RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D32 (Homo sapiens)

Ensembl gene IDs: ENSG00000146350

Ensembl transcript IDs: ENST00000275159.10, ENST00000368464.7, ENST00000398197.6, ENST00000398212.7, ENST00000422369.1, ENST00000464622.5, ENST00000509492.2, ENST00000523345.1

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTaGGGCTCAAATCCGCTAAGATTGCCCATAGTGAGTGGCTTATTT +
Preference number: 1 (lower is better)
Translates to: KKMMNSGILSPGFRS*GSNPLRLPIVSGLF
Trigger: AAATAAGCCACTCACTATGGGCAATCTTAGCGGATTTGAGCCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 90 bp GACAAAGTAATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTaGCTTCAGAAGCTGAGGCTCAAATCCGCTAAGATTGCCCATAGT +
Preference number: 1 (lower is better)
Translates to: DKVMKENDELWDSVS*LQKLRLKSAKIAHS
Trigger: ACTATGGGCAATCTTAGCGGATTTGAGCCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCATTACTTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR GCA 90 bp ACACAAGAGGCAACTCAGCCTTCAGTAGCATTTCAATATAATGGGTaGTGCAAAAATATACTGGATGGATGCCAGATTCTACAGTGTCAT +
Preference number: 1 (lower is better)
Translates to: TQEATQPSVAFQYNG*CKNILDGCQILQCH
Trigger: ATGACACTGTAGAATCTGGCATCCATCCAGTATATTTTTGCAGCACCCATTATATTGAAATGCTACTGAAGGCTGAGTTGCCTCTTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 90 bp AGCCCTTCTTCTACAGATGCAATTCTTGCCAAAATACCAGCTATATaGATTAAAGCTGTCTCAGAGCAATTTGGAGATGCCTCATTTCCT +
Preference number: 1 (lower is better)
Translates to: SPSSTDAILAKIPAI*IKAVSEQFGDASFP
Trigger: AGGAAATGAGGCATCTCCAAATTGCTCTGAGACAGCTTTAATTCATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAGAAGAAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 90 bp CAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTaGAGAAACAGAATCAGAACCCTCTACTGGAGTAGGAATTCTTTC +
Preference number: 1 (lower is better)
Translates to: QIIFPSHNVLGFLAY*RNRIRTLYWSRNSF
Trigger: GAAAGAATTCCTACTCCAGTAGAGGGTTCTGATTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 90 bp ATCCGTTCCAATGGCCCACCAACAAGATTTATTCTAACAAGAACATaGTTTCTCTCCACTGATAAGCCATCAATTATAAAGTCCCTGTGG +
Preference number: 1 (lower is better)
Translates to: IRSNGPPTRFILTRT*FLSTDKPSIIKSLW
Trigger: CCACAGGGACTTTATAATTGATGGCTTATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 90 bp TTTGCCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATaGAAGACTTTCATTCTTCACATTTGCATCAGTAGCTGTATACTC +
Preference number: 1 (lower is better)
Translates to: FAIPDSHFNAKLLHR*KTFILHICISSCIL
Trigger: GAGTATACAGCTACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
3UTR GCA 90 bp AGACTGAGGAATTTGCCATACCTGACAGTCATTTTAATGCCAAGCTaGTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTA +
Preference number: 1 (lower is better)
Translates to: RLRNLPYLTVILMPS*CTDERLSFFTFASV
Trigger: TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGGCAAATTCCTCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
3UTR TCA 90 bp CAATGTTGTTATATAAGCATTCCACTGCACATTCTTTTTGATCACTaGGTATCCACAGAACTTCAGTCACCATACTTGCAGGAGAGTAAT +
Preference number: 1 (lower is better)
Translates to: QCCYISIPLHILFDH*VSTELQSPYLQESN
Trigger: ATTACTCTCCTGCAAGTATGGTGACTGAAGTTCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTGGAATGCTTATATAACAACATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 90 bp ACCTTTGACCATATGTGGAGAACCAAGGAACATAATGAAGTTGGTTaGTTGCTCCTAAGTTCAGTGGACAAAGTAATGAAAGAAAATGAT +
Preference number: 1 (lower is better)
Translates to: TFDHMWRTKEHNEVG*LLLSSVDKVMKEND
Trigger: ATCATTTTCTTTCATTACTTTGTCCACTGAACTTAGGAGCAACCAACCAACTTCATTATGTTCCTTGGTTCTCCACATATGGTCAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACATGGTCTCGATCTCTTaGCCTCGTGATCCGCCCACC +
Preference number: 2 (lower is better)
Translates to: GTTGASLHPANFSIVSRDMVSIS*PRDPPT
Trigger: GGTGGGCGGATCACGAGGTCAAGAGATCGAGACCAT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
3UTR-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCTCACCTCTTTAGGTTaGCCAGGATCCAACTGGTCT +
Preference number: 2 (lower is better)
Translates to: VAGTTGASLHPANFSIVSLTSLG*PGSNWS
Trigger: AGACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCCATTTTGGCCAGGATaGTCTCGATCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: GTTGASLHPANFSIVSRDPFWPG*SRSLDL
Trigger: GAGGTCAAGAGATCGAGACCATCCTGGCCAAAATGG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
3UTR-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTaGCCAGGATGGTCTCGATCT +
Preference number: 2 (lower is better)
Translates to: GTTGASLHPANFSIVSRDEVSPF*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
3UTR-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTCCAATTTTCACAGTTaGGGACATCAGATGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GTTGASLHPANFSIVSRDSNFHS*GHQMEE
Trigger: CTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGCACAGGATCAGGATCTaGAAGAGACACGGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: MKENDELWDSVSWLQKLRHRIRI*KRHGQF
Trigger: AAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTG...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTGGAGTAGTTCTGGGATaGGTTACCCTAACATCATCT +
Preference number: 2 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFGVVLG*VTLTSS
Trigger: AGATGATGTTAGGGTAACCCATCCCAGAACTACTCC...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 90 bp AGAGACACGGTCAGTTTTTCGCAGAGAGTAGTCCAATTTTCACAGTaGAGGACATCAGATGGAGGAGCTGAACATAATGTTTGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RDTVSFSQRVVQFSQ*RTSDGGAEHNVCKA
Trigger: AGCCTTGCAAACATTATGTTCAGCTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGACTACTCTCTGCGAAAAACTGACCGTGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGCATGCATCCACTTTTTaGACCACACAGCCTTGGTAT +
Preference number: 2 (lower is better)
Translates to: MKENDELWDSVSWLQKLRHASTF*TTQPWY
Trigger: ATACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATG...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCAGAGTCTCACTCTGTaGCCTGGCTGGAGTACAGTG +
Preference number: 2 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSQSLTL*PGWSTV
Trigger: CACTGTACTCCAGCCAGGCCACAGAGTGAGACTCTG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
3UTR-3UTR TCA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTATATACTTCTCTGGATaGCGAATCCAGAAAGATGGA +
Preference number: 2 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFIYFSG*RIQKDG
Trigger: TCCATCTTTCTGGATTCGTCATCCAGAGAAGTATAT...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTAGCTGTATACTCCACTaGAGGGAAGTAGCATTCAGA +
Preference number: 2 (lower is better)
Translates to: HGQHNSLAGREEKILWKFSCILH*REVAFR
Trigger: TCTGAATGCTACTTCCCTTCAGTGGAGTATACAGCT...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
3UTR-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCCATTTTGGCCAGGATaGTCTCGATCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIPFWPG*SRSLDL
Trigger: GAGGTCAAGAGATCGAGACCATCCTGGCCAAAATGG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
3UTR-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTGAGGTTTCACCATTTTaGCCAGGATGGTCTCGATCT +
Preference number: 2 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIEVSPF*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTC...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
3UTR-3UTR CCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCAATTATAAAGTCCCTGTaGCTCTCAGAAATCTCCAAG +
Preference number: 2 (lower is better)
Translates to: PYLTVILMPSCCTDERLSIIKSL*LSEISK
Trigger: CTTGGAGATTTCTGAGAGCCACAGGGACTTTATAAT...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCACAAAATCCGTTCCAATaGCCCACCAACAAGATTTAT +
Preference number: 2 (lower is better)
Translates to: PYLTVILMPSCCTDERLSQNPFQ*PTNKIY
Trigger: ATAAATCTTGTTGGTGGGCCATTGGAACGGATTTTG...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCAATTTCTTGTAATGTCTaGCAGATAGCAGTTTGGCAA +
Preference number: 2 (lower is better)
Translates to: PYLTVILMPSCCTDERLSISCNV*QIAVWQ
Trigger: TTGCCAAACTGCTATCTGTCAGACATTACAAGAAAT...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCAAATAAAAAGAGCCATTaGCCCAAAAAGTGGTCTAGA +
Preference number: 2 (lower is better)
Translates to: PYLTVILMPSCCTDERLSNKKSH*PKKWSR
Trigger: TCTAGACCACTTTTTGGGTCAATGGCTCTTTTTATT...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR GCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGACTTGTCTTTTTCCATaGCTTTGCTATAGATTCATG +
Preference number: 2 (lower is better)
Translates to: MKENDELWDSVSWLQKLRTCLFP*LCYRFM
Trigger: CATGAATCTATAGCAAAGGCATGGAAAAAGACAAGT...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTTGCCCAGGATCCAACTaGTCTAAAATCAATTGTAAT +
Preference number: 2 (lower is better)
Translates to: HGQHNSLAGREEKILWKFCPGSN*SKINCN
Trigger: ATTACAATTGATTTTAGACCAGTTGGATCCTGGGCA...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 90 bp CAGTCTAATGTTCCGCATGTCTCTCAGCAGCACTGTTCGGTAGTTTaGTTCCAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAA +
Preference number: 2 (lower is better)
Translates to: QSNVPHVSQQHCSVV*FQNFHVFKIITHSK
Trigger: TTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTGGAACAAAACTACCGAACAGTGCTGCTGAGAGACATGCGGAACATTAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR GCA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTCAGAGCAATTGTCTGTaGGGTAACTATGGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTQSNCL*GNYGFS
Trigger: AGAAAAGCCATAGTTACCGCACAGACAATTGCTCTG...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CCA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCGAAGTAGTAATCCTTTaGGGGTGGCAGCAAAATGTA +
Preference number: 2 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFEVVIL*GWQQNV
Trigger: TACATTTTGCTGCCACCCCCAAAGGATTACTACTTC...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR TCA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCCTTTGGACAACTTGGTaGGTAATAGATAAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFLWTTW*VIDKLG
Trigger: ACCCAACTTATCTATTACTCACCAAGTTGTCCAAAG...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 90 bp GTTCTGGGATGGGTTACCCTAACATCATCTCTTCCATATTCCAGATaGGACCATAATTCAGTTATAAGTTCATTAATAAACCCTGACTTT +
Preference number: 2 (lower is better)
Translates to: VLGWVTLTSSLPYSR*DHNSVISSLINPDF
Trigger: AAAGTCAGGGTTTATTAATGAACTTATAACTGAATTATGGTCCAATCTGGAATATGGAAGAGATGATGTTAGGGTAACCCATCCCAGAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 90 bp TTTGACCATATGTGGAGAACCAAGGAACATAATGAAGTTGGTTGGTaGCTCCTAAGTTCAGTGGACAAAGTAATGAAAGAAAATGATGAA +
Preference number: 2 (lower is better)
Translates to: FDHMWRTKEHNEVGW*LLSSVDKVMKENDE
Trigger: TTCATCATTTTCTTTCATTACTTTGTCCACTGAACTTAGGAGCAACCAACCAACTTCATTATGTTCCTTGGTTCTCCACATATGGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR GCA 90 bp GAAGTCTTACAGAAATATGTAGCCTTGGCAACCAAAGAAAAGCAGAAGTCAGAATTCATTCTTCACATTTaGATCAGTAGCTGTATACTC +
Preference number: 2 (lower is better)
Translates to: EVLQKYVALATKEKQKSEFILHI*ISSCIL
Trigger: GAGTATACAGCTACTGATGCAAATGTGAAGAATGAA...TTCTGACTTCTGCTTTTCTTTGGTTGCCAAGGCTACATATTTCTGTAAGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
3UTR TCA 72 bp ATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTaGGGCTCAAATCCGCTAAGATTGCCCATAGTGAGT +
Preference number: 3 (lower is better)
Translates to: MNSGILSPGFRS*GSNPLRLPIVS
Trigger: ACTCACTATGGGCAATCTTAGCGGATTTGAGCCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATCTCACCTCTTTAGGTaGCCCAGGATCCAACTGGTC +
Preference number: 3 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPSHLFR*PRIQLV
Trigger: GACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAGA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR GCA 72 bp TTGAGGACATCAGATGGAGGAGCTGAACATAATGTTTaGAAGGCTTCATATCTCACCTCTTTAGGTTGCCCA +
Preference number: 3 (lower is better)
Translates to: LRTSDGGAEHNV*KASYLTSLGCP
Trigger: TGGGCAACCTAAAGAGGTGAGATATGAAGCCTTGCAAACATTATGTTCAGCTCCTCCATCTGATGTCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp ATTTCACTTTTGACAGCTTCGGTCAATAGGATCCACTaGAGTAGTTCTGGGATGGGTTACCCTAACATCATC +
Preference number: 3 (lower is better)
Translates to: ISLLTASVNRIH*SSSGMGYPNII
Trigger: GATGATGTTAGGGTAACCCATCCCAGAACTACTCCAGTGGATCCTATTGACCGAAGCTGTCAAAAGTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGTCATCTTCTTCAAACTaGTTAATCATAGACTCGACC +
Preference number: 3 (lower is better)
Translates to: EKIQTSHGQHNSLAGREESSSSN*LIIDST
Trigger: GGTCGAGTCTATGATTAACAAGTTTGAAGAAGATGA...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTaGCTTCAGAAGCTGAGGCTCAAATCCGCTAAGATT +
Preference number: 3 (lower is better)
Translates to: MKENDELWDSVS*LQKLRLKSAKI
Trigger: AATCTTAGCGGATTTGAGCCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp CTGAGGCTCAAATCCGCTAAGATTGCCCATAGTGAGTaGCTTATTTCCTTAGACCAAAGATATGTGATTGTT +
Preference number: 3 (lower is better)
Translates to: LRLKSAKIAHSE*LISLDQRYVIV
Trigger: AACAATCACATATCTTTGGTCTAAGGAAATAAGCCACTCACTATGGGCAATCTTAGCGGATTTGAGCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CAA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATGTTTCTGCAATGCTTaGAATGTCCCAAAGTTTCAT +
Preference number: 3 (lower is better)
Translates to: PYLTVILMPSCCTDERLSCFCNA*NVPKFH
Trigger: ATGAAACTTTGGGACATTCAAAGCATTGCAGAAACA...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 72 bp TATATAAGCATTCCACTGCACATTCTTTTTGATCACTaGGTATCCACAGAACTTCAGTCACCATACTTGCAG +
Preference number: 3 (lower is better)
Translates to: YISIPLHILFDH*VSTELQSPYLQ
Trigger: CTGCAAGTATGGTGACTGAAGTTCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTGGAATGCTTATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 72 bp TCTACAGATGCAATTCTTGCCAAAATACCAGCTATATaGATTAAAGCTGTCTCAGAGCAATTTGGAGATGCC +
Preference number: 3 (lower is better)
Translates to: STDAILAKIPAI*IKAVSEQFGDA
Trigger: GGCATCTCCAAATTGCTCTGAGACAGCTTTAATTCATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp AAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTaGCTTACTGAAGAAACAGAATCAGAACCCTCTACT +
Preference number: 3 (lower is better)
Translates to: KLSSQAIMFWDS*LTEETESEPST
Trigger: AGTAGAGGGTTCTGATTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp CATATGTGGAGAACCAAGGAACATAATGAAGTTGGTTaGTTGCTCCTAAGTTCAGTGGACAAAGTAATGAAA +
Preference number: 3 (lower is better)
Translates to: HMWRTKEHNEVG*LLLSSVDKVMK
Trigger: TTTCATTACTTTGTCCACTGAACTTAGGAGCAACCAACCAACTTCATTATGTTCCTTGGTTCTCCACATATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCAGCTAATTTCAGTATaGTTAGCAGAGACGAGGTTT +
Preference number: 3 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSQLISV*LAETRF
Trigger: AAACCTCGTCTCTGCTAACAATACTGAAATTAGCTG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
3UTR-3UTR CAA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCCAGAAGCCTGGAGAATaGATGAAGAAATTGGAATGT +
Preference number: 3 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFQKPGE*MKKLEC
Trigger: ACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTG...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 72 bp ATGTTGTTATATAAGCATTCCACTGCACATTCTTTTTaGTCACTGAGTATCCACAGAACTTCAGTCACCATA +
Preference number: 3 (lower is better)
Translates to: MLLYKHSTAHSF*SLSIHRTSVTI
Trigger: TATGGTGACTGAAGTTCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTGGAATGCTTATATAACAACAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CCA 72 bp CACCTGTTCTTTGAAGAAGTAGTAATCCTTTGGGGGTaGCAGCAAAATGTAGTAAATCATCTAACAAATTAT +
Preference number: 3 (lower is better)
Translates to: HLFFEEVVILWG*QQNVVNHLTNY
Trigger: ATAATTTGTTAGATGATTTACTACATTTTGCTGCCACCCCCAAAGGATTACTACTTCTTCAAAGAACAGGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR TCA 72 bp AATGGCCCACCAACAAGATTTATTCTAACAAGAACATaGTTTCTCTCCACTGATAAGCCATCAATTATAAAG +
Preference number: 3 (lower is better)
Translates to: NGPPTRFILTRT*FLSTDKPSIIK
Trigger: CTTTATAATTGATGGCTTATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSRLSIA*SIAWSS
Trigger: CGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDRLSIA*SIAWSS
Trigger: CGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCG +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREERLSIA*SIAWSS
Trigger: CGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCGCCACCTGCTGCTGTTaGTGCCACTCGTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSATCCC*CHSCNQ
Trigger: TTGGTTACACGAGTGGCATCAACAGCAGCAGGTGGC...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSACSIA*SSLEKW
Trigger: CCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRACSIA*SSLEKW
Trigger: CCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGC...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGGGAAGGGGCACCCGTaGTTTTCTCCTTCACGCTCT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSGKGHP*FSPSRS
Trigger: AGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAGGGAAGGGGCACCCGTaGTTTTCTCCTTCACGCTCT +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRGKGHP*FSPSRS
Trigger: AGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCC...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCACAGGATCAGGATCTaGAAGAGACACGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDHRIRI*KRHGQF
Trigger: AAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGCCACCTGCTGCTGTTaGTGCCACTCGTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPATCCC*CHSCNQ
Trigger: TTGGTTACACGAGTGGCATCAACAGCAGCAGGTGGC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACAAACCGTGTGTCTCATaGTCTATGTGCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDKPCVS*SMCSAV
Trigger: GACTGCAGAGCACATAGATCATGAGACACACGGTTT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCGTCAATAGGATCCACTaGAGTAGTTCTGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSVNRIH*SSSGMG
Trigger: ACCCATCCCAGAACTACTCCAGTGGATCCTATTGAC...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACAGAGTCTCACTCTGTaGCCTGGCTGGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPQSLTL*PGWSTV
Trigger: CACTGTACTCCAGCCAGGCCACAGAGTGAGACTCTG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
3UTR CAA 72 bp CTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATaGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LQAHHCTQLISV*LAETRFHHFGQ
Trigger: CTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTCCGCATTCTTCACCCTaGTTCCGATCAGATGTGCAT +
Preference number: 4 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFPHSSP*FRSDVH
Trigger: ATGCACATCTGATCGGAATCAGGGTGAAGAATGCGG...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCATGCATCCACTTTTTaGACCACACAGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSHASTF*TTQPWY
Trigger: ATACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGCTGTATACTCCACTaGAGGGAAGTAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSSCILH*REVAFR
Trigger: TCTGAATGCTACTTCCCTTCAGTGGAGTATACAGCT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCTTGCAGGCAAATCTGTaGTGGTGCAAAACCAGACAT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSLQANL*WCKTRH
Trigger: ATGTCTGGTTTTGCACCATCACAGATTTGCCTGCAA...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGACTCACCTCTTTAGGTTaGCCAGGATCCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRLTSLG*PGSNWS
Trigger: AGACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAG...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCACTGGGTTATCCATTaGAGGCAAATCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDHWVIH*RQICDG
Trigger: ACCATCACAGATTTGCCTGCAATGGATAACCCAGTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCTCACTCGAAACCCATaGAGTGCTTCTTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSLTRNP*SASSFR
Trigger: CCTAAAAGAAGAAGCACTGCATGGGTTTCGAGTGAG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCTCACTCGAAACCCATaGAGTGCTTCTTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDLTRNP*SASSFR
Trigger: CCTAAAAGAAGAAGCACTGCATGGGTTTCGAGTGAG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATTCTCCTTCACGCTCTaGAACAACCGCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPFSFTL*NNRLSI
Trigger: GATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGGAGTAGTTCTGGGATaGGTTACCCTAACATCATCT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDGVVLG*VTLTSS
Trigger: AGATGATGTTAGGGTAACCCATCCCAGAACTACTCC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTCAGAGTCTCACTCTGTaGCCTGGCTGGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFQSLTL*PGWSTV
Trigger: CACTGTACTCCAGCCAGGCCACAGAGTGAGACTCTG...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTCCTCGCTGGAGAAATaGGCCATCCTGTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSSSLEK*AILLES
Trigger: TGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACCGCATTCTTCACCCTaGTTCCGATCAGATGTGCAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPPHSSP*FRSDVH
Trigger: ATGCACATCTGATCGGAATCAGGGTGAAGAATGCGG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCACAGGATCAGGATCTaGAAGAGACACGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSHRIRI*KRHGQF
Trigger: AAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAACTGGGCAATTATATaGGCACCTGTAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSNWAII*APVGLS
Trigger: AGAAAGTCCTACAGGTGCTCATATAATTGCCCAGTT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp ATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTAGCCACCTGCTGCTGTTaGTGCCACTCGTGTAACCAA +
Preference number: 4 (lower is better)
Translates to: MPSCCTDERLSFFTFASVATCCC*CHSCNQ
Trigger: TTGGTTACACGAGTGGCATCAACAGCAGCAGGTGGC...TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCTTAAGGCCTCTCCACTaGTTATATCAGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSLRPLH*LYQVWL
Trigger: AAGCCAAACCTGATATAATCAGTGGAGAGGCCTTAA...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAAGCTGCTGCACAGATaGAAGACTTTCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSKLLHR*KTFILH
Trigger: GTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACAAGCTGCTGCACAGATaGAAGACTTTCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDKLLHR*KTFILH
Trigger: GTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTAAACCGTGTGTCTCATaGTCTATGTGCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSKPCVS*SMCSAV
Trigger: GACTGCAGAGCACATAGATCATGAGACACACGGTTT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCAGAGCAATTGTCTGTaGGGTAACTATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDQSNCL*GNYGFS
Trigger: AGAAAAGCCATAGTTACCGCACAGACAATTGCTCTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACTCACCTCTTTAGGTTaGCCAGGATCCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLTSLG*PGSNWS
Trigger: AGACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACATGATCTATGTGCTCTaGAGTCTAATGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDMIYVL*SLMFRM
Trigger: CATGCGGAACATTAGACTGCAGAGCACATAGATCAT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGG +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIACSIA*SSLEKW
Trigger: CCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGC...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGTCAATAGGATCCACTaGAGTAGTTCTGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSVNRIH*SSSGMG
Trigger: ACCCATCCCAGAACTACTCCAGTGGATCCTATTGAC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTGTCAATAGGATCCACTaGAGTAGTTCTGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFVNRIH*SSSGMG
Trigger: ACCCATCCCAGAACTACTCCAGTGGATCCTATTGAC...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCGAAGTAGCATTCAGATaGGCTTTCAGTGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSEVAFR*AFSEMK
Trigger: CTTCATCTCACTGAAAGCCCATCTGAATGCTACTTC...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGAGGTTTCACCATTTTaGCCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSEVSPF*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTAATGGGCCATCCTGTTaGAATCAAACGTCCACTCTC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSNGPSC*NQTSTL
Trigger: GAGAGTGGACGTTTGATTCCAACAGGATGGCCCATT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTGGGAAGGGGCACCCGTaGTTTTCTCCTTCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIGKGHP*FSPSRS
Trigger: AGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCC...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTCCAATTTTCACAGTTaGGGACATCAGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSSNFHS*GHQMEE
Trigger: CTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACACAGGATCAGGATCTaGAAGAGACACGGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPHRIRI*KRHGQF
Trigger: AAACTGACCGTGTCTCTTTCAGATCCTGATCCTGTG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGTTTCTGCAATGCTTTaGATGTCCCAAAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDVSAML*MSQSFI
Trigger: GATGAAACTTTGGGACATTCAAAGCATTGCAGAAAC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCTTTGGACAACTTGGTaGGTAATAGATAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSLWTTW*VIDKLG
Trigger: ACCCAACTTATCTATTACTCACCAAGTTGTCCAAAG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACACTGCACATTCTTTTTaGTCACTGAGTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDTAHSF*SLSIHR
Trigger: TCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGTTAAGGCCTCTCCACTaGTTATATCAGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREELRPLH*LYQVWL
Trigger: AAGCCAAACCTGATATAATCAGTGGAGAGGCCTTAA...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCGGGCTTTCAGTGAGATaGAGCACAAATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSGLSVR*STNFSS
Trigger: ACTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCC...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGGGCTTTCAGTGAGATaGAGCACAAATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDGLSVR*STNFSS
Trigger: ACTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCAGATGGGCTTTCAGTaGGATGAAGCACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDQMGFQ*DEAQIF
Trigger: AAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCAGATGGGCTTTCAGTaGGATGAAGCACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSQMGFQ*DEAQIF
Trigger: AAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGCAAAACCAGACATGTaGAAAGCTGAAAACACAAGA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDAKPDM*KAENTR
Trigger: TCTTGTGTTTTCAGCTTTTCACATGTCTGGTTTTGC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGATATTTCACTTTTaGCAGCTTCGGTCAATAGGA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDEIFHF*QLRSIG
Trigger: TCCTATTGACCGAAGCTGTCAAAAGTGAAATATCTC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTTAATGCCAAGCTGCTaGACAGATGAAAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDLMPSC*TDERLS
Trigger: TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCAAGCCATAATGTTTTaGGATTCCTGGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDQAIMF*DSWLTE
Trigger: TTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGTAATCCTTTGGGGGTaGCAGCAAAATGTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDVILWG*QQNVVN
Trigger: ATTTACTACATTTTGCTGCCACCCCCAAAGGATTAC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGGAGTAGTTCTGGGATaGGTTACCCTAACATCATCT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSGVVLG*VTLTSS
Trigger: AGATGATGTTAGGGTAACCCATCCCAGAACTACTCC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCATTATAAAGTCCCTGTaGCTCTCAGAAATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSIIKSL*LSEISK
Trigger: CTTGGAGATTTCTGAGAGCCACAGGGACTTTATAAT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCATTGGCCAAGGATATaGATTATCACTCTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDHWPRI*IITLFE
Trigger: CTCGAAAAGAGTGATAATCCATATCCTTGGCCAATG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGCTGCAAAAATATACTaGATGGATGCCAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDAAKIY*MDARFY
Trigger: GTAGAATCTGGCATCCATCCAGTATATTTTTGCAGC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTCCATTTTGGCCAGGATaGTCTCGATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFPFWPG*SRSLDL
Trigger: GAGGTCAAGAGATCGAGACCATCCTGGCCAAAATGG...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTTCGCCTGGTCCTCGCTaGAGAAATGGGCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSSPGPR*RNGPSC
Trigger: ACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGA...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCTCGCCTGGTCCTCGCTaGAGAAATGGGCCATCCTGT +
Preference number: 4 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFSPGPR*RNGPSC
Trigger: ACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGA...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCAGAGACACAGAATATaGTATTCTTGTTCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDQRHRI*YSCSLA
Trigger: GGCCAAAGAACAAGAATACCATATTCTGTGTCTCTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTACTCTTTAGATTCTTaGGTTCTTTTAGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDYSLDS*VLLVTC
Trigger: GCAGGTCACTAAAAGAACTCAAGAATCTAAAGAGTA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCGATGGAGCTTCTTTCTaGTATTCATTTAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSDGASF*YSFRRR
Trigger: TCGTCTTCTAAATGAATATCAGAAAGAAGCTCCATC...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAACTGGGCAATTATATaGGCACCTGTAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRNWAII*APVGLS
Trigger: AGAAAGTCCTACAGGTGCTCATATAATTGCCCAGTT...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCATAGCACCTGTTCTTTaGAGAAGTAGTAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSIAPVL*RSSNPL
Trigger: CAAAGGATTACTACTTCTTCAAAGAACAGGTGCTAT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACATAGCACCTGTTCTTTaGAGAAGTAGTAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDIAPVL*RSSNPL
Trigger: CAAAGGATTACTACTTCTTCAAAGAACAGGTGCTAT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAAGCTGTATACTCCACTaGAGGGAAGTAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPSCILH*REVAFR
Trigger: TCTGAATGCTACTTCCCTTCAGTGGAGTATACAGCT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATTGCAGGCAAATCTGTaGTGGTGCAAAACCAGACAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLQANL*WCKTRH
Trigger: ATGTCTGGTTTTGCACCATCACAGATTTGCCTGCAA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGTTGCAGGCAAATCTGTaGTGGTGCAAAACCAGACAT +
Preference number: 4 (lower is better)
Translates to: MKENDELWDSVSWLQKLRLQANL*WCKTRH
Trigger: ATGTCTGGTTTTGCACCATCACAGATTTGCCTGCAA...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAAAGATCATTGTTCACTaGACGCTGCATAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPKIIVH*TLHSSR
Trigger: TCTGGAGCTATGCAGCGTTCAGTGAACAATGATCTT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGACGTATGAGGGTAGAATaGATGAATTTCTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRRMRVE*MNFFLQ
Trigger: CTGCAGGAAGAAATTCATTCATTCTACCCTCATACG...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTGGAGCACCTCTCCACTaGTTATATCAGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFGAPLH*LYQVWL
Trigger: AAGCCAAACCTGATATAATCAGTGGAGAGGTGCTCC...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCTTTTCTGCTTGTTTCTaGAATGCTTTGAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSFSACF*NALNVP
Trigger: TGGGACATTCAAAGCATTGCAGAAACAAGCAGAAAA...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACATTTTAATGCCAAGCTaGTGCACAGATGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDILMPS*CTDERL
Trigger: AAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAAT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACAGGAATCTCTCACAATaGTTTAAAACCCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDRNLSQ*FKTQVR
Trigger: TCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTTTATGGAAGTTTGCTaGTGTTTCAGGAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDFMEVC*CFRNLS
Trigger: TGAGAGATTCCTGAAACAGCAGCAAACTTCCATAAA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGATTTTATGGAAGTTTaGTGCTGTTTCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDDFMEV*CCFRNL
Trigger: GAGATTCCTGAAACAGCAGCAAACTTCCATAAAATC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACACTGGGTTATCCATTaGAGGCAAATCTGTGATGGT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPHWVIH*RQICDG
Trigger: ACCATCACAGATTTGCCTGCAATGGATAACCCAGTG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTGCCCAGGATCCAACTaGTCTAAAATCAATTGTAAT +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDCPGSN*SKINCN
Trigger: ATTACAATTGATTTTAGACCAGTTGGATCCTGGGCA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACACGAATCCAGAAAGATaGAGCTTCTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDTNPER*SFFLIF
Trigger: GAATATCAGAAAGAAGCTCCATCTTTCTGGATTCGT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTTCCATATACTTCTCTaGATGACGAATCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTTGASLHPANFSIVSRDFHILL*MTNPER
Trigger: TCTTTCTGGATTCGTCATCCAGAGAAGTATATGGAA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGAAGTAGTAATCCTTTaGGGGTGGCAGCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSEVVIL*GWQQNV
Trigger: TACATTTTGCTGCCACCCCCAAAGGATTACTACTTC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCAAAATCCGTTCCAATaGCCCACCAACAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEQNPFQ*PTNKIY
Trigger: ATAAATCTTGTTGGTGGGCCATTGGAACGGATTTTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCAGAGTCTCACTCTGTaGCCTGGCTGGAGTACAGTG +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIQSLTL*PGWSTV
Trigger: CACTGTACTCCAGCCAGGCCACAGAGTGAGACTCTG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTGCCTATATGCTGCCTaGGGTATTTCACAAATTCAT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSCLYAA*GISQIH
Trigger: ATGAATTTGTGAAATACCTCAGGCAGCATATAGGCA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTATATACTTCTCTGGATaGCGAATCCAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSIYFSG*RIQKDG
Trigger: TCCATCTTTCTGGATTCGTCATCCAGAGAAGTATAT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTGTTTCTGCAATGCTTTaGATGTCCCAAAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFVSAML*MSQSFI
Trigger: GATGAAACTTTGGGACATTCAAAGCATTGCAGAAAC...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGAACAAGCAGATCTATaGGGGATACCAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSEQADL*GIPNLF
Trigger: AAAAAGGTTTGGTATCCCTCATAGATCTGCTTGTTC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGACTTTGGACAACTTGGTaGGTAATAGATAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRLWTTW*VIDKLG
Trigger: ACCCAACTTATCTATTACTCACCAAGTTGTCCAAAG...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAAACTGGGCAATTATATaGGCACCTGTAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPNWAII*APVGLS
Trigger: AGAAAGTCCTACAGGTGCTCATATAATTGCCCAGTT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATTAAGGCCTCTCCACTaGTTATATCAGGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLRPLH*LYQVWL
Trigger: AAGCCAAACCTGATATAATCAGTGGAGAGGCCTTAA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCAGATGGGCTTTCAGTaGGATGAAGCACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSQMGFQ*DEAQIF
Trigger: AAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCTCCCAACATTATCATaGACAGAGAAGATACAAACC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSLPTLS*TEKIQT
Trigger: GGTTTGTATCTTCTCTGTTCATGATAATGTTGGGAG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGTTCTGCTATAATGTaGATGCATCCACTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSSSAIM*MHPLFE
Trigger: TTCAAAAAGTGGATGCATGCACATTATAGCAGAACT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCTACAGATGCAATTCTTaGCAAAATACCAGCTATATG +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSYRCNS*QNTSYM
Trigger: CATATAGCTGGTATTTTGGCAAGAATTGCATCTGTA...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCTTCATTCTTCACATTTaGATCAGTAGCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSFILHI*ISSCIL
Trigger: GAGTATACAGCTACTGATGCAAATGTGAAGAATGAA...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGTTTATGGAAGTTTGCTaGTGTTTCAGGAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEFMEVC*CFRNLS
Trigger: TGAGAGATTCCTGAAACAGCAGCAAACTTCCATAAA...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGGATTTTATGGAAGTTTaGTGCTGTTTCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEDFMEV*CCFRNL
Trigger: GAGATTCCTGAAACAGCAGCAAACTTCCATAAAATC...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAATATACTGGATGGATaGCAGATTCTACAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREENILDG*QILQCH
Trigger: ATGACACTGTAGAATCTGGCATCCATCCAGTATATT...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAGGCCAAGTTTTCTTTaGGAAGTAGTTGTTGTAATC +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREERPSFL*EVVVVI
Trigger: GATTACAACAACTACTTCGCAAAGAAAACTTGGCCT...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTTTCTCCTTCACGCTCTaGAACAACCGCCTCAGCATC +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSFSFTL*NNRLSI
Trigger: GATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAA...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGTAATCCTTTGGGGGTaGCAGCAAAATGTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSVILWG*QQNVVN
Trigger: ATTTACTACATTTTGCTGCCACCCCCAAAGGATTAC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGAAGTAGTAATCCTTTaGGGGTGGCAGCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPEVVIL*GWQQNV
Trigger: TACATTTTGCTGCCACCCCCAAAGGATTACTACTTC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCATCAATAACACATGTTaGGACTTCACGAAGAGAATA +
Preference number: 4 (lower is better)
Translates to: VAGTTGASLHPANFSIVSINNTC*DFTKRI
Trigger: TATTCTCTTCGTGAAGTCCCAACATGTGTTATTGAT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCAAAATCCGTTCCAATaGCCCACCAACAAGATTTAT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSQNPFQ*PTNKIY
Trigger: ATAAATCTTGTTGGTGGGCCATTGGAACGGATTTTG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGCTGCAAAAATATACTaGATGGATGCCAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSAAKIY*MDARFY
Trigger: GTAGAATCTGGCATCCATCCAGTATATTTTTGCAGC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGGAGGTTTCACCATTTTaGCCAGGATGGTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKEVSPF*PGWSRS
Trigger: AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTC...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATGCCTATATGCTGCCTaGGGTATTTCACAAATTCAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPCLYAA*GISQIH
Trigger: ATGAATTTGTGAAATACCTCAGGCAGCATATAGGCA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCCGCATTCTTCACCCTaGTTCCGATCAGATGTGCAT +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSPHSSP*FRSDVH
Trigger: ATGCACATCTGATCGGAATCAGGGTGAAGAATGCGG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp ATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTATCCAATTTTCACAGTTaGGGACATCAGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MPSCCTDERLSFFTFASVSNFHS*GHQMEE
Trigger: CTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGA...TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGATGGAGCTTCTTTCTaGTATTCATTTAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSDGASF*YSFRRR
Trigger: TCGTCTTCTAAATGAATATCAGAAAGAAGCTCCATC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCCATGCATCCACTTTTTaGACCACACAGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LTVILMPSCCTDERLSFFHASTF*TTQPWY
Trigger: ATACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATG...GAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGTTTCTGCAATGCTTTaGATGTCCCAAAGTTTCATC +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPVSAML*MSQSFI
Trigger: GATGAAACTTTGGGACATTCAAAGCATTGCAGAAAC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGGCTTTCAGTGAGATaGAGCACAAATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPGLSVR*STNFSS
Trigger: ACTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGAGCTGTATACTCCACTaGAGGGAAGTAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKSCILH*REVAFR
Trigger: TCTGAATGCTACTTCCCTTCAGTGGAGTATACAGCT...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACTCCCAACATTATCATaGACAGAGAAGATACAAACC +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLPTLS*TEKIQT
Trigger: GGTTTGTATCTTCTCTGTTCATGATAATGTTGGGAG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGCAAAACCAGACATGTaGAAAGCTGAAAACACAAGA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPAKPDM*KAENTR
Trigger: TCTTGTGTTTTCAGCTTTTCACATGTCTGGTTTTGC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGAGAACCAGACATACTaGGATATTTCACTTTTGACA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSENQTY*DISLLT
Trigger: TGTCAAAAGTGAAATATCTCAGTATGTCTGGTTCTC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCTCACCTCTTTAGGTTaGCCAGGATCCAACTGGTCT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIILTSLG*PGSNWS
Trigger: AGACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR GCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTTTTCTGCTTGTTTCTaGAATGCTTTGAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSFSACF*NALNVP
Trigger: TGGGACATTCAAAGCATTGCAGAAACAAGCAGAAAA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGTTCATTCTTCACATTTaGATCAGTAGCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEFILHI*ISSCIL
Trigger: GAGTATACAGCTACTGATGCAAATGTGAAGAATGAA...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATTAATGCCAAGCTGCTaGACAGATGAAAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLMPSC*TDERLS
Trigger: TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTAGGAATCTCTCACAATaGTTTAAAACCCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSRNLSQ*FKTQVR
Trigger: TCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGGAATCTCTCACAATaGTTTAAAACCCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRRNLSQ*FKTQVR
Trigger: TCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCT...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTGCCCAGGATCCAACTaGTCTAAAATCAATTGTAAT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSCPGSN*SKINCN
Trigger: ATTACAATTGATTTTAGACCAGTTGGATCCTGGGCA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTACGAATCCAGAAAGATaGAGCTTCTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSTNPER*SFFLIF
Trigger: GAATATCAGAAAGAAGCTCCATCTTTCTGGATTCGT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTTCCATATACTTCTCTaGATGACGAATCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSFHILL*MTNPER
Trigger: TCTTTCTGGATTCGTCATCCAGAGAAGTATATGGAA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCGGAGTAGTTCTGGGATaGGTTACCCTAACATCATCT +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVGVVLG*VTLTSS
Trigger: AGATGATGTTAGGGTAACCCATCCCAGAACTACTCC...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAATTATAAAGTCCCTGTaGCTCTCAGAAATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPIIKSL*LSEISK
Trigger: CTTGGAGATTTCTGAGAGCCACAGGGACTTTATAAT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACATTGGCCAAGGATATaGATTATCACTCTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPHWPRI*IITLFE
Trigger: CTCGAAAAGAGTGATAATCCATATCCTTGGCCAATG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCAGAAGTAGCATTCAGATaGGCTTTCAGTGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: PYLTVILMPSCCTDERLSEVAFR*AFSEMK
Trigger: CTTCATCTCACTGAAAGCCCATCTGAATGCTACTTC...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTGAAGTAGCATTCAGATaGGCTTTCAGTGAGATGAAG +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFEVAFR*AFSEMK
Trigger: CTTCATCTCACTGAAAGCCCATCTGAATGCTACTTC...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGGCTGCAAAAATATACTaGATGGATGCCAGATTCTAC +
Preference number: 4 (lower is better)
Translates to: MKENDELWDSVSWLQKLRAAKIY*MDARFY
Trigger: GTAGAATCTGGCATCCATCCAGTATATTTTTGCAGC...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCCATTTTGGCCAGGATaGTCTCGATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSPFWPG*SRSLDL
Trigger: GAGGTCAAGAGATCGAGACCATCCTGGCCAAAATGG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTTCCTCGCTGGAGAAATaGGCCATCCTGTTGGAATCA +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIISSLEK*AILLES
Trigger: TGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGA...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp AGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAACCTTTGACCATATGTaGAGAACCAAGGAACATAAT +
Preference number: 4 (lower is better)
Translates to: RRYKPVMASIIPLQAEKRTFDHM*RTKEHN
Trigger: ATTATGTTCCTTGGTTCTCCACATATGGTCAAAGGT...TCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 72 bp GTCAGTTTTTCGCAGAGAGTAGTCCAATTTTCACAGTaGAGGACATCAGATGGAGGAGCTGAACATAATGTT +
Preference number: 4 (lower is better)
Translates to: VSFSQRVVQFSQ*RTSDGGAEHNV
Trigger: AACATTATGTTCAGCTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGACTACTCTCTGCGAAAAACTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATACTCTTTAGATTCTTaGGTTCTTTTAGTGACCTGC +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPYSLDS*VLLVTC
Trigger: GCAGGTCACTAAAAGAACTCAAGAATCTAAAGAGTA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR TCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAATTTCTTGTAATGTCTaGCAGATAGCAGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPISCNV*QIAVWQ
Trigger: TTGCCAAACTGCTATCTGTCAGACATTACAAGAAAT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR TCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTGGGCTTTCAGTGAGATaGAGCACAAATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFGLSVR*STNFSS
Trigger: ACTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCC...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR TCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTCAGATGGGCTTTCAGTaGGATGAAGCACAAATTTTT +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFQMGFQ*DEAQIF
Trigger: AAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTG...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR TCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGAAGCTGCTGCACAGATaGAAGACTTTCATTCTTCAC +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKKLLHR*KTFILH
Trigger: GTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTT...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR TCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTCTCCCAACATTATCATaGACAGAGAAGATACAAACC +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFLPTLS*TEKIQT
Trigger: GGTTTGTATCTTCTCTGTTCATGATAATGTTGGGAG...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTGATTCCGATCAGATGTaGATTTTTCCATTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSDSDQM*IFPFLL
Trigger: AAGAAGAAATGGAAAAATGCACATCTGATCGGAATC...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGCAGAGCAATTGTCTGTaGGGTAACTATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKQSNCL*GNYGFS
Trigger: AGAAAAGCCATAGTTACCGCACAGACAATTGCTCTG...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTACTTGTCTTTTTCCATaGCTTTGCTATAGATTCATG +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSTCLFP*LCYRFM
Trigger: CATGAATCTATAGCAAAGGCATGGAAAAAGACAAGT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTTCATTCTTCACATTTaGATCAGTAGCTGTATACTC +
Preference number: 4 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSFILHI*ISSCIL
Trigger: GAGTATACAGCTACTGATGCAAATGTGAAGAATGAA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAATTTTAATGCCAAGCTaGTGCACAGATGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPILMPS*CTDERL
Trigger: AAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAAT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp ATGAAAGAAAATGATGAACTCTGGGATTCTGTCTCCTGGCTTCAGAAGCTGAGGAGGAATCTCTCACAATaGTTTAAAACCCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: MKENDELWDSVSWLQKLRRNLSQ*FKTQVR
Trigger: TCTTACCTGGGTTTTAAAGCATTGTGAGAGATTCCT...CCTCAGCTTCTGAAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGATTTTATGGAAGTTTaGTGCTGTTTCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPDFMEV*CCFRNL
Trigger: GAGATTCCTGAAACAGCAGCAAACTTCCATAAAATC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAAATATACTGGATGGATaGCAGATTCTACAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPNILDG*QILQCH
Trigger: ATGACACTGTAGAATCTGGCATCCATCCAGTATATT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCATGATCTATGTGCTCTaGAGTCTAATGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVMIYVL*SLMFRM
Trigger: CATGCGGAACATTAGACTGCAGAGCACATAGATCAT...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCTTGTTCACTGAACGCTaGATAGCTCCAGAGACACAG +
Preference number: 4 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFLFTER*IAPETQ
Trigger: CTGTGTCTCTGGAGCTATGCAGCGTTCAGTGAACAA...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATGCCCAGGATCCAACTaGTCTAAAATCAATTGTAAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPCPGSN*SKINCN
Trigger: ATTACAATTGATTTTAGACCAGTTGGATCCTGGGCA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATTCCATATACTTCTCTaGATGACGAATCCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPFHILL*MTNPER
Trigger: TCTTTCTGGATTCGTCATCCAGAGAAGTATATGGAA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAATGTTTTGGGATTCCTaGCTTACTGAAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPMFWDS*LTEETE
Trigger: TTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACAT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGGAAAATGATGAACTCTaGGATTCTGTCTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKENDEL*DSVSWL
Trigger: AAGCCAGGAGACAGAATCCCAGAGTTCATCATTTTC...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGTATTCTTGTTCTTTaGCCCCATCTCTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPGILVL*PHLLFY
Trigger: ATAAAACAAGAGATGGGGCCAAAGAACAAGAATACC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCAGAAAAACCTAAAAATTaGGAGCACCTCTCCACTGAT +
Preference number: 4 (lower is better)
Translates to: PYLTVILMPSCCTDERLSEKPKN*EHLSTD
Trigger: ATCAGTGGAGAGGTGCTCCCAATTTTTAGGTTTTTC...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR TCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTTCCAATTTTCACAGTTaGGGACATCAGATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSSNFHS*GHQMEE
Trigger: CTCCTCCATCTGATGTCCTCAACTGTGAAAATTGGA...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCATGCATCCACTTTTTaGACCACACAGCCTTGGTAT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIHASTF*TTQPWY
Trigger: ATACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCGAACAAGCAGATCTATaGGGGATACCAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVEQADL*GIPNLF
Trigger: AAAAAGGTTTGGTATCCCTCATAGATCTGCTTGTTC...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCCTCCCAACATTATCATaGACAGAGAAGATACAAACC +
Preference number: 4 (lower is better)
Translates to: LTVILMPSCCTDERLSFFLPTLS*TEKIQT
Trigger: GGTTTGTATCTTCTCTGTTCATGATAATGTTGGGAG...GAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp CCATACCTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTTTCTGCTTGTTTCTaGAATGCTTTGAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: PYLTVILMPSCCTDERLSFSACF*NALNVP
Trigger: TGGGACATTCAAAGCATTGCAGAAACAAGCAGAAAA...TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAGGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATACAGATGCAATTCTTaGCAAAATACCAGCTATATG +
Preference number: 4 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPYRCNS*QNTSYM
Trigger: CATATAGCTGGTATTTTGGCAAGAATTGCATCTGTA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR GCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGTTAATGCCAAGCTGCTaGACAGATGAAAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKLMPSC*TDERLS
Trigger: TGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAA...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTTTTATGGAAGTTTGCTaGTGTTTCAGGAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFFMEVC*CFRNLS
Trigger: TGAGAGATTCCTGAAACAGCAGCAAACTTCCATAAA...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCTCACTCGAAACCCATaGAGTGCTTCTTCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSLTRNP*SASSFR
Trigger: CCTAAAAGAAGAAGCACTGCATGGGTTTCGAGTGAG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTATGTTTTGGGATTCCTaGCTTACTGAAGAAACAGAA +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFMFWDS*LTEETE
Trigger: TTCTGTTTCTTCAGTAAGCCAGGAATCCCAAAACAT...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCCAAGCCATAATGTTTTaGGATTCCTGGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVQAIMF*DSWLTE
Trigger: TTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTG...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCGTAATCCTTTGGGGGTaGCAGCAAAATGTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVVILWG*QQNVVN
Trigger: ATTTACTACATTTTGCTGCCACCCCCAAAGGATTAC...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTACTGCACATTCTTTTTaGTCACTGAGTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFTAHSF*SLSIHR
Trigger: TCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGT...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCATTTCTTGTAATGTCTaGCAGATAGCAGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVISCNV*QIAVWQ
Trigger: TTGCCAAACTGCTATCTGTCAGACATTACAAGAAAT...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCAATAAAAAGAGCCATTaGCCCAAAAAGTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVNKKSH*PKKWSR
Trigger: TCTAGACCACTTTTTGGGTCAATGGCTCTTTTTATT...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCAGAGCAATTGTCTGTaGGGTAACTATGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIQSNCL*GNYGFS
Trigger: AGAAAAGCCATAGTTACCGCACAGACAATTGCTCTG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR GCA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTACTTGTCTTTTTCCATaGCTTTGCTATAGATTCATG +
Preference number: 4 (lower is better)
Translates to: HGQHNSLAGREEKILWKFTCLFP*LCYRFM
Trigger: CATGAATCTATAGCAAAGGCATGGAAAAAGACAAGT...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp ATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTAATTTTAATGCCAAGCTaGTGCACAGATGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: MPSCCTDERLSFFTFASVILMPS*CTDERL
Trigger: AAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAAT...TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGGATTTTATGGAAGTTTaGTGCTGTTTCAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKDFMEV*CCFRNL
Trigger: GAGATTCCTGAAACAGCAGCAAACTTCCATAAAATC...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR GCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTATGATCTATGTGCTCTaGAGTCTAATGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIMIYVL*SLMFRM
Trigger: CATGCGGAACATTAGACTGCAGAGCACATAGATCAT...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTGAAGTAGTAATCCTTTaGGGGTGGCAGCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTEVVIL*GWQQNV
Trigger: TACATTTTGCTGCCACCCCCAAAGGATTACTACTTC...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 72 bp ATGTGGAGAACCAAGGAACATAATGAAGTTGGTTGGTaGCTCCTAAGTTCAGTGGACAAAGTAATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: MWRTKEHNEVGW*LLSSVDKVMKE
Trigger: TTCTTTCATTACTTTGTCCACTGAACTTAGGAGCAACCAACCAACTTCATTATGTTCCTTGGTTCTCCACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 72 bp GTTCCGCATGTCTCTCAGCAGCACTGTTCGGTAGTTTaGTTCCAAAATTTCCATGTATTCAAAATAATCACT +
Preference number: 4 (lower is better)
Translates to: VPHVSQQHCSVV*FQNFHVFKIIT
Trigger: AGTGATTATTTTGAATACATGGAAATTTTGGAACAAAACTACCGAACAGTGCTGCTGAGAGACATGCGGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTGATGGAGCTTCTTTCTaGTATTCATTTAGAAGACGA +
Preference number: 4 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFDGASF*YSFRRR
Trigger: TCGTCTTCTAAATGAATATCAGAAAGAAGCTCCATC...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATATACTTCTCTGGATaGCGAATCCAGAAAGATGGA +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSIYFSG*RIQKDG
Trigger: TCCATCTTTCTGGATTCGTCATCCAGAGAAGTATAT...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTGAACAAGCAGATCTATaGGGGATACCAAACCTTTTT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIEQADL*GIPNLF
Trigger: AAAAAGGTTTGGTATCCCTCATAGATCTGCTTGTTC...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCTTTGGACAACTTGGTaGGTAATAGATAAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSLWTTW*VIDKLG
Trigger: ACCCAACTTATCTATTACTCACCAAGTTGTCCAAAG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTACTGCACATTCTTTTTaGTCACTGAGTATCCACAGA +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIITAHSF*SLSIHR
Trigger: TCTGTGGATACTCAGTGATCAAAAAGAATGTGCAGT...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR GCA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGAGTTCTGCTATAATGTaGATGCATCCACTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKSSAIM*MHPLFE
Trigger: TTCAAAAAGTGGATGCATGCACATTATAGCAGAACT...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCTACAGATGCAATTCTTaGCAAAATACCAGCTATATG +
Preference number: 4 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVYRCNS*QNTSYM
Trigger: CATATAGCTGGTATTTTGGCAAGAATTGCATCTGTA...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCAAGCCATAATGTTTTaGGATTCCTGGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIQAIMF*DSWLTE
Trigger: TTCAGTAAGCCAGGAATCCCAAAACATTATGGCTTG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCATTGGCCAAGGATATaGATTATCACTCTTTTCGAG +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSHWPRI*IITLFE
Trigger: CTCGAAAAGAGTGATAATCCATATCCTTGGCCAATG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTATTGCCCATAGTGAGTaGCTTATTTCCTTAGACCAA +
Preference number: 4 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTIAHSE*LISLDQ
Trigger: TTGGTCTAAGGAAATAAGCCACTCACTATGGGCAAT...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
3UTR CAA 72 bp ACAGATAGCAGTTTGGCAATGGATATGATGAAAACATaGGCCAAGGATATGGATTATCACTCTTTTCGAGTA +
Preference number: 4 (lower is better)
Translates to: TDSSLAMDMMKT*AKDMDYHSFRV
Trigger: TACTCGAAAAGAGTGATAATCCATATCCTTGGCCAATGTTTTCATCATATCCATTGCCAAACTGCTATCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCATAGCACCTGTTCTTTaGAGAAGTAGTAATCCTTTG +
Preference number: 4 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFIAPVL*RSSNPL
Trigger: CAAAGGATTACTACTTCTTCAAAGAACAGGTGCTAT...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR TCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTATTTCTTGTAATGTCTaGCAGATAGCAGTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIISCNV*QIAVWQ
Trigger: TTGCCAAACTGCTATCTGTCAGACATTACAAGAAAT...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR TCA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTACACTTAATAACCTTTaGCCATATGTGGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTTLNNL*PYVENQ
Trigger: TTGGTTCTCCACATATGGTCAAAGGTTATTAAGTGT...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTTTTATGGAAGTTTGCTaGTGTTTCAGGAATCTCTCA +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSFMEVC*CFRNLS
Trigger: TGAGAGATTCCTGAAACAGCAGCAAACTTCCATAAA...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CCA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTACGAATCCAGAAAGATaGAGCTTCTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTTNPER*SFFLIF
Trigger: GAATATCAGAAAGAAGCTCCATCTTTCTGGATTCGT...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CCA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTATCAATAACACATGTTaGGACTTCACGAAGAGAATA +
Preference number: 4 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFINNTC*DFTKRI
Trigger: TATTCTCTTCGTGAAGTCCCAACATGTGTTATTGAT...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR GCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTGATTCCGATCAGATGTaGATTTTTCCATTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIDSDQM*IFPFLL
Trigger: AAGAAGAAATGGAAAAATGCACATCTGATCGGAATC...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR GCA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTAGTTCTGCTATAATGTaGATGCATCCACTTTTTGAA +
Preference number: 4 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSSSAIM*MHPLFE
Trigger: TTCAAAAAGTGGATGCATGCACATTATAGCAGAACT...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR GCA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTACTTGTCTTTTTCCATaGCTTTGCTATAGATTCATG +
Preference number: 4 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIITCLFP*LCYRFM
Trigger: CATGAATCTATAGCAAAGGCATGGAAAAAGACAAGT...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS CCA 90 bp CGCCTCAGCATCGCCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATaGGCCATCTTTGGGGAAGCAGGGGTCCGCGAGGTCTCGCCTCTG +
Preference number: 5 (lower is better)
Translates to: RLSIACSIAWSSLEK*AIFGEAGVREVSPL
Trigger: CAGAGGCGAGACCTCGCGGACCCCTGCTTCCCCAAAGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422369.1
CDS CCA 90 bp GCACACTCCAGGGAAGGGGCACCCGTGATTTTCTCCTTCACGCTCTaGAACAACCGCCTCAGCATCGCCTGCAGCATCGCCTGGTCCTCG +
Preference number: 5 (lower is better)
Translates to: AHSREGAPVIFSFTL*NNRLSIACSIAWSS
Trigger: CGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCCTGGAGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000422369.1
ENST00000464622.5
CDS GCA 90 bp GTGATTTTCTCCTTCACGCTCTGGAACAACCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCGCTGGAGAAATGGGCCATCCTGTTG +
Preference number: 5 (lower is better)
Translates to: VIFSFTLWNNRLSIA*SIAWSSLEKWAILL
Trigger: CAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS GCA 90 bp GTGATTTTCTCCTTCACGCTCTGGAACAACCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCGCTGGAGAAATGGGCCATCTTTGGG +
Preference number: 5 (lower is better)
Translates to: VIFSFTLWNNRLSIA*SIAWSSLEKWAIFG
Trigger: CCCAAAGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAAAATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422369.1
CDS CCA 90 bp CGCCTCAGCATCGCCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATaGGCCATCCTGTTGGAATCAAACGTCCACTCTCATTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: RLSIACSIAWSSLEK*AILLESNVHSHYSR
Trigger: CCTGGAGTAATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 90 bp TTCACGCTCTGGAACAACCGCCTCAGCATCGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGGGCCATCCTGTTGGAATCAAACGTC +
Preference number: 5 (lower is better)
Translates to: FTLWNNRLSIACSIA*SSLEKWAILLESNV
Trigger: GACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 90 bp GGAACAACCGCCTCAGCATCGCCTGCAGCATCGCCTGGTCCTCGCTaGAGAAATGGGCCATCCTGTTGGAATCAAACGTCCACTCTCATT +
Preference number: 5 (lower is better)
Translates to: GTTASASPAASPGPR*RNGPSCWNQTSTLI
Trigger: AATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 90 bp CCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATGGGCCATCCTGTTaGAATCAAACGTCCACTCTCATTACTCCAGGTCCGAGCAAAAGC +
Preference number: 5 (lower is better)
Translates to: PAASPGPRWRNGPSC*NQTSTLITPGPSKS
Trigger: GCTTTTGCTCGGACCTGGAGTAATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTCTCACCTCTTTAGGTaGCCCAGGATCCAACTGGTC +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDSHLFR*PRIQLV
Trigger: GACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAGA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACATAGAACCCAAAGTGTaGCCTATATGCTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDIEPKV*PICCLR
Trigger: CCTCAGGCAGCATATAGGCAACACTTTGGGTTCTAT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTTCTCACCTCTTTAGGTaGCCCAGGATCCAACTGGTC +
Preference number: 5 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFSHLFR*PRIQLV
Trigger: GACCAGTTGGATCCTGGGCAACCTAAAGAGGTGAGA...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGCATGCATCCACTTTTaGAACCACACAGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDACIHF*NHTALV
Trigger: TACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATGC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACGTACTGAACACACTGTaGAATGGCTGTAGTTACCAG +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDVLNTL*NGCSYQ
Trigger: CTGGTAACTACAGCCATTCAACAGTGTGTTCAGTAC...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCTTCAGTCACCATACTaGCAGGAGAGTAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDLQSPY*QESNSL
Trigger: CAGAGAATTACTCTCCTGCAAGTATGGTGACTGAAG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAATGAAGTTGGTTGGTaGCTCCTAAGTTCAGTGGAC +
Preference number: 5 (lower is better)
Translates to: VAGTTGASLHPANFSIVSNEVGW*LLSSVD
Trigger: GTCCACTGAACTTAGGAGCAACCAACCAACTTCATT...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTATAGAACCCAAAGTGTaGCCTATATGCTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSIEPKV*PICCLR
Trigger: CCTCAGGCAGCATATAGGCAACACTTTGGGTTCTAT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCAGCTGATGTCATCTTaGGACAACTTGGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: VAGTTGASLHPANFSIVSQLMSS*DNLVSN
Trigger: ATTACTCACCAAGTTGTCCAAAGATGACATCAGCTG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCACTGCACATTCTTTTaGATCACTGAGTATCCACAG +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDHCTFF*ITEYPQ
Trigger: CTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCACTGCACATTCTTTTaGATCACTGAGTATCCACAG +
Preference number: 5 (lower is better)
Translates to: VAGTTGASLHPANFSIVSHCTFF*ITEYPQ
Trigger: CTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTTGAACCACACAGCCTaGGTATCAACTAATGCAAAA +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDLNHTA*VSTNAK
Trigger: TTTTGCATTAGTTGATACCAAGGCTGTGTGGTTCAA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCACTGCACATTCTTTTaGATCACTGAGTATCCACAG +
Preference number: 5 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEHCTFF*ITEYPQ
Trigger: CTGTGGATACTCAGTGATCAAAAAGAATGTGCAGTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCTGTCTCAGAGCAATTaGGAGATGCCTCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSLSQSN*EMPHFL
Trigger: AAGGAAATGAGGCATCTCCAAATTGCTCTGAGACAG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTAGAAGTAGTAATCCTTaGGGGGTGGCAGCAAAATGT +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSRSSNP*GVAAKC
Trigger: ACATTTTGCTGCCACCCCCAAAGGATTACTACTTCT...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTAGAAGTAGTAATCCTTaGGGGGTGGCAGCAAAATGT +
Preference number: 5 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFRSSNP*GVAAKC
Trigger: ACATTTTGCTGCCACCCCCAAAGGATTACTACTTCT...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACCTGACAGATAGCAGTTaGGCAATGGATATGATGAAA +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDLTDSS*AMDMMK
Trigger: TTTCATCATATCCATTGCCAAACTGCTATCTGTCAG...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GTAGCAGGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCCAGCTAATTTCAGTATaGTTAGCAGAGACGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VAGTTGASLHPANFSIVSQLISV*LAETRF
Trigger: AAACCTCGTCTCTGCTAACAATACTGAAATTAGCTG...GCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCCTGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAAAATGGGCCATCCTGTaGGAATCAAACGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPKWAIL*ESNVHS
Trigger: AGAGTGGACGTTTGATTCCAACAGGATGGCCCATTT...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCAGAAATATGTAGCCTaGGCAACCAAAGAAAAGCAG +
Preference number: 5 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEQKYVA*ATKEKQ
Trigger: CTGCTTTTCTTTGGTTGCCAAGGCTACATATTTCTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACTCATCTTCTTCAAACTaGTTAATCATAGACTCGACC +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDSSSSN*LIIDST
Trigger: GGTCGAGTCTATGATTAACAAGTTTGAAGAAGATGA...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGTCCAATTTTCACAGTaGAGGACATCAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPVQFSQ*RTSDGG
Trigger: TCCTCCATCTGATGTCCTCAACTGTGAAAATTGGAC...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACAGCTTGTCAAGATCATaGTCTTGTTTTATACCAGCA +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDSLSRS*SCFIPA
Trigger: TGCTGGTATAAAACAAGACAATGATCTTGACAAGCT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS-3UTR CAA 90 bp GGGACTACAGGCGCATCACTGCACCCAGCTAATTTCAGTATTGTTAGCAGAGACAGATTTTATGGAAGTTaGCTGCTGTTTCAGGAATCT +
Preference number: 5 (lower is better)
Translates to: GTTGASLHPANFSIVSRDRFYGS*LLFQES
Trigger: AGATTCCTGAAACAGCAGCAAACTTCCATAAAATCT...GTCTCTGCTAACAATACTGAAATTAGCTGGGTGCAGTGATGCGCCTGTAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCAGAAGCCTGGAGAATaGATGAAGAAATTGGAATGT +
Preference number: 5 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEQKPGE*MKKLEC
Trigger: ACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCAGCTAATTTCAGTATaGTTAGCAGAGACGAGGTTT +
Preference number: 5 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEQLISV*LAETRF
Trigger: AAACCTCGTCTCTGCTAACAATACTGAAATTAGCTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACAGCTGATGTCATCTTaGGACAACTTGGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPQLMSS*DNLVSN
Trigger: ATTACTCACCAAGTTGTCCAAAGATGACATCAGCTG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCAGAAGCCTGGAGAATaGATGAAGAAATTGGAATGT +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSQKPGE*MKKLEC
Trigger: ACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GAGAAGATACAAACCAGTCATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGCACTGTTCGGTAGTTTaGTTCCAAAATTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: EKIQTSHGQHNSLAGREEHCSVV*FQNFHV
Trigger: TACATGGAAATTTTGGAACAAAACTACCGAACAGTG...CTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATGACTGGTTTGTATCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp TTTTCGAGTAACCTCGGAGGCAAAATCCGTTCCAATGGCCCACCAACAAGATTTTGGTATTCTTGTTCTTaGGCCCCATCTCTTGTTTTA +
Preference number: 5 (lower is better)
Translates to: FSSNLGGKIRSNGPPTRFWYSCS*APSLVL
Trigger: TAAAACAAGAGATGGGGCCAAAGAACAAGAATACCA...AAATCTTGTTGGTGGGCCATTGGAACGGATTTTGCCTCCGAGGTTACTCGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTATAGAACCCAAAGTGTaGCCTATATGCTGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFIEPKV*PICCLR
Trigger: CCTCAGGCAGCATATAGGCAACACTTTGGGTTCTAT...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTCATCTTCTTCAAACTaGTTAATCATAGACTCGACC +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSSSSSN*LIIDST
Trigger: GGTCGAGTCTATGATTAACAAGTTTGAAGAAGATGA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp CTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCGTCCAATTTTCACAGTaGAGGACATCAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: LTVILMPSCCTDERLSFFVQFSQ*RTSDGG
Trigger: TCCTCCATCTGATGTCCTCAACTGTGAAAATTGGAC...GAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTGCATGCATCCACTTTTaGAACCACACAGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFACIHF*NHTALV
Trigger: TACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATGC...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp TGCTTGTTTCTGCAATGCTTTGAATGTCCCAAAGTTTCATCAGCTTTCCTAGTCGTACTGAACACACTGTaGAATGGCTGTAGTTACCAG +
Preference number: 5 (lower is better)
Translates to: CLFLQCFECPKVSSAFLVVLNTL*NGCSYQ
Trigger: CTGGTAACTACAGCCATTCAACAGTGTGTTCAGTAC...GACTAGGAAAGCTGATGAAACTTTGGGACATTCAAAGCATTGCAGAAACAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTTGTTTCTGCAATGCTTaGAATGTCCCAAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSCFCNA*NVPKFH
Trigger: ATGAAACTTTGGGACATTCAAAGCATTGCAGAAACA...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp CTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCCTGTCTCAGAGCAATTaGGAGATGCCTCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: LTVILMPSCCTDERLSFFLSQSN*EMPHFL
Trigger: AAGGAAATGAGGCATCTCCAAATTGCTCTGAGACAG...GAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCTACAGATGCAATTCTaGCCAAAATACCAGCTATAT +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSLQMQF*PKYQLY
Trigger: ATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCACTGACAGATAGCAGTTaGGCAATGGATATGATGAAA +
Preference number: 5 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPLTDSS*AMDMMK
Trigger: TTTCATCATATCCATTGCCAAACTGCTATCTGTCAG...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp AGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCAGGATGGTCTCGATCTCACTGTTCGGTAGTTTaGTTCCAAAATTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: SIVSRDEVSPFWPGWSRSHCSVV*FQNFHV
Trigger: TACATGGAAATTTTGGAACAAAACTACCGAACAGTG...AGATCGAGACCATCCTGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTGCATGCATCCACTTTTaGAACCACACAGCCTTGGTA +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSACIHF*NHTALV
Trigger: TACCAAGGCTGTGTGGTTCAAAAAGTGGATGCATGC...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp CACCCAGCTAATTTCAGTATTGTTAGCAGAGACGAGGTTTCACCATTTTGGCCATGTTTCTGCAATGCTTaGAATGTCCCAAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: HPANFSIVSRDEVSPFWPCFCNA*NVPKFH
Trigger: ATGAAACTTTGGGACATTCAAAGCATTGCAGAAACA...TGGCCAAAATGGTGAAACCTCGTCTCTGCTAACAATACTGAAATTAGCTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000464622.5
CDS-3UTR CAA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTCTTCAGTCACCATACTaGCAGGAGAGTAATTCTCTG +
Preference number: 5 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFLQSPY*QESNSL
Trigger: CAGAGAATTACTCTCCTGCAAGTATGGTGACTGAAG...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp CATGGCCAGCATAATTCCCTTGCAGGCAGAGAAGAGAAGATTTTATGGAAGTTTCAGAAGCCTGGAGAATaGATGAAGAAATTGGAATGT +
Preference number: 5 (lower is better)
Translates to: HGQHNSLAGREEKILWKFQKPGE*MKKLEC
Trigger: ACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTG...AAACTTCCATAAAATCTTCTCTTCTCTGCCTGCAAGGGAATTATGCTGGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CAA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTAAATGGGCCATCCTGTaGGAATCAAACGTCCACTCT +
Preference number: 5 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIKWAIL*ESNVHS
Trigger: AGAGTGGACGTTTGATTCCAACAGGATGGCCCATTT...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp CTGACAGTCATTTTAATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCAGCTTGTCAAGATCATaGTTCACTGAACGCTGCATA +
Preference number: 5 (lower is better)
Translates to: LTVILMPSCCTDERLSFFSLSRS*FTERCI
Trigger: TATGCAGCGTTCAGTGAACAATGATCTTGACAAGCT...GAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCATTAAAATGACTGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTGTACTGAACACACTGTaGAATGGCTGTAGTTACCAG +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSVLNTL*NGCSYQ
Trigger: CTGGTAACTACAGCCATTCAACAGTGTGTTCAGTAC...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCTGTCTCAGAGCAATTaGGAGATGCCTCATTTCCTT +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSLSQSN*EMPHFL
Trigger: AAGGAAATGAGGCATCTCCAAATTGCTCTGAGACAG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTAGAAGTAGTAATCCTTaGGGGGTGGCAGCAAAATGT +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSRSSNP*GVAAKC
Trigger: ACATTTTGCTGCCACCCCCAAAGGATTACTACTTCT...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS TCA 90 bp ATCCGTTCCAATGGCCCACCAACAAGATTTATTCTAACAAGAACATaGTTTCTCTCCACTGATAAGCCATCAATTATAAAGTCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IRSNGPPTRFILTRT*FLSTDKPSIIKSLE
Trigger: TTCCAGGGACTTTATAATTGATGGCTTATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523345.1
CDS-3UTR CAA 90 bp AGGGAAGTAGCATTCAGATGGGCTTTCAGTGAGATGAAGCACAAATTTTTCAAGTGTTTCTGCAATGCTTaGAATGTCCCAAAGTTTCAT +
Preference number: 5 (lower is better)
Translates to: REVAFRWAFSEMKHKFFKCFCNA*NVPKFH
Trigger: ATGAAACTTTGGGACATTCAAAGCATTGCAGAAACA...CTTGAAAAATTTGTGCTTCATCTCACTGAAAGCCCATCTGAATGCTACTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTCAGCTGATGTCATCTTaGGACAACTTGGTGAGTAAT +
Preference number: 5 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTQLMSS*DNLVSN
Trigger: ATTACTCACCAAGTTGTCCAAAGATGACATCAGCTG...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp GATTCAATGATGAATCACTATCAGAGCAATTGTCTGTGCGGTAACTATGGCTTTCTGACAGATAGCAGTTaGGCAATGGATATGATGAAA +
Preference number: 5 (lower is better)
Translates to: DSMMNHYQSNCLCGNYGFLTDSS*AMDMMK
Trigger: TTTCATCATATCCATTGCCAAACTGCTATCTGTCAG...AAAGCCATAGTTACCGCACAGACAATTGCTCTGATAGTGATTCATCATTGAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp ATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTAAGCTTGTCAAGATCATaGTCTTGTTTTATACCAGCA +
Preference number: 5 (lower is better)
Translates to: MPSCCTDERLSFFTFASVSLSRS*SCFIPA
Trigger: TGCTGGTATAAAACAAGACAATGATCTTGACAAGCT...TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509492.2
CDS-3UTR CAA 90 bp ATGCCAAGCTGCTGCACAGATGAAAGACTTTCATTCTTCACATTTGCATCAGTAAGATTTTATGGAAGTTaGCTGCTGTTTCAGGAATCT +
Preference number: 5 (lower is better)
Translates to: MPSCCTDERLSFFTFASVRFYGS*LLFQES
Trigger: AGATTCCTGAAACAGCAGCAAACTTCCATAAAATCT...TACTGATGCAAATGTGAAGAATGAAAGTCTTTCATCTGTGCAGCAGCTTGGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464622.5
ENST00000509492.2
CDS-3UTR CAA 90 bp TCATCTAACAAATTATCTTCCCAAGCCATAATGTTTTGGGATTCCTGGCTTACTCTTTGGCCCCATCTCTaGTTTTATACCAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: SSNKLSSQAIMFWDSWLTLWPHL*FYTSIS
Trigger: AGAAATGCTGGTATAAAACAAGAGATGGGGCCAAAG...AGTAAGCCAGGAATCCCAAAACATTATGGCTTGGGAAGATAATTTGTTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS TCA 90 bp ATCCGTTCCAATGGCCCACCAACAAGATTTATTCTAACAAGAACATaGTTTCTCTCCACTGATAAGCCATCAATTATAAAGTCCCTTAGA +
Preference number: 5 (lower is better)
Translates to: IRSNGPPTRFILTRT*FLSTDKPSIIKSLR
Trigger: TCTAAGGGACTTTATAATTGATGGCTTATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTTTGAACCACACAGCCTaGGTATCAACTAATGCAAAA +
Preference number: 5 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIILNHTA*VSTNAK
Trigger: TTTTGCATTAGTTGATACCAAGGCTGTGTGGTTCAA...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCAGAAGCCTGGAGAATaGATGAAGAAATTGGAATGT +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSQKPGE*MKKLEC
Trigger: ACATTCCAATTTCTTCATCAATTCTCCAGGCTTCTG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCAGCTAATTTCAGTATaGTTAGCAGAGACGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIQLISV*LAETRF
Trigger: AAACCTCGTCTCTGCTAACAATACTGAAATTAGCTG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS TCA 90 bp ATCCGTTCCAATGGCCCACCAACAAGATTTATTCTAACAAGAACATaGTTTCTCTCCACTGATAAGCCATCAATTATAAAGTCCAATAAC +
Preference number: 5 (lower is better)
Translates to: IRSNGPPTRFILTRT*FLSTDKPSIIKSNN
Trigger: GTTATTGGACTTTATAATTGATGGCTTATCAGTGGAGAGAAATCATGTTCTTGTTAGAATAAATCTTGTTGGTGGGCCATTGGAACGGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398197.6
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTCTACAGATGCAATTCTaGCCAAAATACCAGCTATAT +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSLQMQF*PKYQLY
Trigger: ATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAG...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCCTACAGATGCAATTCTaGCCAAAATACCAGCTATAT +
Preference number: 5 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFLQMQF*PKYQLY
Trigger: ATATAGCTGGTATTTTGGCAAGAATTGCATCTGTAG...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTAGCTTGTCAAGATCATaGTCTTGTTTTATACCAGCA +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSSLSRS*SCFIPA
Trigger: TGCTGGTATAAAACAAGACAATGATCTTGACAAGCT...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp AAACAATTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTAGATTTTATGGAAGTTaGCTGCTGTTTCAGGAATCT +
Preference number: 5 (lower is better)
Translates to: KQLCPRTTVFLPLAMVNSRFYGS*LLFQES
Trigger: AGATTCCTGAAACAGCAGCAAACTTCCATAAAATCT...ACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS-3UTR CAA 90 bp CAAAATTTCCATGTATTCAAAATAATCACTCACTCGAAACCCATGCAGTGCTTCAGATTTTATGGAAGTTaGCTGCTGTTTCAGGAATCT +
Preference number: 5 (lower is better)
Translates to: QNFHVFKIITHSKPMQCFRFYGS*LLFQES
Trigger: AGATTCCTGAAACAGCAGCAAACTTCCATAAAATCT...GAAGCACTGCATGGGTTTCGAGTGAGTGATTATTTTGAATACATGGAAATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464622.5
CDS-3UTR CAA 90 bp TTATGTCCAAGGACAACAGTTTTCCTACCACTTGCCATGGTAAATAGTATCATTCACTGTTCGGTAGTTTaGTTCCAAAATTTCCATGTA +
Preference number: 5 (lower is better)
Translates to: LCPRTTVFLPLAMVNSIIHCSVV*FQNFHV
Trigger: TACATGGAAATTTTGGAACAAAACTACCGAACAGTG...AATGATACTATTTACCATGGCAAGTGGTAGGAAAACTGTTGTCCTTGGACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS CCA 72 bp ATCGCCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATaGGCCATCTTTGGGGAAGCAGGGGTCCGCGAGGTC +
Preference number: 6 (lower is better)
Translates to: IACSIAWSSLEK*AIFGEAGVREV
Trigger: GACCTCGCGGACCCCTGCTTCCCCAAAGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422369.1
CDS GCA 72 bp TCCTTCACGCTCTGGAACAACCGCCTCAGCATCGCCTaGAGCATCGCCTGGTCCTCGCTGGAGAAATGGGCC +
Preference number: 6 (lower is better)
Translates to: SFTLWNNRLSIA*SIAWSSLEKWA
Trigger: GGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000422369.1
ENST00000464622.5
CDS CCA 72 bp AGGGAAGGGGCACCCGTGATTTTCTCCTTCACGCTCTaGAACAACCGCCTCAGCATCGCCTGCAGCATCGCC +
Preference number: 6 (lower is better)
Translates to: REGAPVIFSFTL*NNRLSIACSIA
Trigger: GGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCAGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000422369.1
ENST00000464622.5
CDS CCA 72 bp GCCTCAGCATCGCCTGCAGCATCGCCTGGTCCTCGCTaGAGAAATGGGCCATCCTGTTGGAATCAAACGTCC +
Preference number: 6 (lower is better)
Translates to: ASASPAASPGPR*RNGPSCWNQTS
Trigger: GGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 72 bp TGGAACAACCGCCTCAGCATCGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGGGCCATCCTGTTGGAA +
Preference number: 6 (lower is better)
Translates to: WNNRLSIACSIA*SSLEKWAILLE
Trigger: TTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 72 bp TGGAACAACCGCCTCAGCATCGCCTGCAGCATCGCCTaGTCCTCGCTGGAGAAATGGGCCATCTTTGGGGAA +
Preference number: 6 (lower is better)
Translates to: WNNRLSIACSIA*SSLEKWAIFGE
Trigger: TTCCCCAAAGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGATGCTGAGGCGGTTGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422369.1
CDS TCA 72 bp GAATCTCTTCGGCACACTCCAGGGAAGGGGCACCCGTaGTTTTCTCCTTCACGCTCTGGAACAACCGCCTCA +
Preference number: 6 (lower is better)
Translates to: ESLRHTPGKGHP*FSPSRSGTTAS
Trigger: TGAGGCGGTTGTTCCAGAGCGTGAAGGAGAAAATCACGGGTGCCCCTTCCCTGGAGTGTGCCGAAGAGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275159.10
ENST00000398212.7
ENST00000422369.1
ENST00000464622.5
CDS CAA 90 bp GCCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATGGGCCATCCTGTaGGAATCAAACGTCCACTCTCATTACTCCAGGTCCGAGCAAAAG +
Preference number: 6 (lower is better)
Translates to: ACSIAWSSLEKWAIL*ESNVHSHYSRSEQK
Trigger: CTTTTGCTCGGACCTGGAGTAATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398212.7
CDS CCA 72 bp TCGCCTGGTCCTCGCTGGAGAAATGGGCCATCCTGTTaGAATCAAACGTCCACTCTCATTACTCCAGGTCCG +
Preference number: 6 (lower is better)
Translates to: SPGPRWRNGPSC*NQTSTLITPGP
Trigger: CGGACCTGGAGTAATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CCA 72 bp ATCGCCTGCAGCATCGCCTGGTCCTCGCTGGAGAAATaGGCCATCCTGTTGGAATCAAACGTCCACTCTCAT +
Preference number: 6 (lower is better)
Translates to: IACSIAWSSLEK*AILLESNVHSH
Trigger: ATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGATGCTGCAGGCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CAA 72 bp ATCGCCTGGTCCTCGCTGGAGAAATGGGCCATCCTGTaGGAATCAAACGTCCACTCTCATTACTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: IAWSSLEKWAIL*ESNVHSHYSRS
Trigger: GGACCTGGAGTAATGAGAGTGGACGTTTGATTCCAACAGGATGGCCCATTTCTCCAGCGAGGACCAGGCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398212.7
ENST00000464622.5
CDS CAA 72 bp AAGTCCCTGGAAAATCGGGTCACTCCCACCCGAATATaGCGCTTTTCAGACCGGCTTAAGAAACGGCGCACC +
Preference number: 6 (lower is better)
Translates to: KSLENRVTPTRI*RFSDRLKKRRT
Trigger: GGTGCGCCGTTTCTTAAGCCGGTCTGAAAAGCGCAATATTCGGGTGGGAGTGACCCGATTTTCCAGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523345.1
CDS CCA 72 bp TTCAGAAGGAATGGCACCAGCTCCTCTTTGTACCTCTaGGTAGAATTCGGCTGTGAATTGGTCTGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: FRRNGTSSSLYL*VEFGCELVWFW
Trigger: CCAGAACCAGACCAATTCACAGCCGAATTCTACCCAGAGGTACAAAGAGGAGCTGGTGCCATTCCTTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368464.7
CDS CCA 72 bp AAAAGACTTTTGACAGCTTCGGTCAATAGGATCCACTaGAGTAGTTCTGGGATGGGTTACCCTAACATCATC +
Preference number: 6 (lower is better)
Translates to: KRLLTASVNRIH*SSSGMGYPNII
Trigger: GATGATGTTAGGGTAACCCATCCCAGAACTACTCCAGTGGATCCTATTGACCGAAGCTGTCAAAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275159.10
ENST00000398212.7
CDS CCA 72 bp AATGAGTTAGGGAGGATTCCCTCTTCTTCTATTGTTTaGAATAGTTTCAGAAGGAATGGCACCAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: NELGRIPSSSIV*NSFRRNGTSSS
Trigger: AGAGGAGCTGGTGCCATTCCTTCTGAAACTATTCCAAACAATAGAAGAAGAGGGAATCCTCCCTAACTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368464.7
CDS TCA 72 bp AGGTTTTGGTATCAGGATGATGCTGGCCTTATAAAATaGGTTAGGGAGGATTCCCTCTTCTTCTATTGTTTG +
Preference number: 6 (lower is better)
Translates to: RFWYQDDAGLIK*VREDSLFFYCL
Trigger: CAAACAATAGAAGAAGAGGGAATCCTCCCTAACTCATTTTATAAGGCCAGCATCATCCTGATACCAAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368464.7