKREI*CALCSK
Trigger: CTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCAT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRDRNS*CSSKPE
Trigger: TTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCACACAGTTTAATCTaGGTCTTGGCACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSHSLI*VLALCR
Trigger: CCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCACACAGTTTAATCTaGGTCTTGGCACTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSHSLI*VLALCR
Trigger: CCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATAGCTTATGCAAAGAGTaGATCGGGCAGGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSLCKE*IGQASH
Trigger: GTGTGAGGCCTGCCCGATGCACTCTTTGCATAAGCT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACTTTCACAGAGCTTATaGAAAGAGTGCATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVLSQSL*KECIGQ
Trigger: CTGCCCGATGCACTCTTTGCATAAGCTCTGTGAAAG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHCTCVF*LASHSC
Trigger: GCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTCCCTTCTCCATCACTaGACTGTTCACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSLLHH*TVHWSS
Trigger: AGAGCTCCAGTGAACAGTGCAGTGATGGAGAAGGGA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377625.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTGCTCTTCACTCATGTaGAGAAGCAGGACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHCSSLM*RSRTPA
Trigger: GGCTGGAGTCCTGCTTCTGCACATGAGTGAAGAGCA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACAGGTCTGTACTGCTTaGGGAAGCCGAGGTCATACA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTQVCTA*GSRGHT
Trigger: TGTATGACCTCGGCTTCCGCAAGCAGTACAGACCTG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATATGTCAGGTCTGTACTaGTTGCGGAAGCCGAGGTCA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHMSGLY*LRKPRS
Trigger: TGACCTCGGCTTCCGCAAGCAGTACAGACCTGACAT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTTGGAAAGGCAAAAATaGTGCATCAACTTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLERQK*CINFQR
Trigger: CCTCTGAAAGTTGATGCAGCATTTTTGCCTTTCCAA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGATGGGGTTTCACCATaGAGATCTTGTAAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVDGVSP*RSCKAA
Trigger: CGCTGCTTTACAAGATCTGCATGGTGAAACCCCATC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCAACCTGGAAGAGCATaGTCCTGTTCTTCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLQPGRA*SCSSPS
Trigger: ACTCGGAGAAGAACAGGACCATGCTCTTCCAGGTTG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLAKSRL*RLPADK
Trigger: TTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCACCAGCTTGGCTCTTaGTGGGTAGAGACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFHQLGS*WVETFN
Trigger: ATTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCTGTATCACCAGCTTaGCTCTTGGTGGGTAGAGAC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSVSPA*LLVGRD
Trigger: GTCTCTACCCACCAAGAGCCAAGCTGGTGATACAGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACGTGTGTCTTCTGCTTaGCTTCACACAGCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLRVSSA*LHTAAS
Trigger: TGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAGTAACAAGATTTGTTaGTGTATAGCTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSNKIC*CIAFLH
Trigger: GTGGAGAAAAGCTATACACCAACAAATCTTGTTACT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTTTTCAGTTGGCTATTaGCCCTCTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYFSVGY*PSPASP
Trigger: TGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCATGCAACATGCTAGTTaGCACAAAGCAGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFMQHAS*HKAGRE
Trigger: CTCCCTGCCTGCTTTGTGCCAACTAGCATGTTGCAT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCATTATATACACACTaGGTAACAGTGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSLYTH*VTVRRG
Trigger: CCCCCTCCGCACTGTTACCCAGTGTGTATATAATGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACCCCAACAGATTCCTTaGCTACCATCGGTGCATCAC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLPQQIP*LPSVHH
Trigger: GTGATGCACCGATGGTAGCCAAGGAATCTGTTGGGG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGGAAGTGTGAAGACTTaGAAGACTGGAGGAAGAATT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPGSVKT*KTGGRI
Trigger: AATTCTTCCTCCAGTCTTCCAAGTCTTCACACTTCC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCTTTCCACAGACTGGTaGCAGGGGATGGTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHLSTDW*QGMVSG
Trigger: TCCTGAAACCATCCCCTGCCACCAGTCTGTGGAAAG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCAGGCTAGAGTGCAGTaGCATGATGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHQARVQ*HDGSLQ
Trigger: TTGCAGTGAGCCATCATGCCACTGCACTCTAGCCTG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACCAGATAAAGCCAAAGTaGTCCACATGCTTTATACCC +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHQIKPK*STCFIP
Trigger: GGGTATAAAGCATGTGGATCACTTTGGCTTTATCTG...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATGGCCCAAGCTGTACTaGAAAGTAAGGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLWPKLY*KVRVSR
Trigger: CCTACTCACCCTTACTTTTCAGTACAGCTTGGGCCA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACTATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGATTCAAGGGCACACTaGGCTATAACAAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPDSRAH*AITSHY
Trigger: ATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGTACATGCGTCGAACTaGCGAAAGATTGCTGCACTG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHVHASN*RKIAAL
Trigger: CAGTGCAGCAATCTTTCGTCAGTTCGACGCATGTAC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATATATGCTGCGCCTTGTaGTCGAAGATGAATACCGCC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHICCAL*SKMNTA
Trigger: GGCGGTATTCATCTTCGAGCACAAGGCGCAGCATAT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCTTTCACAGAGCTTATaGAAAGAGTGCATCGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLSQSL*KECIGQ
Trigger: CTGCCCGATGCACTCTTTGCATAAGCTCTGTGAAAG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATCCCTTCTCCATCACTaGACTGTTCACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLSLLHH*TVHWSS
Trigger: AGAGCTCCAGTGAACAGTGCAGTGATGGAGAAGGGA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377625.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACTGTAAAGCCAGAAACTaGCAAATTTCTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHCKARN*QISPRR
Trigger: TCGACGAGGAGAAATTTGGCAGTTTCTGGCTTTACA...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACAGCATTTCAAAGGCTTaGTCTTCACTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHSISKA*SSLMCR
Trigger: TCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCT...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATTTCTGCTGAGGCCGTaGCTCTTCAATTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVFLLRP*LFNYGL
Trigger: TAAGCCATAATTGAAGAGGCACGGCCTCAGCAGAAA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCTGACGAAAGATTGCTaGACTGTTCACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLTKDC*TVHWSS
Trigger: AGAGCTCCAGTGAACAGTGCAGCAATCTTTCGTCAG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTATCTTTGCTGGGTTTaGCATCCTCTTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFYLCWV*HPLSWP
Trigger: CGGCCATGAAAGAGGATGCCAAACCCAGCAAAGATA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCAAATCGCCCAACCTaGAAGAGCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSNRPT*KSMVLF
Trigger: GAACAGGACCATGCTCTTCCAGGTTGGGCGATTTGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTCAAATCGCCCAACCTaGAAGAGCATGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSNRPT*KSMVLF
Trigger: GAACAGGACCATGCTCTTCCAGGTTGGGCGATTTGA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACAGCTTGGCTCTTGGTaGGTAGAGACCTTCAATCCT +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLQLGSW*VETFNP
Trigger: AGGATTGAAGGTCTCTACCCACCAAGAGCCAAGCTG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGTGCCTCTTCAATTATaGCTTATTTCCTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTILQPPISSNICLSYSPVPLQL*LISYLG
Trigger: GCCAAGATAGGAAATAAGCCATAATTGAAGAGGCAC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGCACCAGTATTAGGTaGTTCCATCAGCTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSTSIR*FHQLQG
Trigger: ACCCTGAAGCTGATGGAACCACCTAATACTGGTGCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTCATTATATACACACTaGGTAACAGTGCGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFSLYTH*VTVRRG
Trigger: CCCCCTCCGCACTGTTACCCAGTGTGTATATAATGA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCTGGAAACTGGAGGTaGTCACGAAGAGCAATGATT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFAGNWR*SRRAMI
Trigger: AATCATTGCTCTTCGTGACCACCTCCAGTTTCCAGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGATAACATCAGGAACCTaGCAAGGGCCAAAGCTATGG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLITSGT*QGPKLW
Trigger: CCATAGCTTTGGCCCTTGCCAGGTTCCTGATGTTAT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGCCGAGGTCATACATaGGGAATTTCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSRGHT*GISAFQ
Trigger: TTGAAATGCTGAAATTCCTCATGTATGACCTCGGCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACATCCTCACAGGAATATaGAGATTCCTGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYILTGI*RFLKLI
Trigger: GATGAGCTTCAGGAATCTTCATATTCCTGTGAGGAT...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAATCCTCACAGGAATATaGAGATTCCTGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVILTGI*RFLKLI
Trigger: GATGAGCTTCAGGAATCTTCATATTCCTGTGAGGAT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACCTTTTCACCATTGAGTaGAACATGCTGTTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSILLRNTKHRSPACTVHLFTIE*NMLFFG
Trigger: TCCAAAGAACAGCATGTTTCACTCAATGGTGAAAAG...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATATACCCAGCATGCGTaGATGTCATCTAATGAGCTA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVYTQHA*MSSNEL
Trigger: TAGCTCATTAGATGACATTCACGCATGCTGGGTATA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCCTCTCCTACTCTCCTaGGTAGCTGAGATTACAGAT +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHPLLLS*VAEITD
Trigger: ATCTGTAATCTCAGCTACTCAGGAGAGTAGGAGAGG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCGTCCTCATTATCTTTaGTGGGTTTGGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFRPHYL*WVWHPL
Trigger: AAGAGGATGCCAAACCCAGCAAAGATAATGAGGACG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCGTCCTCATTATCTTTaGTGGGTTTGGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRPHYL*WVWHPL
Trigger: AAGAGGATGCCAAACCCAGCAAAGATAATGAGGACG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGACCGAAACTCCTGCTaGTCATCAAAGCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHDRNSC*SSKPES
Trigger: AGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTTGGCTTCACACAGCTaGCTCAGGTGTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFLASHS*LRCKIT
Trigger: TGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCCTTCCACTGCTTGTTaGATTTTCTGGGATTGTACT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYPSTAC*IFWDCT
Trigger: AGTACAATCCCAGAAAATGCAACAAGCAGTGGAAGG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACCTTCCACTGCTTGTTaGATTTTCTGGGATTGTACT +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVPSTAC*IFWDCT
Trigger: AGTACAATCCCAGAAAATGCAACAAGCAGTGGAAGG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTTTCTGCTGAGGCCGTaGCTCTTCAATTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLFLLRP*LFNYGL
Trigger: TAAGCCATAATTGAAGAGGCACGGCCTCAGCAGAAA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACTGACGAAAGATTGCTaGACTGTTCACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLLTKDC*TVHWSS
Trigger: AGAGCTCCAGTGAACAGTGCAGCAATCTTTCGTCAG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATACTCTCCTTGTACATaGGTCGAACTGACGAAAGAT +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVYSPCT*VELTKD
Trigger: ATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTATCTTTGCTGGGTTTaGCATCCTCTTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHYLCWV*HPLSWP
Trigger: CGGCCATGAAAGAGGATGCCAAACCCAGCAAAGATA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCAACCAGAGATTCGCTaGCACACTGGAATACATAAC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLQPEIR*HTGIHN
Trigger: GTTATGTATTCCAGTGTGCCAGCGAATCTCTGGTTG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTTCCTGGTCACTGACTaGCTTCATTTTCTGAACTCT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYFLVTD*LHFLNS
Trigger: AGAGTTCAGAAAATGAAGCCAGTCAGTGACCAGGAA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATTTTCAGTTGGCTATTaGCCCTCTCCAGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTFSVGY*PSPASP
Trigger: TGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
3UTR CAA 72 bp TCACAATTTGGTGGGAAAGTGGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAATAAAGAGGAATTCATT +
Preference number: 4 (lower is better)
Translates to: SQFGGKVANPCH*VTVAPNKEEFI
Trigger: AATGAATTCCTCTTTATTTGGTGCCACAGTCACCAAATGACAAGGATTTGCCACTTTCCCACCAAATTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATGGGATTGTACTATTTaGAATAGTAGAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVWDCTI*NSRRAF
Trigger: GAAGGCCCTTCTACTATTTCAAATAGTACAATCCCA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAGCCGAGGTCATACATaGGGAATTTCAGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSRGHT*GISAFQ
Trigger: TTGAAATGCTGAAATTCCTCATGTATGACCTCGGCT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCCACCTTTTCACCATTaGGTGAAACATGCTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLPPFHH*VKHAVL
Trigger: AAGAACAGCATGTTTCACTCAATGGTGAAAAGGTGG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGATTCAAGGGCACACTaGGCTATAACAAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYDSRAH*AITSHY
Trigger: ATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAGATGTAACGATGCATaGAGCATAACTGGTGCAACA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLRCNDA*SITGAT
Trigger: TGTTGCACCAGTTATGCTTCATGCATCGTTACATCT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTGGGGACAGTCTACCTaGATTCTGGTAAAAGCTTTT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLWGQST*ILVKAF
Trigger: AAAAGCTTTTACCAGAATTCAGGTAGACTGTCCCCA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACGTCCTCATTATCTTTaGTGGGTTTGGCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTRPHYL*WVWHPL
Trigger: AAGAGGATGCCAAACCCAGCAAAGATAATGAGGACG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTTGGCTTCACACAGCTaGCTCAGGTGTAAAATCACA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHLASHS*LRCKIT
Trigger: TGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGAGTTCATCTCTGCTTaGTTCAAGTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYEFISA*FKFLVF
Trigger: GAAAACCAGAAACTTGAAGCAAGCAGAGATGAACTC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGACTGGAGTTCATCTCTaGTTGCTTCAAGTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLTGVHL*LLQVSG
Trigger: ACCAGAAACTTGAAGCAAGCAGAGATGAACTCCAGT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTTTCTGCTGAGGCCGTaGCTCTTCAATTATGGCTTA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHFLLRP*LFNYGL
Trigger: TAAGCCATAATTGAAGAGGCACGGCCTCAGCAGAAA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACATAATGCATGTAGATaGAACATGCTAGTTGGCACA +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVHNACR*NMLVGT
Trigger: TGTGCCAACTAGCATGTTGCATCTACATGCATTATG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCCTCATTATCTTTGCTaGGTTTGGCATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLPHYLC*VWHPLS
Trigger: TGAAAGAGGATGCCAAACCCAGCAAAGATAATGAGG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCAACCAGAGATTCGCTaGCACACTGGAATACATAAC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHQPEIR*HTGIHN
Trigger: GTTATGTATTCCAGTGTGCCAGCGAATCTCTGGTTG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACTGAAGCAAGACTGTTaGACCGTTCAAAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTLKQDC*TVQNCP
Trigger: TGGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATTCTTCAATCTTTTCTaGGTCATCCTCCCCAGACAG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTFFNLF*VILPRQ
Trigger: CTGTCTGGGGAGGATGACCCAGAAAAGATTGAAGAA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGCACTCACAATTTGGTaGGAAAGTGGCAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHALTIW*ESGKSL
Trigger: CAAGGATTTGCCACTTTCCCACCAAATTGTGAGTGC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCAAGCACTCACAATTTaGTGGGAAAGTGGCAAATCC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHQALTI*WESGKS
Trigger: GGATTTGCCACTTTCCCACCAAATTGTGAGTGCTTG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACAGATAAAGCCAAAGTaGTCCACATGCTTTATACCC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLQIKPK*STCFIP
Trigger: GGGTATAAAGCATGTGGATCACTTTGGCTTTATCTG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAATCCTCACAGGAATATaGAGATTCCTGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTILTGI*RFLKLI
Trigger: GATGAGCTTCAGGAATCTTCATATTCCTGTGAGGAT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAATCCTCACAGGAATATaGAGATTCCTGAAGCTCATC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLILTGI*RFLKLI
Trigger: GATGAGCTTCAGGAATCTTCATATTCCTGTGAGGAT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAAGATTTTCCAGGTTTaGTTCCAAGGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFKIFQV*FQGLDF
Trigger: AAAATCCAGGCCTTGGAATCAAACCTGGAAAATCTT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGAAGATTTTCCAGGTTTaGTTCCAAGGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLKIFQV*FQGLDF
Trigger: AAAATCCAGGCCTTGGAATCAAACCTGGAAAATCTT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAATCCTTGTCATTTGGTaGCTGTGGCACCAAATAAAG +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTILVIW*LWHQIK
Trigger: CTTTATTTGGTGCCACAGTCACCAAATGACAAGGAT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCCCTTCTCCATCACTaGTTTCATTTTCATACTGTG +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSLLHH*FHFHTV
Trigger: CACAGTATGAAAATGAAATCAGTGATGGAGAAGGGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000431480.6
CDS-3UTR GCA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCAAAGATGTCAGCTTaGTCATTATCTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSKMSA*SLSVSD
Trigger: ATCACTGACAGATAATGAGCAAGCTGACATCTTTGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAAATCCATCTTGCTGTTaGATTGCTGAGGGAGATTTG +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLNPSCC*IAEGDL
Trigger: CAAATCTCCCTCAGCAATGCAACAGCAAGATGGATT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGAGTTCATCTCTGCTTaGTTCAAGTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLEFISA*FKFLVF
Trigger: GAAAACCAGAAACTTGAAGCAAGCAGAGATGAACTC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTGTAAAGCCAGAAACTaGCAAATTTCTCCTCGTCGA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHCKARN*QISPRR
Trigger: TCGACGAGGAGAAATTTGGCAGTTTCTGGCTTTACA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATAGCATTTCAAAGGCTTaGTCTTCACTCATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSISKA*SSLMCR
Trigger: TCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGAAAGGCAAAAATGCTaGATCAACTTTCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHERQKC*INFQRH
Trigger: GTGCCTCTGAAAGTTGATGCAGCATTTTTGCCTTTC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACCTCATTATCTTTGCTaGGTTTGGCATCCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTPHYLC*VWHPLS
Trigger: TGAAAGAGGATGCCAAACCCAGCAAAGATAATGAGG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGTGCCTCTTCAATTATaGCTTATTTCCTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFVPLQL*LISYLG
Trigger: GCCAAGATAGGAAATAAGCCATAATTGAAGAGGCAC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCTACATATGTCCAATaGCTTAGGATTGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSTYVQ*LRIGML
Trigger: GAGCATGCCAATCCTAAGCCATTGGACATATGTAGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGAAGACTTGGAAGACTaGAGGAAGAATTACTCTCCT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTEDLED*RKNYSP
Trigger: AGGAGAGTAATTCTTCCTCCAGTCTTCCAAGTCTTC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATGGGATTGTACTATTTaGAATAGTAGAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTWDCTI*NSRRAF
Trigger: GAAGGCCCTTCTACTATTTCAAATAGTACAATCCCA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTGGGATTGTACTATTTaGAATAGTAGAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHWDCTI*NSRRAF
Trigger: GAAGGCCCTTCTACTATTTCAAATAGTACAATCCCA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACATAAAGACTGGGGCTaGTTTCATTTTCTTCAAGGT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTHKDWG*FHFLQG
Trigger: ACCTTGAAGAAAATGAAATCAGCCCCAGTCTTTATG...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGGCCTGGATTTTAGTATaGGCTACCTGTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLAWILV*ATCNFS
Trigger: AGAAAAATTACAGGTAGCTCATACTAAAATCCAGGC...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCCTGGATTTTAGTATaGGCTACCTGTAATTTTTCT +
Preference number: 4 (lower is better)
Translates to: MFVICSSKLSETPRALLFAWILV*ATCNFS
Trigger: AGAAAAATTACAGGTAGCTCATACTAAAATCCAGGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR TCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAAAGATTTTCCAGGTTTaGTTCCAAGGCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTKIFQV*FQGLDF
Trigger: AAAATCCAGGCCTTGGAATCAAACCTGGAAAATCTT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCAAAGATGTCAGCTTaGTCATTATCTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSKMSA*SLSVSD
Trigger: ATCACTGACAGATAATGAGCAAGCTGACATCTTTGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGAGTTCATCTCTGCTTaGTTCAAGTTTCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLEFISA*FKFLVF
Trigger: GAAAACCAGAAACTTGAAGCAAGCAGAGATGAACTC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGTAACAAGATTTGTTaGTGTATAGCTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSNKIC*CIAFLH
Trigger: GTGGAGAAAAGCTATACACCAACAAATCTTGTTACT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGTGCCTCTTCAATTATaGCTTATTTCCTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTVPLQL*LISYLG
Trigger: GCCAAGATAGGAAATAAGCCATAATTGAAGAGGCAC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATAATTTGGTGGGAAAGTaGCAAATCCTTGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHNLVGK*QILVIW
Trigger: CCAAATGACAAGGATTTGCCACTTTCCCACCAAATT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTCAAAGATGTCAGCTTaGTCATTATCTGTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSKMSA*SLSVSD
Trigger: ATCACTGACAGATAATGAGCAAGCTGACATCTTTGA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTGCAATATACAAAGATaGTCTGGCTTTGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: QRHYHRIISEKENCKCTLCNIQR*SGFVSL
Trigger: TAGTGAAACAAAGCCAGAGCATCTTTGTATATTGCA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATGCAATATACAAAGATaGTCTGGCTTTGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTCNIQR*SGFVSL
Trigger: TAGTGAAACAAAGCCAGAGCATCTTTGTATATTGCA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR GCA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATGCAATATACAAAGATaGTCTGGCTTTGTTTCACTA +
Preference number: 4 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLCNIQR*SGFVSL
Trigger: TAGTGAAACAAAGCCAGAGCATCTTTGTATATTGCA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CCA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAAGTAACAAGATTTGTTaGTGTATAGCTTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSNKIC*CIAFLH
Trigger: GTGGAGAAAAGCTATACACCAACAAATCTTGTTACT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp GGGCTGGCGCCTCGGGCAGGACCTCCCCTTCCTCCGTCGCGGGTTTaGAGGGTCAGAGGACCACGCCGAGGGTCCCCGCGGCCGCCGGCT +
Preference number: 5 (lower is better)
Translates to: GLAPRAGPPLPPSRV*RVRGPRRGSPRPPA
Trigger: AGCCGGCGGCCGCGGGGACCCTCGGCGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGGAAGGGGAGGTCCTGCCCGAGGCGCCAGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS GCA 90 bp CTGCCTGGGAGCGGCGCGACCCCGAACTCCGCGCTTCAGCAGCCCTaGCCCATGCAGCACTTCCACGGGCGCGGCTCGGAGGCTCCGGCG +
Preference number: 5 (lower is better)
Translates to: LPGSGATPNSALQQP*PMQHFHGRGSEAPA
Trigger: CGCCGGAGCCTCCGAGCCGCGCCCGTGGAAGTGCTGCATGGGGCAGGGCTGCTGAAGCGCGGAGTTCGGGGTCGCGCCGCTCCCAGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 90 bp GGCGCCGCCGAAACTGTGCCAACTGCCGCACCGGGCTCCCGCGCCTaGCTGGGAGCGGCGCGACCCCGAACTCCGCGCTTCAGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GAAETVPTAAPGSRA*LGAARPRTPRFSSP
Trigger: AGGGCTGCTGAAGCGCGGAGTTCGGGGTCGCGCCGCTCCCAGGCAGGCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTCGGCGGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 90 bp CCGCCGAAACTGTGCCAACTGCCGCACCGGGCTCCCGCGCCTGCCTaGGAGCGGCGCGACCCCGAACTCCGCGCTTCAGCAGCCCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPKLCQLPHRAPAPA*ERRDPELRASAALP
Trigger: GGGCAGGGCTGCTGAAGCGCGGAGTTCGGGGTCGCGCCGCTCCCAGGCAGGCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTCGGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 90 bp GGGCAGGCTGGCTGGCCCCGGCAGGTAAGCCAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCAGGCAGTCTCCGGGGGACCCGGGCA +
Preference number: 5 (lower is better)
Translates to: GQAGWPRQVSQGGCR*RQPPPAGSLRGTRA
Trigger: TGCCCGGGTCCCCCGGAGACTGCCTGCCGGAGGAGGCTGACGGCACCGACACCCACCTTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 90 bp CAGCCGGAACCGCTTATCGCTTGGCTTCCCGGGGCCGGGCTGAGCTaGGACGCCCGGCTCGGGCTCCAGGGGGTGCGGGAACGGCTCATC +
Preference number: 5 (lower is better)
Translates to: QPEPLIAWLPGAGLS*DARLGLQGVRERLI
Trigger: GATGAGCCGTTCCCGCACCCCCTGGAGCCCGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCCGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 90 bp TACCACAGCCGGAACCGCTTATCGCTTGGCTTCCCGGGGCCGGGCTaGGCTGAGACGCCCGGCTCGGGCTCCAGGGGGTGCGGGAACGGC +
Preference number: 5 (lower is better)
Translates to: YHSRNRLSLGFPGPG*AETPGSGSRGCGNG
Trigger: GCCGTTCCCGCACCCCCTGGAGCCCGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCCGGCTGTGGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 90 bp GAGCTGGTCAGGGCAGGCTGGCTGGCCCCGGCAGGTAAGCCAAGGTaGGTGTCGGTGCCGTCAGCCTCCTCCGGCAGGCAGTCTCCGGGG +
Preference number: 5 (lower is better)
Translates to: ELVRAGWLAPAGKPR*VSVPSASSGRQSPG
Trigger: CCCCGGAGACTGCCTGCCGGAGGAGGCTGACGGCACCGACACCCACCTTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 90 bp AAGCGCCCGGCAGGCGAGGGCGGGTTAAATGGGCATCCTCCTCCTTaGGCTGGCGCCTCGGGCAGGACCTCCCCTTCCTCCGTCGCGGGT +
Preference number: 5 (lower is better)
Translates to: KRPAGEGGLNGHPPP*AGASGRTSPSSVAG
Trigger: ACCCGCGACGGAGGAAGGGGAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCGCCTGCCGGGCGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 90 bp CCCGGCAGGCGAGGGCGGGTTAAATGGGCATCCTCCTCCTTGGGCTaGCGCCTCGGGCAGGACCTCCCCTTCCTCCGTCGCGGGTTTGCA +
Preference number: 5 (lower is better)
Translates to: PGRRGRVKWASSSLG*RLGQDLPFLRRGFA
Trigger: TGCAAACCCGCGACGGAGGAAGGGGAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCGCCTGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 90 bp GAGACGCCCGGCTCGGGCTCCAGGGGGTGCGGGAACGGCTCATCCTaGATGCAGCTGGGCGGCTCCATAACTCTCGCCTCACCAGGGCAC +
Preference number: 5 (lower is better)
Translates to: ETPGSGSRGCGNGSS*MQLGGSITLASPGH
Trigger: GTGCCCTGGTGAGGCGAGAGTTATGGAGCCGCCCAGCTGCATTCAGGATGAGCCGTTCCCGCACCCCCTGGAGCCCGAGCCGGGCGTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 90 bp TCCGCTCAGGGAAGCAGACCCGAGAGCTGGTCAGGGCAGGCTGGCTaGCCCCGGCAGGTAAGCCAAGGTGGGTGTCGGTGCCGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: SAQGSRPESWSGQAG*PRQVSQGGCRCRQP
Trigger: AGGCTGACGGCACCGACACCCACCTTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCTTCCCTGAGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 90 bp GCGCTCGCGTGTCTCCGTCGCGGCTGGGATTTCTGGCTGCCCTCGTaGACTCTCCGTTGCACGCCGGTGACACTGCTGCACCGAGACCGA +
Preference number: 5 (lower is better)
Translates to: ALACLRRGWDFWLPS*TLRCTPVTLLHRDR
Trigger: TCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACACGCGAGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp CATGGTCCTGTTCTTCTCCGAGTCCGAGGGCTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCGCGGCTGGGATTTCTGGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: HGPVLLRVRGLDVTG*ARVSPSRLGFLAAL
Trigger: GAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAACAGGACCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp ACCACCTCCAAGTCAGCCAGGTCCTCTCCTGGGTCCGGACCGCGCTaGTCCCCTTGGATCTTCAGGCGCTGCTGTTCGTGCAGGCTGAAC +
Preference number: 5 (lower is better)
Translates to: TTSKSARSSPGSGPR*SPWIFRRCCSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCTGACTTGGAGGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 90 bp AGAGCATGGTCCTGTTCTTCTCCGAGTCCGAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCCGTCGCGGCTGGGATTTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: RAWSCSSPSPRAGRD*VRSRVSVAAGISGC
Trigger: GCAGCCAGAAATCCCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAACAGGACCATGCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 90 bp TGGAAGAGCATGGTCCTGTTCTTCTCCGAGTCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGTCTCCGTCGCGGCTGGGATTTCTGG +
Preference number: 5 (lower is better)
Translates to: WKSMVLFFSESEGWT*LGALACLRRGWDFW
Trigger: CCAGAAATCCCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAACAGGACCATGCTCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 90 bp AGCCAGAATCTTCCAAAATCCGCTCAGGGAAGCAGACCCGAGAGCTaGTCAGGGCAGGCTGGCTGGCCCCGGCAGGTAAGCCAAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SQNLPKSAQGSRPES*SGQAGWPRQVSQGG
Trigger: CCCACCTTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCTTCCCTGAGCGGATTTTGGAAGATTCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 90 bp AAACTGCGGGGAGTCGGAATCCTCTTCGGGAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGGCGGTGTCCCTGGTGGAGAATCCCC +
Preference number: 5 (lower is better)
Translates to: KLRGVGILFGKRLPS*GRWGRWRCPWWRIP
Trigger: GGGGATTCTCCACCAGGGACACCGCCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGAGGATTCCGACTCCCCGCAGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CCA 90 bp AAGTCAGCCAGGTCCTCTCCTGGGTCCGGACCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGTTCGTGCAGGCTGAACTTCTCCATG +
Preference number: 5 (lower is better)
Translates to: KSARSSPGSGPRCSP*IFRRCCSCRLNFSM
Trigger: CATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATGGGCATCCTCCTCCTaGGGCTGGCGCCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILWASSS*GWRLGQ
Trigger: CTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 90 bp AGGTCGTGGCTGTTGTGGATGAAGCGCGAGATATGCTGCGCCTTGTaGTCGAAGATGAATACCGCCGGGTTGGGCTGCGTGGCCGACGGA +
Preference number: 5 (lower is better)
Translates to: RSWLLWMKREICCAL*SKMNTAGLGCVADG
Trigger: TCCGTCGGCCACGCAGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAGCCACGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 90 bp TCCGGACCGCGCTGCTCCCCTTGGATCTTCAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATGCAGTCATCGATGAGGCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SGPRCSPWIFRRCCS*RLNFSMQSSMRLEG
Trigger: CCCCTCAAGCCTCATCGATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGGAACCGCTTATCGCTaGGCTTCCCGGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILGTAYR*ASRGRA
Trigger: AGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 90 bp GCTGGGATTTCTGGCTGCCCTCGTGAACTCTCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACCGAAACTCCTGCTGCTCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: AGISGCPRELSVARR*HCCTETETPAAHQS
Trigger: GCTTTGATGAGCAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGTGGCTCTCTCTCCCTaGCTATCTATGAGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVVALSP*LSMRGP
Trigger: AGGCCCCCTCATAGATAGCAAGGGAGAGAGAGCCAC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTACGTGTGTCTTCTGCTaGGCTTCACACAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVTCVFC*ASHSCL
Trigger: GAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGT...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS GCA 90 bp GTGCTTGAAGGTGGGTGGCTGAACGTGTGTGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCTTCGGGAAACGTTTGCCAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: VLEGGWLNVCARLRN*GESESSSGNVCQAE
Trigger: CTCAGCTTGGCAAACGTTTCCCGAAGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGCACACACGTTCAGCCACCCACCTTCAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp GAGGGAGATTTGTTCATGGGAGAAGCAACCCTGAGGAAAATGCGCTaGCGCCAGGAGATCCGGCGAGGAGTGACAGAGGTTCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: EGDLFMGEATLRKMR*RQEIRRGVTEVPPT
Trigger: TGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCATGAACAAATCTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000493487.1
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACACGTGTGTCTTCTGCTaGGCTTCACACAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDTCVFC*ASHSCL
Trigger: GAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp CGTTGCACGCCGGTGACACTGCTGCACCGAGACCGAAACTCCTGCTaGTCATCAAAGCCAGAATCTTCCAAAATCCGCTCAGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RCTPVTLLHRDRNSC*SSKPESSKIRSGKQ
Trigger: CTGCTTCCCTGAGCGGATTTTGGAAGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp CTCCGTTGCACGCCGGTGACACTGCTGCACCGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAATCTTCCAAAATCCGCTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: LRCTPVTLLHRDRNS*CSSKPESSKIRSGK
Trigger: CTTCCCTGAGCGGATTTTGGAAGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp AGCTTATGCAAAGAGTGCATCGGGCAGGCCTCACACAGTTTAATCTaGGTCTTGGCACTCTGCAGGGCAGCCGCCGTACTGAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SLCKECIGQASHSLI*VLALCRAAAVLKAC
Trigger: ACAGGCCTTCAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGAGGCCTGCCCGATGCACTCTTTGCATAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTCCCCAACAGATTCCTaGGCTACCATCGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDSPTDS*ATIGAS
Trigger: TGATGCACCGATGGTAGCCAAGGAATCTGTTGGGGA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGTGGCTCTCTCTCCCTaGCTATCTATGAGGGGGCCT +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILVALSP*LSMRGP
Trigger: AGGCCCCCTCATAGATAGCAAGGGAGAGAGAGCCAC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCCTCCGTCGCGGGTTaGCAGGGTCAGAGGACCACG +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSSVAG*QGQRTT
Trigger: CGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSTALLP*DLQALL
Trigger: CAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAAGTTTAATCTGCGTCTaGGCACTCTGCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILSLICV*ALCRAA
Trigger: GGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTGGACAGCTGGTACATTaGAATCTGCAGCGACATCAT +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVGQLVH*NLQRHH
Trigger: ATGATGTCGCTGCAGATTCAAATGTACCAGCTGTCC...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACCAGCAGCTTCCGGAGTaGCTCCACTGTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDQQLPE*LHCLLI
Trigger: TATCAAAAGACAGTGGAGCAACTCCGGAAGCTGCTG...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCACTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGCTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 5 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS CCA 90 bp CTCCCATCCTGCAAATTCAGCTTTCTCTTTGTGCTTGAAGGTGGGTaGCTGAACGTGTGTGCCCGTCTTCGAAACTGCGGGGAGTCGGAA +
Preference number: 5 (lower is better)
Translates to: LPSCKFSFLFVLEGG*LNVCARLRNCGESE
Trigger: TTCCGACTCCCCGCAGTTTCGAAGACGGGCACACACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATTTGCAGGATGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATCACCAGCTTGGCTCTaGGTGGGTAGAGACCTTCAA +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILSPAWL*VGRDLQ
Trigger: TTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTGA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTACCTTCCACTGCTTGTaGCATTTTCTGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVTFHCL*HFLGLY
Trigger: GTACAATCCCAGAAAATGCAACAAGCAGTGGAAGGT...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTCATCTTGCTGTTGCATaGCTGAGGGAGATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVHLAVA*LREICS
Trigger: TGAACAAATCTCCCTCAGCAATGCAACAGCAAGATG...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 90 bp CATCCTGCAAATTCAGCTTTCTCTTTGTGCTTGAAGGTGGGTGGCTaGACGTGTGTGCCCGTCTTCGAAACTGCGGGGAGTCGGAATCCT +
Preference number: 5 (lower is better)
Translates to: HPANSAFSLCLKVGG*TCVPVFETAGSRNP
Trigger: AGGATTCCGACTCCCCGCAGTTTCGAAGACGGGCACACACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATTTGCAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTCCTCCGTCGCGGGTTaGCAGGGTCAGAGGACCACG +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSSVAG*QGQRTT
Trigger: CGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGGA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACATGAATACCGCCGGGTaGGGCTGCGTGGCCGACGGA +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADMNTAG*GCVADG
Trigger: TCCGTCGGCCACGCAGCCCAACCCGGCGGTATTCAT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAATGAATACCGCCGGGTaGGGCTGCGTGGCCGACGGA +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKMNTAG*GCVADG
Trigger: TCCGTCGGCCACGCAGCCCAACCCGGCGGTATTCAT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKTALLP*DLQALL
Trigger: CAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACAGGCTGAGTGCAACCTaGAATATAACTTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDRLSAT*NITSVP
Trigger: GGGAACTGAAGTTATATTCAAGGTTGCACTCAGCCT...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACCTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTTCCACCTTTTCACCATaGAGTGAAACATGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVSTFSP*SETCCS
Trigger: AGAACAGCATGTTTCACTCAATGGTGAAAAGGTGGA...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTATTATCTTTGCTGGGTTaGGCATCCTCTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILLSLLG*ASSFMA
Trigger: GGCCATGAAAGAGGATGCCAAACCCAGCAAAGATAA...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAAATTCAGCTTTCTCTTaGTGCTTGAAGGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILNSAFS*CLKVGG
Trigger: GCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGTTTTGTCTTTTCAGTaGGCTATTGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILVLSFQ*AIGPLQ
Trigger: CTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAAC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILALLLG*QFRSLS
Trigger: GCTGAGAGACCTAAACTGCAACCCTAACAACAAAGC...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GAGCTCAGGCAGTCATGCTTGCTCGCATGCCCACCACTGCTGTGCAGCCTGGTTTTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: ELRQSCLLACPPLLCSLVFPILA*LLGLQF
Trigger: AAACTGCAACCCTAACAACAAAGCCAAGATAGGAAA...AACCAGGCTGCACAGCAGTGGTGGGCATGCGAGCAAGCATGACTGCCTGAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTCCACCTTTTCACCATaGAGTGAAACATGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDSTFSP*SETCCS
Trigger: AGAACAGCATGTTTCACTCAATGGTGAAAAGGTGGA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGGAACCGCTTATCGCTaGGCTTCCCGGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYGTAYR*ASRGRA
Trigger: AGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGTGAGGTCGTGGCTGTaGTGGATGAAGCGCGAGATA +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSVRSWL*WMKREI
Trigger: TATCTCGCGCTTCATCCACAACAGCCACGACCTCAC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAACCTTCCACTGCTTGTaGCATTTTCTGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILTFHCL*HFLGLY
Trigger: GTACAATCCCAGAAAATGCAACAAGCAGTGGAAGGT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCAGGTCTGTACTGCTaGCGGAAGCCGAGGTCATAC +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSGLYC*RKPRSY
Trigger: GTATGACCTCGGCTTCCGCAAGCAGTACAGACCTGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AGGGTCCAGCCTTGGGCCAGCGACATGCAGGCTCTTCCTCTCTGTAGTATTCTAAGGCTGAGTGCAACCTaGAATATAACTTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RVQPWASDMQALPLCSILRLSAT*NITSVP
Trigger: GGGAACTGAAGTTATATTCAAGGTTGCACTCAGCCT...TAGAATACTACAGAGAGGAAGAGCCTGCATGTCGCTGGCCCAAGGCTGGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDFPILA*LLGLQF
Trigger: AAACTGCAACCCTAACAACAAAGCCAAGATAGGAAA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATGGGCATCCTCCTCCTaGGGCTGGCGCCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLWASSS*GWRLGQ
Trigger: CTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAGTTTAATCTGCGTCTaGGCACTCTGCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSLICV*ALCRAA
Trigger: GGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCAGGTCTGTACTGCTaGCGGAAGCCGAGGTCATAC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSGLYC*RKPRSY
Trigger: GTATGACCTCGGCTTCCGCAAGCAGTACAGACCTGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GCACCAGTATTAGGTGGTTCCATCAGCTTCAGGGTCCAGCCTTGGGCCAGCGACTCCAGTTGGAAAATTTaGTATTTTCTTGTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: APVLGGSISFRVQPWASDSSWKI*YFLVAL
Trigger: GAGAGCCACAAGAAAATACAAAATTTTCCAACTGGA...GTCGCTGGCCCAAGGCTGGACCCTGAAGCTGATGGAACCACCTAATACTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS CCA 90 bp GACACTCAACCGTGCAAACCTTTGATCAGGAAGCCAGCTGGAAACTaGAGGTGGTCACGAAGAGCAATGATTTTGCCAAACTGGTGTAGT +
Preference number: 5 (lower is better)
Translates to: DTQPCKPLIRKPAGN*RWSRRAMILPNWCS
Trigger: ACTACACCAGTTTGGCAAAATCATTGCTCTTCGTGACCACCTCCAGTTTCCAGCTGGCTTCCTGATCAAAGGTTTGCACGGTTGAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGGAACCGCTTATCGCTaGGCTTCCCGGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTGTAYR*ASRGRA
Trigger: AGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGATGAATACCGCCGGGTaGGGCTGCGTGGCCGACGGA +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLMNTAG*GCVADG
Trigger: TCCGTCGGCCACGCAGCCCAACCCGGCGGTATTCAT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGTGAGGTCGTGGCTGTaGTGGATGAAGCGCGAGATA +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKVRSWL*WMKREI
Trigger: TATCTCGCGCTTCATCCACAACAGCCACGACCTCAC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFTALLP*DLQALL
Trigger: CAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS GCA 90 bp TCTTTGCTGGGTTTGGCATCCTCTTTCATGGCCGCTTTAGATAATTaGCTTATGCTGCTAATAACATCAGGAACCTGGCTGGGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLLGLASSFMAALDN*LMLLITSGTWLGSV
Trigger: CACAGACCCCAGCCAGGTTCCTGATGTTATTAGCAGCATAAGGCAATTATCTAAAGCGGCCATGAAAGAGGATGCCAAACCCAGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 90 bp TTTGAAATAGTAGAAGGGCCTTCCCCGATGTGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGCCTCAGGTGTAAAATCACAAGTTCA +
Preference number: 5 (lower is better)
Translates to: FEIVEGPSPMCTCVF*LASHSCLRCKITSS
Trigger: TGAACTTGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCACATCGGGGAAGGCCCTTCTACTATTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCCTCCGTCGCGGGTTaGCAGGGTCAGAGGACCACG +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSSVAG*QGQRTT
Trigger: CGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGAGATATGCTGCGCCTaGTGCTCGAAGATGAATACC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLEICCA*CSKMNT
Trigger: GGTATTCATCTTCGAGCACAAGGCGCAGCATATCTC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCGTCCTCATTATCTTaGCTGGGTTTGGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLASSLS*LGLASS
Trigger: AGAGGATGCCAAACCCAGCAAAGATAATGAGGACGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHTALLP*DLQALL
Trigger: CAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCT +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLVNSP*HAGDTA
Trigger: AGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCT +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVLVNSP*HAGDTA
Trigger: AGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATCACCAGCTTGGCTCTaGGTGGGTAGAGACCTTCAA +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKSPAWL*VGRDLQ
Trigger: TTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTGA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAATTCAGCTTTCTCTTaGTGCTTGAAGGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSNSAFS*CLKVGG
Trigger: GCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATT...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGAATTCAGCTTTCTCTTaGTGCTTGAAGGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRNSAFS*CLKVGG
Trigger: GCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATT...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGATTGCTGAGGGAGATTaGTTCATGGGAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGIAEGD*FMGEAT
Trigger: GGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAAT...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGCAGCATTTCAAAGGCTaGCTCTTCACTCATGTGCAG +
Preference number: 5 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRQHFKG*LFTHVQ
Trigger: CTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCTG...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACTTTTCAGTTGGCTATaGGCCCTCTCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKLFSWL*ALSSFS
Trigger: GGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGTTTTGTCTTTTCAGTaGGCTATTGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSVLSFQ*AIGPLQ
Trigger: CTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAAC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACTTCAGGGTCCAGCCTaGGGCCAGCGACATGCAGGC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLLQGPA*GQRHAG
Trigger: GCCTGCATGTCGCTGGCCCAAGGCTGGACCCTGAAG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTCCCCAACAGATTCCTaGGCTACCATCGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADSPTDS*ATIGAS
Trigger: TGATGCACCGATGGTAGCCAAGGAATCTGTTGGGGA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 90 bp TGTGAAGACTTGGAAGACTGGAGGAAGAATTACTCTCCTTGTACATaGGTCGAACTGACGAAAGATTGCTGCACTGTTCACTGGAGCTCT +
Preference number: 5 (lower is better)
Translates to: CEDLEDWRKNYSPCT*VELTKDCCTVHWSS
Trigger: AGAGCTCCAGTGAACAGTGCAGCAATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTCCTCCAGTCTTCCAAGTCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377636.8
ENST00000431480.6
ENST00000488955.1
CDS GCA 90 bp TCTTTGCTGGGTTTGGCATCCTCTTTCATGGCCGCTTTAGATAATTaGCTTATGCTGCTAATAACATCAGGAACCTGGCAAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SLLGLASSFMAALDN*LMLLITSGTWQGPK
Trigger: CTTTGGCCCTTGCCAGGTTCCTGATGTTATTAGCAGCATAAGGCAATTATCTAAAGCGGCCATGAAAGAGGATGCCAAACCCAGCAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAGATATGCTGCGCCTaGTGCTCGAAGATGAATACC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKEICCA*CSKMNT
Trigger: GGTATTCATCTTCGAGCACAAGGCGCAGCATATCTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFLVNSP*HAGDTA
Trigger: AGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCT +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLLVNSP*HAGDTA
Trigger: AGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAGCAAGACTGTaGGACCGTTCAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLSEARL*DRSKLS
Trigger: GGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAGA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCATCTCCTCGTCGACTTTaGGGAACTCCTTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSSPRRL*GTPSLR
Trigger: TCTTAAAGAAGGAGTTCCCAAAAGTCGACGAGGAGA...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACAGCAACAGGTCACAATaGACTAGAGCATCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: HSILLRNTKHRSPACTVHSNRSQ*TRASAG
Trigger: GCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCT...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGGGGGGGTTTCAGATGTTaGTCATCTGTTCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: FHHADLVKQRSSTFLTPGGGFRC*SSVHQS
Trigger: GCTTTGATGAACAGATGACAAACATCTGAAACCCCC...CCCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAA
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS CCA 90 bp GGCACACTGGAATACATAACAAATATACTGGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAAGCCAAAGTGATCCACATGCTTTAT +
Preference number: 5 (lower is better)
Translates to: GTLEYITNILAKSRL*RLPADKAKVIHMLY
Trigger: ATAAAGCATGTGGATCACTTTGGCTTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGCCAGTATATTTGTTATGTATTCCAGTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCTTGAGGGGGCCTTCTaGTGGGTCACGGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFLEGAF*WVTVTF
Trigger: AAAGGTGACCGTGACCCACAAGAAGGCCCCCTCAAG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTACCTTCCACTGCTTGTaGCATTTTCTGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLTFHCL*HFLGLY
Trigger: GTACAATCCCAGAAAATGCAACAAGCAGTGGAAGGT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAATCTGAAGCAAGACTGTaGGACCGTTCAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKSEARL*DRSKLS
Trigger: GGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAGA...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACAGCATTTCAAAGGCTaGCTCTTCACTCATGTGCAG +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKQHFKG*LFTHVQ
Trigger: CTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCTG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCAGGTCTGTACTGCTaGCGGAAGCCGAGGTCATAC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSGLYC*RKPRSY
Trigger: GTATGACCTCGGCTTCCGCAAGCAGTACAGACCTGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTAGGCTGAGTGCAACCTaGAATATAACTTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLRLSAT*NITSVP
Trigger: GGGAACTGAAGTTATATTCAAGGTTGCACTCAGCCT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACCTTTTCAGTTGGCTATaGGCCCTCTCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: HSILLRNTKHRSPACTVHLFSWL*ALSSFS
Trigger: GGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAG...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAAGCAACAGGTCACAATaGACTAGAGCATCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSNRSQ*TRASAG
Trigger: GCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADALLLG*QFRSLS
Trigger: GCTGAGAGACCTAAACTGCAACCCTAACAACAAAGC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTCCTATCTTGGCTTTGTaGTTAGGGTTGCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLPILAL*LGLQFR
Trigger: CCTAAACTGCAACCCTAACAACAAAGCCAAGATAGG...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ACACACTGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: THWVTVRRGFQMFVICSSGLFPI*ALLLGL
Trigger: CAACCCTAACAACAAAGCCAAGATAGGAAATAAGCC...TGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCAGTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp GTTTCACCATGCAGATCTTGTAAAGCAGCGGTCTTCAACCTTCTTGACACCAGGTCCACCTTTTCACCATaGAGTGAAACATGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: VSPCRSCKAAVFNLLDTRSTFSP*SETCCS
Trigger: AGAACAGCATGTTTCACTCAATGGTGAAAAGGTGGA...CCTGGTGTCAAGAAGGTTGAAGACCGCTGCTTTACAAGATCTGCATGGTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACGAAAGTGGCAAATCCTaGTCATTTGGTGACTGTGGC +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADESGKS*SFGDCG
Trigger: GCCACAGTCACCAAATGACAAGGATTTGCCACTTTC...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAATTAGTAGCCCCCAATaGAATGGGGCAGACAGAATC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKISSPQ*NGADRI
Trigger: GATTCTGTCTGCCCCATTCAATTGGGGGCTACTAAT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTGAAGAATTACTCTCCTaGTACATGCGTCGAACTGAC +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLEELLS*YMRRTD
Trigger: GTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTC...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACGCGTCCTCATTATCTTaGCTGGGTTTGGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: HSILLRNTKHRSPACTVHASSLS*LGLASS
Trigger: AGAGGATGCCAAACCCAGCAAAGATAATGAGGACGC...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCTTGAGGGGGCCTTCTaGTGGGTCACGGTCACCTTT +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHLEGAF*WVTVTF
Trigger: AAAGGTGACCGTGACCCACAAGAAGGCCCCCTCAAG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACATCTTGCTGTTGCATaGCTGAGGGAGATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKHLAVA*LREICS
Trigger: TGAACAAATCTCCCTCAGCAATGCAACAGCAAGATG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTCAGCATTTCAAAGGCTaGCTCTTCACTCATGTGCAG +
Preference number: 5 (lower is better)
Translates to: QTILQPPISSNICLSYSPQHFKG*LFTHVQ
Trigger: CTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCTG...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAAGGCTGAGTGCAACCTaGAATATAACTTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKRLSAT*NITSVP
Trigger: GGGAACTGAAGTTATATTCAAGGTTGCACTCAGCCT...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTGTTTTGTCTTTTCAGTaGGCTATTGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QTILQPPISSNICLSYSPVLSFQ*AIGPLQ
Trigger: CTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAAC...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCAGCAACAGGTCACAATaGACTAGAGCATCCGCGGGC +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFSNRSQ*TRASAG
Trigger: GCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCTATCTTGGCTTTGTaGTTAGGGTTGCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKPILAL*LGLQFR
Trigger: CCTAAACTGCAACCCTAACAACAAAGCCAAGATAGG...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCCCCAACAGATTCCTaGGCTACCATCGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSPTDS*ATIGAS
Trigger: TGATGCACCGATGGTAGCCAAGGAATCTGTTGGGGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGAAGAATTACTCTCCTaGTACATGCGTCGAACTGAC +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKEELLS*YMRRTD
Trigger: GTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGAGATATGCTGCGCCTaGTGCTCGAAGATGAATACC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVEICCA*CSKMNT
Trigger: GGTATTCATCTTCGAGCACAAGGCGCAGCATATCTC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS-3UTR CAA 90 bp CATTCGATTCTCTTAAGGAACACAAAACATAGATCTCCTGCATGCACAGTTCACTTATCTTTGCTGGGTTaGGCATCCTCTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: HSILLRNTKHRSPACTVHLSLLG*ASSFMA
Trigger: GGCCATGAAAGAGGATGCCAAACCCAGCAAAGATAA...GTGAACTGTGCATGCAGGAGATCTATGTTTTGTGTTCCTTAAGAGAATCGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAAGTTTAATCTGCGTCTaGGCACTCTGCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLSLICV*ALCRAA
Trigger: GGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATACGTGTGTCTTCTGCTaGGCTTCACACAGCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHTCVFC*ASHSCL
Trigger: GAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGT...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCAGCAGCTTCCGGAGTaGCTCCACTGTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYQQLPE*LHCLLI
Trigger: TATCAAAAGACAGTGGAGCAACTCCGGAAGCTGCTG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TGGGTAACAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: WVTVRRGFQMFVICSSKLFPILA*LLGLQF
Trigger: AAACTGCAACCCTAACAACAAAGCCAAGATAGGAAA...AAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTGTTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGTGCGGAGGGGGTTTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAAGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: QCGGGFRCLSSVHQSFLKGLFPI*ALLLGL
Trigger: CAACCCTAACAACAAAGCCAAGATAGGAAATAAGCC...TTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAAACCCCCTCCGCACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCAACCGTGCAAACCTTaGATCAGGAAGCCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFQPCKP*IRKPAG
Trigger: TCCAGCTGGCTTCCTGATCAAAGGTTTGCACGGTTG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS GCA 90 bp TTATTAGGCAATCTGTGTCTGAGTCGGTACTGTAAAGCCAGAAACTaGCAAATTTCTCCTCGTCGACTTTTGGGAACTCCTTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: LLGNLCLSRYCKARN*QISPRRLLGTPSLR
Trigger: TCTTAAAGAAGGAGTTCCCAAAAGTCGACGAGGAGAAATTTGGCAGTTTCTGGCTTTACAGTACCGACTCAGACACAGATTGCCTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTTATCTTTGCTGGGTTaGGCATCCTCTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYLSLLG*ASSFMA
Trigger: GGCCATGAAAGAGGATGCCAAACCCAGCAAAGATAA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATTATCTTTGCTGGGTTaGGCATCCTCTTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVLSLLG*ASSFMA
Trigger: GGCCATGAAAGAGGATGCCAAACCCAGCAAAGATAA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCGTCCTCATTATCTTaGCTGGGTTTGGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFASSLS*LGLASS
Trigger: AGAGGATGCCAAACCCAGCAAAGATAATGAGGACGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCACCAGCTTGGCTCTaGGTGGGTAGAGACCTTCAA +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSPAWL*VGRDLQ
Trigger: TTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATTCACCAGCTTGGCTCTaGGTGGGTAGAGACCTTCAA +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHSPAWL*VGRDLQ
Trigger: TTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTGA...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCAGGAAATCCAAGCAACAAATCAATTAGTAGCCCCCAATTGAATGGGGCAGACTTCAGAATGTCAAGTTaGAACCTTCCACTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SGNPSNKSISSPQLNGADFRMSS*NLPLLV
Trigger: AACAAGCAGTGGAAGGTTCAAACTTGACATTCTGAA...GTCTGCCCCATTCAATTGGGGGCTACTAATTGATTTGTTGCTTGGATTTCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCTGAAGCAAGACTGTaGGACCGTTCAAAACTGTCC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSEARL*DRSKLS
Trigger: GGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACATTGCTGAGGGAGATTaGTTCATGGGAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYIAEGD*FMGEAT
Trigger: GGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAAT...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGGACAGCTGGTACATTaGAATCTGCAGCGACATCAT +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYGQLVH*NLQRHH
Trigger: ATGATGTCGCTGCAGATTCAAATGTACCAGCTGTCC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTACTTTTCAGTTGGCTATaGGCCCTCTCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLLFSWL*ALSSFS
Trigger: GGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAG...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATCTTTTCAGTTGGCTATaGGCCCTCTCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHLFSWL*ALSSFS
Trigger: GGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAG...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCAGCAGCTTCCGGAGTaGCTCCACTGTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLQQLPE*LHCLLI
Trigger: TATCAAAAGACAGTGGAGCAACTCCGGAAGCTGCTG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCAGCAGCTTCCGGAGTaGCTCCACTGTCTTTTGATA +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFQQLPE*LHCLLI
Trigger: TATCAAAAGACAGTGGAGCAACTCCGGAAGCTGCTG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYALLLG*QFRSLS
Trigger: GCTGAGAGACCTAAACTGCAACCCTAACAACAAAGC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAATTAGTAGCCCCCAATaGAATGGGGCAGACAGAATC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVISSPQ*NGADRI
Trigger: GATTCTGTCTGCCCCATTCAATTGGGGGCTACTAAT...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCCCCAACAGATTCCTaGGCTACCATCGGTGCATCA +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSPTDS*ATIGAS
Trigger: TGATGCACCGATGGTAGCCAAGGAATCTGTTGGGGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGCGTCCTCATTATCTTaGCTGGGTTTGGCATCCTCT +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHASSLS*LGLASS
Trigger: AGAGGATGCCAAACCCAGCAAAGATAATGAGGACGC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACACCTTCCACTGCTTGTaGCATTTTCTGGGATTGTAC +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYTFHCL*HFLGLY
Trigger: GTACAATCCCAGAAAATGCAACAAGCAGTGGAAGGT...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCATTGCTGAGGGAGATTaGTTCATGGGAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFIAEGD*FMGEAT
Trigger: GGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAAT...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTACATCTTGCTGTTGCATaGCTGAGGGAGATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVHLAVA*LREICS
Trigger: TGAACAAATCTCCCTCAGCAATGCAACAGCAAGATG...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACCATCTTGCTGTTGCATaGCTGAGGGAGATTTGTTCA +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYHLAVA*LREICS
Trigger: TGAACAAATCTCCCTCAGCAATGCAACAGCAAGATG...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTCTCCTCGTCGACTTTaGGGAACTCCTTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYSPRRL*GTPSLR
Trigger: TCTTAAAGAAGGAGTTCCCAAAAGTCGACGAGGAGA...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATCTCCTCGTCGACTTTaGGGAACTCCTTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVSPRRL*GTPSLR
Trigger: TCTTAAAGAAGGAGTTCCCAAAAGTCGACGAGGAGA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAACATTCTCCTTTACCTaGAGCTGGGTAGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLTFSFT*SWVDSA
Trigger: GGCTGAGTCTACCCAGCTCAAGGTAAAGGAGAATGT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTAGGGGGTTTCAGATGTTaGTCATCTGTTCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVGGFRC*SSVHQS
Trigger: GCTTTGATGAACAGATGACAAACATCTGAAACCCCC...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGATTAGTAGCCCCCAATaGAATGGGGCAGACAGAATC +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLISSPQ*NGADRI
Trigger: GATTCTGTCTGCCCCATTCAATTGGGGGCTACTAAT...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAAATTCAGCTTTCTCTTaGTGCTTGAAGGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLNSAFS*CLKVGG
Trigger: GCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAATTGCTGAGGGAGATTaGTTCATGGGAGAAGCAACC +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTIAEGD*FMGEAT
Trigger: GGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAAT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTCTCCTCGTCGACTTTaGGGAACTCCTTCTTTAAGA +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLSPRRL*GTPSLR
Trigger: TCTTAAAGAAGGAGTTCCCAAAAGTCGACGAGGAGA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATATGTCAGGAGGCTGTaGTTTATTAGGCAATCTGTG +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVYVRRL*FIRQSV
Trigger: CACAGATTGCCTAATAAACAACAGCCTCCTGACATA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGGACAGCTGGTACATTaGAATCTGCAGCGACATCAT +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHGQLVH*NLQRHH
Trigger: ATGATGTCGCTGCAGATTCAAATGTACCAGCTGTCC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGTTTTGTCTTTTCAGTaGGCTATTGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLVLSFQ*AIGPLQ
Trigger: CTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAAC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLALLLG*QFRSLS
Trigger: GCTGAGAGACCTAAACTGCAACCCTAACAACAAAGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGCCTATCTTGGCTTTGTaGTTAGGGTTGCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLPILAL*LGLQFR
Trigger: CCTAAACTGCAACCCTAACAACAAAGCCAAGATAGG...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCCTATCTTGGCTTTGTaGTTAGGGTTGCAGTTTAGG +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFPILAL*LGLQFR
Trigger: CCTAAACTGCAACCCTAACAACAAAGCCAAGATAGG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TTCAGATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: FRCLSSVHQSFLKPLELYGLFPI*ALLLGL
Trigger: CAACCCTAACAACAAAGCCAAGATAGGAAATAAGCC...GTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACATCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAATTAGTAGCCCCCAATaGAATGGGGCAGACAGAATC +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTISSPQ*NGADRI
Trigger: GATTCTGTCTGCCCCATTCAATTGGGGGCTACTAAT...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAAACTATTCTCCAGCCTCCTATAAGTAGCAATATATGCCTCTCCTACTCTCCTTCCAGTTGGAAAATTTaGTATTTTCTTGTGGCTCTC +
Preference number: 5 (lower is better)
Translates to: QTILQPPISSNICLSYSPSSWKI*YFLVAL
Trigger: GAGAGCCACAAGAAAATACAAAATTTTCCAACTGGA...AGGAGAGTAGGAGAGGCATATATTGCTACTTATAGGAGGCTGGAGAATAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377636.8
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCCGAAGAGCAATGATTTaGCCAAACTGGTGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFRRAMI*PNWCSP
Trigger: AGGACTACACCAGTTTGGCAAAATCATTGCTCTTCG...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS-3UTR CAA 90 bp TATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACACACTGGGTATTCAGAATGTCAAGTTaGAACCTTCCACTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: YGFKGTLSYNKSLYTHWVFRMSS*NLPLLV
Trigger: AACAAGCAGTGGAAGGTTCAAACTTGACATTCTGAA...TACCCAGTGTGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTATGTCAGGAGGCTGTaGTTTATTAGGCAATCTGTG +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFYVRRL*FIRQSV
Trigger: CACAGATTGCCTAATAAACAACAGCCTCCTGACATA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp CAGAGGCACTATCATAGAATCATCTCTGAAAAAGAGAACTGCAAATGTACTTTGTATGTCAGGAGGCTGTaGTTTATTAGGCAATCTGTG +
Preference number: 5 (lower is better)
Translates to: QRHYHRIISEKENCKCTLYVRRL*FIRQSV
Trigger: CACAGATTGCCTAATAAACAACAGCCTCCTGACATA...CAAAGTACATTTGCAGTTCTCTTTTTCAGAGATGATTCTATGATAGTGCCTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACAGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGCAAATCCTTGTCATTaGGTGACTGTGGCACCAAAT +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLANPCH*VTVAPN
Trigger: ATTTGGTGCCACAGTCACCAAATGACAAGGATTTGC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAACAAGCACTCACAATTaGGTGGGAAAGTGGCAAATC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLTSTHN*VGKWQI
Trigger: GATTTGCCACTTTCCCACCAAATTGTGAGTGCTTGT...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTAGGGGGTTTCAGATGTTaGTCATCTGTTCATCAAAGC +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLGGFRC*SSVHQS
Trigger: GCTTTGATGAACAGATGACAAACATCTGAAACCCCC...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATCCCTTCTCCATCACTaGATTCTGAAGCAGTGTCTT +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTSLLHH*ILKQCL
Trigger: AAGACACTGCTTCAGAATCAAGTGATGGAGAAGGGA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS CCA 90 bp TCAACAATATTTTCAAAGCTCTCACATTCCATTATAAGTGTCTCTTaGCTGCTCAGTAGGCTGAGTGCAACCTTGAATATAACTTCAGTT +
Preference number: 5 (lower is better)
Translates to: STIFSKLSHSIISVS*LLSRLSATLNITSV
Trigger: AACTGAAGTTATATTCAAGGTTGCACTCAGCCTACTGAGCAGCCAAGAGACACTTATAATGGAATGTGAGAGCTTTGAAAATATTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp ATGTTTGTCATCTGTTCATCAAAGCTTTCTGAAACCCCTAGAGCTTTACTATTCTTCAGAATGTCAAGTTaGAACCTTCCACTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: MFVICSSKLSETPRALLFFRMSS*NLPLLV
Trigger: AACAAGCAGTGGAAGGTTCAAACTTGACATTCTGAA...GAATAGTAAAGCTCTAGGGGTTTCAGAAAGCTTTGATGAACAGATGACAAACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATGTCAGGAGGCTGTaGTTTATTAGGCAATCTGTG +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLYVRRL*FIRQSV
Trigger: CACAGATTGCCTAATAAACAACAGCCTCCTGACATA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAAGAGAACTGCAAATGTACTTTGAAAATTACTTTCCTTGCCTATACCCAGCATGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTG +
Preference number: 5 (lower is better)
Translates to: KENCKCTLKITFLAYTQHGLFPI*ALLLGL
Trigger: CAACCCTAACAACAAAGCCAAGATAGGAAATAAGCC...ATGCTGGGTATAGGCAAGGAAAGTAATTTTCAAAGTACATTTGCAGTTCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp TCTTTTAAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATTCAGAATGTCAAGTTaGAACCTTCCACTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: SFKKLYGFKGTLSYNKSLFRMSS*NLPLLV
Trigger: AACAAGCAGTGGAAGGTTCAAACTTGACATTCTGAA...TAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS-3UTR CAA 90 bp AAGAAACTGTATGGATTCAAGGGCACACTGAGCTATAACAAGTCATTATATACATTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: KKLYGFKGTLSYNKSLYTFPILA*LLGLQF
Trigger: AAACTGCAACCCTAACAACAAAGCCAAGATAGGAAA...TGTATATAATGACTTGTTATAGCTCAGTGTGCCCTTGAATCCATACAGTTTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp CGCCCGGCGCGGGGACGCAACGCAGGAAGGGCGCGCTaGGCACCAGGATCACCTCTCGGGCCGCCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: RPARGRNAGRAR*APGSPLGPPAP
Trigger: GGGCGCCGGCGGCCCGAGAGGTGATCCTGGTGCTCAGCGCGCCCTTCCTGCGTTGCGTCCCCGCGCCGGGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CAA 90 bp TGGGCTGGCGCCTCGGGCAGGACCTCCCCTTCCTCCGTCGCGGGTTaGCAGGGTCAGAGGACCACGCCGAGGGTCCCCGCGGCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: WAGASGRTSPSSVAG*QGQRTTPRVPAAAG
Trigger: GCCGGCGGCCGCGGGGACCCTCGGCGTGGTCCTCTGACCCTGCAAACCCGCGACGGAGGAAGGGGAGGTCCTGCCCGAGGCGCCAGCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377636.8
CDS CCA 72 bp CTGTGCCAACTGCCGCACCGGGCTCCCGCGCCTGCCTaGGAGCGGCGCGACCCCGAACTCCGCGCTTCAGCA +
Preference number: 6 (lower is better)
Translates to: LCQLPHRAPAPA*ERRDPELRASA
Trigger: TGCTGAAGCGCGGAGTTCGGGGTCGCGCCGCTCCCAGGCAGGCGCGGGAGCCCGGTGCGGCAGTTGGCACAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 72 bp CCGCTTATCGCTTGGCTTCCCGGGGCCGGGCTGAGCTaGGACGCCCGGCTCGGGCTCCAGGGGGTGCGGGAA +
Preference number: 6 (lower is better)
Translates to: PLIAWLPGAGLS*DARLGLQGVRE
Trigger: TTCCCGCACCCCCTGGAGCCCGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 72 bp CGGAACCGCTTATCGCTTGGCTTCCCGGGGCCGGGCTaGGCTGAGACGCCCGGCTCGGGCTCCAGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: RNRLSLGFPGPG*AETPGSGSRGC
Trigger: GCACCCCCTGGAGCCCGAGCCGGGCGTCTCAGCTCAGCCCGGCCCCGGGAAGCCAAGCGATAAGCGGTTCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp CGACCCCGAACTCCGCGCTTCAGCAGCCCTGCCCCATaGAGCACTTCCACGGGCGCGGCTCGGAGGCTCCGG +
Preference number: 6 (lower is better)
Translates to: RPRTPRFSSPAP*STSTGAARRLR
Trigger: CCGGAGCCTCCGAGCCGCGCCCGTGGAAGTGCTGCATGGGGCAGGGCTGCTGAAGCGCGGAGTTCGGGGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp AGCGGCGCGACCCCGAACTCCGCGCTTCAGCAGCCCTaGCCCATGCAGCACTTCCACGGGCGCGGCTCGGAG +
Preference number: 6 (lower is better)
Translates to: SGATPNSALQQP*PMQHFHGRGSE
Trigger: CTCCGAGCCGCGCCCGTGGAAGTGCTGCATGGGGCAGGGCTGCTGAAGCGCGGAGTTCGGGGTCGCGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp GAAACTGTGCCAACTGCCGCACCGGGCTCCCGCGCCTaGCTGGGAGCGGCGCGACCCCGAACTCCGCGCTTC +
Preference number: 6 (lower is better)
Translates to: ETVPTAAPGSRA*LGAARPRTPRF
Trigger: GAAGCGCGGAGTTCGGGGTCGCGCCGCTCCCAGGCAGGCGCGGGAGCCCGGTGCGGCAGTTGGCACAGTTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp GGCTGGCCCCGGCAGGTAAGCCAAGGTGGGTGTCGGTaGCGTCAGCCTCCTCCGGCAGGCAGTCTCCGGGGG +
Preference number: 6 (lower is better)
Translates to: GWPRQVSQGGCR*RQPPPAGSLRG
Trigger: CCCCCGGAGACTGCCTGCCGGAGGAGGCTGACGGCACCGACACCCACCTTGGCTTACCTGCCGGGGCCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp CAAGCGCCCGGCAGGCGAGGGCGGGTTAAATGGGCATCCTCCTCCTaGGGCTGGCGCCTCGGGCAGGACCTCCCCTTCCTCCGTCGCGGG +
Preference number: 6 (lower is better)
Translates to: QAPGRRGRVKWASSS*GWRLGQDLPFLRRG
Trigger: CCCGCGACGGAGGAAGGGGAGGTCCTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCGCCTGCCGGGCGCTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 72 bp CCGAGGCAAGCGCCCGGCAGGCGAGGGCGGGTTAAATaGGCATCCTCCTCCTTGGGCTGGCGCCTCGGGCAG +
Preference number: 6 (lower is better)
Translates to: PRQAPGRRGRVK*ASSSLGWRLGQ
Trigger: CTGCCCGAGGCGCCAGCCCAAGGAGGAGGATGCCCATTTAACCCGCCCTCGCCTGCCGGGCGCTTGCCTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CCA 72 bp AGGGCAGGCTGGCTGGCCCCGGCAGGTAAGCCAAGGTaGGTGTCGGTGCCGTCAGCCTCCTCCGGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: RAGWLAPAGKPR*VSVPSASSGRQ
Trigger: CTGCCTGCCGGAGGAGGCTGACGGCACCGACACCCACCTTGGCTTACCTGCCGGGGCCAGCCAGCCTGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp GGCTCGGGCTCCAGGGGGTGCGGGAACGGCTCATCCTaGATGCAGCTGGGCGGCTCCATAACTCTCGCCTCA +
Preference number: 6 (lower is better)
Translates to: GSGSRGCGNGSS*MQLGGSITLAS
Trigger: TGAGGCGAGAGTTATGGAGCCGCCCAGCTGCATTCAGGATGAGCCGTTCCCGCACCCCCTGGAGCCCGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS TCA 72 bp ATGGTCCTGTTCTTCTCCGAGTCCGAGGGCTGGACGTaGCTGGGTGCGCTCGCGTGTCTCCGTCGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: MVLFFSESEGWT*LGALACLRRGW
Trigger: CCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAACAGGACCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp AAGTCAGCCAGGTCCTCTCCTGGGTCCGGACCGCGCTaGTCCCCTTGGATCTTCAGGCGCTGCTGTTCGTGC +
Preference number: 6 (lower is better)
Translates to: KSARSSPGSGPR*SPWIFRRCCSC
Trigger: GCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCTGACTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp GTTCTTCTCCGAGTCCGAGGGCTGGACGTGACTGGGTaGGCTCGCGTGTCTCCGTCGCGGCTGGGATTTCTG +
Preference number: 6 (lower is better)
Translates to: VLLRVRGLDVTG*ARVSPSRLGFL
Trigger: CAGAAATCCCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp AGGTCCTCTCCTGGGTCCGGACCGCGCTGCTCCCCTTaGATCTTCAGGCGCTGCTGTTCGTGCAGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RSSPGSGPRCSP*IFRRCCSCRLN
Trigger: GTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp CTTCCAAAATCCGCTCAGGGAAGCAGACCCGAGAGCTaGTCAGGGCAGGCTGGCTGGCCCCGGCAGGTAAGC +
Preference number: 6 (lower is better)
Translates to: LPKSAQGSRPES*SGQAGWPRQVS
Trigger: GCTTACCTGCCGGGGCCAGCCAGCCTGCCCTGACCAGCTCTCGGGTCTGCTTCCCTGAGCGGATTTTGGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp TCCTGTTCTTCTCCGAGTCCGAGGGCTGGACGTGACTaGGTGCGCTCGCGTGTCTCCGTCGCGGCTGGGATT +
Preference number: 6 (lower is better)
Translates to: SCSSPSPRAGRD*VRSRVSVAAGI
Trigger: AATCCCAGCCGCGACGGAGACACGCGAGCGCACCCAGTCACGTCCAGCCCTCGGACTCGGAGAAGAACAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp CAGGTCCTCTCCTGGGTCCGGACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTGTTCGTGCAGGCTGAA +
Preference number: 6 (lower is better)
Translates to: QVLSWVRTALLP*DLQALLFVQAE
Trigger: TTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp TGTCTCCGTCGCGGCTGGGATTTCTGGCTGCCCTCGTaGACTCTCCGTTGCACGCCGGTGACACTGCTGCAC +
Preference number: 6 (lower is better)
Translates to: CLRRGWDFWLPS*TLRCTPVTLLH
Trigger: GTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp GGAGTCGGAATCCTCTTCGGGAAACGTTTGCCAAGCTaGGGACGGTGGGGACGCTGGCGGTGTCCCTGGTGG +
Preference number: 6 (lower is better)
Translates to: GVGILFGKRLPS*GRWGRWRCPWW
Trigger: CCACCAGGGACACCGCCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGAGGATTCCGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp TCTCCGTCGCGGCTGGGATTTCTGGCTGCCCTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCTGCACCGAGACCGAAACTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SPSRLGFLAALVNSP*HAGDTAAPRPKLLL
Trigger: CAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGCCGCGACGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp CAAGTCAGCCAGGTCCTCTCCTGGGTCCGGACCGCGCTGCTCCCCTaGGATCTTCAGGCGCTGCTGTTCGTGCAGGCTGAACTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: QVSQVLSWVRTALLP*DLQALLFVQAELLH
Trigger: ATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCGCGGTCCGGACCCAGGAGAGGACCTGGCTGACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp TCTGGCTGCCCTCGTGAACTCTCCGTTGCACGCCGGTaGCACTGCTGCACCGAGACCGAAACTCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SGCPRELSVARR*HCCTETETPAA
Trigger: AGCAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp AACTGCGGGGAGTCGGAATCCTCTTCGGGAAACGTTTaGCAAGCTGAGGACGGTGGGGACGCTGGCGGTGTC +
Preference number: 6 (lower is better)
Translates to: NCGESESSSGNV*QAEDGGDAGGV
Trigger: GACACCGCCAGCGTCCCCACCGTCCTCAGCTTGGCAAACGTTTCCCGAAGAGGATTCCGACTCCCCGCAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp CGGCTGGGATTTCTGGCTGCCCTCGTGAACTCTCCGTaGCACGCCGGTGACACTGCTGCACCGAGACCGAAA +
Preference number: 6 (lower is better)
Translates to: RLGFLAALVNSP*HAGDTAAPRPK
Trigger: TTTCGGTCTCGGTGCAGCAGTGTCACCGGCGTGCAACGGAGAGTTCACGAGGGCAGCCAGAAATCCCAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp GTGAGGTCGTGGCTGTTGTGGATGAAGCGCGAGATATGCTGCGCCTaGTGCTCGAAGATGAATACCGCCGGGTTGGGCTGCGTGGCCGAC +
Preference number: 6 (lower is better)
Translates to: VRSWLLWMKREICCA*CSKMNTAGLGCVAD
Trigger: GTCGGCCACGCAGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAGCCACGACCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CAA 72 bp TGCATCGGGCAGGCCTCACACAGTTTAATCTGCGTCTaGGCACTCTGCAGGGCAGCCGCCGTACTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: CIGQASHSLICV*ALCRAAAVLKA
Trigger: GGCCTTCAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGAGGCCTGCCCGATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp GGAAAATGCGCTGCCGCCAGGAGATCCGGCGAGGAGTaGCAGAGGTTCCTCCCACACTTAGGGACTCATTGC +
Preference number: 6 (lower is better)
Translates to: GKCAAARRSGEE*QRFLPHLGTHC
Trigger: GCAATGAGTCCCTAAGTGTGGGAGGAACCTCTGTCACTCCTCGCCGGATCTCCTGGCGGCAGCGCATTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000488955.1
ENST00000493487.1
ENST00000648194.1
CDS GCA 72 bp GGTGGGTGGCTGAACGTGTGTGCCCGTCTTCGAAACTaGGGGGAGTCGGAATCCTCTTCGGGAAACGTTTGC +
Preference number: 6 (lower is better)
Translates to: GGWLNVCARLRN*GESESSSGNVC
Trigger: GCAAACGTTTCCCGAAGAGGATTCCGACTCCCCGCAGTTTCGAAGACGGGCACACACGTTCAGCCACCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp CTGTTGTGGATGAAGCGCGAGATATGCTGCGCCTTGTaGTCGAAGATGAATACCGCCGGGTTGGGCTGCGTG +
Preference number: 6 (lower is better)
Translates to: LLWMKREICCAL*SKMNTAGLGCV
Trigger: CACGCAGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp GTGAGGTCGTGGCTGTTGTGGATGAAGCGCGAGATATaGTGCGCCTTGTGCTCGAAGATGAATACCGCCGGG +
Preference number: 6 (lower is better)
Translates to: VRSWLLWMKREI*CALCSKMNTAG
Trigger: CCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAGCCACGACCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp CGCTGCTCCCCTTGGATCTTCAGGCGCTGCTGTTCGTaGAGGCTGAACTTCTCCATGCAGTCATCGATGAGG +
Preference number: 6 (lower is better)
Translates to: RCSPWIFRRCCS*RLNFSMQSSMR
Trigger: CCTCATCGATGACTGCATGGAGAAGTTCAGCCTGCACGAACAGCAGCGCCTGAAGATCCAAGGGGAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp AAAGAGTGCATCGGGCAGGCCTCACACAGTTTAATCTaGGTCTTGGCACTCTGCAGGGCAGCCGCCGTACTG +
Preference number: 6 (lower is better)
Translates to: KECIGQASHSLI*VLALCRAAAVL
Trigger: CAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGAGGCCTGCCCGATGCACTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp TGGCTGTTGTGGATGAAGCGCGAGATATGCTGCGCCTaGTGCTCGAAGATGAATACCGCCGGGTTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: WLLWMKREICCA*CSKMNTAGLGC
Trigger: GCAGCCCAACCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS CAA 90 bp TGCAAAGAGTGCATCGGGCAGGCCTCACACAGTTTAATCTGCGTCTaGGCACTCTGCAGGGCAGCCGCCGTACTGAAGGCCTGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: CKECIGQASHSLICV*ALCRAAAVLKACFR
Trigger: TCTGAAACAGGCCTTCAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGAGGCCTGCCCGATGCACTCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp TTGCTGAGGGAGATTTGTTCATGGGAGAAGCAACCCTaGGGAAAATGCGCTGCCGCCAGGAGATCCGGCGAG +
Preference number: 6 (lower is better)
Translates to: LLREICSWEKQP*GKCAAARRSGE
Trigger: CTCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000493487.1
ENST00000648194.1
CDS GCA 72 bp AGGTCGTGGCTGTTGTGGATGAAGCGCGAGATATGCTaGGCCTTGTGCTCGAAGATGAATACCGCCGGGTTG +
Preference number: 6 (lower is better)
Translates to: RSWLLWMKREIC*ALCSKMNTAGL
Trigger: CAACCCGGCGGTATTCATCTTCGAGCACAAGGCGCAGCATATCTCGCGCTTCATCCACAACAGCCACGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
CDS GCA 72 bp CAGGCCTCACACAGTTTAATCTGCGTCTTGGCACTCTaGAGGGCAGCCGCCGTACTGAAGGCCTGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: QASHSLICVLAL*RAAAVLKACFR
Trigger: TCTGAAACAGGCCTTCAGTACGGCGGCTGCCCTGCAGAGTGCCAAGACGCAGATTAAACTGTGTGAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp TTGTTCATGGGAGAAGCAACCCTGAGGAAAATGCGCTaGCGCCAGGAGATCCGGCGAGGAGTGACAGAGGTT +
Preference number: 6 (lower is better)
Translates to: LFMGEATLRKMR*RQEIRRGVTEV
Trigger: AACCTCTGTCACTCCTCGCCGGATCTCCTGGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCATGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000493487.1
ENST00000648194.1
CDS GCA 72 bp ACGCCGGTGACACTGCTGCACCGAGACCGAAACTCCTaGTGCTCATCAAAGCCAGAATCTTCCAAAATCCGC +
Preference number: 6 (lower is better)
Translates to: TPVTLLHRDRNS*CSSKPESSKIR
Trigger: GCGGATTTTGGAAGATTCTGGCTTTGATGAGCAGCAGGAGTTTCGGTCTCGGTGCAGCAGTGTCACCGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp ATGCAGTCATCGATGAGGCTTGAGGGGGCCTTCTTGTaGGTCACGGTCACCTTTCCACAGTACAGGACTTCG +
Preference number: 6 (lower is better)
Translates to: MQSSMRLEGAFL*VTVTFPQYRTS
Trigger: CGAAGTCCTGTACTGTGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTCAAGCCTCATCGATGACTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp TCCATGCAGTCATCGATGAGGCTTGAGGGGGCCTTCTaGTGGGTCACGGTCACCTTTCCACAGTACAGGACT +
Preference number: 6 (lower is better)
Translates to: SMQSSMRLEGAF*WVTVTFPQYRT
Trigger: AGTCCTGTACTGTGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp GGGTTGCAGTTTAGGTCTCTCAGCAACAGGTCACAATaGACTAGAGCATCCGCGGGCAGCAGCTTCCGGAGT +
Preference number: 6 (lower is better)
Translates to: GLQFRSLSNRSQ*TRASAGSSFRS
Trigger: ACTCCGGAAGCTGCTGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp GGTTGCAGTTTAGGTCTCTCAGCAACAGGTCACAATTaGCTAGAGCATCCGCGGGCAGCAGCTTCCGGAGTT +
Preference number: 6 (lower is better)
Translates to: GCSLGLSATGHN*LEHPRAAASGV
Trigger: AACTCCGGAAGCTGCTGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp GTAGAAGGGCCTTCCCCGATGTGCACGTGTGTCTTCTaGTTGGCTTCACACAGCTGCCTCAGGTGTAAAATC +
Preference number: 6 (lower is better)
Translates to: VEGPSPMCTCVF*LASHSCLRCKI
Trigger: GATTTTACACCTGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCACATCGGGGAAGGCCCTTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp CTGAACTTCTCCATGCAGTCATCGATGAGGCTTGAGGGGGCCTTCTaGTGGGTCACGGTCACCTTTCCACAGTACAGGACTTCGAACTTC +
Preference number: 6 (lower is better)
Translates to: LNFSMQSSMRLEGAF*WVTVTFPQYRTSNF
Trigger: GAAGTTCGAAGTCCTGTACTGTGGAAAGGTGACCGTGACCCACAAGAAGGCCCCCTCAAGCCTCATCGATGACTGCATGGAGAAGTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp AATTCAGCTTTCTCTTTGTGCTTGAAGGTGGGTGGCTaGACGTGTGTGCCCGTCTTCGAAACTGCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: NSAFSLCLKVGG*TCVPVFETAGS
Trigger: ACTCCCCGCAGTTTCGAAGACGGGCACACACGTTCAGCCACCCACCTTCAAGCACAAAGAGAAAGCTGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp CCCCTGGTGAGTAGTCCTTCTCTGAAGCAAGACTGTTaGACCGTTCAAAACTGTCCACACTTCCAAGCCGAC +
Preference number: 6 (lower is better)
Translates to: PLVSSPSLKQDC*TVQNCPHFQAD
Trigger: GTCGGCTTGGAAGTGTGGACAGTTTTGAACGGTCCAACAGTCTTGCTTCAGAGAAGGACTACTCACCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp TCGTTCCTGTCCAATCCATCTTGCTGTTGCATTGCTGAGGGAGATTaGTTCATGGGAGAAGCAACCCTGAGGAAAATGCGCTGCCGCCAG +
Preference number: 6 (lower is better)
Translates to: SFLSNPSCCCIAEGD*FMGEATLRKMRCRQ
Trigger: CTGGCGGCAGCGCATTTTCCTCAGGGTTGCTTCTCCCATGAACAAATCTCCCTCAGCAATGCAACAGCAAGATGGATTGGACAGGAACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000493487.1
ENST00000648194.1
CDS CAA 90 bp TTGTTGTTAGGGTTGCAGTTTAGGTCTCTCAGCAACAGGTCACAATaGACTAGAGCATCCGCGGGCAGCAGCTTCCGGAGTTGCTCCACT +
Preference number: 6 (lower is better)
Translates to: LLLGLQFRSLSNRSQ*TRASAGSSFRSCST
Trigger: AGTGGAGCAACTCCGGAAGCTGCTGCCCGCGGATGCTCTAGTCAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp GTACTATTTGAAATAGTAGAAGGGCCTTCCCCGATGTaGACGTGTGTCTTCTGCTTGGCTTCACACAGCTGC +
Preference number: 6 (lower is better)
Translates to: VLFEIVEGPSPM*TCVFCLASHSC
Trigger: GCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCACATCGGGGAAGGCCCTTCTACTATTTCAAATAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp CCGTGCAAACCTTTGATCAGGAAGCCAGCTGGAAACTaGAGGTGGTCACGAAGAGCAATGATTTTGCCAAAC +
Preference number: 6 (lower is better)
Translates to: PCKPLIRKPAGN*RWSRRAMILPN
Trigger: GTTTGGCAAAATCATTGCTCTTCGTGACCACCTCCAGTTTCCAGCTGGCTTCCTGATCAAAGGTTTGCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS CAA 72 bp GTGATGAGAGATGCCTCTGTATCACCAGCTTGGCTCTaGGTGGGTAGAGACCTTCAATCCTTTCACAGAGCT +
Preference number: 6 (lower is better)
Translates to: VMRDASVSPAWL*VGRDLQSFHRA
Trigger: AGCTCTGTGAAAGGATTGAAGGTCTCTACCCACCAAGAGCCAAGCTGGTGATACAGAGGCATCTCTCATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp GGAGGAAGAATTACTCTCCTTGTACATGCGTCGAACTaGCGAAAGATTGCTGCACTGTTCACTGGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: GGRITLLVHASN*RKIAALFTGAL
Trigger: CAGAGCTCCAGTGAACAGTGCAGCAATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377636.8
ENST00000431480.6
ENST00000488955.1
CDS TCA 72 bp AGCCAGCTGGAAACTGGAGGTGGTCACGAAGAGCAATaGTTTTGCCAAACTGGTGTAGTCCTCAGTATTAGC +
Preference number: 6 (lower is better)
Translates to: SQLETGGGHEEQ*FCQTGVVLSIS
Trigger: GCTAATACTGAGGACTACACCAGTTTGGCAAAATCATTGCTCTTCGTGACCACCTCCAGTTTCCAGCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648194.1
CDS CAA 90 bp GAAATAGTAGAAGGGCCTTCCCCGATGTGCACGTGTGTCTTCTGCTaGGCTTCACACAGCTGCCTCAGGTGTAAAATCACAAGTTCATTT +
Preference number: 6 (lower is better)
Translates to: EIVEGPSPMCTCVFC*ASHSCLRCKITSSF
Trigger: AAATGAACTTGTGATTTTACACCTGAGGCAGCTGTGTGAAGCCAAGCAGAAGACACACGTGCACATCGGGGAAGGCCCTTCTACTATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp AGGTCATACATGAGGAATTTCAGCATTTCAAAGGCTTaGTCTTCACTCATGTGCAGAAGCAGGACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: RSYMRNFSISKA*SSLMCRSRTPA
Trigger: GGCTGGAGTCCTGCTTCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCTGAAATTCCTCATGTATGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000478591.1
ENST00000648194.1
CDS CCA 72 bp AAGGGGCAGAGAAGGAAGTGTGAAGACTTGGAAGACTaGAGGAAGAATTACTCTCCTTGTACATGCGTCGAA +
Preference number: 6 (lower is better)
Translates to: KGQRRKCEDLED*RKNYSPCTCVE
Trigger: TTCGACGCATGTACAAGGAGAGTAATTCTTCCTCCAGTCTTCCAAGTCTTCACACTTCCTTCTCTGCCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377636.8
ENST00000431480.6
ENST00000488955.1
CDS CAA 72 bp GAGGTCATACATGAGGAATTTCAGCATTTCAAAGGCTaGCTCTTCACTCATGTGCAGAAGCAGGACTCCAGC +
Preference number: 6 (lower is better)
Translates to: EVIHEEFQHFKG*LFTHVQKQDSS
Trigger: GCTGGAGTCCTGCTTCTGCACATGAGTGAAGAGCAAGCCTTTGAAATGCTGAAATTCCTCATGTATGACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000478591.1
ENST00000648194.1
CDS CAA 90 bp CTGAGGCCGTGCCTCTTCAATTATGGCTTATTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTTAGGTCTCTCAGCAACAGGTCACAA +
Preference number: 6 (lower is better)
Translates to: LRPCLFNYGLFPILA*LLGLQFRSLSNRSQ
Trigger: TTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAGGCACGGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp TTTCTGCTGAGGCCGTGCCTCTTCAATTATGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTGCAGTTTAGGTCTCTCAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: FLLRPCLFNYGLFPI*ALLLGLQFRSLSNR
Trigger: CCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAGGCACGGCCTCAGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS GCA 72 bp TTGGAAGACTGGAGGAAGAATTACTCTCCTTGTACATaGGTCGAACTGACGAAAGATTGCTGCACTGTTCAC +
Preference number: 6 (lower is better)
Translates to: LEDWRKNYSPCT*VELTKDCCTVH
Trigger: GTGAACAGTGCAGCAATCTTTCGTCAGTTCGACGCATGTACAAGGAGAGTAATTCTTCCTCCAGTCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377636.8
ENST00000431480.6
ENST00000488955.1
CDS CCA 72 bp GAATACATAACAAATATACTGGCTAAGTCCAGGCTCTaGAGACTCCCGGCAGATAAAGCCAAAGTGATCCAC +
Preference number: 6 (lower is better)
Translates to: EYITNILAKSRL*RLPADKAKVIH
Trigger: GTGGATCACTTTGGCTTTATCTGCCGGGAGTCTCCAGAGCCTGGACTTAGCCAGTATATTTGTTATGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CCA 72 bp CTAGGAGGTCCATGTTTTGTCTTTTCAGTTGGCTATTaGCCCTCTCCAGCTTCTCCAAAGTTTCACTATCCT +
Preference number: 6 (lower is better)
Translates to: LGGPCFVFSVGY*PSPASPKFHYP
Trigger: AGGATAGTGAAACTTTGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAACATGGACCTCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp TCTAGGAGGTCCATGTTTTGTCTTTTCAGTTGGCTATaGGCCCTCTCCAGCTTCTCCAAAGTTTCACTATCC +
Preference number: 6 (lower is better)
Translates to: SRRSMFCLFSWL*ALSSFSKVSLS
Trigger: GGATAGTGAAACTTTGGAGAAGCTGGAGAGGGCCAATAGCCAACTGAAAAGACAAAACATGGACCTCCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp AGGCCGTGCCTCTTCAATTATGGCTTATTTCCTATCTTGGCTTTGTaGTTAGGGTTGCAGTTTAGGTCTCTCAGCAACAGGTCACAATTG +
Preference number: 6 (lower is better)
Translates to: RPCLFNYGLFPILAL*LGLQFRSLSNRSQL
Trigger: CAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAGGCACGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp AGGCCGTGCCTCTTCAATTATGGCTTATTTCCTATCTaGGCTTTGTTGTTAGGGTTGCAGTTTAGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RPCLFNYGLFPI*ALLLGLQFRSL
Trigger: GAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAGGCACGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp TATGGCTTATTTCCTATCTTGGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGCAACAGGTCACAATTG +
Preference number: 6 (lower is better)
Translates to: YGLFPILALLLG*QFRSLSNRSQL
Trigger: CAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 72 bp TGCCTCTTCAATTATGGCTTATTTCCTATCTTGGCTTaGTTGTTAGGGTTGCAGTTTAGGTCTCTCAGCAAC +
Preference number: 6 (lower is better)
Translates to: CLFNYGLFPILA*LLGLQFRSLSN
Trigger: GTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp CTCTTCAATTATGGCTTATTTCCTATCTTGGCTTTGTTGTTAGGGTaGCAGTTTAGGTCTCTCAGCAACAGGTCACAATTGACTAGAGCA +
Preference number: 6 (lower is better)
Translates to: LFNYGLFPILALLLG*QFRSLSNRSQLTRA
Trigger: TGCTCTAGTCAATTGTGACCTGTTGCTGAGAGACCTAAACTGCAACCCTAACAACAAAGCCAAGATAGGAAATAAGCCATAATTGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS TCA 72 bp CGTCGACTTTTGGGAACTCCTTCTTTAAGAAGAGTATaGATATCTTCCATATCACATCTGATTTTAGCTCTG +
Preference number: 6 (lower is better)
Translates to: RRLLGTPSLRRV*ISSISHLILAL
Trigger: CAGAGCTAAAATCAGATGTGATATGGAAGATATTCATACTCTTCTTAAAGAAGGAGTTCCCAAAAGTCGACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000431480.6
ENST00000648194.1
CDS CAA 90 bp GAGCTAGTTAAGGATCTCTTAGCTTTATTTTTCAGAATGTCAAGTTaGAACCTTCCACTGCTTGTTGCATTTTCTGGGATTGTACTATTT +
Preference number: 6 (lower is better)
Translates to: ELVKDLLALFFRMSS*NLPLLVAFSGIVLF
Trigger: AAATAGTACAATCCCAGAAAATGCAACAAGCAGTGGAAGGTTCAAACTTGACATTCTGAAAAATAAAGCTAAGAGATCCTTAACTAGCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377625.6
ENST00000377636.8
ENST00000413735.1
ENST00000431480.6
ENST00000648194.1