RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D30 (Homo sapiens)

Ensembl gene IDs: ENSG00000111490

Ensembl transcript IDs: ENST00000434563.3, ENST00000456757.6, ENST00000539120.1, ENST00000539867.6, ENST00000542120.6, ENST00000544457.1, ENST00000674171.1, ENST00000674237.1

Found 1261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCAGTGCCGCTGGCAGGGTGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: VAALGSFAGGFVFFG*TRRLWAVPLAGWVH
Trigger: GTGCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp GCAGTGCCGCTGGCAGGGTGGGTGCACCCTGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAGTTCCAGGGCTCCCAACTTCGCCTG +
Preference number: 1 (lower is better)
Translates to: AVPLAGWVHPELSFS*SIPLVQFQGSQLRL
Trigger: CAGGCGAAGTTGGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 90 bp GCTTTGTTTTCTTCGGGTGCACTCGGCGGCTCTGGGCAGTGCCGCTaGCAGGGTGGGTGCACCCTGAGCTCAGTTTCAGCTGCAGCATCC +
Preference number: 1 (lower is better)
Translates to: ALFSSGALGGSGQCR*QGGCTLSSVSAAAS
Trigger: GGATGCTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 90 bp AGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCACTCGGCGGCTCTaGGCAGTGCCGCTGGCAGGGTGGGTGCACCCTGAGCTCAGTTTC +
Preference number: 1 (lower is better)
Translates to: SFAGGFVFFGCTRRL*AVPLAGWVHPELSF
Trigger: GAAACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp GCCTTCTCTCCCAGCTGTCGCTGTACAACCAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGTCTTGCTGGCCTCGTTCTGCTCATC +
Preference number: 1 (lower is better)
Translates to: AFSPSCRCTTRGECL*CPQPIGLAGLVLLI
Trigger: GATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCTGGTTGTACAGCGACAGCTGGGAGAGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp GAGACTGCCCCTCGATCGTCCTCCTGGTACTGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCGCTGTACAACCAGAGGGGAATGCCT +
Preference number: 1 (lower is better)
Translates to: ETAPRSSSWYCLQGC*LLSQLSLYNQRGMP
Trigger: AGGCATTCCCCTCTGGTTGTACAGCGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGGGGCAGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp GCTGCAGCATCCCTCTGGTTCAGTTCCAGGGCTCCCAACTTCGCCTaGACTGCAGACACATCCACATCAGCATCTCCGAACACCGGCTCC +
Preference number: 1 (lower is better)
Translates to: AAASLWFSSRAPNFA*TADTSTSASPNTGS
Trigger: GGAGCCGGTGTTCGGAGATGCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp AGGAACCAGCGAGTCTGCAAATGCTGGGCAGGTCACAGGCCACCCTaGAACCCAGCGATTAGACTGGGGGAGATAGAGCTTATTGGGCTG +
Preference number: 1 (lower is better)
Translates to: RNQRVCKCWAGHRPP*NPAIRLGEIELIGL
Trigger: CAGCCCAATAAGCTCTATCTCCCCCAGTCTAATCGCTGGGTTGCAGGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp TTCTCTCCCAGCTGTCGCTGTACAACCAGAGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTTGCTGGCCTCGTTCTGCTCATCTAT +
Preference number: 1 (lower is better)
Translates to: FSPSCRCTTRGECLC*PQPIGLAGLVLLIY
Trigger: ATAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCTGGTTGTACAGCGACAGCTGGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp AGCATCCCTCTGGTTCAGTTCCAGGGCTCCCAACTTCGCCTGAACTaGAGACACATCCACATCAGCATCTCCGAACACCGGCTCCGGAGA +
Preference number: 1 (lower is better)
Translates to: SIPLVQFQGSQLRLN*RHIHISISEHRLRR
Trigger: TCTCCGGAGCCGGTGTTCGGAGATGCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGCCCTGGAACTGAACCAGAGGGATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp TGCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTCAGGAA +
Preference number: 1 (lower is better)
Translates to: CRPGSAWSPSSHPYH*GSKLSLRGEHKPQE
Trigger: TTCCTGAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 90 bp ACTCTGTGCTTACTCATATTCAGGAACCAGCGAGTCTGCAAATGCTaGGCAGGTCACAGGCCACCCTGCAACCCAGCGATTAGACTGGGG +
Preference number: 1 (lower is better)
Translates to: TLCLLIFRNQRVCKC*AGHRPPCNPAIRLG
Trigger: CCCCAGTCTAATCGCTGGGTTGCAGGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCTGAATATGAGTAAGCACAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 90 bp GGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCA +
Preference number: 1 (lower is better)
Translates to: GAHQVIRTTEDQSSP*EANTNLRKSSVARA
Trigger: TGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 90 bp ACCTACAGTACCAGTCCCCATTCAGGTGAGCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGTTCTGCCTTCAGCCACTGTCCAGCA +
Preference number: 1 (lower is better)
Translates to: TYSTSPHSGEHWLPL*KNHSNSSAFSHCPA
Trigger: TGCTGGACAGTGGCTGAAGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp GACCCAATACCTACAGTACCAGTCCCCATTCAGGTGAGCACTGGCTaGCTTTGTGGAAGAACCACTCCAACAGTTCTGCCTTCAGCCACT +
Preference number: 1 (lower is better)
Translates to: DPIPTVPVPIQVSTG*LCGRTTPTVLPSAT
Trigger: AGTGGCTGAAGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGGTATTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 90 bp AAAGCTCTCCTTGAGAGGCGAACACAAACCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAAGCATATGCCA +
Preference number: 1 (lower is better)
Translates to: KALLERRTQTSGKAQ*REQAVRSNCVKHMP
Trigger: TGGCATATGCTTTACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 90 bp CAGCCACTGTCCAGCAAAGGCCTCCCATCCATCACTGTATCCTGGTaGCTCTATGACTGTAGACTTGCTGACTTTACTCTGAGCTGCCTG +
Preference number: 1 (lower is better)
Translates to: QPLSSKGLPSITVSW*LYDCRLADFTLSCL
Trigger: CAGGCAGCTCAGAGTAAAGTCAGCAAGTCTACAGTCATAGAGCCACCAGGATACAGTGATGGATGGGAGGCCTTTGCTGGACAGTGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 90 bp CACAAAATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTCTGCAGTCTAGAGCTGGTGGGTGAG +
Preference number: 1 (lower is better)
Translates to: HKIQVTESQVLCSGF*AEALCVCSLELVGE
Trigger: CTCACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATTTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 90 bp CTTCAGCCACTGTCCAGCAAAGGCCTCCCATCCATCACTGTATCCTaGTGGCTCTATGACTGTAGACTTGCTGACTTTACTCTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: LQPLSSKGLPSITVS*WLYDCRLADFTLSC
Trigger: GCAGCTCAGAGTAAAGTCAGCAAGTCTACAGTCATAGAGCCACCAGGATACAGTGATGGATGGGAGGCCTTTGCTGGACAGTGGCTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp TGCCTGGGATGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTaGAGGTCATTTGGTCTCACCAGAGCAAACGACCAGGAAGGAAGC +
Preference number: 1 (lower is better)
Translates to: CLGWKGWREWNQVTL*RSFGLTRANDQEGS
Trigger: GCTTCCTTCCTGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCATCCCAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp CAGTTCAGGAGCCAGGAACCCACTAAAAGGTCCAAGACACCCCACTaGATTAACGACAGCATCCTCATCGTCTGGGTCATTCTCTTCATC +
Preference number: 1 (lower is better)
Translates to: QFRSQEPTKRSKTPH*INDSILIVWVILFI
Trigger: GATGAAGAGAATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGACCTTTTAGTGGGTTCCTGGCTCCTGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp GTGCCACTGTTTCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGGGTTCTTTCTGTAGGGCCATATAAT +
Preference number: 1 (lower is better)
Translates to: VPLFPPPGLLKLLLI*GKCTVGVLSVGPYN
Trigger: ATTATATGGCCCTACAGAAAGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAACAGTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp TCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACATGAAGGCTaGGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAG +
Preference number: 1 (lower is better)
Translates to: SCKYRQSSSRDKHEG*VYSSNDGEEKGIEE
Trigger: CTCCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 90 bp TACCTCATCCATCCCCTTCTCAGGAAGACCAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGGGCACAGCATGTGTTGTTGATACTA +
Preference number: 1 (lower is better)
Translates to: YLIHPLLRKTNPGNR*EESVHRAQHVLLIL
Trigger: TAGTATCAACAACACATGCTGTGCCCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTTGGTCTTCCTGAGAAGGGGATGGATGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 90 bp GAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTaGTCTCACCAGAGCAAACGACCAGGAAGGAAGCAACCTTCAACG +
Preference number: 1 (lower is better)
Translates to: EGMERMESSDTLQVI*SHQSKRPGRKQPST
Trigger: CGTTGAAGGTTGCTTCCTTCCTGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 90 bp ATAAAGATTGCCTGGGATGGAAGGGATGGAGAGAATGGAATCAAGTaGCACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGACCAGG +
Preference number: 1 (lower is better)
Translates to: IKIAWDGRDGENGIK*HFAGHLVSPEQTTR
Trigger: CCTGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCATCCCAGGCAATCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp GGCTGGGAACGGTGTAATGTTGTAGGTGTATTTTTCCCTCAACTCTaGCAATTGTGGGAAAGGGAACGGAGCCATGGAATAAACAGTCTG +
Preference number: 1 (lower is better)
Translates to: GWERCNVVGVFFPQL*QLWERERSHGINSL
Trigger: CAGACTGTTTATTCCATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGGGAAAAATACACCTACAACATTACACCGTTCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp TTCTTTCCTAAAAGAAGGTGGTTTATAACTGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTCACTGGCCCTTTGTCTGCCCTGATG +
Preference number: 1 (lower is better)
Translates to: FFPKRRWFITGELFT*DGRMLVTGPLSALM
Trigger: CATCAGGGCAGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCCAGTTATAAACCACCTTCTTTTAGGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp AGACTCTGCTCCTCATTTGGCTCTTTAATTTGTTTTTGGTACTTCTaGAGTTCAGGAGCCAGGAACCCACTAAAAGGTCCAAGACACCCC +
Preference number: 1 (lower is better)
Translates to: RLCSSFGSLICFWYF*SSGARNPLKGPRHP
Trigger: GGGGTGTCTTGGACCTTTTAGTGGGTTCCTGGCTCCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAGCCAAATGAGGAGCAGAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 90 bp GGGCCCTTCCTCACCAGATACCAAATTTGCAGACACGTTGATCTTTaGCTTCTCAGCCTCCAGAACTGTGAGAAAGAAATGTCTGTGTTT +
Preference number: 1 (lower is better)
Translates to: GPFLTRYQICRHVDL*LLSLQNCEKEMSVF
Trigger: AAACACAGACATTTCTTTCTCACAGTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCTGCAAATTTGGTATCTGGTGAGGAAGGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 90 bp CTCTATGACTGTAGACTTGCTGACTTTACTCTGAGCTGCCTGATGTaGATAACAGATAACTCCCACTTCAATGGTCCAAATACTCACCGG +
Preference number: 1 (lower is better)
Translates to: LYDCRLADFTLSCLM*ITDNSHFNGPNTHR
Trigger: CCGGTGAGTATTTGGACCATTGAAGTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAGAGTAAAGTCAGCAAGTCTACAGTCATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp AGCTGTCCGGAGCAACTGCGTAAAGCATATGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGAT +
Preference number: 1 (lower is better)
Translates to: SCPEQLRKAYAKCVL*IRSSAGLSIEISTD
Trigger: ATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCACAGGACACACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR GCA 90 bp AGGAAGAAGGAAGAAGGGAGAAGGGACTGTCACAACAGTGTTCCATaGTTGCACTCAGAAAATGGCAGAACAGTTACAACAATGAGAATC +
Preference number: 1 (lower is better)
Translates to: RKKEEGRRDCHNSVP*LHSENGRTVTTMRI
Trigger: GATTCTCATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTGACAGTCCCTTCTCCCTTCTTCCTTCTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 90 bp CAATGGTCCAAATACTCACCGGCCTTCACATTTCCATCCTGGGGATaGATCATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTA +
Preference number: 1 (lower is better)
Translates to: QWSKYSPAFTFPSWG*IIIHPNISPIPRCL
Trigger: TAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTATTTGGACCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 90 bp TTTGCATACAGTGTCCAATACATAGGGAAGATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGTGGTAGAGGCTACTGCAGGTTTCTT +
Preference number: 1 (lower is better)
Translates to: FAYSVQYIGKIASPY*SLYMLCGRGYCRFL
Trigger: AAGAAACCTGCAGTAGCCTCTACCACACAGCATGTACAAAGACCAGTATGGACTTGCTATCTTCCCTATGTATTGGACACTGTATGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR GCA 90 bp CATACTGTTAAAAGCTGCATGGTATTCACTTCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGCAATGTTATTAGATCTCAGACTCTG +
Preference number: 1 (lower is better)
Translates to: HTVKSCMVFTSTGID*SWTQLCNVIRSQTL
Trigger: CAGAGTCTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 90 bp CTGCTGCTGTTGCTTCTTTTTAATTCGAGAGTACTGCCGCTTCAGTaGATTGATATCTGTGGTCATGCGTTCCATCATCATACTGTTAAA +
Preference number: 1 (lower is better)
Translates to: LLLLLLFNSRVLPLQ*IDICGHAFHHHTVK
Trigger: TTTAACAGTATGATGATGGAACGCATGACCACAGATATCAATGCACTGAAGCGGCAGTACTCTCGAATTAAAAAGAAGCAACAGCAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 90 bp GAGAAGGGACTGTCACAACAGTGTTCCATGCTTGCACTCAGAAAATaGCAGAACAGTTACAACAATGAGAATCTTTATGCATATAGCTTT +
Preference number: 1 (lower is better)
Translates to: EKGLSQQCSMLALRK*QNSYNNENLYAYSF
Trigger: AAAGCTATATGCATAAAGATTCTCATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTGACAGTCCCTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 90 bp AAAGTGGCTCAGAAACGATGTAAAGAGAGTTTTTATATGGGGAGATaGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATG +
Preference number: 1 (lower is better)
Translates to: KVAQKRCKESFYMGR*QQLYIYSYRILNAM
Trigger: CATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTTTACATCGTTTCTGAGCCACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 90 bp CAGCAAAGAAAGTGGCTCAGAAACGATGTAAAGAGAGTTTTTATATaGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTA +
Preference number: 1 (lower is better)
Translates to: QQRKWLRNDVKRVFI*GDGSNYTSIHTESL
Trigger: TAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTTTACATCGTTTCTGAGCCACTTTCTTTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 90 bp TTTCGTTTCAGAATTAACAATCCATTAGCTCAAATTAATATTGGCTaGATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAG +
Preference number: 1 (lower is better)
Translates to: FRFRINNPLAQINIG*INNIPASIANRLPE
Trigger: CTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCCAATATTAATTTGAGCTAATGGATTGTTAATTCTGAAACGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR GCA 90 bp AAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACAATaGATGCATGTTATTGGTACACAGAGTGCTTTAATAGGAATCTGT +
Preference number: 1 (lower is better)
Translates to: KAHKLTNSHCDYLVQ*MHVIGTQSALIGIC
Trigger: ACAGATTCCTATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp CTATCAGCCCTACGGTGTCCCCACAGCCCGGATGACTCTTGGTCCTaGGCATGTTCTTTTTGTGGACTCGGATGTGAGTTCGCCACGGGG +
Preference number: 2 (lower is better)
Translates to: LSALRCPHSPDDSWS*ACSFCGLGCEFATG
Trigger: CCCCGTGGCGAACTCACATCCGAGTCCACAAAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGACACCGTAGGGCTGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCACTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 2 (lower is better)
Translates to: FELLPWGALLVALFSSGALCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGAGTATCCAGGTGCTaGGATAATTCCGGCAGCTTC +
Preference number: 2 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQRVSRC*DNSGSF
Trigger: GAAGCTGCCGGAATTATCTCAGCACCTGGATACTCT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTC +
Preference number: 2 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVGELFT*DGRMLV
Trigger: GACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGTGCCGCTGGCAGGGTaGGTGCACCCTGAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLVPLAG*VHPELS
Trigger: ACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCAC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 2 (lower is better)
Translates to: GCINNIPASIANRLPETNLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGAAGACATTTGTAAGTaGGGGCTCATATCCACCTCC +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSEDICK*GLISTS
Trigger: GGAGGTGGATATGAGCCCCCACTTACAAATGTCTTC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp AATACCTACAGTACCAGTCCCCATTCAGGTGAGCACTGGCTGCCTTaGTGGAAGAACCACTCCAACAGTTCTGCCTTCAGCCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: NTYSTSPHSGEHWLP*WKNHSNSSAFSHCP
Trigger: TGGACAGTGGCTGAAGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCAGGTCCTTGACTATCTaGATTCCCATGGAGTCATCA +
Preference number: 2 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCRSLTI*IPMESS
Trigger: TGATGACTCCATGGGAATTCAGATAGTCAAGGACCT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 2 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGCTGGTTTTGTAAAATaGCATCAAGGGACTCTGTAC +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVAGFVK*HQGTLY
Trigger: GTACAGAGTCCCTTGATGGCATTTTACAAAACCAGC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTT +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLGECLC*PQPIGL
Trigger: AAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: SVPSGDRSFESGGILVNGSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: RGAIPDPLGERELERAGVTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGCTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: SFSSSLSLALLCRPETEVLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGTCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKSRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 2 (lower is better)
Translates to: SFSSSLSLALLCRPETEVLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQRGECL*CPQPIG
Trigger: ACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCCCAGAACAGAAGGATaGACGAGAGTTAACAATCTA +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSPRTEG*TRVNNL
Trigger: TAGATTGTTAACTCTCGTCCATCCTTCTGTTCTGGG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 2 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp TTGCCTGGGATGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTaGCAGGTCATTTGGTCTCACCAGAGCAAACGACCAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: LPGMEGMERMESSDT*QVIWSHQSKRPGRK
Trigger: CTTCCTTCCTGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCATCCCAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 2 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANQSPFR*ALAAFV
Trigger: CACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 2 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: KSSVPLRIKALLERRTQTAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 2 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTCACAACATTCTATCTaGTCTCCTAATTTTGCCCAG +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSSQHSI*SPNFAQ
Trigger: CTGGGCAAAATTAGGAGAGCAGATAGAATGTTGTGA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGGGTTTTTGAGTTGCTaGCTTGGGGAGCTTTGCTGG +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRGFLSC*LGELCW
Trigger: CCAGCAAAGCTCCCCAAGGCAGCAACTCAAAAACCC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCAAGCCCGGATGACTCTTaGTCCTTGGCATGTTCTTTT +
Preference number: 2 (lower is better)
Translates to: FELLPWGALLVALFSSGASPDDS*SLACSF
Trigger: AAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCT...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATCTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCAACGTGATGGTATTTaGAGGCGGGGCCATTGGGAG +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANQRDGI*RRGHWE
Trigger: CTCCCAATGGCCCCGCCTTCAAATACCATCACGTTG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCT +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYAWQLP*EHRTTA
Trigger: AGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCTGCGGTGAAGGTCCTTaGCTATCTGAATTCCCATGG +
Preference number: 2 (lower is better)
Translates to: APHGAVEFICCFTTFYLLCGEGP*LSEFPW
Trigger: CCATGGGAATTCAGATAGTCAAGGACCTTCACCGCA...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTATGCCCGGAGATTATTaGCGAAATAGCTTTCGGGAA +
Preference number: 2 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSMPGDY*RNSFRE
Trigger: TTCCCGAAAGCTATTTCGTCAATAATCTCCGGGCAT...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAACTTGGTACAATGCATaGATGTTATTGGTACACAGA +
Preference number: 2 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVTWYNA*MLLVHR
Trigger: TCTGTGTACCAATAACATGCATGCATTGTACCAAGT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATGTGGTAGAGGCTACTaGAGGTTTCTTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVCGRGY*RFLYFL
Trigger: TAGAAAATAAAGAAACCTGCAGTAGCCTCTACCACA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTCCAAGACACCCCACTaGATTAACGACAGCATCCTC +
Preference number: 2 (lower is better)
Translates to: SVPSGDRSFESGGILVNGSKTPH*INDSIL
Trigger: GAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGTCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAG +
Preference number: 2 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWSWTQL*NVIRSQ
Trigger: CTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGA...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACCAGCCCATTGGTCTTaGTGGCCTCGTTCTGCTCAT +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVPAHWS*WPRSAH
Trigger: ATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGG...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 2 (lower is better)
Translates to: SQYICVQRALNPPIALKERPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCAACTCTGCCAATTGTaGGAAAGGGAACGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRQLCQL*ERERSH
Trigger: ATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp ATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTTCAGCCAAATAACAGGTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: MKAESIPLMMARRRG*RSEPSVQPNNRCMK
Trigger: CTTCATGCACCTGTTATTTGGCTGAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp TGGCCCTTTGTCTGCCCTGATGTACACCTGATGAACCTGCTGCTGTaGCTTCTTTTTAATTCGAGAGTACTGCCGCTTCAGTGCATTGAT +
Preference number: 2 (lower is better)
Translates to: WPFVCPDVHLMNLLL*LLFNSRVLPLQCID
Trigger: ATCAATGCACTGAAGCGGCAGTACTCTCGAATTAAAAAGAAGCAACAGCAGCAGGTTCATCAGGTGTACATCAGGGCAGACAAAGGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTTGGAGACAGGTCCTTTaGGTCAGGAGGGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLWRQVL*VRRDFS
Trigger: ACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCA...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCGCGACACCCTTAGGATaGTTTCTGAACCTTCAAAGA +
Preference number: 2 (lower is better)
Translates to: KSSVPLRIKALLERRTQTATPLG*FLNLQR
Trigger: TCTTTGAAGGTTCAGAAATCATCCTAAGGGTGTCGC...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATG +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSPQPG*LLVLGM
Trigger: CATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: GCINNIPASIANRLPETNAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 2 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGCTGTAGAATTCATCTaGTGTTTCACAACATTCTAT +
Preference number: 2 (lower is better)
Translates to: RARKGRSERELESTGAFSAVEFI*CFTTFY
Trigger: ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAG +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVELSFS*SIPLVQ
Trigger: CTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: KSSVPLRIKALLERRTQTQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGT +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLHWLPL*KNHSNS
Trigger: ACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTG...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 90 bp CAGGAAGAGGGCCCTTCCTCACCAGATACCAAATTTGCAGACACGTaGATCTTTGACTTCTCAGCCTCCAGAACTGTGAGAAAGAAATGT +
Preference number: 2 (lower is better)
Translates to: QEEGPSSPDTKFADT*IFDFSASRTVRKKC
Trigger: ACATTTCTTTCTCACAGTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCTGCAAATTTGGTATCTGGTGAGGAAGGGCCCTCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLRVPI*IVETRG
Trigger: ACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCACAACAGTGTTCCATaGTTGCACTCAGAAAATGGC +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLHNSVP*LHSENG
Trigger: GCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCATATCCACAGACAATaGCCGGAGATTATTGACGAA +
Preference number: 2 (lower is better)
Translates to: KSSVPLRIKALLERRTQTHIHRQ*PEIIDE
Trigger: TTCGTCAATAATCTCCGGGCATTGTCTGTGGATATG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGAGAATGCTGGTCACTaGCCCTTTGTCTGCCCTGAT +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYENAGH*PFVCPD
Trigger: ATCAGGGCAGACAAAGGGCCAGTGACCAGCATTCTC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTTTGAGTTGCTGCCTTaGGGAGCTTTGCTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYFELLP*GALLVA
Trigger: AGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp GAACGGTGTAATGTTGTAGGTGTATTTTTCCCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGCCATGGAATAAACAGTCTGCATGAG +
Preference number: 2 (lower is better)
Translates to: ERCNVVGVFFPQLCQ*WERERSHGINSLHE
Trigger: CTCATGCAGACTGTTTATTCCATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGGGAAAAATACACCTACAACATTACACCGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGACCCTTATACTACTGTaGAAAGGTGAGTCCAGATAC +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRTLILL*KGESRY
Trigger: GTATCTGGACTCACCTTTTCACAGTAGTATAAGGGT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALISRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSSRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 2 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGAACGGCATGAAAGCTaGCCCAATACCTACAGTACC +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKERHES*PNTYST
Trigger: GGTACTGTAGGTATTGGGTCAGCTTTCATGCCGTTC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGACCAGGGATGTGGATaGCAGCATTCTTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTDQGCG*QHSWQL
Trigger: GAGCTGCCAAGAATGCTGTCATCCACATCCCTGGTC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGCCCTGAGGGTGGTATaGAAAATAAGCCCATCTCTC +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQALRVV*KISPSL
Trigger: GAGAGATGGGCTTATTTTGCATACCACCCTCAGGGC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 2 (lower is better)
Translates to: GCINNIPASIANRLPETNQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 2 (lower is better)
Translates to: SVPSGDRSFESGGILVNGALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGTTTGTGGACAGCAATaGTACAATCCCAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLVCGQQ*YNPKDL
Trigger: CAAGTCCTTGGGATTGTACCATTGCTGTCCACAAAC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 2 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGACAAACATGAAGGCTaGGTCTATTCCTCTAATGAT +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLDKHEG*VYSSND
Trigger: ATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGQSPFR*ALAAFV
Trigger: CACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGT +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKLRVPI*IVETRG
Trigger: ACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACAGTGTTCCATGCTTaGACTCAGAAAATGGCAGAA +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLTVFHA*TQKMAE
Trigger: TTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGACAGCAAAGAAAGTaGCTCAGAAACGATGTAAAG +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRQQRK*LRNDVK
Trigger: CTTTACATCGTTTCTGAGCCACTTTCTTTGCTGTCT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCATTTTGTCCCAGTCAATaGCTATACTGTGCAAATAAT +
Preference number: 2 (lower is better)
Translates to: FELLPWGALLVALFSSGAFCPSQ*LYCANN
Trigger: ATTATTTGCACAGTATAGCCATTGACTGGGACAAAA...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGAGGATGTTAAAGCCTTaGCAGTACCCAACAGTTTTG +
Preference number: 2 (lower is better)
Translates to: SFSSSLSLALLCRPETEVRMLKP*QYPTVL
Trigger: CAAAACTGTTGGGTACTGCCAAGGCTTTAACATCCT...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGCCCATTGGTCTTGCTaGCCTCGTTCTGCTCATCTA +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNAHWSC*PRSAHL
Trigger: TAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp CAAAGGAATACAATGTCCCAAACAGCTGCAGTCCACAGGCTGACATaGCTAACTAGATTTAGATCATCTGGAGGCTTTTGTAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: QRNTMSQTAAVHRLT*LTRFRSSGGFCKRN
Trigger: GTTCCTCTTACAAAAGCCTCCAGATGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGACTGCAGCTGTTTGGGACATTGTATTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGGCATCAGAATGAGTTaGTTCCCGGCAAAAGGGCTA +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTGIRMS*FPAKGL
Trigger: TAGCCCTTTTGCCGGGAATCAACTCATTCTGATGCC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAATAAACAGTCTGCATaGGTTCATGGCTTTGCAGAA +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLNKQSA*VHGFAE
Trigger: TTCTGCAAAGCCATGAACTCATGCAGACTGTTTATT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGCTCCCAACTTCGCCTaGACTGCAGACACATCCACA +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSAPNFA*TADTST
Trigger: TGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGACTTGGTACAATGCATaGATGTTATTGGTACACAGA +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRTWYNA*MLLVHR
Trigger: TCTGTGTACCAATAACATGCATGCATTGTACCAAGT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACATGAGTTCATGGCTTTaGAGAAGATCATTCTCTAGC +
Preference number: 2 (lower is better)
Translates to: GCINNIPASIANRLPETNMSSWL*RRSFSS
Trigger: GCTAGAGAATGATCTTCTGCAAAGCCATGAACTCAT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFVFFG*TRRLWA
Trigger: TGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTCTCTAGCATCTCCTaGGTAAGGCGCCCCATGGTG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTTACCCAGGAGATGCTAGAGAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGAC +
Preference number: 2 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQMTLGP*HVLFVD
Trigger: GTCCACAAAAAGAACATGCCAAGGACCAAGAGTCAT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp AAGAAGGAAGAAGGGAGAAGGGACTGTCACAACAGTGTTCCATGCTaGCACTCAGAAAATGGCAGAACAGTTACAACAATGAGAATCTTT +
Preference number: 2 (lower is better)
Translates to: KKEEGRRDCHNSVPC*HSENGRTVTTMRIF
Trigger: AAAGATTCTCATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTGACAGTCCCTTCTCCCTTCTTCCTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: SQYICVQRALNPPIALKEPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGT +
Preference number: 2 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLFKSQE*GMGVMS
Trigger: ACTCATAACACCCATACCTCATTCCTGACTTTTAAA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCCACAATATTTATTTTaGCACAAGAATCCACTTCGT +
Preference number: 2 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLPQYLF*HKNPLR
Trigger: ACGAAGTGGATTCTTGTGGCAAAATAAATATTGTGG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGCTGGTTTTGTAAAATaGCATCAAGGGACTCTGTAC +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYAGFVK*HQGTLY
Trigger: GTACAGAGTCCCTTGATGGCATTTTACAAAACCAGC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCACATTGTGATTACTTaGTACAATGCATGCATGTTA +
Preference number: 2 (lower is better)
Translates to: NMKAESIPLMMARRRGLRHIVIT*YNACML
Trigger: TAACATGCATGCATTGTACCAAGTAATCACAATGTG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCTAAAACACTTCTGTTaGCACTTCCACACTAGAAGT +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANLKHFC*HFHTRS
Trigger: ACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGGGGAGCTTTGCTGGTaGCTTTGTTTTCTTCGGGTG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGGELCW*LCFLRV
Trigger: CACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGGAAAGTGCACAGTTaGGGTTCTTTCTGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRKVHS*GSFCRA
Trigger: GGCCCTACAGAAAGAACCCCAACTGTGCACTTTCCT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp TACAGTGTCCAATACATAGGGAAGATAGCAAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGAGGCTACTGCAGGTTTCTTTATTTT +
Preference number: 2 (lower is better)
Translates to: YSVQYIGKIASPYWS*YMLCGRGYCRFLYF
Trigger: AAAATAAAGAAACCTGCAGTAGCCTCTACCACACAGCATGTACAAAGACCAGTATGGACTTGCTATCTTCCCTATGTATTGGACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp TGCTGTTGCTTCTTTTTAATTCGAGAGTACTGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGTTCCATCATCATACTGTTAAAAGCT +
Preference number: 2 (lower is better)
Translates to: CCCFFLIREYCRFSA*ISVVMRSIIILLKA
Trigger: AGCTTTTAACAGTATGATGATGGAACGCATGACCACAGATATCAATGCACTGAAGCGGCAGTACTCTCGAATTAAAAAGAAGCAACAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALISHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGGCATCAGAATGAGTTaGTTCCCGGCAAAAGGGCTA +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVGIRMS*FPAKGL
Trigger: TAGCCCTTTTGCCGGGAATCAACTCATTCTGATGCC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGT +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVFKSQE*GMGVMS
Trigger: ACTCATAACACCCATACCTCATTCCTGACTTTTAAA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATGTGGTAGAGGCTACTaGAGGTTTCTTTATTTTCTA +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVCGRGY*RFLYFL
Trigger: TAGAAAATAAAGAAACCTGCAGTAGCCTCTACCACA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 2 (lower is better)
Translates to: REWNQVTLCRSFGLTRANSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTAATTCGAGAGTACTaGCGCTTCAGTGCATTGATA +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQLIREY*RFSALI
Trigger: TATCAATGCACTGAAGCGGCAGTACTCTCGAATTAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACAACTTCGCCTGAACTaGAGACACATCCACATCAGC +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIQLRLN*RHIHIS
Trigger: GCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTCAGACATTCAGCATTaGGAGATGGCCAGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGSDIQH*EMASRE
Trigger: TTCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGTCTGCATGAGTTCATaGCTTTGCAGAAGATCATTC +
Preference number: 2 (lower is better)
Translates to: SQYICVQRALNPPIALKEVCMSS*LCRRSF
Trigger: GAATGATCTTCTGCAAAGCCATGAACTCATGCAGAC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGGAATTGATTGCTCCTaGACTCAGCTCTGCAATGTT +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKGIDCS*TQLCNV
Trigger: AACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCTTGGGGAGCTTTGCTaGTGGCTTTGTTTTCTTCGG +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFLGELC*WLCFLR
Trigger: CCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CAA 90 bp ATCATCATACTGTTAAAAGCTGCATGGTATTCACTTCGACAGGAATaGATTGCTCCTGGACTCAGCTCTGCAATGTTATTAGATCTCAGA +
Preference number: 2 (lower is better)
Translates to: IIILLKAAWYSLRQE*IAPGLSSAMLLDLR
Trigger: TCTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTGAATACCATGCAGCTTTTAACAGTATGATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTGGAGACAGGTCCTTTaGGTCAGGAGGGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFWRQVL*VRRDFS
Trigger: ACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATGGAGACAGGTCCTTTaGGTCAGGAGGGATTTTAGT +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIWRQVL*VRRDFS
Trigger: ACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 2 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 2 (lower is better)
Translates to: ILTGLHISILGMNHNSSKARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGKLLLI*GKCTVG
Trigger: CCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 2 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACACATTGTGATTACTTaGTACAATGCATGCATGTTA +
Preference number: 2 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVHIVIT*YNACML
Trigger: TAACATGCATGCATTGTACCAAGTAATCACAATGTG...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACTGAGCTGCCTGATGTaGATAACAGATAACTCCCAC +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVLSCLM*ITDNSH
Trigger: GTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAG...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATTTTGTAAGAGGAACTaGGGTGCAGAGGCATCAGAA +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVFCKRN*GAEASE
Trigger: TTCTGATGCCTCTGCACCTCAGTTCCTCTTACAAAA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATTTCCATCCTGGGGATaGATCATAATTCATCCAAAC +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTFPSWG*IIIHPN
Trigger: GTTTGGATGAATTATGATTCATCCCCAGGATGGAAA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTATCTTTAAAACGGTCTaGTTAGGGAGGCATGTGGCA +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGIFKTV*LGRHVA
Trigger: TGCCACATGCCTCCCTAATCAGACCGTTTTAAAGAT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTT +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNVQIMI*QGQPNL
Trigger: AAGGTTTGGTTGACCTTGGCAGATCATTATTTGCAC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACAGAGTCAGAAACCACTaGATCGTGAAGACATTTGTA +
Preference number: 2 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNRVRNH*IVKTFV
Trigger: TACAAATGTCTTCACGATGCAGTGGTTTCTGACTCT...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGTTTGTGGACAGCAATaGTACAATCCCAAGGACTTG +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFVCGQQ*YNPKDL
Trigger: CAAGTCCTTGGGATTGTACCATTGCTGTCCACAAAC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACACTAAAACACTTCTGTTaGCACTTCCACACTAGAAGT +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTLKHFC*HFHTRS
Trigger: ACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAG...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 2 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 2 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTCTTAAAAGGTCTCTaGAGACAGCCATATCCACAG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFLKGL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGACCTTTTAAGAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 2 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp AAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTaGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATA +
Preference number: 2 (lower is better)
Translates to: KVGKAHKLTNSHCDY*VQCMHVIGTQSALI
Trigger: TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 90 bp CTACTGCAGGTTTCTTTATTTTCTAAAGTAGGCAAGGCTCATAAATaGACCAATTCACATTGTGATTACTTGGTACAATGCATGCATGTT +
Preference number: 2 (lower is better)
Translates to: LLQVSLFSKVGKAHK*TNSHCDYLVQCMHV
Trigger: AACATGCATGCATTGTACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGAAAATAAAGAAACCTGCAGTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 2 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 2 (lower is better)
Translates to: CIRSSAGLSIEISTDERFSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACATACTGTTAAAAGCTaGATGGTATTCACTTCGACA +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVHTVKS*MVFTST
Trigger: TGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 2 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTGATACTAAGTTTGTaGACAGCAATGGTACAATCC +
Preference number: 2 (lower is better)
Translates to: CDYLVQCMHVIGTQSALILILSL*TAMVQS
Trigger: GGATTGTACCATTGCTGTCCACAAACTTAGTATCAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACTTGCACTCAGAAAATaGCAGAACAGTTACAACAAT +
Preference number: 2 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVLALRK*QNSYNN
Trigger: ATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAG...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 72 bp GGTGGCTTTGTTTTCTTCGGGTGCACTCGGCGGCTCTaGGCAGTGCCGCTGGCAGGGTGGGTGCACCCTGAG +
Preference number: 3 (lower is better)
Translates to: GGFVFFGCTRRL*AVPLAGWVHPE
Trigger: CTCAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp GCTCCGGAGACTGCCCCTCGATCGTCCTCCTGGTACTaGCTTCAGGGCTGCTGCCTTCTCTCCCAGCTGTCG +
Preference number: 3 (lower is better)
Translates to: APETAPRSSSWY*LQGCCLLSQLS
Trigger: CGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGGGGCAGTCTCCGGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp TTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCAGTGCCGCTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LGSFAGGFVFFG*TRRLWAVPLAG
Trigger: CCCTGCCAGCGGCACTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp TCCACATCAGCATCTCCGAACACCGGCTCCGGAGACTaGCCCTCGATCGTCCTCCTGGTACTGCCTTCAGGG +
Preference number: 3 (lower is better)
Translates to: STSASPNTGSGD*PSIVLLVLPSG
Trigger: CCCTGAAGGCAGTACCAGGAGGACGATCGAGGGGCAGTCTCCGGAGCCGGTGTTCGGAGATGCTGATGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp CCTCGATCGTCCTCCTGGTACTGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCGCTGTACAACCAGAGG +
Preference number: 3 (lower is better)
Translates to: PRSSSWYCLQGC*LLSQLSLYNQR
Trigger: CCTCTGGTTGTACAGCGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp TGCTTACTCATATTCAGGAACCAGCGAGTCTGCAAATaGTGGGCAGGTCACAGGCCACCCTGCAACCCAGCG +
Preference number: 3 (lower is better)
Translates to: CLLIFRNQRVCK*WAGHRPPCNPA
Trigger: CGCTGGGTTGCAGGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCTGAATATGAGTAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 72 bp CTGGTTCAGTTCCAGGGCTCCCAACTTCGCCTGAACTaGAGACACATCCACATCAGCATCTCCGAACACCGG +
Preference number: 3 (lower is better)
Translates to: LVQFQGSQLRLN*RHIHISISEHR
Trigger: CCGGTGTTCGGAGATGCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGCCCTGGAACTGAACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp TCCCTCTGGTTCAGTTCCAGGGCTCCCAACTTCGCCTaGACTGCAGACACATCCACATCAGCATCTCCGAAC +
Preference number: 3 (lower is better)
Translates to: SLWFSSRAPNFA*TADTSTSASPN
Trigger: GTTCGGAGATGCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGCCCTGGAACTGAACCAGAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 72 bp CTTGAGAGGCGAACACAAACCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAAG +
Preference number: 3 (lower is better)
Translates to: LERRTQTSGKAQ*REQAVRSNCVK
Trigger: CTTTACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGTTCGCCTCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 72 bp ACCAGTCCCCATTCAGGTGAGCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGTTCTGCCTTCAGCCAC +
Preference number: 3 (lower is better)
Translates to: TSPHSGEHWLPL*KNHSNSSAFSH
Trigger: GTGGCTGAAGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 72 bp GGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTGAGAGGCGAACACAAA +
Preference number: 3 (lower is better)
Translates to: GSAWSPSSHPYH*GSKLSLRGEHK
Trigger: TTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 72 bp CAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTCTGCAGTCTAGAGCTG +
Preference number: 3 (lower is better)
Translates to: QVTESQVLCSGF*AEALCVCSLEL
Trigger: CAGCTCTAGACTGCAGACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 72 bp CATTGGGAGATGGCCAGCAGGGAACGGCATGAAAGCTaGCCCAATACCTACAGTACCAGTCCCCATTCAGGT +
Preference number: 3 (lower is better)
Translates to: HWEMASRERHES*PNTYSTSPHSG
Trigger: ACCTGAATGGGGACTGGTACTGTAGGTATTGGGTCAGCTTTCATGCCGTTCCCTGCTGGCCATCTCCCAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 72 bp TGCTACTTCACCTCTGTGTGGCTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGTGCTATCCCTGACCCG +
Preference number: 3 (lower is better)
Translates to: CYFTSVWLRVPI*IVETRGAIPDP
Trigger: CGGGTCAGGGATAGCACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR GCA 72 bp CCTACAGTACCAGTCCCCATTCAGGTGAGCACTGGCTaGCTTTGTGGAAGAACCACTCCAACAGTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: PTVPVPIQVSTG*LCGRTTPTVLP
Trigger: AGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 72 bp TTACTCATATTCAGGAACCAGCGAGTCTGCAAATGCTaGGCAGGTCACAGGCCACCCTGCAACCCAGCGATT +
Preference number: 3 (lower is better)
Translates to: LLIFRNQRVCKC*AGHRPPCNPAI
Trigger: AATCGCTGGGTTGCAGGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCTGAATATGAGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 72 bp TACGGTGTCCCCACAGCCCGGATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGACTCGGATGTGAGTTCG +
Preference number: 3 (lower is better)
Translates to: YGVPTARMTLGP*HVLFVDSDVSS
Trigger: CGAACTCACATCCGAGTCCACAAAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGACACCGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CTGACCCAATACCTACAGTACCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTGGAAGAACCACTCCAA +
Preference number: 3 (lower is better)
Translates to: LTQYLQYQSPFR*ALAAFVEEPLQ
Trigger: TTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGGTATTGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 72 bp TCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATGTTCTTTTTGTGGACT +
Preference number: 3 (lower is better)
Translates to: SSISPTVSPQPG*LLVLGMFFLWT
Trigger: AGTCCACAAAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGACACCGTAGGGCTGATAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 72 bp CAGCCTGAACTGAGTCAGACATTCAGCATTGGGAGATaGCCAGCAGGGAACGGCATGAAAGCTGACCCAATA +
Preference number: 3 (lower is better)
Translates to: QPELSQTFSIGR*PAGNGMKADPI
Trigger: TATTGGGTCAGCTTTCATGCCGTTCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGACTCAGTTCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTAGGGCATCCCCTTCATaGCCTTCCATCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSRASPS*PSITSR
Trigger: TCTGGAAGTGATGGAAGGCAATGAAGGGGATGCCCT...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCCCCAGCCCATTGGTCTaGCTGGCCTCGTTCTGCTCA +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLPSPLV*LASFCS
Trigger: TGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGG...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 3 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGGCAAGGCTCATAAATaGACCAATTCACATTGTGAT +
Preference number: 3 (lower is better)
Translates to: RGAIPDPLGERELERAGVGKAHK*TNSHCD
Trigger: ATCACAATGTGAATTGGTCAATTTATGAGCCTTGCC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGATTTCCGCAGGGGCTaGACGCTGGGAAAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHDFRRG*TLGKGL
Trigger: TAGCCCTTTTCCCAGCGTCAAGCCCCTGCGGAAATC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CAGAGCAAACGACCAGGAAGGAAGCAACCTTCAACGTaGTGGTATTTGAAGGCGGGGCCATTGGGAGGTAAT +
Preference number: 3 (lower is better)
Translates to: QSKRPGRKQPST*WYLKAGPLGGN
Trigger: ATTACCTCCCAATGGCCCCGCCTTCAAATACCATCACGTTGAAGGTTGCTTCCTTCCTGGTCGTTTGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 72 bp TTGGTCCTTGGCATGTTCTTTTTGTGGACTCGGATGTaGGTTCGCCACGGGGAGTTGAGCTTCGTCTTAAGG +
Preference number: 3 (lower is better)
Translates to: LVLGMFFLWTRM*VRHGELSFVLR
Trigger: CCTTAAGACGAAGCTCAACTCCCCGTGGCGAACTCACATCCGAGTCCACAAAAAGAACATGCCAAGGACCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp TTTCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGGGTTCTTTCTGTAGGG +
Preference number: 3 (lower is better)
Translates to: FPPPGLLKLLLI*GKCTVGVLSVG
Trigger: CCCTACAGAAAGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp AGCCAGGAACCCACTAAAAGGTCCAAGACACCCCACTaGATTAACGACAGCATCCTCATCGTCTGGGTCATT +
Preference number: 3 (lower is better)
Translates to: SQEPTKRSKTPH*INDSILIVWVI
Trigger: AATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGACCTTTTAGTGGGTTCCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 3 (lower is better)
Translates to: RGAIPDPLGERELERAGVQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: RGAIPDPLGERELERAGVSRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGTCAGACATTCAGCATaGGGAGATGGCCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLVRHSA*GDGQQG
Trigger: TCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGAC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTGTGAAGCGCATGGTTTaGTCCCAGTCAATGGCTATA +
Preference number: 3 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSVKRMV*SQSMAI
Trigger: TATAGCCATTGACTGGGACAAAACCATGCGCTTCAC...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGC +
Preference number: 3 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVPQLCQ*WERERS
Trigger: GCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CAAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTCAGGAAAAGCTCAGTG +
Preference number: 3 (lower is better)
Translates to: QVIRTTEDQSSP*EANTNLRKSSV
Trigger: CACTGAGCTTTTCCTGAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 72 bp AATACCTACAGTACCAGTCCCCATTCAGGTGAGCACTaGCTGCCTTTGTGGAAGAACCACTCCAACAGTTCT +
Preference number: 3 (lower is better)
Translates to: NTYSTSPHSGEH*LPLWKNHSNSS
Trigger: AGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACTGTAGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 3 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 72 bp TATCGCCAATCGTCTTCCAGAGACAAACATGAAGGCTaGGTCTATTCCTCTAATGATGGCGAGGAGAAGGGG +
Preference number: 3 (lower is better)
Translates to: YRQSSSRDKHEG*VYSSNDGEEKG
Trigger: CCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAAGACGATTGGCGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 72 bp GACCAGGAAGGAAGCAACCTTCAACGTGATGGTATTTaGAGGCGGGGCCATTGGGAGGTAATTAGGTTTAGA +
Preference number: 3 (lower is better)
Translates to: DQEGSNLQRDGI*RRGHWEVIRFR
Trigger: TCTAAACCTAATTACCTCCCAATGGCCCCGCCTTCAAATACCATCACGTTGAAGGTTGCTTCCTTCCTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 72 bp CCTTTGGTATTCCTGTGGATAGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCTGAAAACCATTTTGAC +
Preference number: 3 (lower is better)
Translates to: PLVFLWIAWQLP*EHRTTAENHFD
Trigger: GTCAAAATGGTTTTCAGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGCTATCCACAGGAATACCAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTaGAGGTCATTTGGTCTCACCAGAGCAAACGACCAG +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTL*RSFGLTRANDQ
Trigger: CTGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 3 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTTCTCCTCCATTCCTTaGGTATTCCTGTGGATAGCC +
Preference number: 3 (lower is better)
Translates to: NMKAESIPLMMARRRGLRFSSIP*VFLWIA
Trigger: GGCTATCCACAGGAATACCAAAGGAATGGAGGAGAA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 3 (lower is better)
Translates to: SVPSGDRSFESGGILVNGLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 3 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGA +
Preference number: 3 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLSPYWS*YMLCGR
Trigger: TCTACCACACAGCATGTACAAAGACCAGTATGGACT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACAGCCTGGCAACTGCCTaGAGAGCATCGTACCACTGC +
Preference number: 3 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNSLATA*RASYHC
Trigger: GCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGCT...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACTGCCTTGGGGAGCTTaGCTGGTGGCTTTGTTTTCT +
Preference number: 3 (lower is better)
Translates to: ILTGLHISILGMNHNSSKLPWGA*LVALFS
Trigger: AGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp TCACTTGGAATACCGAGAGTACTGACCTTGAGTAACTaGAGTGCTACTTCACCTCTGTGTGGCTCAGAGTTC +
Preference number: 3 (lower is better)
Translates to: SLGIPRVLTLSN*SATSPLCGSEF
Trigger: GAACTCTGAGCCACACAGAGGTGAAGTAGCACTTCAGTTACTCAAGGTCAGTACTCTCGGTATTCCAAGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 3 (lower is better)
Translates to: ILTGLHISILGMNHNSSKGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 3 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTTCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACACTTTGCAGGTCATTaGGTCTCACCAGAGCAAACG +
Preference number: 3 (lower is better)
Translates to: ILTGLHISILGMNHNSSKHFAGH*VSPEQT
Trigger: CGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAACAGGATGTTAAAGCCTaGGCAGTACCCAACAGTTTT +
Preference number: 3 (lower is better)
Translates to: RSLKTAISTDNARRLLTKQDVKA*AVPNSF
Trigger: AAAACTGTTGGGTACTGCCAAGGCTTTAACATCCTG...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGT +
Preference number: 3 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYCRFSA*ISVVMR
Trigger: ACGCATGACCACAGATATCAATGCACTGAAGCGGCA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp AAAAGAAGGTGGTTTATAACTGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTCACTGGCCCTTTGTCT +
Preference number: 3 (lower is better)
Translates to: KRRWFITGELFT*DGRMLVTGPLS
Trigger: AGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCCAGTTATAAACCACCTTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CCATTCAGCTGCAACCCTTATACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTCGGGGAGACATCATCG +
Preference number: 3 (lower is better)
Translates to: PFSCNPYTTVKR*VQIQSFGETSS
Trigger: CGATGATGTCTCCCCGAAACTTTGTATCTGGACTCACCTTTTCACAGTAGTATAAGGGTTGCAGCTGAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp CGGTGTAATGTTGTAGGTGTATTTTTCCCTCAACTCTaGCAATTGTGGGAAAGGGAACGGAGCCATGGAATA +
Preference number: 3 (lower is better)
Translates to: RCNVVGVFFPQL*QLWERERSHGI
Trigger: TATTCCATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGGGAAAAATACACCTACAACATTACACCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 72 bp AAAACAGGCTGTAGGCGTGGCTGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGCACAGAATTCAAGACC +
Preference number: 3 (lower is better)
Translates to: KTGCRRGCFLRS*MLTSDGTEFKT
Trigger: GGTCTTGAATTCTGTGCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCCTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 72 bp AGTGTCCAATACATAGGGAAGATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGTGGTAGAGGCTACTGC +
Preference number: 3 (lower is better)
Translates to: SVQYIGKIASPY*SLYMLCGRGYC
Trigger: GCAGTAGCCTCTACCACACAGCATGTACAAAGACCAGTATGGACTTGCTATCTTCCCTATGTATTGGACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 72 bp AGTCAGAAACCACTGCATCGTGAAGACATTTGTAAGTaGGGGCTCATATCCACCTCCACTTTCTTTGTTTGC +
Preference number: 3 (lower is better)
Translates to: SQKPLHREDICK*GLISTSTFFVC
Trigger: GCAAACAAAGAAAGTGGAGGTGGATATGAGCCCCCACTTACAAATGTCTTCACGATGCAGTGGTTTCTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGAGAACTGGAAGGTTaGGGGGTGCTGTCACAGGGA +
Preference number: 3 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRELEG*GVLSQG
Trigger: TCCCTGTGACAGCACCCCCAAACCTTCCAGTTCTCT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 3 (lower is better)
Translates to: GCINNIPASIANRLPETNNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAATCATTAACCATTTCCTaGAACCCAGACCATCAGGGA +
Preference number: 3 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQSLTIS*NPDHQG
Trigger: TCCCTGATGGTCTGGGTTCAAGGAAATGGTTAATGA...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATACTCCCTTTCTCCATaGTGTGAGGACACAGTGAGA +
Preference number: 3 (lower is better)
Translates to: ILTGLHISILGMNHNSSKYSLSP*CEDTVR
Trigger: TCTCACTGTGTCCTCACACAATGGAGAAAGGGAGTA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGCTTTGCTGGTGGCTTaGTTTTCTTCGGGTGCACTC +
Preference number: 3 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNALLVA*FSSGAL
Trigger: GAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp ACAGTTTCTGTCCTAGCAAGCTGGTATGTGCATGCTTaGGTATTAGTAACACCCAGAGAACTGGAAGGTTTG +
Preference number: 3 (lower is better)
Translates to: TVSVLASWYVHA*VLVTPRELEGL
Trigger: CAAACCTTCCAGTTCTCTGGGTGTTACTAATACTCAAGCATGCACATACCAGCTTGCTAGGACAGAAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR TCA 72 bp AAATACTCACCGGCCTTCACATTTCCATCCTGGGGATaGATCATAATTCATCCAAACATCTCCCCTATTCCC +
Preference number: 3 (lower is better)
Translates to: KYSPAFTFPSWG*IIIHPNISPIP
Trigger: GGGAATAGGGGAGATGTTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 72 bp GTCCCAGTCAATGGCTATACTGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTTTCTCCTCCATTCCTT +
Preference number: 3 (lower is better)
Translates to: VPVNGYTVQIMI*QGQPNLSPPFL
Trigger: AAGGAATGGAGGAGAAAGGTTTGGTTGACCTTGGCAGATCATTATTTGCACAGTATAGCCATTGACTGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp ACTTCGACAGGAATTGATTGCTCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAGACTCTGCTCCTCATT +
Preference number: 3 (lower is better)
Translates to: TSTGIDCSWTQL*NVIRSQTLLLI
Trigger: AATGAGGAGCAGAGTCTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 3 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 3 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 3 (lower is better)
Translates to: ILTGLHISILGMNHNSSKPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 3 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGTCCACAGGCTGACATaGCTAACTAGATTTAGATCA +
Preference number: 3 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVVHRLT*LTRFRS
Trigger: TGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGAC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGTCAGACATTCAGCATaGGGAGATGGCCAGCAGGGA +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGVRHSA*GDGQQG
Trigger: TCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGAC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCTCTTTAATTTGTTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 3 (lower is better)
Translates to: NMKAESIPLMMARRRGLRLFNLF*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CTCACCAGATACCAAATTTGCAGACACGTTGATCTTTaGCTTCTCAGCCTCCAGAACTGTGAGAAAGAAATG +
Preference number: 3 (lower is better)
Translates to: LTRYQICRHVDL*LLSLQNCEKEM
Trigger: CATTTCTTTCTCACAGTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCTGCAAATTTGGTATCTGGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR GCA 72 bp GAGCAACTGCGTAAAGCATATGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGGTTATCGATTGAAATT +
Preference number: 3 (lower is better)
Translates to: EQLRKAYAKCVL*IRSSAGLSIEI
Trigger: AATTTCAATCGATAACCCAGCTGAAGATCTTATGCACAGGACACACTTGGCATATGCTTTACGCAGTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CCA 72 bp TGTAGACTTGCTGACTTTACTCTGAGCTGCCTGATGTaGATAACAGATAACTCCCACTTCAATGGTCCAAAT +
Preference number: 3 (lower is better)
Translates to: CRLADFTLSCLM*ITDNSHFNGPN
Trigger: ATTTGGACCATTGAAGTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAGAGTAAAGTCAGCAAGTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 3 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGAAGCTCCTACTCATTaGAGGAAAGTGCACAGTTGG +
Preference number: 3 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNEAPTH*RKVHSW
Trigger: CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR GCA 72 bp AAAAGCTGCATGGTATTCACTTCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGCAATGTTATTAGATCT +
Preference number: 3 (lower is better)
Translates to: KSCMVFTSTGID*SWTQLCNVIRS
Trigger: AGATCTAATAACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTGAATACCATGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 72 bp TGCCACAAGAATCCACTTCGTCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTAACTCCTATTATAAAA +
Preference number: 3 (lower is better)
Translates to: CHKNPLRQLASS*ENSPVLTPIIK
Trigger: TTTTATAATAGGAGTTAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTGACGAAGTGGATTCTTGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 3 (lower is better)
Translates to: REWNQVTLCRSFGLTRANLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 3 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 3 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 3 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGGATTACTCCTTTCATaGAAAGTGAAGCGCATGGTT +
Preference number: 3 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNGLLLS*KVKRMV
Trigger: AACCATGCGCTTCACTTTCAATGAAAGGAGTAATCC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR CCA 72 bp CTGTCACAACAGTGTTCCATGCTTGCACTCAGAAAATaGCAGAACAGTTACAACAATGAGAATCTTTATGCA +
Preference number: 3 (lower is better)
Translates to: LSQQCSMLALRK*QNSYNNENLYA
Trigger: TGCATAAAGATTCTCATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 3 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAAGGGCACAGCATGTGTaGTTGATACTAAGTTTGTGG +
Preference number: 3 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIRAQHV*LILSLW
Trigger: CCACAAACTTAGTATCAACAACACATGCTGTGCCCT...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGAATCAAGTGACACTTaGCAGGTCATTTGGTCTCAC +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGESSDT*QVIWSH
Trigger: GTGAGACCAAATGACCTGCAAAGTGTCACTTGATTC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATGGATGACAGCATTCTaGGCAGCTCTGTTAGTCATT +
Preference number: 3 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIWMTAF*AALLVI
Trigger: AATGACTAACAGAGCTGCCAAGAATGCTGTCATCCA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
3UTR TCA 72 bp CTGTCTCTACTACTATCTAATCAGAAACCTCCTATTTaGCAAGGTACTGGTTATGTGAATTCTGGCATGAAC +
Preference number: 3 (lower is better)
Translates to: LSLLLSNQKPPI*QGTGYVNSGMN
Trigger: GTTCATGCCAGAATTCACATAACCAGTACCTTGTCAAATAGGAGGTTTCTGATTAGATAGTAGTAGAGACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 3 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 3 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 3 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 72 bp GAGTGTTCATTATCACTGCTTCTAAAACACTTCTGTTaGCACTTCCACACTAGAAGTCATAGAAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: ECSLSLLLKHFC*HFHTRSHRKEK
Trigger: TTTTTCCTTTCTATGACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAGAAGCAGTGATAATGAACACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 3 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGGCAAGGCTCATAAATaGACCAATTCACATTGTGAT +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGGKAHK*TNSHCD
Trigger: ATCACAATGTGAATTGGTCAATTTATGAGCCTTGCC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAAGTACTTCTGGTGTTaGCATACAGTGTCCAATACA +
Preference number: 3 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGKYFWC*HTVSNT
Trigger: TGTATTGGACACTGTATGCAAACACCAGAAGTACTT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CCA 72 bp CAGAAACGATGTAAAGAGAGTTTTTATATGGGGAGATaGCAGCAACTATACATCTATTCATACAGAATCCTT +
Preference number: 3 (lower is better)
Translates to: QKRCKESFYMGR*QQLYIYSYRIL
Trigger: AAGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTTTACATCGTTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR TCA 72 bp AACATCTTACTTAATGCTTCTTTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGTGTTCATTATCACTGC +
Preference number: 3 (lower is better)
Translates to: NILLNASFKSQE*GMGVMSVHYHC
Trigger: GCAGTGATAATGAACACTCATAACACCCATACCTCATTCCTGACTTTTAAAAGAAGCATTAAGTAAGATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCTACCTGGGGCCACCTaGTGCCCGGGCCCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVLPGAT*CPGPAS
Trigger: AGAGGCCGGGCCCGGGCAGCAGGTGGCCCCAGGTAG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGGCGGCTCTGGGCAGTaGCGCTGGCAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVGGSGQ*RWQGGC
Trigger: GCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGGCGGCTCTGGGCAGTaGCGCTGGCAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSGGSGQ*RWQGGC
Trigger: GCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGGCGGCCCCCGCCGGTaGGAAGGACGTCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSGGPRR*EGRPWS
Trigger: GGACCATGGACGTCCTTCCCACCGGCGGGGGCCGCC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGTGAGTGTCTGCGGCTaGCCGGCCCGTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSVSVCG*PARGSR
Trigger: CCTGCTCCCACGGGCCGGTCAGCCGCAGACACTCAC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACGCTACCCCACTCGCTaGGCGGCTGAGCTCGCGGAG +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVRYPTR*AAELAE
Trigger: CTCCGCGAGCTCAGCCGCTCAGCGAGTGGGGTAGCG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCGCACAGCCGGCTGGTaGTGGAGGGTCACGGGGACT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVRTAGW*WRVTGT
Trigger: AGTCCCCGTGACCCTCCAGCACCAGCCGGCTGTGCG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCACCGGCTCCGGAGACTaGCCCTCGATCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCTGSGD*PSIVLL
Trigger: CAGGAGGACGATCGAGGGGCAGTCTCCGGAGCCGGT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 4 (lower is better)
Translates to: LSLLATVRTTACAVKVLDLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGCACATTGCTCAGGATaGTGCCCACGCCGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVAHCSG*CPRRRP
Trigger: AGGGCGGCGGCGTGGGCACCATCCTGAGCAATGTGC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVSPQPG*LLVLGM
Trigger: CATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQSRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCCCACGCCGCCGCCCTaGCGCTTCAGGCATCTCCCC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTPTPPP*RFRHLP
Trigger: GGGGAGATGCCTGAAGCGGCAGGGCGGCGGCGTGGG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQRGECL*CPQPIG
Trigger: ACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVCLQGC*LLSQLS
Trigger: CGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGGGCGAGAAGGAGACTaGCACGCCACTGAGCTACCT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVGREGD*HATELP
Trigger: AGGTAGCTCAGTGGCGTGGCAGTCTCCTTCTCGCCC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAACAGCCGGCTGGTGCTaGAGGGTCACGGGGACTTAC +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVTAGWC*RVTGTY
Trigger: GTAAGTCCCCGTGACCCTCCAGCACCAGCCGGCTGT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCT +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQAWQLP*EHRTTA
Trigger: AGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATTGTGGACTCGGATGTaGGTTCGCCACGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQLWTRM*VRHGEL
Trigger: CAACTCCCCGTGGCGAACTCACATCCGAGTCCACAA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSSPQPG*LLVLGM
Trigger: CATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CTTGCTGGCCTCGTTCTGCTCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGCAGCAGGGAACGGCATaGAAGCTGACCCAATACCTA +
Preference number: 4 (lower is better)
Translates to: LAGLVLLIYQPYGVPTARQQGTA*KLTQYL
Trigger: TAGGTATTGGGTCAGCTTTCATGCCGTTCCCTGCTG...CCGGGCTGTGGGGACACCGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCGCTCCTGCAGCTCCTaGAGCACGCGGGAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTRSCSS*STRESP
Trigger: CGGCGACTCCCGCGTGCTGCAGGAGCTGCAGGAGCG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGGCGGCTCTGGGCAGTaGCGCTGGCAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGGGSGQ*RWQGGC
Trigger: GCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCAWQLP*EHRTTA
Trigger: AGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVAWQLP*EHRTTA
Trigger: AGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGACCAGGGATGTGGATaGCAGCATTCTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVDQGCG*QHSWQL
Trigger: GAGCTGCCAAGAATGCTGTCATCCACATCCCTGGTC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CTTGCTGGCCTCGTTCTGCTCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 4 (lower is better)
Translates to: LAGLVLLIYQPYGVPTARDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...CCGGGCTGTGGGGACACCGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCQSPFR*ALAAFV
Trigger: CACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACCTGAGACGGGAGAATaGTGGTCACTGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQPETGE*WSLALC
Trigger: ACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCCAGCCCATTGGTCTTaGTGGCCTCGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVPAHWS*WPRSAH
Trigger: ATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGGCGGCTCTGGGCAGTaGCGCTGGCAGGGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLGGSGQ*RWQGGC
Trigger: GCACCCACCCTGCCAGCGGCACTGCCCAGAGCCGCC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCAGCGAGTCTGCAAATaGTGGGCAGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCQRVCK*WAGHRP
Trigger: TGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGGAACCAGCGAGTCTaGAAATGCTGGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQRNQRV*KCWAGH
Trigger: GTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCGGGGCTGGGGGAGCTaGAGGAATCGTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSRGWGS*RNRFFL
Trigger: GAGGAAGAAACGATTCCTGCAGCTCCCCCAGCCCCG...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATTCAGCATTGGGAGATaGCCAGCAGGGAACGGCATG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQFSIGR*PAGNGM
Trigger: CATGCCGTTCCCTGCTGGCCATCTCCCAATGCTGAA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTaGTTTTCTTCGGGTGCACTCGGCGGCTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: FELLPWGALLVA*FSSGALGGSGQ
Trigger: CTGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGCTCCCAACTTCGCCTaGACTGCAGACACATCCACA +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCAPNFA*TADTST
Trigger: TGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CTTGCTGGCCTCGTTCTGCTCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGAGACACGTTGATCTTTaGCTTCTCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: LAGLVLLIYQPYGVPTARRHVDL*LLSLQN
Trigger: GTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCT...CCGGGCTGTGGGGACACCGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCCTGAGACGGGAGAATaGTGGTCACTGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCPETGE*WSLALC
Trigger: ACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWGECLC*PQPIGL
Trigger: AAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCC...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGGGTTTTTGAGTTGCTaGCTTGGGGAGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVGFLSC*LGELCW
Trigger: CCAGCAAAGCTCCCCAAGGCAGCAACTCAAAAACCC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAGGAACCAGCGAGTCTaGAAATGCTGGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVRNQRV*KCWAGH
Trigger: GTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAATCTGGATCCCCGAGGTaGCCGGGCCTCCCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQSGSPR*PGLPRA
Trigger: GGCTCGGGGGAGGCCCGGGCACCTCGGGGATCCAGA...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACTCACCAGGGACGCCGTaGGGCTTGTGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANSPGTP*GLCGRR
Trigger: GCGGCGGCCGCACAAGCCGCACGGCGTCCCTGGTGA...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR CCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCGGCTGACCGGCCCGTaGGAGCAGGGAGCGCACAGC +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANRLTGP*EQGAHS
Trigger: GCTGTGCGCTCCCTGCTCCCACGGGCCGGTCAGCCG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTCTCTAGCATCTCCTaGGTAAGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVFSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTTACCCAGGAGATGCTAGAGAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGGGGAGCTTTGCTGGTaGCTTTGTTTTCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQGELCW*LCFLRV
Trigger: CACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTGGGAAGGACGTCCATaGTCCCCGGCGCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLWEGRP*SPARGC
Trigger: GCAGCCGCGCGCCGGGGACCATGGACGTCCTTCCCA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCGCAGGTACAGCATCTaGTGCCGCTGGCTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLRRYSI*CRWLGR
Trigger: GCGACCGAGCCAGCGGCATCAGATGCTGTACCTGCG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATGCGGTGAAGGTCCTTaGCTATCTGAATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQCGEGP*LSEFPW
Trigger: CCATGGGAATTCAGATAGTCAAGGACCTTCACCGCA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWQSPFR*ALAAFV
Trigger: CACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTG...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTGCTGGCCTCGTTCTaGTCATCTATCAGCCCTACG +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVLLASF*SSISPT
Trigger: CGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCTTGCTGGCCTCGTTCTaGTCATCTATCAGCCCTACG +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCLLASF*SSISPT
Trigger: CGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAA...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTACCGGCTCCGGAGACTaGCCCTCGATCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLTGSGD*PSIVLL
Trigger: CAGGAGGACGATCGAGGGGCAGTCTCCGGAGCCGGT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCELSFS*SIPLVQ
Trigger: CTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSELSFS*SIPLVQ
Trigger: CTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCAGGTGAGCACTGGCTaGCTTTGTGGAAGAACCACT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCQVSTG*LCGRTT
Trigger: AGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCAGGTGAGCACTGGCTaGCTTTGTGGAAGAACCACT +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSQVSTG*LCGRTT
Trigger: AGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGAGCGCCCCGGGCTCTaGCACGGCTACCGTCCGTCT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQERPGL*HGYRPS
Trigger: AGACGGACGGTAGCCGTGCCAGAGCCCGGGGCGCTC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGCCCATTGGTCTTGCTaGCCTCGTTCTGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCAHWSC*PRSAHL
Trigger: TAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATCTGGGCAGTGCCGCTaGCAGGGTGGGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVSGQCR*QGGCTL
Trigger: CAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCTTGGGGAGCTTTGCTaGTGGCTTTGTTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVLGELC*WLCFLR
Trigger: CCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTTGAGTTGCTGCCTTaGGGAGCTTTGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVFELLP*GALLVA
Trigger: AGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAGCCCGAGGCCTCGGTaGAGCTGTCGAGGCTGTCGC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLSPRPR*SCRGCR
Trigger: GCGACAGCCTCGACAGCTCCACCGAGGCCTCGGGCT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR TCA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACCACTTCGACAGGAATTaGTTGCTCCTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LSLLATVRTTACAVKVLDHFDRN*LLLDSA
Trigger: AGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTG...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAGGGTGGGTGCACCCTaGGCTCAGTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTRVGAP*AQFQLQ
Trigger: CTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGTAATTAGGTTTAGATaGCACCAGGAGGATGGGACC +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQVIRFR*HQEDGT
Trigger: GGTCCCATCCTCCTGGTGTCATCTAAACCTAATTAC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCATTGCTCAGGATGGTaGCCACGCCGCCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKHCSGW*PRRRPA
Trigger: GGCAGGGCGGCGGCGTGGGCACCATCCTGAGCAATG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCTCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCSTGID*SWTQLC
Trigger: GCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGA...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTTGCTGGCCTCGTTCTaGTCATCTATCAGCCCTACG +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLLASF*SSISPT
Trigger: CGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGATGCCGAAGTAACTTaGCCGACTGGATGCCAATTC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSDAEVT*PTGCQF
Trigger: GAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACAACTCTGCCAATTGTaGGAAAGGGAACGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVQLCQL*ERERSH
Trigger: ATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACTTCATCACTGTCTCTaGCCTTACTATGTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQLHHCL*PYYVVQ
Trigger: CTGGACGACATAGTAAGGCCAGAGACAGTGATGAAG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCTCAGACATTCAGCATTaGGAGATGGCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCSDIQH*EMASRE
Trigger: TTCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGA...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp AGTACCAGTCCCCATTCAGGTGAGCACTGGCTGCCTTaGTGGAAGAACCACTCCAACAGTTCTGCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: STSPHSGEHWLP*WKNHSNSSAFS
Trigger: GCTGAAGGCAGAACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGCGACACCCTTAGGATaGTTTCTGAACCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQATPLG*FLNLQR
Trigger: TCTTTGAAGGTTCAGAAATCATCCTAAGGGTGTCGC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTTGTGGACTCGGATGTaGGTTCGCCACGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLWTRM*VRHGEL
Trigger: CAACTCCCCGTGGCGAACTCACATCCGAGTCCACAA...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGGGTGGGTGCACCCTaGGCTCAGTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRVGAP*AQFQLQ
Trigger: CTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATGGAGACAGGTCCTTTaGGTCAGGAGGGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVWRQVL*VRRDFS
Trigger: ACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCTGGAGACAGGTCCTTTaGGTCAGGAGGGATTTTAGT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCWRQVL*VRRDFS
Trigger: ACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCA...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGCAGAGGCATCAGAATaGGTTGATTCCCGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSAEASE*VDSRQK
Trigger: CTTTTGCCGGGAATCAACTCATTCTGATGCCTCTGC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACAGCCTCCAGAACTGTaGGAAAGAAATGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQQPPEL*ERNVCV
Trigger: AACACAGACATTTCTTTCTCACAGTTCTGGAGGCTG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACAGACTGCCACGCCACTaGGCTACCTGGGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANRLPRH*ATWGHL
Trigger: CAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTCT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCAAGCCAGCAGGCATCTaGAGTGCGGAGCCTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGKPAGI*SAEPAR
Trigger: CCTTGCAGGCTCCGCACTGCAGATGCCTGCTGGCTT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGGECLC*PQPIGL
Trigger: AAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAACCGGCTCCGGAGACTaGCCCTCGATCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVTGSGD*PSIVLL
Trigger: CAGGAGGACGATCGAGGGGCAGTCTCCGGAGCCGGT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTCTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGAGCGCACAGCCGGCTaGTGCTGGAGGGTCACGGGG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEERTAG*CWRVTG
Trigger: CCCCGTGACCCTCCAGCACCAGCCGGCTGTGCGCTC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGCTGCAGCATCCCTCTaGTTCAGTTCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRAAASL*FSSRAP
Trigger: GGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGTGCCGCTGGCAGGGTaGGTGCACCCTGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCVPLAG*VHPELS
Trigger: ACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCAC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCCGAGTCTGCAAATGCTaGGCAGGTCACAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGRVCKC*AGHRPP
Trigger: GGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCG...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCAGCCACCTCAGTCTATaGTACTTTGTTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSSHLSL*YFVTAA
Trigger: GGCTGCTGTAACAAAGTACCATAGACTGAGGTGGCT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCAGGTCCTTGACTATCTaGATTCCCATGGAGTCATCA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSRSLTI*IPMESS
Trigger: TGATGACTCCATGGGAATTCAGATAGTCAAGGACCT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCATGCCCGGAGATTATTaGCGAAATAGCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSMPGDY*RNSFRE
Trigger: TTCCCGAAAGCTATTTCGTCAATAATCTCCGGGCAT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTTCTTAAAAGGTCTCTaGAGACAGCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVFLKGL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGACCTTTTAAGAA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAATCTTTAAAACGGTCTaGTTAGGGAGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVIFKTV*LGRHVA
Trigger: TGCCACATGCCTCCCTAATCAGACCGTTTTAAAGAT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCACCGCCGGGTTTGCTaGAGCTCCTACTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTHRRVC*SSYSFE
Trigger: CTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGACCCTTATACTACTGTaGAAAGGTGAGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVTLILL*KGESRY
Trigger: GTATCTGGACTCACCTTTTCACAGTAGTATAAGGGT...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVSRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATCTAGAGCTGGTGGGTaGGTGAGCTGTGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: RSLKTAISTDNARRLLTKSRAGG*VSCVVG
Trigger: CCCCACCACACAGCTCACTCACCCACCAGCTCTAGA...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CTTGCTGGCCTCGTTCTGCTCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGGCAAAGAAAAGGATATaGGGTGGAAACACTATTATC +
Preference number: 4 (lower is better)
Translates to: LAGLVLLIYQPYGVPTARAKKRI*GGNTII
Trigger: GATAATAGTGTTTCCACCTCATATCCTTTTCTTTGC...CCGGGCTGTGGGGACACCGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCAGTCCCCATTCAGGTaGGCACTGGCTGCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLQSPFR*ALAAFV
Trigger: CACAAAGGCAGCCAGTGCTCACCTGAATGGGGACTG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAGACACGTTGATCTTTaGCTTCTCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSRHVDL*LLSLQN
Trigger: GTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCATATCCACAGACAATaGCCGGAGATTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVHIHRQ*PEIIDE
Trigger: TTCGTCAATAATCTCCGGGCATTGTCTGTGGATATG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACATATCCACAGACAATaGCCGGAGATTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQHIHRQ*PEIIDE
Trigger: TTCGTCAATAATCTCCGGGCATTGTCTGTGGATATG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQSWTQL*NVIRSQ
Trigger: CTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLRGECL*CPQPIG
Trigger: ACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLCLQGC*LLSQLS
Trigger: CGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHCLQGC*LLSQLS
Trigger: CGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAACCGGCTCCGGAGACTaGCCCTCGATCGTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKTGSGD*PSIVLL
Trigger: CAGGAGGACGATCGAGGGGCAGTCTCCGGAGCCGGT...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGTTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCACAACAGTGTTCCATaGTTGCACTCAGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSHNSVP*LHSENG
Trigger: GCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCCCCTTTTCCGCCACTaGCTGATGCCTCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKPLFRH*LMPPSR
Trigger: CCTGGAGGGAGGCATCAGGCAGTGGCGGAAAAGGGG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGGGTTTAACTGTGGCTaGGAACGGTGTAATGTTGTA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSGFNCG*ERCNVV
Trigger: TACAACATTACACCGTTCCCAGCCACAGTTAAACCC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACCTCGATCGTCCTCCTaGTACTGCCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVPRSSS*YCLQGC
Trigger: GCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCCTCGATCGTCCTCCTaGTACTGCCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNPRSSS*YCLQGC
Trigger: GCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGCTGCAGCATCCCTCTaGTTCAGTTCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVAAASL*FSSRAP
Trigger: GGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGTGCCGCTGGCAGGGTaGGTGCACCCTGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYVPLAG*VHPELS
Trigger: ACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCAC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGTGCCGCTGGCAGGGTaGGTGCACCCTGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKVPLAG*VHPELS
Trigger: ACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCAC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAATCTGGGCAGTGCCGCTaGCAGGGTGGGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKESGQCR*QGGCTL
Trigger: CAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGA...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGGAGATAGAGCTTATTaGGCTGTTTCCCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSGDRAY*AVSLVH
Trigger: ATGAACCAGGGAAACAGCCCAATAAGCTCTATCTCC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAACGAGTCTGCAAATGCTaGGCAGGTCACAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: RSLKTAISTDNARRLLTKRVCKC*AGHRPP
Trigger: GGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCG...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCTGAGCTGCCTGATGTaGATAACAGATAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLSCLM*ITDNSH
Trigger: GTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAG...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGATCACTGTATCCTGGTaGCTCTATGACTGTAGACTT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVITVSW*LYDCRL
Trigger: AAGTCTACAGTCATAGAGCCACCAGGATACAGTGAT...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGCCTGGCAACTGCCTTaGGAGCATCGTACCACTGCT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVAWQLP*EHRTTA
Trigger: AGCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTGTGGACTCGGATGTaGGTTCGCCACGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHLWTRM*VRHGEL
Trigger: CAACTCCCCGTGGCGAACTCACATCCGAGTCCACAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCSPQPG*LLVLGM
Trigger: CATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGCTCCCAACTTCGCCTaGACTGCAGACACATCCACA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGAPNFA*TADTST
Trigger: TGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAGGGTGGGTGCACCCTaGGCTCAGTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQRVGAP*AQFQLQ
Trigger: CTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGAGGGTGGGTGCACCCTaGGCTCAGTTTCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKRVGAP*AQFQLQ
Trigger: CTGCAGCTGAAACTGAGCTCAGGGTGCACCCACCCT...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCACCCTTATACTACTGTaGAAAGGTGAGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSTLILL*KGESRY
Trigger: GTATCTGGACTCACCTTTTCACAGTAGTATAAGGGT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCAACGTGATGGTATTTaGAGGCGGGGCCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLQRDGI*RRGHWE
Trigger: CTCCCAATGGCCCCGCCTTCAAATACCATCACGTTG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGAGAATGGAATCAAGTaGCACTTTGCAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVENGIK*HFAGHL
Trigger: CAAATGACCTGCAAAGTGTCACTTGATTCCATTCTC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATGGCTCGGTCGCTCCTaGAGCTCCTGCAGCACGCGG +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKWLGRS*SSCSTR
Trigger: CCGCGTGCTGCAGGAGCTGCAGGAGCGACCGAGCCA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTACTTGGCCGACTGGATaGCAATTCTGTACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSTWPTG*QFCTLA
Trigger: AGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCAGAAGCCTATCTTTCTaGTTCAGATGCCGAAGTAAC +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCRSLSF*FRCRSN
Trigger: GTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAATATCACAGTTCCTCTaGACTTTATGCAGAAGCCTA +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQISQFL*TLCRSL
Trigger: TAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATAT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACATATCCACAGACAATaGCCGGAGATTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVHIHRQ*PEIIDE
Trigger: TTCGTCAATAATCTCCGGGCATTGTCTGTGGATATG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVSWTQL*NVIRSQ
Trigger: CTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCATCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FELLPWGALLVALFSSGASTGID*SWTQLC
Trigger: GCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGA...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCCAGCCCATTGGTCTTaGTGGCCTCGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLPAHWS*WPRSAH
Trigger: ATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQGECLC*PQPIGL
Trigger: AAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCCACTCCAACAGTTCTaGCTTCAGCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLPLQQF*LQPLSS
Trigger: GCTGGACAGTGGCTGAAGGCAGAACTGTTGGAGTGG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCAATCAAGTGACACTTTaGAGGTCATTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCNQVTL*RSFGLT
Trigger: GGTGAGACCAAATGACCTGCAAAGTGTCACTTGATT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAAGTCGCCGGCACCGCTaGGGCCGCCCAGGACCACGT +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALISRRHR*GRPGPR
Trigger: ACGTGGTCCTGGGCGGCCGCAGCGGTGCCGGCGACT...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAGTAACTTGGCCGACTaGATGCCAATTCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVSNLAD*MPILYF
Trigger: AAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTTCTCTAGCATCTCCTaGGTAAGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGFSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTTACCCAGGAGATGCTAGAGAA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGAGACGGGAGAATGCTaGTCACTGGCCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLETGEC*SLALCL
Trigger: CAGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACTCTGGGCAGTGCCGCTaGCAGGGTGGGTGCACCCTG +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNSGQCR*QGGCTL
Trigger: CAGGGTGCACCCACCCTGCCAGCGGCACTGCCCAGA...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TCCAAGACACCCCACTGCATTAACGACAGCATCCTCATCGTCTGGGTCATTCTCCTTGGGGAGCTTTGCTaGTGGCTTTGTTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SKTPHCINDSILIVWVILLGELC*WLCFLR
Trigger: CCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAG...GAGAATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTTTGAGTTGCTGCCTTaGGGAGCTTTGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTFELLP*GALLVA
Trigger: AGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCCCAGAACAGAAGGATaGACGAGAGTTAACAATCTA +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCPRTEG*TRVNNL
Trigger: TAGATTGTTAACTCTCGTCCATCCTTCTGTTCTGGG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACTTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 4 (lower is better)
Translates to: LSLLATVRTTACAVKVLDLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCTAAAACACTTCTGTTaGCACTTCCACACTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVLKHFC*HFHTRS
Trigger: ACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCATCACTGTATCCTGGTaGCTCTATGACTGTAGACTT +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSITVSW*LYDCRL
Trigger: AAGTCTACAGTCATAGAGCCACCAGGATACAGTGAT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTACTTTGCAGGTCATTTaGTCTCACCAGAGCAAACGA +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSTLQVI*SHQSKR
Trigger: TCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp GTTTCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTaGAGGAAAGTGCACAGTTGGGGTTCTTTCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VSTAGFAEAPTH*RKVHSWGSFCR
Trigger: CCTACAGAAAGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATGCAGCTGCGCTTCTTaGGCACATTGCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVCSCAS*AHCSGW
Trigger: CCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR TCA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGATGCCCGGAGATTATTaGCGAAATAGCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWMPGDY*RNSFRE
Trigger: TTCCCGAAAGCTATTTCGTCAATAATCTCCGGGCAT...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCGCCGCTTCAGTGCATTaGTATCTGTGGTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTAASVH*YLWSCV
Trigger: AACGCATGACCACAGATATCAATGCACTGAAGCGGC...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRGELFT*DGRMLV
Trigger: GACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGACCAGGGATGTGGATaGCAGCATTCTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHDQGCG*QHSWQL
Trigger: GAGCTGCCAAGAATGCTGTCATCCACATCCCTGGTC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTTGTGGACTCGGATGTaGGTTCGCCACGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCLWTRM*VRHGEL
Trigger: CAACTCCCCGTGGCGAACTCACATCCGAGTCCACAA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGTAAGGCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATGCTCCCAACTTCGCCTaGACTGCAGACACATCCACA +
Preference number: 4 (lower is better)
Translates to: GKAPHGAVEFICCFTTFYAPNFA*TADTST
Trigger: TGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGC...ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGACAAACATGAAGGCTaGGTCTATTCCTCTAATGAT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCDKHEG*VYSSND
Trigger: ATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCGGCATCAGAATGAGTTaGTTCCCGGCAAAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTGIRMS*FPAKGL
Trigger: TAGCCCTTTTGCCGGGAATCAACTCATTCTGATGCC...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGCTGTACAGCTCGTTaGGCAGCCCGCTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKESCTAR*AARSPG
Trigger: CCCTGGTGAGCGGGCTGCTCAACGAGCTGTACAGCT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR TCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCAACTCTTCTCTTCTGTaGCACAGCCTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGNSSLL*HSLQAG
Trigger: GCCTGCTTGCAGGCTGTGTCACAGAAGAGAAGAGTT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCAGAGTCAGAAACCACTaGATCGTGAAGACATTTGTA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSRVRNH*IVKTFV
Trigger: TACAAATGTCTTCACGATGCAGTGGTTTCTGACTCT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAGAGTCAGAAACCACTaGATCGTGAAGACATTTGTA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVRVRNH*IVKTFV
Trigger: TACAAATGTCTTCACGATGCAGTGGTTTCTGACTCT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCATGAGTTCATGGCTTTaGAGAAGATCATTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCMSSWL*RRSFSS
Trigger: GCTAGAGAATGATCTTCTGCAAAGCCATGAACTCAT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTAGATCTCAGACTCTaGTCCTCATTTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVLDLRL*SSFGSL
Trigger: TAAAGAGCCAAATGAGGAGCAGAGTCTGAGATCTAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATTAATTCGAGAGTACTaGCGCTTCAGTGCATTGATA +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVLIREY*RFSALI
Trigger: TATCAATGCACTGAAGCGGCAGTACTCTCGAATTAA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCCAGCCCATTGGTCTTaGTGGCCTCGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNPAHWS*WPRSAH
Trigger: ATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGTAAGGCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCCAGCCCATTGGTCTTaGTGGCCTCGTTCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GKAPHGAVEFICCFTTFYPAHWS*WPRSAH
Trigger: ATGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGG...ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGCCTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKRGECL*CPQPIG
Trigger: ACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCT...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTCGTCCTCCTGGTACTaGCTTCAGGGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCSSSWY*LQGCCL
Trigger: AAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCAACTTCGCCTGAACTaGAGACACATCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTQLRLN*RHIHIS
Trigger: GCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVFVFFG*TRRLWA
Trigger: TGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACACTGTGTGGTGGGGGATaGAGGCCAGGCTCCGCATGG +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTLCGGG*RPGSAW
Trigger: CCATGCGGAGCCTGGCCTGCATCCCCCACCACACAG...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAACTTGGTACAATGCATaGATGTTATTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQTWYNA*MLLVHR
Trigger: TCTGTGTACCAATAACATGCATGCATTGTACCAAGT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCAGCGAGTCTGCAAATaGTGGGCAGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKQRVCK*WAGHRP
Trigger: TGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAATCAAGTGACACTTTaGAGGTCATTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSNQVTL*RSFGLT
Trigger: GGTGAGACCAAATGACCTGCAAAGTGTCACTTGATT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACGAGACGGGAGAATGCTaGTCACTGGCCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNETGEC*SLALCL
Trigger: CAGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTC...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGAGACGGGAGAATGCTaGTCACTGGCCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVETGEC*SLALCL
Trigger: CAGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSMTLGP*HVLFVD
Trigger: GTCCACAAAAAGAACATGCCAAGGACCAAGAGTCAT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGCCCATTGGTCTTGCTaGCCTCGTTCTGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGAHWSC*PRSAHL
Trigger: TAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATAGCTTTCTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: EDSHIHRQCPEIIDEIAFSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...GAAAGCTATTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATCGAGTCTGCAAATGCTaGGCAGGTCACAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYRVCKC*AGHRPP
Trigger: GGGTGGCCTGTGACCTGCCCAGCATTTGCAGACTCG...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCAGACAGCAAAGAAAGTaGCTCAGAAACGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSRQQRK*LRNDVK
Trigger: CTTTACATCGTTTCTGAGCCACTTTCTTTGCTGTCT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCCTAAAACACTTCTGTTaGCACTTCCACACTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSLKHFC*HFHTRS
Trigger: ACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAG...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCATTCAGGTGAGCACTaGCTGCCTTTGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTHSGEH*LPLWKN
Trigger: GTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCAGAGTATCCAGGTGCTaGGATAATTCCGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: APHGAVEFICCFTTFYLLRVSRC*DNSGSF
Trigger: GAAGCTGCCGGAATTATCTCAGCACCTGGATACTCT...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGACCAGGGATGTGGATaGCAGCATTCTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVDQGCG*QHSWQL
Trigger: GAGCTGCCAAGAATGCTGTCATCCACATCCCTGGTC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAATCCCCACAGCCCGGATaGCTCTTGGTCCTTGGCATG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKESPQPG*LLVLGM
Trigger: CATGCCAAGGACCAAGAGTCATCCGGGCTGTGGGGA...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACACCGCCGGGTTTGCTaGAGCTCCTACTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQHRRVC*SSYSFE
Trigger: CTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGAGCTGGTGGGTGAGTaGGCTGTGTGGTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKELVGE*AVWWGM
Trigger: CATCCCCCACCACACAGCTCACTCACCCACCAGCTC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGACAAACATGAAGGCTaGGTCTATTCCTCTAATGAT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSDKHEG*VYSSND
Trigger: ATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCATTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: FELLPWGALLVALFSSGAFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 4 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAACAACAACAACTCTTaGAGCCCCTGGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLNNNNS*SPWGTG
Trigger: ACCTGTGCCCCAGGGGCTTCAAGAGTTGTTGTTGTT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACCGGTCAGCTTGTCCTaGCGCATCCGAGAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIPVSLS*RIRERP
Trigger: GGGGCGCTCTCGGATGCGGCAGGACAAGCTGACCGG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTCACAACATTCTATCTaGTCTCCTAATTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSSQHSI*SPNFAQ
Trigger: CTGGGCAAAATTAGGAGAGCAGATAGAATGTTGTGA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTTAGATCTCAGACTCTaGTCCTCATTTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLDLRL*SSFGSL
Trigger: TAAAGAGCCAAATGAGGAGCAGAGTCTGAGATCTAA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTCCTGAGACGGGAGAATaGTGGTCACTGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCPETGE*WSLALC
Trigger: ACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGG...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATCGTCCTCCTGGTACTaGCTTCAGGGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQSSSWY*LQGCCL
Trigger: AAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGGGTTTTTGAGTTGCTaGCTTGGGGAGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVGFLSC*LGELCW
Trigger: CCAGCAAAGCTCCCCAAGGCAGCAACTCAAAAACCC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCCACAATATTTATTTTaGCACAAGAATCCACTTCGT +
Preference number: 4 (lower is better)
Translates to: RGAIPDPLGERELERAGVPQYLF*HKNPLR
Trigger: ACGAAGTGGATTCTTGTGGCAAAATAAATATTGTGG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGAGGCCTTGTGCGTCTaGAGTCTAGAGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQEALCV*SLELVG
Trigger: ACCCACCAGCTCTAGACTGCAGACGCACAAGGCCTC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACCTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LSLLATVRTTACAVKVLDLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGCCCTGAGGGTGGTATaGAAAATAAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGALRVV*KISPSL
Trigger: GAGAGATGGGCTTATTTTGCATACCACCCTCAGGGC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGTTCTCTAGCATCTCCTaGGTAAGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKFSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTTACCCAGGAGATGCTAGAGAA...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGAGAATGCTGGTCACTaGCCCTTTGTCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVENAGH*PFVCPD
Trigger: ATCAGGGCAGACAAAGGGCCAGTGACCAGCATTCTC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGAGACGGGAGAATGCTaGTCACTGGCCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCETGEC*SLALCL
Trigger: CAGACAAAGGGCCAGTGACCAGCATTCTCCCGTCTC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAGCCCGGATGACTCTTaGTCCTTGGCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTSPDDS*SLACSF
Trigger: AAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGCCCATTGGTCTTGCTaGCCTCGTTCTGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLAHWSC*PRSAHL
Trigger: TAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCCTTGGGGAGCTTTGCTaGTGGCTTTGTTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGLGELC*WLCFLR
Trigger: CCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAG...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCAGGAAAGTGCACAGTTaGGGTTCTTTCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: APHGAVEFICCFTTFYLLRKVHS*GSFCRA
Trigger: GGCCCTACAGAAAGAACCCCAACTGTGCACTTTCCT...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGGAAAGTGCACAGTTaGGGTTCTTTCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRKVHS*GSFCRA
Trigger: GGCCCTACAGAAAGAACCCCAACTGTGCACTTTCCT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTCAGGAAAAGCTCAGTaGCGCGAGCAAGCTGTCCGG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYSGKAQ*REQAVR
Trigger: CCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCTGGTTATGTGAATTCTaGCATGAACACATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: RARKGRSERELESTGAFSWLCEF*HEHIRE
Trigger: TTCCCTAATGTGTTCATGCCAGAATTCACATAACCA...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTGAGCTGCCTGATGTaGATAACAGATAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLSCLM*ITDNSH
Trigger: GTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCATCCATCACTGTATCCTaGTGGCTCTATGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: FELLPWGALLVALFSSGASITVS*WLYDCR
Trigger: TCTACAGTCATAGAGCCACCAGGATACAGTGATGGA...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLHWLPL*KNHSNS
Trigger: ACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGTTCAGCATTGGGAGATaGCCAGCAGGGAACGGCATG +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKFSIGR*PAGNGM
Trigger: CATGCCGTTCCCTGCTGGCCATCTCCCAATGCTGAA...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACCATGTTCTCTTCTGTaGCACAGCCTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKPCSLL*HSLQAG
Trigger: GCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSKMAQE*ISTWYQ
Trigger: TTGATACCAAGTTGAAATTCACTCTTGAGCCATCTT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCATGCCCGGAGATTATTaGCGAAATAGCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTMPGDY*RNSFRE
Trigger: TTCCCGAAAGCTATTTCGTCAATAATCTCCGGGCAT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCACTTCGACAGGAATTaGTTGCTCCTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHHFDRN*LLLDSA
Trigger: AGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGCCGCTTCAGTGCATTaGTATCTGTGGTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHAASVH*YLWSCV
Trigger: AACGCATGACCACAGATATCAATGCACTGAAGCGGC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGCCGCTTCAGTGCATTaGTATCTGTGGTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVAASVH*YLWSCV
Trigger: AACGCATGACCACAGATATCAATGCACTGAAGCGGC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGKLLLI*GKCTVG
Trigger: CCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATCACCGCCGGGTTTGCTaGAGCTCCTACTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYHRRVC*SSYSFE
Trigger: CTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTG...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CATGGTTTTGTCCCAGTCAATGGCTATACTGTGCAAATAATGATCTGCCAAGGTCGAGGAGAAGGGGATTaGGGAGTGAGCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: HGFVPVNGYTVQIMICQGRGEGD*GVSLLF
Trigger: GAACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCG...ACCTTGGCAGATCATTATTTGCACAGTATAGCCATTGACTGGGACAAAACCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGGCATCAGAATGAGTTaGTTCCCGGCAAAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHGIRMS*FPAKGL
Trigger: TAGCCCTTTTGCCGGGAATCAACTCATTCTGATGCC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGAACGGCATGAAAGCTaGCCCAATACCTACAGTACC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLERHES*PNTYST
Trigger: GGTACTGTAGGTATTGGGTCAGCTTTCATGCCGTTC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGAACGGCATGAAAGCTaGCCCAATACCTACAGTACC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHERHES*PNTYST
Trigger: GGTACTGTAGGTATTGGGTCAGCTTTCATGCCGTTC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACAGCAGGGAACGGCATaGAAGCTGACCCAATACCTA +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQQQGTA*KLTQYL
Trigger: TAGGTATTGGGTCAGCTTTCATGCCGTTCCCTGCTG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTCCTTTCTCCATTGTGTaGGGACACAGTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLPFSIV*GHSEKV
Trigger: TACCTTCTCACTGTGTCCTCACACAATGGAGAAAGG...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCCTTTCTCCATTGTGTaGGGACACAGTGAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRPFSIV*GHSEKV
Trigger: TACCTTCTCACTGTGTCCTCACACAATGGAGAAAGG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATCAACGTGATGGTATTTaGAGGCGGGGCCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYQRDGI*RRGHWE
Trigger: CTCCCAATGGCCCCGCCTTCAAATACCATCACGTTG...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAACAACAACAACTCTTaGAGCCCCTGGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQNNNNS*SPWGTG
Trigger: ACCTGTGCCCCAGGGGCTTCAAGAGTTGTTGTTGTT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTGAGCATACTGTTCTaGCATGTTCTCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLSILF*HVLFCD
Trigger: GTCACAGAAGAGAACATGGCAGAACAGTATGCTCAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCCAAGACACCCCACTGCATTAACGACAGCATCCTCATCGTCTGGGTCATTCTCTCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: SKTPHCINDSILIVWVILSWTQL*NVIRSQ
Trigger: CTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGA...GAGAATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp GAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATAGCTTTCGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: EDSHIHRQCPEIIDEIAFELSFS*SIPLVQ
Trigger: CTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTC...GAAAGCTATTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQFVFFG*TRRLWA
Trigger: TGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTTTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 4 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACTGGAAGGTTTGGGGGTaGTGTCACAGGGACTCTGAA +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANWKVWG*CHRDSE
Trigger: TTCAGAGTCCCTGTGACAGCACCCCCAAACCTTCCA...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TCCAAGACACCCCACTGCATTAACGACAGCATCCTCATCGTCTGGGTCATTCTCGCTGGTTTTGTAAAATaGCATCAAGGGACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SKTPHCINDSILIVWVILAGFVK*HQGTLY
Trigger: GTACAGAGTCCCTTGATGGCATTTTACAAAACCAGC...GAGAATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAACCACTCCAACAGTTCTaGCTTCAGCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQPLQQF*LQPLSS
Trigger: GCTGGACAGTGGCTGAAGGCAGAACTGTTGGAGTGG...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTTCTCTAGCATCTCCTaGGTAAGGCGCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYFSSIS*VRRPMV
Trigger: CACCATGGGGCGCCTTACCCAGGAGATGCTAGAGAA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCGGGTTTAACTGTGGCTaGGAACGGTGTAATGTTGTA +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTGFNCG*ERCNVV
Trigger: TACAACATTACACCGTTCCCAGCCACAGTTAAACCC...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGTGCCGCTGGCAGGGTaGGTGCACCCTGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFVPLAG*VHPELS
Trigger: ACTGAGCTCAGGGTGCACCCACCCTGCCAGCGGCAC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTTGGGGAGCTTTGCTaGTGGCTTTGTTTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLGELC*WLCFLR
Trigger: CCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACACAGGTGCTGTGTTCTaGCTTCTGAGCAGAGGCCTT +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANTGAVF*LLSRGL
Trigger: AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCCATTCAGGTGAGCACTaGCTGCCTTTGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLHSGEH*LPLWKN
Trigger: GTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATG...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTCAGAAACCACTGCATCGTGAAGACATTTGTAAGTGGGGGCTCATATCCACCTAGCCACCTCAGTCTATaGTACTTTGTTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRNHCIVKTFVSGGSYPPSHLSL*YFVTAA
Trigger: GGCTGCTGTAACAAAGTACCATAGACTGAGGTGGCT...AGGTGGATATGAGCCCCCACTTACAAATGTCTTCACGATGCAGTGGTTTCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTGCGGTGAAGGTCCTTaGCTATCTGAATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCCGEGP*LSEFPW
Trigger: CCATGGGAATTCAGATAGTCAAGGACCTTCACCGCA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCATCTTTAAAACGGTCTaGTTAGGGAGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: APHGAVEFICCFTTFYLLIFKTV*LGRHVA
Trigger: TGCCACATGCCTCCCTAATCAGACCGTTTTAAAGAT...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCACTTCGACAGGAATTaGTTGCTCCTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANHFDRN*LLLDSA
Trigger: AGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACATTTTCCCTCCTGTGTaGCCAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANIFPPV*PGMWMT
Trigger: TGTCATCCACATCCCTGGTCACACAGGAGGGAAAAT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNKLLLI*GKCTVG
Trigger: CCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCACCCTTATACTACTGTaGAAAGGTGAGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTTLILL*KGESRY
Trigger: GTATCTGGACTCACCTTTTCACAGTAGTATAAGGGT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGCAGAGGCATCAGAATaGGTTGATTCCCGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVAEASE*VDSRQK
Trigger: CTTTTGCCGGGAATCAACTCATTCTGATGCCTCTGC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAATGGACATATTTCCTaGCCCTTCAACTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTNGHIS*PFNSTS
Trigger: AGAAGTGGAGTTGAAGGGTCAGGAAATATGTCCATT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGTAATTAGGTTTAGATaGCACCAGGAGGATGGGACC +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVVIRFR*HQEDGT
Trigger: GGTCCCATCCTCCTGGTGTCATCTAAACCTAATTAC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAAACAACAACAACTCTTaGAGCCCCTGGGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQNNNNS*SPWGTG
Trigger: ACCTGTGCCCCAGGGGCTTCAAGAGTTGTTGTTGTT...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATTTTCCGCCACTGCCTaGTGCCTCCCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSFSATA*CLPPGC
Trigger: GCAGCCTGGAGGGAGGCATCAGGCAGTGGCGGAAAA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTCTGTGACACAGCCTaGAAGCAGGCAGTCACAATA +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHFCDTA*KQAVTI
Trigger: TATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATCCAAGACACCCCACTaGATTAACGACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVSKTPH*INDSIL
Trigger: GAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACCTGAGACGGGAGAATaGTGGTCACTGGCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEPETGE*WSLALC
Trigger: ACAAAGGGCCAGTGACCAGCATTCTCCCGTCTCAGG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTGCTGGCCTCGTTCTaGTCATCTATCAGCCCTACG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQLLASF*SSISPT
Trigger: CGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATCGTCCTCCTGGTACTaGCTTCAGGGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSSSWY*LQGCCL
Trigger: AAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCAACTTCGCCTGAACTaGAGACACATCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANQLRLN*RHIHIS
Trigger: GCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGAGCTCAGTTTCAGCTaGAGCATCCCTCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQELSFS*SIPLVQ
Trigger: CTGAACCAGAGGGATGCTGCAGCTGAAACTGAGCTC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAATTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEFVFFG*TRRLWA
Trigger: TGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAA...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGGGTTTTTGAGTTGCTaGCTTGGGGAGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQGFLSC*LGELCW
Trigger: CCAGCAAAGCTCCCCAAGGCAGCAACTCAAAAACCC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNLRVPI*IVETRG
Trigger: ACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHLRVPI*IVETRG
Trigger: ACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACCACTCCAACAGTTCTaGCTTCAGCCACTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEPLQQF*LQPLSS
Trigger: GCTGGACAGTGGCTGAAGGCAGAACTGTTGGAGTGG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGATGCCGAAGTAACTTaGCCGACTGGATGCCAATTC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVDAEVT*PTGCQF
Trigger: GAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGAAGACATTTGTAAGTaGGGGCTCATATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHEDICK*GLISTS
Trigger: GGAGGTGGATATGAGCCCCCACTTACAAATGTCTTC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACAACTCTGCCAATTGTaGGAAAGGGAACGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQQLCQL*ERERSH
Trigger: ATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGGGTTTAACTGTGGCTaGGAACGGTGTAATGTTGTA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGGFNCG*ERCNVV
Trigger: TACAACATTACACCGTTCCCAGCCACAGTTAAACCC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGGAATTGATTGCTCCTaGACTCAGCTCTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGGIDCS*TQLCNV
Trigger: AACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTMTLGP*HVLFVD
Trigger: GTCCACAAAAAGAACATGCCAAGGACCAAGAGTCAT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGCCCATTGGTCTTGCTaGCCTCGTTCTGCTCATCTA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQAHWSC*PRSAHL
Trigger: TAGATGAGCAGAACGAGGCCAGCAAGACCAATGGGC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGTTGATACTAAGTTTGTaGACAGCAATGGTACAATCC +
Preference number: 4 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWLILSL*TAMVQS
Trigger: GGATTGTACCATTGCTGTCCACAAACTTAGTATCAA...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCHWLPL*KNHSNS
Trigger: ACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTG...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAATGACACCAGGAGGATaGGACCCTCATGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQMTPGG*DPHDEV
Trigger: AACCTCATCATGAGGGTCCCATCCTCCTGGTGTCAT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp ATGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTaGCAGGTCATTTGGTCTCACCAGAGCAAACGACCA +
Preference number: 4 (lower is better)
Translates to: MEGMERMESSDT*QVIWSHQSKRP
Trigger: TGGTCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATAGGTCCTTGACTATCTaGATTCCCATGGAGTCATCA +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHRSLTI*IPMESS
Trigger: TGATGACTCCATGGGAATTCAGATAGTCAAGGACCT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCATGCCCGGAGATTATTaGCGAAATAGCTTTCGGGAA +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLMPGDY*RNSFRE
Trigger: TTCCCGAAAGCTATTTCGTCAATAATCTCCGGGCAT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCTTCTTAAAAGGTCTCTaGAGACAGCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: APHGAVEFICCFTTFYLLFLKGL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGACCTTTTAAGAA...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATAGAGTATCCAGGTGCTaGGATAATTCCGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYRVSRC*DNSGSF
Trigger: GAAGCTGCCGGAATTATCTCAGCACCTGGATACTCT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCATCTTTAAAACGGTCTaGTTAGGGAGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLIFKTV*LGRHVA
Trigger: TGCCACATGCCTCCCTAATCAGACCGTTTTAAAGAT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATCACTTCGACAGGAATTaGTTGCTCCTGGACTCAGCT +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYHFDRN*LLLDSA
Trigger: AGCTGAGTCCAGGAGCAATCAATTCCTGTCGAAGTG...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGCTCCCAACTTCGCCTaGACTGCAGACACATCCACA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTAPNFA*TADTST
Trigger: TGTGGATGTGTCTGCAGTTCAGGCGAAGTTGGGAGC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGATCAAAGCTCTCCTTaGGAGGCGAACACAAACCTC +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQDQSSP*EANTNL
Trigger: GAGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATAACCCTGGAAATAGGTaGGAGGAGAGTGTTCACAGG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYNPGNR*EESVHR
Trigger: CCTGTGAACACTCTCCTCTCACCTATTTCCAGGGTT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATTTTGTAAGAGGAACTaGGGTGCAGAGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: RSLKTAISTDNARRLLTKFCKRN*GAEASE
Trigger: TTCTGATGCCTCTGCACCTCAGTTCCTCTTACAAAA...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTTTGTAAGAGGAACTaGGGTGCAGAGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHFCKRN*GAEASE
Trigger: TTCTGATGCCTCTGCACCTCAGTTCCTCTTACAAAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCTTTCCATCCTGGGGATaGATCATAATTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTFPSWG*IIIHPN
Trigger: GTTTGGATGAATTATGATTCATCCCCAGGATGGAAA...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACTTTGTTACAGCAGCCTaGACTGAGTCAGACATTCAG +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNFVTAA*TESDIQ
Trigger: CTGAATGTCTGACTCAGTTCAGGCTGCTGTAACAAA...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACACTTGGCCGACTGGATaGCAATTCTGTACTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNTWPTG*QFCTLA
Trigger: AGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTCCAAGACACCCCACTaGATTAACGACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYSKTPH*INDSIL
Trigger: GAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATCCAAGACACCCCACTaGATTAACGACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQSKTPH*INDSIL
Trigger: GAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGGGGAATGCCTCTGCTaGCCCCAGCCCATTGGTCTT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFGECLC*PQPIGL
Trigger: AAGACCAATGGGCTGGGGGCAGCAGAGGCATTCCCC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAAGAGGGGAATGCCTCTaGTGCCCCCAGCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIRGECL*CPQPIG
Trigger: ACCAATGGGCTGGGGGCAGCAGAGGCATTCCCCTCT...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATGCCTTCAGGGCTGCTaGCTTCTCTCCCAGCTGTCG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSCLQGC*LLSQLS
Trigger: CGACAGCTGGGAGAGAAGGCAGCAGCCCTGAAGGCA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGCCCTGAGGGTGGTATaGAAAATAAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYALRVV*KISPSL
Trigger: GAGAGATGGGCTTATTTTGCATACCACCCTCAGGGC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCACAGTGTTCCATGCTTaGACTCAGAAAATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGTVFHA*TQKMAE
Trigger: TTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCACAACAGTGTTCCATaGTTGCACTCAGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNHNSVP*LHSENG
Trigger: GCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACTTCATCACTGTCTCTaGCCTTACTATGTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQLHHCL*PYYVVQ
Trigger: CTGGACGACATAGTAAGGCCAGAGACAGTGATGAAG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCCGGATGACTCTTaGTCCTTGGCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCSPDDS*SLACSF
Trigger: AAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACAGCCCGGATGACTCTTaGTCCTTGGCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANSPDDS*SLACSF
Trigger: AAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCCTCGATCGTCCTCCTaGTACTGCCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGPRSSS*YCLQGC
Trigger: GCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACCTCGATCGTCCTCCTaGTACTGCCTTCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIPRSSS*YCLQGC
Trigger: GCAGCCCTGAAGGCAGTACCAGGAGGACGATCGAGG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGCTGCAGCATCCCTCTaGTTCAGTTCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVAAASL*FSSRAP
Trigger: GGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGCTGCAGCATCCCTCTaGTTCAGTTCCAGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIAAASL*FSSRAP
Trigger: GGGAGCCCTGGAACTGAACCAGAGGGATGCTGCAGC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGTAAGGCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: GKAPHGAVEFICCFTTFYQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGCCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCCCAGAACAGAAGGATaGACGAGAGTTAACAATCTA +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRPRTEG*TRVNNL
Trigger: TAGATTGTTAACTCTCGTCCATCCTTCTGTTCTGGG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCCCCAGAACAGAAGGATaGACGAGAGTTAACAATCTA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGPRTEG*TRVNNL
Trigger: TAGATTGTTAACTCTCGTCCATCCTTCTGTTCTGGG...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAGGCCAGGCTCCGCATaGAGCCCATCAAGTCATCCG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVRPGSA*SPSSHP
Trigger: CGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATGTTTGTGGACAGCAATaGTACAATCCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHVCGQQ*YNPKDL
Trigger: CAAGTCCTTGGGATTGTACCATTGCTGTCCACAAAC...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGTTTGTGGACAGCAATaGTACAATCCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVVCGQQ*YNPKDL
Trigger: CAAGTCCTTGGGATTGTACCATTGCTGTCCACAAAC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACTGAGCTGCCTGATGTaGATAACAGATAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQLSCLM*ITDNSH
Trigger: GTGGGAGTTATCTGTTATCCACATCAGGCAGCTCAG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATTCAGCATTGGGAGATaGCCAGCAGGGAACGGCATG +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTFSIGR*PAGNGM
Trigger: CATGCCGTTCCCTGCTGGCCATCTCCCAATGCTGAA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATCAGACATTCAGCATTaGGAGATGGCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKSDIQH*EMASRE
Trigger: TTCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATGGTTTTGTCCCAGTCAATGGCTATACTGTGCAAATAATGATCTGCCAAGGTATGACACCAGGAGGATaGGACCCTCATGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: HGFVPVNGYTVQIMICQGMTPGG*DPHDEV
Trigger: AACCTCATCATGAGGGTCCCATCCTCCTGGTGTCAT...ACCTTGGCAGATCATTATTTGCACAGTATAGCCATTGACTGGGACAAAACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGAGTATCCAGGTGCTaGGATAATTCCGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKERVSRC*DNSGSF
Trigger: GAAGCTGCCGGAATTATCTCAGCACCTGGATACTCT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAATCTTTAAAACGGTCTaGTTAGGGAGGCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVIFKTV*LGRHVA
Trigger: TGCCACATGCCTCCCTAATCAGACCGTTTTAAAGAT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGCGACACCCTTAGGATaGTTTCTGAACCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCATPLG*FLNLQR
Trigger: TCTTTGAAGGTTCAGAAATCATCCTAAGGGTGTCGC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGCGACACCCTTAGGATaGTTTCTGAACCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQATPLG*FLNLQR
Trigger: TCTTTGAAGGTTCAGAAATCATCCTAAGGGTGTCGC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACACCCTTATACTACTGTaGAAAGGTGAGTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNTLILL*KGESRY
Trigger: GTATCTGGACTCACCTTTTCACAGTAGTATAAGGGT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACTGTCACAGGGACTCTaGAGGCCCCCAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVLSQGL*RPPEQK
Trigger: CTTCTGTTCTGGGGGCCTTCAGAGTCCCTGTGACAG...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTGGTATGTGCATGCTTaGGTATTAGTAACACCCAGA +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHWYVHA*VLVTPR
Trigger: TCTGGGTGTTACTAATACTCAAGCATGCACATACCA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKESHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTACTGTGTTCTGGCTTCTaGGCAGAGGCCTTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVLCSGF*AEALCV
Trigger: GACGCACAAGGCCTCTGCTCAGAAGCCAGAACACAG...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAATTCCAGAGACAAACATaGAGGCTGAGTCTATTCCTC +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQFQRQT*RLSLFL
Trigger: GAGGAATAGACTCAGCCTTCATGTTTGTCTCTGGAA...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAAATGGACATATTTCCTaGCCCTTCAACTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVNGHIS*PFNSTS
Trigger: AGAAGTGGAGTTGAAGGGTCAGGAAATATGTCCATT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGTAAGGCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATAATGGACATATTTCCTaGCCCTTCAACTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: GKAPHGAVEFICCFTTFYNGHIS*PFNSTS
Trigger: AGAAGTGGAGTTGAAGGGTCAGGAAATATGTCCATT...ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGCCTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACCAGCCTCCAGAACTGTaGGAAAGAAATGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANQPPEL*ERNVCV
Trigger: AACACAGACATTTCTTTCTCACAGTTCTGGAGGCTG...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAAGACACGTTGATCTTTaGCTTCTCAGCCTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKRHVDL*LLSLQN
Trigger: GTTCTGGAGGCTGAGAAGTCAAAGATCAACGTGTCT...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGAGAATGGAATCAAGTaGCACTTTGCAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVENGIK*HFAGHL
Trigger: CAAATGACCTGCAAAGTGTCACTTGATTCCATTCTC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCTTCCTCTGCACTTTATaGAGAAGCCTATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLFLCTL*RSLSFC
Trigger: GCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAA...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTCTGTGACACAGCCTaGAAGCAGGCAGTCACAATA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQFCDTA*KQAVTI
Trigger: TATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACTGAGCATACTGTTCTaGCATGTTCTCTTCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVLSILF*HVLFCD
Trigger: GTCACAGAAGAGAACATGGCAGAACAGTATGCTCAG...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTT +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLVQIMI*QGQPNL
Trigger: AAGGTTTGGTTGACCTTGGCAGATCATTATTTGCAC...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATCGTCCTCCTGGTACTaGCTTCAGGGCTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVSSSWY*LQGCCL
Trigger: AAGGCAGCAGCCCTGAAGGCAGTACCAGGAGGACGA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGCCCTGAGGGTGGTATaGAAAATAAGCCCATCTCTC +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEALRVV*KISPSL
Trigger: GAGAGATGGGCTTATTTTGCATACCACCCTCAGGGC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCAGCGAGTCTGCAAATaGTGGGCAGGTCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFQRVCK*WAGHRP
Trigger: TGGCCTGTGACCTGCCCAGCATTTGCAGACTCGCTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACAAAAAGGAAAGAGACTaGTGCCTCTTCCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNKKERD*CLFQDV
Trigger: TACATCCTGGAAGAGGCAGCAGTCTCTTTCCTTTTT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGAAGACATTTGTAAGTaGGGGCTCATATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYEDICK*GLISTS
Trigger: GGAGGTGGATATGAGCCCCCACTTACAAATGTCTTC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGGAATTGATTGCTCCTaGACTCAGCTCTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCGIDCS*TQLCNV
Trigger: AACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGGGAATTGATTGCTCCTaGACTCAGCTCTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKGIDCS*TQLCNV
Trigger: AACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCC...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATTTGAGTTGCTGCCTTaGGGAGCTTTGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKFELLP*GALLVA
Trigger: AGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCCCAGAACAGAAGGATaGACGAGAGTTAACAATCTA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNPRTEG*TRVNNL
Trigger: TAGATTGTTAACTCTCGTCCATCCTTCTGTTCTGGG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGGAGCTAGAAAGCACTaGGGCCTTCTCCAGAGAAAG +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKGARKH*GLLQRK
Trigger: CTTTCTCTGGAGAAGGCCCCAGTGCTTTCTAGCTCC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 4 (lower is better)
Translates to: KSSVPLRIKALLERRTQTTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAATGCAGTGGGTCTCTaGGCCCTGAGGGTGGTATGC +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGNAVGL*ALRVVC
Trigger: GCATACCACCCTCAGGGCCCAGAGACCCACTGCATT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGTTTGTGGACAGCAATaGTACAATCCCAAGGACTTG +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVVCGQQ*YNPKDL
Trigger: CAAGTCCTTGGGATTGTACCATTGCTGTCCACAAAC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTATAGCAAGTCCATACTaGTCTTTGTACATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLIASPY*SLYMLC
Trigger: ACACAGCATGTACAAAGACCAGTATGGACTTGCTAT...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATATCACTGTATCCTGGTaGCTCTATGACTGTAGACTT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHITVSW*LYDCRL
Trigger: AAGTCTACAGTCATAGAGCCACCAGGATACAGTGAT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAATCCCAAGGACTTGTA +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILS*WTAMVQSQGLV
Trigger: TACAAGTCCTTGGGATTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 72 bp CAATACATAGGGAAGATAGCAAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGAGGCTACTGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: QYIGKIASPYWS*YMLCGRGYCRF
Trigger: AAACCTGCAGTAGCCTCTACCACACAGCATGTACAAAGACCAGTATGGACTTGCTATCTTCCCTATGTATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 72 bp ACAATGTCCCAAACAGCTGCAGTCCACAGGCTGACATaGCTAACTAGATTTAGATCATCTGGAGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: TMSQTAAVHRLT*LTRFRSSGGFC
Trigger: ACAAAAGCCTCCAGATGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGACTGCAGCTGTTTGGGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACCATGTTCTCTTCTGTaGCACAGCCTGCAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSPCSLL*HSLQAG
Trigger: GCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAAGAGTATCCAGGTGCTaGGATAATTCCGGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKRVSRC*DNSGSF
Trigger: GAAGCTGCCGGAATTATCTCAGCACCTGGATACTCT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAAAATAAACAGTCTGCATaGGTTCATGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: RSLKTAISTDNARRLLTKNKQSA*VHGFAE
Trigger: TTCTGCAAAGCCATGAACTCATGCAGACTGTTTATT...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPGELFT*DGRMLV
Trigger: GACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGACCAGGGATGTGGATaGCAGCATTCTTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFDQGCG*QHSWQL
Trigger: GAGCTGCCAAGAATGCTGTCATCCACATCCCTGGTC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACATTTTCCCTCCTGTGTaGCCAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNIFPPV*PGMWMT
Trigger: TGTCATCCACATCCCTGGTCACACAGGAGGGAAAAT...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAATTTTCCCTCCTGTGTaGCCAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKIFPPV*PGMWMT
Trigger: TGTCATCCACATCCCTGGTCACACAGGAGGGAAAAT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAAGCTCCTACTCATTTaGGGAAAGTGCACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEKLLLI*GKCTVG
Trigger: CCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCACCGCCGGGTTTGCTaGAGCTCCTACTCATTTGAG +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFHRRVC*SSYSFE
Trigger: CTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGGACAAACATGAAGGCTaGGTCTATTCCTCTAATGAT +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLALLCRPETEVDKHEG*VYSSND
Trigger: ATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTC...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGCAAAGAAAAGGATATaGGGTGGAAACACTATTATC +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRAKKRI*GGNTII
Trigger: GATAATAGTGTTTCCACCTCATATCCTTTTCTTTGC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGCAGAGGCATCAGAATaGGTTGATTCCCGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKAEASE*VDSRQK
Trigger: CTTTTGCCGGGAATCAACTCATTCTGATGCCTCTGC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATTTTGTAAGAGGAACTaGGGTGCAGAGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKFCKRN*GAEASE
Trigger: TTCTGATGCCTCTGCACCTCAGTTCCTCTTACAAAA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTTCCATCCTGGGGATaGATCATAATTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHFPSWG*IIIHPN
Trigger: GTTTGGATGAATTATGATTCATCCCCAGGATGGAAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGAACGGCATGAAAGCTaGCCCAATACCTACAGTACC +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTERHES*PNTYST
Trigger: GGTACTGTAGGTATTGGGTCAGCTTTCATGCCGTTC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACAACGTGATGGTATTTaGAGGCGGGGCCATTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSQRDGI*RRGHWE
Trigger: CTCCCAATGGCCCCGCCTTCAAATACCATCACGTTG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTCATATCCACAGACAATaGCCGGAGATTATTGACGAA +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCHIHRQ*PEIIDE
Trigger: TTCGTCAATAATCTCCGGGCATTGTCTGTGGATATG...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATATGAGTTCATGGCTTTaGAGAAGATCATTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHMSSWL*RRSFSS
Trigger: GCTAGAGAATGATCTTCTGCAAAGCCATGAACTCAT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATCCAAGACACCCCACTaGATTAACGACAGCATCCTC +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSKTPH*INDSIL
Trigger: GAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACTCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNSTGID*SWTQLC
Trigger: GCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGA...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATCGACAGGAATTGATTaGTCCTGGACTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSTGID*SWTQLC
Trigger: GCAGAGCTGAGTCCAGGAGCAATCAATTCCTGTCGA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCCATACTGTTAAAAGCTaGATGGTATTCACTTCGACA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGHTVKS*MVFTST
Trigger: TGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACCAACTTCGCCTGAACTaGAGACACATCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNQLRLN*RHIHIS
Trigger: GCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTG...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACACAACTTCGCCTGAACTaGAGACACATCCACATCAGC +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTQLRLN*RHIHIS
Trigger: GCTGATGTGGATGTGTCTGCAGTTCAGGCGAAGTTG...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTTTGTTTTCTTCGGGTaGACTCGGCGGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFFVFFG*TRRLWA
Trigger: TGCCCAGAGCCGCCGAGTGCACCCGAAGAAAACAAA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGGGTTTTTGAGTTGCTaGCTTGGGGAGCTTTGCTGG +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPGFLSC*LGELCW
Trigger: CCAGCAAAGCTCCCCAAGGCAGCAACTCAAAAACCC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGCTGTCCGGAGCAACTaGGTAAAGCATATGCCAAGT +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTAVRSN*VKHMPS
Trigger: ACTTGGCATATGCTTTACGCAGTTGCTCCGGACAGC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGCTGGTTTTGTAAAATaGCATCAAGGGACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQAGFVK*HQGTLY
Trigger: GTACAGAGTCCCTTGATGGCATTTTACAAAACCAGC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAACATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 4 (lower is better)
Translates to: RSLKTAISTDNARRLLTKHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTGTGGTAGAGGCTACTaGAGGTTTCTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRCGRGY*RFLYFL
Trigger: TAGAAAATAAAGAAACCTGCAGTAGCCTCTACCACA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGACAGTGTTCCATGCTTaGACTCAGAAAATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKTVFHA*TQKMAE
Trigger: TTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGT...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGAACCAGCGAGTCTaGAAATGCTGGGCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRNQRV*KCWAGH
Trigger: GTGACCTGCCCAGCATTTGCAGACTCGCTGGTTCCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATAGCTTTCAAAAAGGAAAGAGACTaGTGCCTCTTCCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: EDSHIHRQCPEIIDEIAFKKERD*CLFQDV
Trigger: TACATCCTGGAAGAGGCAGCAGTCTCTTTCCTTTTT...GAAAGCTATTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAGTAACTTGGCCGACTaGATGCCAATTCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQSNLAD*MPILYF
Trigger: AAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGGTCTGCATGAGTTCATaGCTTTGCAGAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKVCMSS*LCRRSF
Trigger: GAATGATCTTCTGCAAAGCCATGAACTCATGCAGAC...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGTCTGCATGAGTTCATaGCTTTGCAGAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCVCMSS*LCRRSF
Trigger: GAATGATCTTCTGCAAAGCCATGAACTCATGCAGAC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGGAATTGATTGCTCCTaGACTCAGCTCTGCAATGTT +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYGIDCS*TQLCNV
Trigger: AACATTGCAGAGCTGAGTCCAGGAGCAATCAATTCC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGAGAATGCTGGTCACTaGCCCTTTGTCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPENAGH*PFVCPD
Trigger: ATCAGGGCAGACAAAGGGCCAGTGACCAGCATTCTC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVMTLGP*HVLFVD
Trigger: GTCCACAAAAAGAACATGCCAAGGACCAAGAGTCAT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAAGAGAGTTTTTATATaGGGAGATGGCAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRKRVFI*GDGSNY
Trigger: ATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAACTTTGCAGGTCATTTaGTCTCACCAGAGCAAACGA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQTLQVI*SHQSKR
Trigger: TCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGT...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp TACAGTTTCTGTCCTAGCAAGCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAGAGAACTGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: YSFCPSKLVCAC*SISNTQRTGRF
Trigger: AAACCTTCCAGTTCTCTGGGTGTTACTAATACTCAAGCATGCACATACCAGCTTGCTAGGACAGAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
3UTR CAA 72 bp AATGTTGTAGGTGTATTTTTCCCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGCCATGGAATAAACAGT +
Preference number: 4 (lower is better)
Translates to: NVVGVFFPQLCQ*WERERSHGINS
Trigger: ACTGTTTATTCCATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGGGAAAAATACACCTACAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTCTTAAAAGGTCTCTaGAGACAGCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQFLKGL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGACCTTTTAAGAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGGAGAACTGTTTACCTaGGACGGGAGAATGCTGGTC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFGELFT*DGRMLV
Trigger: GACCAGCATTCTCCCGTCTCAGGTAAACAGTTCTCC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGTCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLALLCRPETEVSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVFKSQE*GMGVMS
Trigger: ACTCATAACACCCATACCTCATTCCTGACTTTTAAA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATTTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHFKSQE*GMGVMS
Trigger: ACTCATAACACCCATACCTCATTCCTGACTTTTAAA...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACAGCAGGGAACGGCATaGAAGCTGACCCAATACCTA +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSQQGTA*KLTQYL
Trigger: TAGGTATTGGGTCAGCTTTCATGCCGTTCCCTGCTG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACAGCCTCCAGAACTGTaGGAAAGAAATGTCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEQPPEL*ERNVCV
Trigger: AACACAGACATTTCTTTCTCACAGTTCTGGAGGCTG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGTAATTAGGTTTAGATaGCACCAGGAGGATGGGACC +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNVIRFR*HQEDGT
Trigger: GGTCCCATCCTCCTGGTGTCATCTAAACCTAATTAC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTT +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVVQIMI*QGQPNL
Trigger: AAGGTTTGGTTGACCTTGGCAGATCATTATTTGCAC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTATGAGTTCATGGCTTTaGAGAAGATCATTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCMSSWL*RRSFSS
Trigger: GCTAGAGAATGATCTTCTGCAAAGCCATGAACTCAT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACTTAGATCTCAGACTCTaGTCCTCATTTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANLDLRL*SSFGSL
Trigger: TAAAGAGCCAAATGAGGAGCAGAGTCTGAGATCTAA...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATCCTGGACTCAGCTCTaGAATGTTATTAGATCTCAG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQSWTQL*NVIRSQ
Trigger: CTGAGATCTAATAACATTGCAGAGCTGAGTCCAGGA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCATACTGTTAAAAGCTaGATGGTATTCACTTCGACA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNHTVKS*MVFTST
Trigger: TGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAACTCAGAGTTCCCATCTaGATAGTGGAGACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKLRVPI*IVETRG
Trigger: ACCTCTTGTCTCCACTATGCAGATGGGAACTCTGAG...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACACTTGGTACAATGCATaGATGTTATTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNTWYNA*MLLVHR
Trigger: TCTGTGTACCAATAACATGCATGCATTGTACCAAGT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGGATTACTTGGTACAATaGATGCATGTTATTGGTACA +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRDYLVQ*MHVIGT
Trigger: TGTACCAATAACATGCATGCATTGTACCAAGTAATC...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGATTACTTGGTACAATaGATGCATGTTATTGGTACA +
Preference number: 4 (lower is better)
Translates to: SVPSGDRSFESGGILVNGDYLVQ*MHVIGT
Trigger: TGTACCAATAACATGCATGCATTGTACCAAGTAATC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCAGGTGAGCACTGGCTaGCTTTGTGGAAGAACCACT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFQVSTG*LCGRTT
Trigger: AGTGGTTCTTCCACAAAGGCAGCCAGTGCTCACCTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGTCTGCATGAGTTCATaGCTTTGCAGAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYVCMSS*LCRRSF
Trigger: GAATGATCTTCTGCAAAGCCATGAACTCATGCAGAC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACCTTCATCACTGTCTCTaGCCTTACTATGTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNLHHCL*PYYVVQ
Trigger: CTGGACGACATAGTAAGGCCAGAGACAGTGATGAAG...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGAGAATGCTGGTCACTaGCCCTTTGTCTGCCCTGAT +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSENAGH*PFVCPD
Trigger: ATCAGGGCAGACAAAGGGCCAGTGACCAGCATTCTC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTTTCCTAAAAGAAGGTaGTTTATAACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: NMKAESIPLMMARRRGLRFPKRR*FITGEL
Trigger: CAGTTCTCCAGTTATAAACCACCTTCTTTTAGGAAA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGGGGAGCTTTGCTGGTaGCTTTGTTTTCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSGELCW*LCFLRV
Trigger: CACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGGGGAGCTTTGCTGGTaGCTTTGTTTTCTTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVGELCW*LCFLRV
Trigger: CACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTTTGAGTTGCTGCCTTaGGGAGCTTTGCTGGTGGCT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFFELLP*GALLVA
Trigger: AGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTGAAACTGGTACTGTaGGAAATCTCACACGACACA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQLKLVL*EISHDT
Trigger: TGTGTCGTGTGAGATTTCCCACAGTACCAGTTTCAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTATTGATACTAAGTTTGTaGACAGCAATGGTACAATCC +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLILSL*TAMVQS
Trigger: GGATTGTACCATTGCTGTCCACAAACTTAGTATCAA...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCTTGCACTCAGAAAATaGCAGAACAGTTACAACAAT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHLALRK*QNSYNN
Trigger: ATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTTGCACTCAGAAAATaGCAGAACAGTTACAACAAT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLALRK*QNSYNN
Trigger: ATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATAAGAGAGTTTTTATATaGGGAGATGGCAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHKRVFI*GDGSNY
Trigger: ATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGCCACCTCAGTCTATaGTACTTTGTTACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSHLSL*YFVTAA
Trigger: GGCTGCTGTAACAAAGTACCATAGACTGAGGTGGCT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp TTCTTTTTAATTCGAGAGTACTGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGTTCCATCATCATACTG +
Preference number: 4 (lower is better)
Translates to: FFLIREYCRFSA*ISVVMRSIIIL
Trigger: CAGTATGATGATGGAACGCATGACCACAGATATCAATGCACTGAAGCGGCAGTACTCTCGAATTAAAAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATGCGGTGAAGGTCCTTaGCTATCTGAATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSCGEGP*LSEFPW
Trigger: CCATGGGAATTCAGATAGTCAAGGACCTTCACCGCA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATGCGGTGAAGGTCCTTaGCTATCTGAATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVCGEGP*LSEFPW
Trigger: CCATGGGAATTCAGATAGTCAAGGACCTTCACCGCA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGCCGCTTCAGTGCATTaGTATCTGTGGTCATGCGTT +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVAASVH*YLWSCV
Trigger: AACGCATGACCACAGATATCAATGCACTGAAGCGGC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAATTTTCCCTCCTGTGTaGCCAGGGATGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVIFPPV*PGMWMT
Trigger: TGTCATCCACATCCCTGGTCACACAGGAGGGAAAAT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGTCATCCGTACCACTaGGGATCAAAGCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFSHPYH*GSKLSL
Trigger: CAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGACCAATTCACATTGTaGTTACTTGGTACAATGCAT +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANDQFTL*LLGTMH
Trigger: ATGCATTGTACCAAGTAATCACAATGTGAATTGGTC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGGCATCAGAATGAGTTaGTTCCCGGCAAAAGGGCTA +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSGIRMS*FPAKGL
Trigger: TAGCCCTTTTGCCGGGAATCAACTCATTCTGATGCC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGCAGAGGCATCAGAATaGGTTGATTCCCGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSAEASE*VDSRQK
Trigger: CTTTTGCCGGGAATCAACTCATTCTGATGCCTCTGC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATTTTGTAAGAGGAACTaGGGTGCAGAGGCATCAGAA +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKFCKRN*GAEASE
Trigger: TTCTGATGCCTCTGCACCTCAGTTCCTCTTACAAAA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATTTCCATCCTGGGGATaGATCATAATTCATCCAAAC +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKFPSWG*IIIHPN
Trigger: GTTTGGATGAATTATGATTCATCCCCAGGATGGAAA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTCTTTCTGCTTCAGATaGCGAAGTAACTTGGCCGAC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPSFCFR*RSNLAD
Trigger: GTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTCACAACATTCTATCTaGTCTCCTAATTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYSQHSI*SPNFAQ
Trigger: CTGGGCAAAATTAGGAGAGCAGATAGAATGTTGTGA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATCACAACATTCTATCTaGTCTCCTAATTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQSQHSI*SPNFAQ
Trigger: CTGGGCAAAATTAGGAGAGCAGATAGAATGTTGTGA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAGCTGTAGAATTCATCTaGTGTTTCACAACATTCTAT +
Preference number: 4 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVAVEFI*CFTTFY
Trigger: ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGC...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCATTCTCTTCATCACTGTCTCTGGCCTTACTATGTCGTCCAGAAACTGAGGTGCCACAATATTTATTTTaGCACAAGAATCCACTTCGT +
Preference number: 4 (lower is better)
Translates to: SFSSSLSLALLCRPETEVPQYLF*HKNPLR
Trigger: ACGAAGTGGATTCTTGTGGCAAAATAAATATTGTGG...CACCTCAGTTTCTGGACGACATAGTAAGGCCAGAGACAGTGATGAAGAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR GCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCCACAATATTTATTTTaGCACAAGAATCCACTTCGT +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNPQYLF*HKNPLR
Trigger: ACGAAGTGGATTCTTGTGGCAAAATAAATATTGTGG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGCCAAGTGTGTCCTGTaGATAAGATCTTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVAKCVL*IRSSAG
Trigger: CCCAGCTGAAGATCTTATGCACAGGACACACTTGGC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACTCATAGTAAAAGCCTaGTCTACAGTTACAGTTTTC +
Preference number: 4 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQLIVKA*STVTVF
Trigger: GAAAACTGTAACTGTAGAGCAGGCTTTTACTATGAG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGGCTGTAGGCGTGGCTaGTTTTTAAGAAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIGCRRG*FLRSWM
Trigger: CATCCAGCTTCTTAAAAAGCAGCCACGCCTACAGCC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCAACTCTGCCAATTGTaGGAAAGGGAACGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFQLCQL*ERERSH
Trigger: ATGGCTCCGTTCCCTTTCCCACAATTGGCAGAGTTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGGGTTTAACTGTGGCTaGGAACGGTGTAATGTTGTA +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNGFNCG*ERCNVV
Trigger: TACAACATTACACCGTTCCCAGCCACAGTTAAACCC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAGGAAAGTGCACAGTTaGGGTTCTTTCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSRKVHS*GSFCRA
Trigger: GGCCCTACAGAAAGAACCCCAACTGTGCACTTTCCT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTACTTCACCTCTGTGTaGCTCAGAGTTCCCATCTGC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFYFTSV*LRVPIC
Trigger: GCAGATGGGAACTCTGAGCCACACAGAGGTGAAGTA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACACGAAGAAGATAAAATaGCTTTTCTCACGGTATAGG +
Preference number: 4 (lower is better)
Translates to: REWNQVTLCRSFGLTRANTKKIK*LFSRYR
Trigger: CCTATACCGTGAGAAAAGCCATTTTATCTTCTTCGT...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGATGCTAACTTCAGATaGCACAGAATTCAAGACCAA +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKDANFR*HRIQDQ
Trigger: TTGGTCTTGAATTCTGTGCCATCTGAAGTTAGCATC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTATTGATACTAAGTTTGTaGACAGCAATGGTACAATCC +
Preference number: 4 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVLILSL*TAMVQS
Trigger: GGATTGTACCATTGCTGTCCACAAACTTAGTATCAA...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACCACATTGTGATTACTTaGTACAATGCATGCATGTTA +
Preference number: 4 (lower is better)
Translates to: GCINNIPASIANRLPETNHIVIT*YNACML
Trigger: TAACATGCATGCATTGTACCAAGTAATCACAATGTG...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTGGTTATGTGAATTCTaGCATGAACACATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCWLCEF*HEHIRE
Trigger: TTCCCTAATGTGTTCATGCCAGAATTCACATAACCA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCACTGGCTGCCTTTGTaGAAGAACCACTCCAACAGT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGHWLPL*KNHSNS
Trigger: ACTGTTGGAGTGGTTCTTCCACAAAGGCAGCCAGTG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCATTCAGGTGAGCACTaGCTGCCTTTGTGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGHSGEH*LPLWKN
Trigger: GTTCTTCCACAAAGGCAGCCAGTGCTCACCTGAATG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATCAGACATTCAGCATTaGGAGATGGCCAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVSDIQH*EMASRE
Trigger: TTCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTATGACACCAGGAGGATaGGACCCTCATGATGAGGTT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGMTPGG*DPHDEV
Trigger: AACCTCATCATGAGGGTCCCATCCTCCTGGTGTCAT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAA +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYKMAQE*ISTWYQ
Trigger: TTGATACCAAGTTGAAATTCACTCTTGAGCCATCTT...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAGGGAGCTAGTGAGCTaGTTCAAGAGAGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVRELVS*FKRGKN
Trigger: GTTCTTTCCTCTCTTGAATCAGCTCACTAGCTCCCT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTTTAAAAGTCAGGAATaGGGTATGGGTGTTATGAGT +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYFKSQE*GMGVMS
Trigger: ACTCATAACACCCATACCTCATTCCTGACTTTTAAA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEVQIMI*QGQPNL
Trigger: AAGGTTTGGTTGACCTTGGCAGATCATTATTTGCAC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAATCACAACATTCTATCTaGTCTCCTAATTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKESQHSI*SPNFAQ
Trigger: CTGGGCAAAATTAGGAGAGCAGATAGAATGTTGTGA...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGGCTGTAGAATTCATCTaGTGTTTCACAACATTCTAT +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKAVEFI*CFTTFY
Trigger: ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGC...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAACATACTGTTAAAAGCTaGATGGTATTCACTTCGACA +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKHTVKS*MVFTST
Trigger: TGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGCTGGTTTTGTAAAATaGCATCAAGGGACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKAGFVK*HQGTLY
Trigger: GTACAGAGTCCCTTGATGGCATTTTACAAAACCAGC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGATTACTTGGTACAATaGATGCATGTTATTGGTACA +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCDYLVQ*MHVIGT
Trigger: TGTACCAATAACATGCATGCATTGTACCAAGTAATC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTGTGGTAGAGGCTACTaGAGGTTTCTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYCGRGY*RFLYFL
Trigger: TAGAAAATAAAGAAACCTGCAGTAGCCTCTACCACA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAAAAAGGAAAGAGACTaGTGCCTCTTCCAGGATGTA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTKKERD*CLFQDV
Trigger: TACATCCTGGAAGAGGCAGCAGTCTCTTTCCTTTTT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGGATGTTAAAGCCTTaGCAGTACCCAACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTRMLKP*QYPTVL
Trigger: CAAAACTGTTGGGTACTGCCAAGGCTTTAACATCCT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGAAGACATTTGTAAGTaGGGGCTCATATCCACCTCC +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGEDICK*GLISTS
Trigger: GGAGGTGGATATGAGCCCCCACTTACAAATGTCTTC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGTCTGCATGAGTTCATaGCTTTGCAGAAGATCATTC +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKVCMSS*LCRRSF
Trigger: GAATGATCTTCTGCAAAGCCATGAACTCATGCAGAC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACTTCATCACTGTCTCTaGCCTTACTATGTCGTCCAG +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALILHHCL*PYYVVQ
Trigger: CTGGACGACATAGTAAGGCCAGAGACAGTGATGAAG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGTTTCCTAAAAGAAGGTaGTTTATAACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKFPKRR*FITGEL
Trigger: CAGTTCTCCAGTTATAAACCACCTTCTTTTAGGAAA...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAGCCCGGATGACTCTTaGTCCTTGGCATGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVSPDDS*SLACSF
Trigger: AAAAGAACATGCCAAGGACCAAGAGTCATCCGGGCT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGGAGATAGAGCTTATTaGGCTGTTTCCCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPGDRAY*AVSLVH
Trigger: ATGAACCAGGGAAACAGCCCAATAAGCTCTATCTCC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTTTTATATGGGGAGATaGCAGCAACTATACATCTAT +
Preference number: 4 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCFYMGR*QQLYIY
Trigger: ATAGATGTATAGTTGCTGCCATCTCCCCATATAAAA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGACAGCAAAGAAAGTaGCTCAGAAACGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKERQQRK*LRNDVK
Trigger: CTTTACATCGTTTCTGAGCCACTTTCTTTGCTGTCT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATGGTTATGTGAATTCTaGCATGAACACATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQWLCEF*HEHIRE
Trigger: TTCCCTAATGTGTTCATGCCAGAATTCACATAACCA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACTAAAACACTTCTGTTaGCACTTCCACACTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKELKHFC*HFHTRS
Trigger: ACTTCTAGTGTGGAAGTGCCAACAGAAGTGTTTTAG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAGGTCCTTGACTATCTaGATTCCCATGGAGTCATCA +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSRSLTI*IPMESS
Trigger: TGATGACTCCATGGGAATTCAGATAGTCAAGGACCT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGTCCTTGACTATCTaGATTCCCATGGAGTCATCA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRSLTI*IPMESS
Trigger: TGATGACTCCATGGGAATTCAGATAGTCAAGGACCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGCGACACCCTTAGGATaGTTTCTGAACCTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIATPLG*FLNLQR
Trigger: TCTTTGAAGGTTCAGAAATCATCCTAAGGGTGTCGC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAATAAACAGTCTGCATaGGTTCATGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTNKQSA*VHGFAE
Trigger: TTCTGCAAAGCCATGAACTCATGCAGACTGTTTATT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCCCCTCCGTAAAGCATaGAAAGGAAAATCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFPLRKA*KGKSGS
Trigger: ACTTCCTGATTTTCCTTTTCATGCTTTACGGAGGGG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGCAAAGAAAAGGATATaGGGTGGAAACACTATTATC +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEAKKRI*GGNTII
Trigger: GATAATAGTGTTTCCACCTCATATCCTTTTCTTTGC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTTGTTACAGCAGCCTaGACTGAGTCAGACATTCAG +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFVTAA*TESDIQ
Trigger: CTGAATGTCTGACTCAGTTCAGGCTGCTGTAACAAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAAGAGTCAGAAACCACTaGATCGTGAAGACATTTGTA +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKRVRNH*IVKTFV
Trigger: TACAAATGTCTTCACGATGCAGTGGTTTCTGACTCT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATTAGATCTCAGACTCTaGTCCTCATTTGGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTLDLRL*SSFGSL
Trigger: TAAAGAGCCAAATGAGGAGCAGAGTCTGAGATCTAA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATTAATTCGAGAGTACTaGCGCTTCAGTGCATTGATA +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKLIREY*RFSALI
Trigger: TATCAATGCACTGAAGCGGCAGTACTCTCGAATTAA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAACTGGTCTTTGTACATaGTGTGTGGTAGAGGCTACT +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSTGLCT*CVVEAT
Trigger: AGTAGCCTCTACCACACAGCATGTACAAAGACCAGT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCACAACAGTGTTCCATaGTTGCACTCAGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFHNSVP*LHSENG
Trigger: GCCATTTTCTGAGTGCAAGCATGGAACACTGTTGTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAATCAAGTGACACTTTaGAGGTCATTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPNQVTL*RSFGLT
Trigger: GGTGAGACCAAATGACCTGCAAAGTGTCACTTGATT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTTTGTCCCAGTCAATaGCTATACTGTGCAAATAAT +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQFCPSQ*LYCANN
Trigger: ATTATTTGCACAGTATAGCCATTGACTGGGACAAAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTAGGATGTTAAAGCCTTaGCAGTACCCAACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPRMLKP*QYPTVL
Trigger: CAAAACTGTTGGGTACTGCCAAGGCTTTAACATCCT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAATTTCCTAAAAGAAGGTaGTTTATAACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQFPKRR*FITGEL
Trigger: CAGTTCTCCAGTTATAAACCACCTTCTTTTAGGAAA...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTATGACTCTTGGTCCTTaGCATGTTCTTTTTGTGGAC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPMTLGP*HVLFVD
Trigger: GTCCACAAAAAGAACATGCCAAGGACCAAGAGTCAT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCAGTTAGCAAGTAGCTaGGAAAACAGCCCTGTTCTA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFQLASS*ENSPVL
Trigger: TAGAACAGGGCTGTTTTCCCAGCTACTTGCTAACTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATGCTTTTTAAGAAGCTaGATGCTAACTTCAGATGGC +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTCFLRS*MLTSDG
Trigger: GCCATCTGAAGTTAGCATCCAGCTTCTTAAAAAGCA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGGAGATAGAGCTTATTaGGCTGTTTCCCTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIGDRAY*AVSLVH
Trigger: ATGAACCAGGGAAACAGCCCAATAAGCTCTATCTCC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATTTTATATGGGGAGATaGCAGCAACTATACATCTAT +
Preference number: 4 (lower is better)
Translates to: ILTGLHISILGMNHNSSKFYMGR*QQLYIY
Trigger: ATAGATGTATAGTTGCTGCCATCTCCCCATATAAAA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATCCATCACTGTATCCTaGTGGCTCTATGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVSITVS*WLYDCR
Trigger: TCTACAGTCATAGAGCCACCAGGATACAGTGATGGA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTCCATCACTGTATCCTaGTGGCTCTATGACTGTAGA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFSITVS*WLYDCR
Trigger: TCTACAGTCATAGAGCCACCAGGATACAGTGATGGA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTACTTTGCAGGTCATTTaGTCTCACCAGAGCAAACGA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFTLQVI*SHQSKR
Trigger: TCGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATTCTTAAAAGGTCTCTaGAGACAGCCATATCCACAG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSFLKGL*RQPYPQ
Trigger: CTGTGGATATGGCTGTCTTCAGAGACCTTTTAAGAA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACATCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 4 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGAGAATGGAATCAAGTaGCACTTTGCAGGTCATTTG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSENGIK*HFAGHL
Trigger: CAAATGACCTGCAAAGTGTCACTTGATTCCATTCTC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTCCTCTGCACTTTATaGAGAAGCCTATCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIFLCTL*RSLSFC
Trigger: GCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR GCA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGCTGTAGAATTCATCTaGTGTTTCACAACATTCTAT +
Preference number: 4 (lower is better)
Translates to: SQYICVQRALNPPIALKEAVEFI*CFTTFY
Trigger: ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATTAGAGCCATTCAGCTaGAACCCTTATACTACTGTG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSLEPFS*NPYTTV
Trigger: CACAGTAGTATAAGGGTTGCAGCTGAATGGCTCTAA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTATTAAACCCACCTATTaGACTGAAGGAAATGTGGCT +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPIKPTY*TEGNVA
Trigger: AGCCACATTTCCTTCAGTGCAATAGGTGGGTTTAAT...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTCATCAACAATATTCCTaGAAGTATCGCCAATCGTCT +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPHQQYS*KYRQSS
Trigger: AGACGATTGGCGATACTTGCAGGAATATTGTTGATG...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAACTTGGTACAATGCATaGATGTTATTGGTACACAGA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTTWYNA*MLLVHR
Trigger: TCTGTGTACCAATAACATGCATGCATTGTACCAAGT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAACAGTGTTCCATGCTTaGACTCAGAAAATGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVTVFHA*TQKMAE
Trigger: TTCTGCCATTTTCTGAGTGCAAGCATGGAACACTGT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTAGGATGTTAAAGCCTTaGCAGTACCCAACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFRMLKP*QYPTVL
Trigger: CAAAACTGTTGGGTACTGCCAAGGCTTTAACATCCT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAGGATGTTAAAGCCTTaGCAGTACCCAACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSRMLKP*QYPTVL
Trigger: CAAAACTGTTGGGTACTGCCAAGGCTTTAACATCCT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGCACTGAAGGAAATGTaGCTAAGTCACTTGGAATAC +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIALKEM*LSHLEY
Trigger: GTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAATAAACAGTCTGCATaGGTTCATGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVNKQSA*VHGFAE
Trigger: TTCTGCAAAGCCATGAACTCATGCAGACTGTTTATT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAAATAAACAGTCTGCATaGGTTCATGGCTTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALINKQSA*VHGFAE
Trigger: TTCTGCAAAGCCATGAACTCATGCAGACTGTTTATT...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAACTACTGTGAAAAGGTaGGTCCAGATACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSTTVKR*VQIQSF
Trigger: GAAACTTTGTATCTGGACTCACCTTTTCACAGTAGT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGACAAACATGAAGGCTaGGTCTATTCCTCTAATGAT +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSDKHEG*VYSSND
Trigger: ATCATTAGAGGAATAGACTCAGCCTTCATGTTTGTC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR TCA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGCAAAGAAAAGGATATaGGGTGGAAACACTATTATC +
Preference number: 4 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPAKKRI*GGNTII
Trigger: GATAATAGTGTTTCCACCTCATATCCTTTTCTTTGC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGTGCAAATAATGATCTaGCAAGGTCAACCAAACCTT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFVQIMI*QGQPNL
Trigger: AAGGTTTGGTTGACCTTGGCAGATCATTATTTGCAC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAGAGTCAGAAACCACTaGATCGTGAAGACATTTGTA +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGRVRNH*IVKTFV
Trigger: TACAAATGTCTTCACGATGCAGTGGTTTCTGACTCT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAATGAGTTCATGGCTTTaGAGAAGATCATTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVMSSWL*RRSFSS
Trigger: GCTAGAGAATGATCTTCTGCAAAGCCATGAACTCAT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTTTAATTCGAGAGTACTaGCGCTTCAGTGCATTGATA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFLIREY*RFSALI
Trigger: TATCAATGCACTGAAGCGGCAGTACTCTCGAATTAA...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTAATTCGAGAGTACTaGCGCTTCAGTGCATTGATA +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALILIREY*RFSALI
Trigger: TATCAATGCACTGAAGCGGCAGTACTCTCGAATTAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGATTACTTGGTACAATaGATGCATGTTATTGGTACA +
Preference number: 4 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTDYLVQ*MHVIGT
Trigger: TGTACCAATAACATGCATGCATTGTACCAAGTAATC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAAGACAGCAAAGAAAGTaGCTCAGAAACGATGTAAAG +
Preference number: 4 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVRQQRK*LRNDVK
Trigger: CTTTACATCGTTTCTGAGCCACTTTCTTTGCTGTCT...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTCTGTAAAGTTTAGCTaGTGGAAGAAAATGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGSVKFS*WKKMVS
Trigger: TGACACCATTTTCTTCCATCAGCTAAACTTTACAGA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR TCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGCAAGGCTCATAAATTaGCCAATTCACATTGTGATT +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFARLIN*PIHIVI
Trigger: AATCACAATGTGAATTGGTCAATTTATGAGCCTTGC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACATACTGTTAAAAGCTaGATGGTATTCACTTCGACA +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIHTVKS*MVFTST
Trigger: TGTCGAAGTGAATACCATGCAGCTTTTAACAGTATG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATGTGGTAGAGGCTACTaGAGGTTTCTTTATTTTCTA +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALICGRGY*RFLYFL
Trigger: TAGAAAATAAAGAAACCTGCAGTAGCCTCTACCACA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAGTACTTCTGGTGTTTaGATACAGTGTCCAATACAT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGSTSGV*IQCPIH
Trigger: ATGTATTGGACACTGTATGCAAACACCAGAAGTACT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCATTGATACTAAGTTTGTaGACAGCAATGGTACAATCC +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSLILSL*TAMVQS
Trigger: GGATTGTACCATTGCTGTCCACAAACTTAGTATCAA...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCTTGCACTCAGAAAATaGCAGAACAGTTACAACAAT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGLALRK*QNSYNN
Trigger: ATTGTTGTAACTGTTCTGCCATTTTCTGAGTGCAAG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTAAGAGAGTTTTTATATaGGGAGATGGCAGCAACTAT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGKRVFI*GDGSNY
Trigger: ATAGTTGCTGCCATCTCCCCATATAAAAACTCTCTT...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
3UTR CAA 72 bp AAGGCTCATAAATTGACCAATTCACATTGTGATTACTaGGTACAATGCATGCATGTTATTGGTACACAGAGT +
Preference number: 4 (lower is better)
Translates to: KAHKLTNSHCDY*VQCMHVIGTQS
Trigger: ACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR GCA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTGCTGTAGAATTCATCTaGTGTTTCACAACATTCTAT +
Preference number: 4 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGAVEFI*CFTTFY
Trigger: ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGC...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR GCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACCACAATATTTATTTTaGCACAAGAATCCACTTCGT +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSPQYLF*HKNPLR
Trigger: ACGAAGTGGATTCTTGTGGCAAAATAAATATTGTGG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTTCCTAAAAGAAGGTaGTTTATAACTGGAGAACTG +
Preference number: 4 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIFPKRR*FITGEL
Trigger: CAGTTCTCCAGTTATAAACCACCTTCTTTTAGGAAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCACATTGTGATTACTTaGTACAATGCATGCATGTTA +
Preference number: 4 (lower is better)
Translates to: CIRSSAGLSIEISTDERFHIVIT*YNACML
Trigger: TAACATGCATGCATTGTACCAAGTAATCACAATGTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CCA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACACATTGTGATTACTTaGTACAATGCATGCATGTTA +
Preference number: 4 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSHIVIT*YNACML
Trigger: TAACATGCATGCATTGTACCAAGTAATCACAATGTG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS GCA 90 bp GGAAGGACGTCCATGGTCCCCGGCGCGCGGCTGCCCGGCTCCCGCTaGTCCTCCCGCCTCGCGGCGCCGGCCAGTTCCGGGAGGAGGCGC +
Preference number: 5 (lower is better)
Translates to: GRTSMVPGARLPGSR*SSRLAAPASSGRRR
Trigger: GCGCCTCCTCCCGGAACTGGCCGGCGCCGCGAGGCGGGAGGAGCAGCGGGAGCCGGGCAGCCGCGCGCCGGGGACCATGGACGTCCTTCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS CCA 90 bp GGCGCCGGCCAGTTCCGGGAGGAGGCGCGGCTTCGTCCTCGCCGGTaGTGCCCTCCCGGGCGCGGCGCCAGCGGGCTCTGGATCCCCGAG +
Preference number: 5 (lower is better)
Translates to: GAGQFREEARLRPRR*CPPGRGASGLWIPE
Trigger: CTCGGGGATCCAGAGCCCGCTGGCGCCGCGCCCGGGAGGGCACCACCGGCGAGGACGAAGCCGCGCCTCCTCCCGGAACTGGCCGGCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 90 bp GCCGGCCAGTTCCGGGAGGAGGCGCGGCTTCGTCCTCGCCGGTGGTaGCCTCCCGGGCGCGGCGCCAGCGGGCTCTGGATCCCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: AGQFREEARLRPRRW*PPGRGASGLWIPEV
Trigger: CACCTCGGGGATCCAGAGCCCGCTGGCGCCGCGCCCGGGAGGGCACCACCGGCGAGGACGAAGCCGCGCCTCCTCCCGGAACTGGCCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 90 bp GTCGCTCCTGCAGCTCCTGCAGCACGCGGGAGTCGCCGGCACCGCTaGGGCCGCCCAGGACCACGTCGGAGCCCGAGGCCTCGGTGGAGC +
Preference number: 5 (lower is better)
Translates to: VAPAAPAARGSRRHR*GRPGPRRSPRPRWS
Trigger: GCTCCACCGAGGCCTCGGGCTCCGACGTGGTCCTGGGCGGCCGCAGCGGTGCCGGCGACTCCCGCGTGCTGCAGGAGCTGCAGGAGCGAC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 90 bp CACCTGAGCCGCTCCCCTCCGCTCCGGACCGGGCGAGAAGGAGACTaGCACGCCACTGAGCTACCTGGGGCCACCTGCTGCCCGGGCCCG +
Preference number: 5 (lower is better)
Translates to: HLSRSPPLRTGREGD*HATELPGATCCPGP
Trigger: CGGGCCCGGGCAGCAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTCTCCTTCTCGCCCGGTCCGGAGCGGAGGGGAGCGGCTCAGGTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS TCA 90 bp CTCGCTGAGCGGCTGAGCTCGCGGAGCTGGGTGAGTGTCTGCGGCTaGCCGGCCCGTGGGAGCAGGGAGCGCACAGCCGGCTGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LAERLSSRSWVSVCG*PARGSRERTAGWCW
Trigger: CCAGCACCAGCCGGCTGTGCGCTCCCTGCTCCCACGGGCCGGTCAGCCGCAGACACTCACCCAGCTCCGCGAGCTCAGCCGCTCAGCGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS TCA 90 bp CTCCCCTCCGCTCCGGACCGGGCGAGAAGGAGACTGCCACGCCACTaGGCTACCTGGGGCCACCTGCTGCCCGGGCCCGGCCTCTACCCA +
Preference number: 5 (lower is better)
Translates to: LPSAPDRARRRLPRH*ATWGHLLPGPGLYP
Trigger: TGGGTAGAGGCCGGGCCCGGGCAGCAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTCTCCTTCTCGCCCGGTCCGGAGCGGAGGGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 90 bp GGGCGAGAAGGAGACTGCCACGCCACTGAGCTACCTGGGGCCACCTaGTGCCCGGGCCCGGCCTCTACCCAGAGCGCTCTCCCGTGCGCG +
Preference number: 5 (lower is better)
Translates to: GREGDCHATELPGAT*CPGPASTQSALPCA
Trigger: CGCGCACGGGAGAGCGCTCTGGGTAGAGGCCGGGCCCGGGCAGCAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTCTCCTTCTCGCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS CCA 90 bp GCTGAGCTCGCGGAGCTGGGTGAGTGTCTGCGGCTGACCGGCCCGTaGGAGCAGGGAGCGCACAGCCGGCTGGTGCTGGAGGGTCACGGG +
Preference number: 5 (lower is better)
Translates to: AELAELGECLRLTGP*EQGAHSRLVLEGHG
Trigger: CCCGTGACCCTCCAGCACCAGCCGGCTGTGCGCTCCCTGCTCCCACGGGCCGGTCAGCCGCAGACACTCACCCAGCTCCGCGAGCTCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS GCA 90 bp CGAGAAGGAGACTGCCACGCCACTGAGCTACCTGGGGCCACCTGCTaGCCGGGCCCGGCCTCTACCCAGAGCGCTCTCCCGTGCGCGAGA +
Preference number: 5 (lower is better)
Translates to: REGDCHATELPGATC*PGPASTQSALPCAR
Trigger: TCTCGCGCACGGGAGAGCGCTCTGGGTAGAGGCCGGGCCCGGGCAGCAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTCTCCTTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS TCA 90 bp TCTGGCACGGCTACCGTCCGTCTCGGTCCCCGCTACCCCACTCGCTaGGCGGCTGAGCTCGCGGAGCTGGGTGAGTGTCTGCGGCTGACC +
Preference number: 5 (lower is better)
Translates to: SGTATVRLGPRYPTR*AAELAELGECLRLT
Trigger: GGTCAGCCGCAGACACTCACCCAGCTCCGCGAGCTCAGCCGCTCAGCGAGTGGGGTAGCGGGGACCGAGACGGACGGTAGCCGTGCCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS-3UTR CAA 90 bp CTTGCTGGCCTCGTTCTGCTCATCTATCAGCCCTACGGTGTCCCCACAGCCCGGCTGGTCACTGGCCCTTaGTCTGCCCTGATGTACACC +
Preference number: 5 (lower is better)
Translates to: LAGLVLLIYQPYGVPTARLVTGP*SALMYT
Trigger: GGTGTACATCAGGGCAGACAAAGGGCCAGTGACCAG...CCGGGCTGTGGGGACACCGTAGGGCTGATAGATGAGCAGAACGAGGCCAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS GCA 90 bp TTTGCAGCCACTGTCTTCCTCCTCCGACCTGCAGTGTCAAACCTGTaGCACTCTCCGCCCCCACACACCTCTCGCAAGGTCTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: FAATVFLLRPAVSNL*HSPPPHTSRKVWLP
Trigger: AGGAAGCCAGACCTTGCGAGAGGTGTGTGGGGGCGGAGAGTGGCACAGGTTTGACACTGCAGGTCGGAGGAGGAAGACAGTGGCTGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539120.1
CDS GCA 90 bp AACACCCGATTTTGCCTTTGCAGCCACTGTCTTCCTCCTCCGACCTaGAGTGTCAAACCTGTGCCACTCTCCGCCCCCACACACCTCTCG +
Preference number: 5 (lower is better)
Translates to: NTRFCLCSHCLPPPT*SVKPVPLSAPTHLS
Trigger: CGAGAGGTGTGTGGGGGCGGAGAGTGGCACAGGTTTGACACTGCAGGTCGGAGGAGGAAGACAGTGGCTGCAAAGGCAAAATCGGGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539120.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAACTGGTCACTGGCCCTTaGTCTGCCCTGATGTACACC +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQLVTGP*SALMYT
Trigger: GGTGTACATCAGGGCAGACAAAGGGCCAGTGACCAG...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACCCCAGCCCATTGGTCTaGCTGGCCTCGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LSLLATVRTTACAVKVLDPSPLV*LASFCS
Trigger: TGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGG...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAGATTTCCGCAGGGGCTaGACGCTGGGAAAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQDFRRG*TLGKGL
Trigger: TAGCCCTTTTCCCAGCGTCAAGCCCCTGCGGAAATC...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGATTTCCGCAGGGGCTaGACGCTGGGAAAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: RGAIPDPLGERELERAGVDFRRG*TLGKGL
Trigger: TAGCCCTTTTCCCAGCGTCAAGCCCCTGCGGAAATC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CTCAGCCTCCTGGCCACAGTAAGAACTACAGCCTGTGCGGTGAAGGTCCTTGACAGAGAACTGGAAGGTTaGGGGGTGCTGTCACAGGGA +
Preference number: 5 (lower is better)
Translates to: LSLLATVRTTACAVKVLDRELEG*GVLSQG
Trigger: TCCCTGTGACAGCACCCCCAAACCTTCCAGTTCTCT...GTCAAGGACCTTCACCGCACAGGCTGTAGTTCTTACTGTGGCCAGGAGGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RARKGRSERELESTGAFSARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCGTCAGACATTCAGCATaGGGAGATGGCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: RARKGRSERELESTGAFSVRHSA*GDGQQG
Trigger: TCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGAC...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSPQLCQ*WERERS
Trigger: GCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGG...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQCRFSA*ISVVMR
Trigger: ACGCATGACCACAGATATCAATGCACTGAAGCGGCA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGCTTTGCTGGTGGCTTaGTTTTCTTCGGGTGCACTC +
Preference number: 5 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCALLVA*FSSGAL
Trigger: GAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGC...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTACTGCCTTGGGGAGCTTaGCTGGTGGCTTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVLPWGA*LVALFS
Trigger: AGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAG...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCTTTCCACCGCCGGGTTaGCTGAAGCTCCTACTCATT +
Preference number: 5 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCFPPPG*LKLLLI
Trigger: AATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAA...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TTTGAGTTGCTGCCTTGGGGAGCTTTGCTGGTGGCTTTGTTTTCTTCGGGTGCAAGCCTGGCAACTGCCTaGAGAGCATCGTACCACTGC +
Preference number: 5 (lower is better)
Translates to: FELLPWGALLVALFSSGASLATA*RASYHC
Trigger: GCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGCT...TGCACCCGAAGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAGCAACTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGCTTTGCTGGTGGCTTaGTTTTCTTCGGGTGCACTC +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSALLVA*FSSGAL
Trigger: GAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCCACTTTGCAGGTCATTaGGTCTCACCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCHFAGH*VSPEQT
Trigger: CGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTG...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS TCA 90 bp CCACTGCATTCCAGCATTCCAGCCTGGCAACAGCACGAGACTGTCTaGGCATACTGTTCTGCCATGTTCTCTTCTGTGACACAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: PLHSSIPAWQQHETV*AYCSAMFSSVTQPA
Trigger: TGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACAGTCTCGTGCTGTTGCCAGGCTGGAATGCTGGAATGCAGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS GCA 90 bp CATTCCAGCCTGGCAACAGCACGAGACTGTCTGAGCATACTGTTCTaGCATGTTCTCTTCTGTGACACAGCCTGCAAGCAGGCAGTCACA +
Preference number: 5 (lower is better)
Translates to: HSSLATARDCLSILF*HVLFCDTACKQAVT
Trigger: TGTGACTGCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACAGTCTCGTGCTGTTGCCAGGCTGGAATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAGATGCCGAAGTAACTaGGCCGACTGGATGCCAATT +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSRCRSN*ADWMPI
Trigger: AATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCAGGATGTTAAAGCCTaGGCAGTACCCAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RGAIPDPLGERELERAGVQDVKA*AVPNSF
Trigger: AAAACTGTTGGGTACTGCCAAGGCTTTAACATCCTG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGCTAGAAAGGGCAGGAGTGAGAGGGAGCTAGAAAGCACTGGGGCCTTCTCCAGAGTGAATTTCAACTaGGTATCAACTCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: RARKGRSERELESTGAFSRVNFN*VSTPGS
Trigger: GGAGCCGGGAGTTGATACCAAGTTGAAATTCACTCT...GGAGAAGGCCCCAGTGCTTTCTAGCTCCCTCTCACTCCTGCCCTTTCTAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CAA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTGGTCACTGGCCCTTaGTCTGCCCTGATGTACACC +
Preference number: 5 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLVTGP*SALMYT
Trigger: GGTGTACATCAGGGCAGACAAAGGGCCAGTGACCAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATGGATGACAGCATTCTaGGCAGCTCTGTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQWMTAF*AALLVI
Trigger: AATGACTAACAGAGCTGCCAAGAATGCTGTCATCCA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGGATGACTCTTGGTCCTaGGCATGTTCTTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: RGAIPDPLGERELERAGVDDSWS*ACSFCG
Trigger: TCCACAAAAAGAACATGCCAAGGACCAAGAGTCATC...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGGTGCTATCCCTGACCCGCTGGGTGAGAGAGAGCTAGAAAGGGCAGGAGTGCCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 5 (lower is better)
Translates to: RGAIPDPLGERELERAGVPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...CACTCCTGCCCTTTCTAGCTCTCTCTCACCCAGCGGGTCAGGGATAGCACCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAACAGTGTTCCATGCTaGCACTCAGAAAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQNSVPC*HSENGR
Trigger: TCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTT...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCAGAGAACTGGAAGGTTaGGGGGTGCTGTCACAGGGA +
Preference number: 5 (lower is better)
Translates to: KSSVPLRIKALLERRTQTRELEG*GVLSQG
Trigger: TCCCTGTGACAGCACCCCCAAACCTTCCAGTTCTCT...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATCATTAACCATTTCCTaGAACCCAGACCATCAGGGA +
Preference number: 5 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVSLTIS*NPDHQG
Trigger: TCCCTGATGGTCTGGGTTCAAGGAAATGGTTAATGA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVSPYWS*YMLCGR
Trigger: TCTACCACACAGCATGTACAAAGACCAGTATGGACT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCSPYWS*YMLCGR
Trigger: TCTACCACACAGCATGTACAAAGACCAGTATGGACT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAAGCCTGGCAACTGCCTaGAGAGCATCGTACCACTGC +
Preference number: 5 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVSLATA*RASYHC
Trigger: GCAGTGGTACGATGCTCTCAAGGCAGTTGCCAGGCT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRPQLCQ*WERERS
Trigger: GCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTGATGACTCTTGGTCCTaGGCATGTTCTTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSDDSWS*ACSFCG
Trigger: TCCACAAAAAGAACATGCCAAGGACCAAGAGTCATC...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCCCAGCCCATTGGTCTaGCTGGCCTCGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKPSPLV*LASFCS
Trigger: TGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAACCCAGCCCATTGGTCTaGCTGGCCTCGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQPSPLV*LASFCS
Trigger: TGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGG...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: APHGAVEFICCFTTFYLLARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTTTCTCCTCCATTCCTTaGGTATTCCTGTGGATAGCC +
Preference number: 5 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSFSSIP*VFLWIA
Trigger: GGCTATCCACAGGAATACCAAAGGAATGGAGGAGAA...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp TCCACCGCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGTGGATGACAGCATTCTaGGCAGCTCTGTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: STAGFAEAPTHLRKVHSWWMTAF*AALLVI
Trigger: AATGACTAACAGAGCTGCCAAGAATGCTGTCATCCA...CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGTTTCCACCGCCGGGTTaGCTGAAGCTCCTACTCATT +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRFPPPG*LKLLLI
Trigger: AATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAA...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTAAAGTACTTCTGGTGTTaGCATACAGTGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVKYFWC*HTVSNT
Trigger: TGTATTGGACACTGTATGCAAACACCAGAAGTACTT...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCAGGCCAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAATCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: AGQAPHGAHQVIRTTEDQSRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...TTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTGGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ACACAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCAGAGTGAATTTCAACTaGGTATCAACTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: TQTSGKAQWREQAVRSNCRVNFN*VSTPEH
Trigger: ATGCTCAGGAGTTGATACCAAGTTGAAATTCACTCT...GCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS GCA 90 bp GCCTGCAAGCAGGCAGTCACAATATCACAGTTCCTCTGCACTTTATaGAGAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTTGGCC +
Preference number: 5 (lower is better)
Translates to: ACKQAVTISQFLCTL*RSLSFCFRCRSNLA
Trigger: GGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTGCTTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 90 bp CTCCTGAGCATACTGTTCTGCCATGTTCTCTTCTGTGACACAGCCTaGAAGCAGGCAGTCACAATATCACAGTTCCTCTGCACTTTATGC +
Preference number: 5 (lower is better)
Translates to: LLSILFCHVLFCDTA*KQAVTISQFLCTLC
Trigger: GCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674237.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACAGGGCATCCCCTTCATaGCCTTCCATCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNRASPS*PSITSR
Trigger: TCTGGAAGTGATGGAAGGCAATGAAGGGGATGCCCT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATAGGGCATCCCCTTCATaGCCTTCCATCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHRASPS*PSITSR
Trigger: TCTGGAAGTGATGGAAGGCAATGAAGGGGATGCCCT...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGAGACCCGGTCAGCTaGTCCTGCCGCATCCGAGAG +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTRDPVS*SCRIRE
Trigger: CTCTCGGATGCGGCAGGACAAGCTGACCGGGTCTCT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGTTCGCCACGGGGAGTaGAGCTTCGTCTTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCVRHGE*SFVLRS
Trigger: AGACCTTAAGACGAAGCTCAACTCCCCGTGGCGAAC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGTTCGCCACGGGGAGTaGAGCTTCGTCTTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVVRHGE*SFVLRS
Trigger: AGACCTTAAGACGAAGCTCAACTCCCCGTGGCGAAC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTACTGCCTTGGGGAGCTTaGCTGGTGGCTTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVLPWGA*LVALFS
Trigger: AGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAG...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCTGCCTTGGGGAGCTTaGCTGGTGGCTTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHLPWGA*LVALFS
Trigger: AGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAAACCTCAGGAAAAGCTCAGTGGCGCGAGCAAGCTGTCCGGAGCAACTGCGTATCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QTSGKAQWREQAVRSNCVSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...TACGCAGTTGCTCCGGACAGCTTGCTCGCGCCACTGAGCTTTTCCTGAGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TCCAAGACACCCCACTGCATTAACGACAGCATCCTCATCGTCTGGGTCATTCTCTCATTAACCATTTCCTaGAACCCAGACCATCAGGGA +
Preference number: 5 (lower is better)
Translates to: SKTPHCINDSILIVWVILSLTIS*NPDHQG
Trigger: TCCCTGATGGTCTGGGTTCAAGGAAATGGTTAATGA...GAGAATGACCCAGACGATGAGGATGCTGTCGTTAATGCAGTGGGGTGTCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp GCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATCTGCTCAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: APHGAVEFICCFTTFYLLRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...GAGCAGATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGTCAGACATTCAGCATaGGGAGATGGCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: REWNQVTLCRSFGLTRANVRHSA*GDGQQG
Trigger: TCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGAC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS TCA 90 bp CGTACCACTGCTGAAAACCATTTTGACCTAAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAACTCCCGGCTCCAGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: RTTAENHFDLKMAQE*ISTWYQLPAPGCTA
Trigger: TGCTGTGCACCCTGGAGCCGGGAGTTGATACCAAGTTGAAATTCACTCTTGAGCCATCTTTAGGTCAAAATGGTTTTCAGCAGTGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS GCA 90 bp TGTGACACAGCCTGCAAGCAGGCAGTCACAATATCACAGTTCCTCTaGACTTTATGCAGAAGCCTATCTTTCTGCTTCAGATGCCGAAGT +
Preference number: 5 (lower is better)
Translates to: CDTACKQAVTISQFL*TLCRSLSFCFRCRS
Trigger: ACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTGCTTGCAGGCTGTGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 90 bp TGTCTGAGCATACTGTTCTGCCATGTTCTCTTCTGTGACACAGCCTaGAAGCAGGCAGTCACAATATCACAGTTCCTCTGCACTTTATGC +
Preference number: 5 (lower is better)
Translates to: CLSILFCHVLFCDTA*KQAVTISQFLCTLC
Trigger: GCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGGGCATCCCCTTCATaGCCTTCCATCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVRASPS*PSITSR
Trigger: TCTGGAAGTGATGGAAGGCAATGAAGGGGATGCCCT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGGTCTCTGAAGACAGCCATATCCACAGACAATGCCCGGAGATTATTGACGAAATGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: RSLKTAISTDNARRLLTKCRFSA*ISVVMR
Trigger: ACGCATGACCACAGATATCAATGCACTGAAGCGGCA...TTTCGTCAATAATCTCCGGGCATTGTCTGTGGATATGGCTGTCTTCAGAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACTGGTCACTGGCCCTTaGTCTGCCCTGATGTACACC +
Preference number: 5 (lower is better)
Translates to: SQYICVQRALNPPIALKELVTGP*SALMYT
Trigger: GGTGTACATCAGGGCAGACAAAGGGCCAGTGACCAG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGTTCGCCACGGGGAGTaGAGCTTCGTCTTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQVRHGE*SFVLRS
Trigger: AGACCTTAAGACGAAGCTCAACTCCCCGTGGCGAAC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 5 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 5 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CAGGCTCCGCATGGAGCCCATCAAGTCATCCGTACCACTGAGGATCAAAGCTCTTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: QAPHGAHQVIRTTEDQSSLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...AGAGCTTTGATCCTCAGTGGTACGGATGACTTGATGGGCTCCATGCGGAGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACAGGCATCAGAATGAGTaGATTCCCGGCAAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNRHQNE*IPGKRA
Trigger: AGCCCTTTTGCCGGGAATCAACTCATTCTGATGCCT...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AATTCAAGTAACAGAGTCACAGGTGCTGTGTTCTGGCTTCTGAGCAGAGGCCTTTACTCCCTTTCTCCATaGTGTGAGGACACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: NSSNRVTGAVFWLLSRGLYSLSP*CEDTVR
Trigger: TCTCACTGTGTCCTCACACAATGGAGAAAGGGAGTA...AAGGCCTCTGCTCAGAAGCCAGAACACAGCACCTGTGACTCTGTTACTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS TCA 90 bp GGGAATCTCCATCAGGAATTACAGGTAAAGAAACTCAAAGTGAGTTaGGGCCAGGTGTTTGATATTAGCCTGGGCAAGGTAGGGAGAGCT +
Preference number: 5 (lower is better)
Translates to: GNLHQELQVKKLKVS*GQVFDISLGKVGRA
Trigger: AGCTCTCCCTACCTTGCCCAGGCTAATATCAAACACCTGGCCTCAACTCACTTTGAGTTTCTTTACCTGTAATTCCTGATGGAGATTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434563.3
CDS GCA 90 bp GCCTATCTTTCTGCTTCAGATGCCGAAGTAACTTGGCCGACTGGATaGCAATTCTGTACTTTAGCTCTCGAAGGATCGTCTTCAGTTCAT +
Preference number: 5 (lower is better)
Translates to: AYLSASDAEVTWPTG*QFCTLALEGSSSVH
Trigger: ATGAACTGAAGACGATCCTTCGAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 90 bp CAGTTCCTCTGCACTTTATGCAGAAGCCTATCTTTCTGCTTCAGATaGCGAAGTAACTTGGCCGACTGGATGCCAATTCTGTACTTTAGC +
Preference number: 5 (lower is better)
Translates to: QFLCTLCRSLSFCFR*RSNLADWMPILYFS
Trigger: GCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS CCA 90 bp AGAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTTGGCCGACTaGATGCCAATTCTGTACTTTAGCTCTCGAAGGATCGTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: RSLSFCFRCRSNLAD*MPILYFSSRRIVFS
Trigger: ACTGAAGACGATCCTTCGAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS CCA 90 bp CTTTATGCAGAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTTaGCCGACTGGATGCCAATTCTGTACTTTAGCTCTCGAAGGATCG +
Preference number: 5 (lower is better)
Translates to: LYAEAYLSASDAEVT*PTGCQFCTLALEGS
Trigger: CGATCCTTCGAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGATGCCGAAGTAACTaGGCCGACTGGATGCCAATT +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCRCRSN*ADWMPI
Trigger: AATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACGTGAAGCGCATGGTTTaGTCCCAGTCAATGGCTATA +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNVKRMV*SQSMAI
Trigger: TATAGCCATTGACTGGGACAAAACCATGCGCTTCAC...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGAAGGGATGGAGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCGTGAAGCGCATGGTTTaGTCCCAGTCAATGGCTATA +
Preference number: 5 (lower is better)
Translates to: WKGWREWNQVTLCRSFGLVKRMV*SQSMAI
Trigger: TATAGCCATTGACTGGGACAAAACCATGCGCTTCAC...GAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCTCCATCCCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCAGGATGTTAAAGCCTaGGCAGTACCCAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRQDVKA*AVPNSF
Trigger: AAAACTGTTGGGTACTGCCAAGGCTTTAACATCCTG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACACGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACG +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTRFLST*LRMVPT
Trigger: CGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCG...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539867.6
CDS-3UTR CAA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAACCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: SQYICVQRALNPPIALKEPQLCQ*WERERS
Trigger: GCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGG...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGATGACTCTTGGTCCTaGGCATGTTCTTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: SVPSGDRSFESGGILVNGDDSWS*ACSFCG
Trigger: TCCACAAAAAGAACATGCCAAGGACCAAGAGTCATC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGATTTCCGCAGGGGCTaGACGCTGGGAAAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTDFRRG*TLGKGL
Trigger: TAGCCCTTTTCCCAGCGTCAAGCCCCTGCGGAAATC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAGATTTCCGCAGGGGCTaGACGCTGGGAAAAGGGCTA +
Preference number: 5 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKDFRRG*TLGKGL
Trigger: TAGCCCTTTTCCCAGCGTCAAGCCCCTGCGGAAATC...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGCCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGAGGGCACAGCATGTGTaGTTGATACTAAGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRRAQHV*LILSLW
Trigger: CCACAAACTTAGTATCAACAACACATGCTGTGCCCT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTAAGTACTTCTGGTGTTaGCATACAGTGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSKYFWC*HTVSNT
Trigger: TGTATTGGACACTGTATGCAAACACCAGAAGTACTT...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACTACTCCCTTTCTCCATaGTGTGAGGACACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNYSLSP*CEDTVR
Trigger: TCTCACTGTGTCCTCACACAATGGAGAAAGGGAGTA...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATACAGCTGTACAGCTCGTaGAGCAGCCCGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIQLYSS*SSPLTR
Trigger: CCTGGTGAGCGGGCTGCTCAACGAGCTGTACAGCTG...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 90 bp ACAATATCACAGTTCCTCTGCACTTTATGCAGAAGCCTATCTTTCTaGTTCAGATGCCGAAGTAACTTGGCCGACTGGATGCCAATTCTG +
Preference number: 5 (lower is better)
Translates to: TISQFLCTLCRSLSF*FRCRSNLADWMPIL
Trigger: CAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS-3UTR CAA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGTTCTCCTCCATTCCTTaGGTATTCCTGTGGATAGCC +
Preference number: 5 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKFSSIP*VFLWIA
Trigger: GGCTATCCACAGGAATACCAAAGGAATGGAGGAGAA...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGTGAAGCGCATGGTTTaGTCCCAGTCAATGGCTATA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCVKRMV*SQSMAI
Trigger: TATAGCCATTGACTGGGACAAAACCATGCGCTTCAC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: ILTGLHISILGMNHNSSKCRFSA*ISVVMR
Trigger: ACGCATGACCACAGATATCAATGCACTGAAGCGGCA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCCCAGCCCATTGGTCTaGCTGGCCTCGTTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGPSPLV*LASFCS
Trigger: TGAGCAGAACGAGGCCAGCAAGACCAATGGGCTGGG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACAGAGAACTGGAAGGTTaGGGGGTGCTGTCACAGGGA +
Preference number: 5 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNRELEG*GVLSQG
Trigger: TCCCTGTGACAGCACCCCCAAACCTTCCAGTTCTCT...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGTGGACAGCAATGGTACAATCCCAAGGACTTGTATAAGTGGCCTCTACCTCATCTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 5 (lower is better)
Translates to: CGQQWYNPKDLYKWPLPHLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...ATGAGGTAGAGGCCACTTATACAAGTCCTTGGGATTGTACCATTGCTGTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GCCGGGTTTGCTGAAGCTCCTACTCATTTGAGGAAAGTGCACAGTTGGGGTTCTCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 5 (lower is better)
Translates to: AGFAEAPTHLRKVHSWGSQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...AGAACCCCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTCAGCAAACCCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 5 (lower is better)
Translates to: SVPSGDRSFESGGILVNGNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACGCGAGGAGAAGGGGATaGAGGAGTGAGCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNARRRG*RSEPSV
Trigger: AACAGAAGGCTCACTCCTCAATCCCCTTCTCCTCGC...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp CCCACCTATTGCACTGAAGGAAATGTGGCTAAGTCACTTGGAATACCGAGAGTAAGGGCACAGCATGTGTaGTTGATACTAAGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: PTYCTEGNVAKSLGIPRVRAQHV*LILSLW
Trigger: CCACAAACTTAGTATCAACAACACATGCTGTGCCCT...TACTCTCGGTATTCCAAGTGACTTAGCCACATTTCCTTCAGTGCAATAGGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCGTCCACAGGCTGACATaGCTAACTAGATTTAGATCA +
Preference number: 5 (lower is better)
Translates to: SVPSGDRSFESGGILVNGVHRLT*LTRFRS
Trigger: TGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGAC...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAAGTGAAGCGCATGGTTTaGTCCCAGTCAATGGCTATA +
Preference number: 5 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQVKRMV*SQSMAI
Trigger: TATAGCCATTGACTGGGACAAAACCATGCGCTTCAC...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAAGGGCATCCCCTTCATaGCCTTCCATCACTTCCAGA +
Preference number: 5 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKRASPS*PSITSR
Trigger: TCTGGAAGTGATGGAAGGCAATGAAGGGGATGCCCT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AAGTCATCCGTACCACTGAGGATCAAAGCTCTCCTTGAGAGGCGAACACAAACCCTCTTTAATTTGTTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: KSSVPLRIKALLERRTQTLFNLF*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAG...GGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCCTCAGTGGTACGGATGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGTTCGCCACGGGGAGTaGAGCTTCGTCTTAAGGTCT +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPVRHGE*SFVLRS
Trigger: AGACCTTAAGACGAAGCTCAACTCCCCGTGGCGAAC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAACTGCCTTGGGGAGCTTaGCTGGTGGCTTTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKLPWGA*LVALFS
Trigger: AGAAAACAAAGCCACCAGCAAAGCTCCCCAAGGCAG...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGAAGCTCCTACTCATTaGAGGAAAGTGCACAGTTGG +
Preference number: 5 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYEAPTH*RKVHSW
Trigger: CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTCCATCTTCAGTTCCTTaGGGGGTAAAAATACCACGA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCPSSVP*GVKIPR
Trigger: TCGTGGTATTTTTACCCCCAAAGGAACTGAAGATGG...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACTCATTAACCATTTCCTaGAACCCAGACCATCAGGGA +
Preference number: 5 (lower is better)
Translates to: REWNQVTLCRSFGLTRANSLTIS*NPDHQG
Trigger: TCCCTGATGGTCTGGGTTCAAGGAAATGGTTAATGA...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTTCATTAACCATTTCCTaGAACCCAGACCATCAGGGA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCSLTIS*NPDHQG
Trigger: TCCCTGATGGTCTGGGTTCAAGGAAATGGTTAATGA...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGGGCACAGCATGTGTaGTTGATACTAAGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVRAQHV*LILSLW
Trigger: CCACAAACTTAGTATCAACAACACATGCTGTGCCCT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVSPYWS*YMLCGR
Trigger: TCTACCACACAGCATGTACAAAGACCAGTATGGACT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAACAGTGTTCCATGCTaGCACTCAGAAAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCNSVPC*HSENGR
Trigger: TCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTGAATCAAGTGACACTTaGCAGGTCATTTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCESSDT*QVIWSH
Trigger: GTGAGACCAAATGACCTGCAAAGTGTCACTTGATTC...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAGGATTACTCCTTTCATaGAAAGTGAAGCGCATGGTT +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVGLLLS*KVKRMV
Trigger: AACCATGCGCTTCACTTTCAATGAAAGGAGTAATCC...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGAGAATGGAATCAAGTGACACTTTGCAGGTCATTTGGTCTCACCAGAGCAAACGGATTACTCCTTTCATaGAAAGTGAAGCGCATGGTT +
Preference number: 5 (lower is better)
Translates to: REWNQVTLCRSFGLTRANGLLLS*KVKRMV
Trigger: AACCATGCGCTTCACTTTCAATGAAAGGAGTAATCC...GTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTGTCACTTGATTCCATTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAACAGGATGTTAAAGCCTaGGCAGTACCCAACAGTTTT +
Preference number: 5 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQQDVKA*AVPNSF
Trigger: AAAACTGTTGGGTACTGCCAAGGCTTTAACATCCTG...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTCCTCAACTCTGCCAATaGTGGGAAAGGGAACGGAGC +
Preference number: 5 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGPQLCQ*WERERS
Trigger: GCTCCGTTCCCTTTCCCACAATTGGCAGAGTTGAGG...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAATGCCGCTTCAGTGCATaGATATCTGTGGTCATGCGT +
Preference number: 5 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKCRFSA*ISVVMR
Trigger: ACGCATGACCACAGATATCAATGCACTGAAGCGGCA...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGATGACTCTTGGTCCTaGGCATGTTCTTTTTGTGGA +
Preference number: 5 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYDDSWS*ACSFCG
Trigger: TCCACAAAAAGAACATGCCAAGGACCAAGAGTCATC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGAAACCACTGCATCGTGAAGACATTTGTAAGTGGGGGCTCATATCCACCTACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 5 (lower is better)
Translates to: VRNHCIVKTFVSGGSYPPTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...AGGTGGATATGAGCCCCCACTTACAAATGTCTTCACGATGCAGTGGTTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp AACATGAAGGCTGAGTCTATTCCTCTAATGATGGCGAGGAGAAGGGGATTGAGGACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 5 (lower is better)
Translates to: NMKAESIPLMMARRRGLRTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...CCTCAATCCCCTTCTCCTCGCCATCATTAGAGGAATAGACTCAGCCTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAGCCAATACATCTGTGTACAACTGGTATGTGCATGCTaGAGTATTAGTAACACCCAG +
Preference number: 5 (lower is better)
Translates to: WLPSLGFYTLCSQYICVQLVCAC*SISNTQ
Trigger: CTGGGTGTTACTAATACTCAAGCATGCACATACCAG...TTGTACACAGATGTATTGGCTACATAGCGTGTAAAAACCAAGACTGGGAAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TCTGTACCATCTGGAGACAGGTCCTTTGAGTCAGGAGGGATTTTAGTGAATGGCTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: SVPSGDRSFESGGILVNGLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...GCCATTCACTAAAATCCCTCCTGACTCAAAGGACCTGTCTCCAGATGGTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGAAACCACTGCATCGTGAAGACATTTGTAAGTGGGGGCTCATATCCACCTTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: VRNHCIVKTFVSGGSYPPLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...AGGTGGATATGAGCCCCCACTTACAAATGTCTTCACGATGCAGTGGTTTCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAGTCCACAGGCTGACATaGCTAACTAGATTTAGATCA +
Preference number: 5 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQVHRLT*LTRFRS
Trigger: TGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGAC...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGTCAGACATTCAGCATaGGGAGATGGCCAGCAGGGA +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIVRHSA*GDGQQG
Trigger: TCCCTGCTGGCCATCTCCCAATGCTGAATGTCTGAC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACACACTTTGCAGGTCATTaGGTCTCACCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTHFAGH*VSPEQT
Trigger: CGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTG...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS TCA 90 bp CGTACCACTGCTGAAAACCATTTTGACCTAAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAACTCCTGAGCATACTGTTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: RTTAENHFDLKMAQE*ISTWYQLLSILFCH
Trigger: ATGGCAGAACAGTATGCTCAGGAGTTGATACCAAGTTGAAATTCACTCTTGAGCCATCTTTAGGTCAAAATGGTTTTCAGCAGTGGTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGCTTTGCTGGTGGCTTaGTTTTCTTCGGGTGCACTC +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSALLVA*FSSGAL
Trigger: GAGTGCACCCGAAGAAAACAAAGCCACCAGCAAAGC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAGAAGCTCCTACTCATTaGAGGAAAGTGCACAGTTGG +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTEAPTH*RKVHSW
Trigger: CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTC...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTTCCACCGCCGGGTTaGCTGAAGCTCCTACTCATT +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIFPPPG*LKLLLI
Trigger: AATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTTCCACCGCCGGGTTaGCTGAAGCTCCTACTCATT +
Preference number: 5 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGFPPPG*LKLLLI
Trigger: AATGAGTAGGAGCTTCAGCAAACCCGGCGGTGGAAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GGTAAGGCGCCCCATGGTGCTGTAGAATTCATCTGCTGTTTCACAACATTCTATTCACATTGTGATTACTaGGTACAATGCATGCATGTT +
Preference number: 5 (lower is better)
Translates to: GKAPHGAVEFICCFTTFYSHCDY*VQCMHV
Trigger: AACATGCATGCATTGTACCAAGTAATCACAATGTGA...ATAGAATGTTGTGAAACAGCAGATGAATTCTACAGCACCATGGGGCGCCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674171.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACTCACATTGTGATTACTaGGTACAATGCATGCATGTT +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNSHCDY*VQCMHV
Trigger: AACATGCATGCATTGTACCAAGTAATCACAATGTGA...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAAAAGTACTTCTGGTGTTaGCATACAGTGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQKYFWC*HTVSNT
Trigger: TGTATTGGACACTGTATGCAAACACCAGAAGTACTT...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTCAGGAGGGATTTTAGTGAATGGCTTCCCAGTCTTGGTTTTTACACGCTATGTAAGTACTTCTGGTGTTaGCATACAGTGTCCAATACA +
Preference number: 5 (lower is better)
Translates to: VRRDFSEWLPSLGFYTLCKYFWC*HTVSNT
Trigger: TGTATTGGACACTGTATGCAAACACCAGAAGTACTT...ACATAGCGTGTAAAAACCAAGACTGGGAAGCCATTCACTAAAATCCCTCCTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GGCTGCATCAACAATATTCCTGCAAGTATCGCCAATCGTCTTCCAGAGACAAACTCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GCINNIPASIANRLPETNSRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...GTTTGTCTCTGGAAGACGATTGGCGATACTTGCAGGAATATTGTTGATGCAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATGTCCACAGGCTGACATaGCTAACTAGATTTAGATCA +
Preference number: 5 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYVHRLT*LTRFRS
Trigger: TGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGAC...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGGCAGCAACTATACATCTATTCATACAGAATCCTTAATGCCATGCAGCTAAACTACTCCCTTTCTCCATaGTGTGAGGACACAGTGAGA +
Preference number: 5 (lower is better)
Translates to: WQQLYIYSYRILNAMQLNYSLSP*CEDTVR
Trigger: TCTCACTGTGTCCTCACACAATGGAGAAAGGGAGTA...GTTTAGCTGCATGGCATTAAGGATTCTGTATGAATAGATGTATAGTTGCTGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTCACTTTGCAGGTCATTaGGTCTCACCAGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPHFAGH*VSPEQT
Trigger: CGTTTGCTCTGGTGAGACCAAATGACCTGCAAAGTG...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTTCTCCTCCATTCCTTaGGTATTCCTGTGGATAGCC +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPFSSIP*VFLWIA
Trigger: GGCTATCCACAGGAATACCAAAGGAATGGAGGAGAA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAGGATTACTCCTTTCATaGAAAGTGAAGCGCATGGTT +
Preference number: 5 (lower is better)
Translates to: SQYICVQRALNPPIALKEGLLLS*KVKRMV
Trigger: AACCATGCGCTTCACTTTCAATGAAAGGAGTAATCC...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CTGGGGCCTTCTCCAGAGAAAGGCAGTGTTCAATTAACAAAGTACTCAACAAAGCTCTTTAATTTGTTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGPSPEKGSVQLTKYSTKLFNLF*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAG...CTTTGTTGAGTACTTTGTTAATTGAACACTGCCTTTCTCTGGAGAAGGCCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGGATCAAAGCTCTCCTaGAGAGGCGAACACAAACCT +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIGSKLS*RGEHKP
Trigger: AGGTTTGTGTTCGCCTCTCAAGGAGAGCTTTGATCC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTACAATCACGGTATAGGTCATaGTTGTGTTTTCTGTTCAAA +
Preference number: 5 (lower is better)
Translates to: HRAQHVLLILSLWTAMVQSRYRS*LCFLFK
Trigger: TTTGAACAGAAAACACAACAATGACCTATACCGTGA...TTGTACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTGAGAAAGAAATGTCTGTGTTTAAGCCACCTCAGTCTATGGTACTTTGTTACAAGGGCACAGCATGTGTaGTTGATACTAAGTTTGTGG +
Preference number: 5 (lower is better)
Translates to: VRKKCLCLSHLSLWYFVTRAQHV*LILSLW
Trigger: CCACAAACTTAGTATCAACAACACATGCTGTGCCCT...TGTAACAAAGTACCATAGACTGAGGTGGCTTAAACACAGACATTTCTTTCTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAAGGCAAGGCTCATAAATaGACCAATTCACATTGTGAT +
Preference number: 5 (lower is better)
Translates to: ILTGLHISILGMNHNSSKGKAHK*TNSHCD
Trigger: ATCACAATGTGAATTGGTCAATTTATGAGCCTTGCC...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp ATGACTATTCTGACTCATTTGAGAAGGGGCAAAGAAAAGGATATGAGGTGGAAAAGTCCATACTGGTCTTaGTACATGCTGTGTGGTAGA +
Preference number: 5 (lower is better)
Translates to: MTILTHLRRGKEKDMRWKSPYWS*YMLCGR
Trigger: TCTACCACACAGCATGTACAAAGACCAGTATGGACT...TTTCCACCTCATATCCTTTTCTTTGCCCCTTCTCAAATGAGTCAGAATAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GTTCACAGGGCACAGCATGTGTTGTTGATACTAAGTTTGTGGACAGCAATGGTAAGAGTGAATTTCAACTaGGTATCAACTCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: VHRAQHVLLILSLWTAMVRVNFN*VSTLLF
Trigger: GAAGAGAAGAGTTGATACCAAGTTGAAATTCACTCT...TACCATTGCTGTCCACAAACTTAGTATCAACAACACATGCTGTGCCCTGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATATTCTCCTCCATTCCTTaGGTATTCCTGTGGATAGCC +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIFSSIP*VFLWIA
Trigger: GGCTATCCACAGGAATACCAAAGGAATGGAGGAGAA...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTGGATGACAGCATTCTaGGCAGCTCTGTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPWMTAF*AALLVI
Trigger: AATGACTAACAGAGCTGCCAAGAATGCTGTCATCCA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGAAGCTCCTACTCATTaGAGGAAAGTGCACAGTTGG +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSEAPTH*RKVHSW
Trigger: CCAACTGTGCACTTTCCTCAAATGAGTAGGAGCTTC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp ATACTCACCGGCCTTCACATTTCCATCCTGGGGATGAATCATAATTCATCCAAATCACATTGTGATTACTaGGTACAATGCATGCATGTT +
Preference number: 5 (lower is better)
Translates to: ILTGLHISILGMNHNSSKSHCDY*VQCMHV
Trigger: AACATGCATGCATTGTACCAAGTAATCACAATGTGA...TTTGGATGAATTATGATTCATCCCCAGGATGGAAATGTGAAGGCCGGTGAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp GGAAAGAACAATTCTCCATTCAAGTCAGACATCCCTCAAGGGGAACATGACTATTCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: GKNNSPFKSDIPQGEHDYSRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...ATAGTCATGTTCCCCTTGAGGGATGTCTGACTTGAATGGAGAATTGTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAAAGAGTGAATTTCAACTaGGTATCAACTCCTGAGCAT +
Preference number: 5 (lower is better)
Translates to: SQYICVQRALNPPIALKERVNFN*VSTPEH
Trigger: ATGCTCAGGAGTTGATACCAAGTTGAAATTCACTCT...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTATGGATGACAGCATTCTaGGCAGCTCTGTTAGTCATT +
Preference number: 5 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVWMTAF*AALLVI
Trigger: AATGACTAACAGAGCTGCCAAGAATGCTGTCATCCA...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AGCCAATACATCTGTGTACAAAGAGCATTAAACCCACCTATTGCACTGAAGGAATCAAGAAACCACTACTaGTTAAGTACTTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SQYICVQRALNPPIALKESRNHY*LSTSGV
Trigger: AACACCAGAAGTACTTAACAAGTAGTGGTTTCTTGA...TTCCTTCAGTGCAATAGGTGGGTTTAATGCTCTTTGTACACAGATGTATTGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTGTCCACAGGCTGACATaGCTAACTAGATTTAGATCA +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPVHRLT*LTRFRS
Trigger: TGATCTAAATCTAGTTAGCAATGTCAGCCTGTGGAC...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAACAGTGTTCCATGCTaGCACTCAGAAAATGGCAGA +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSNSVPC*HSENGR
Trigger: TCTGCCATTTTCTGAGTGCAAGCATGGAACACTGTT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAGAATCAAGTGACACTTaGCAGGTCATTTGGTCTCAC +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSESSDT*QVIWSH
Trigger: GTGAGACCAAATGACCTGCAAAGTGTCACTTGATTC...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TGTGATTACTTGGTACAATGCATGCATGTTATTGGTACACAGAGTGCTTTAATAGGATTACTCCTTTCATaGAAAGTGAAGCGCATGGTT +
Preference number: 5 (lower is better)
Translates to: CDYLVQCMHVIGTQSALIGLLLS*KVKRMV
Trigger: AACCATGCGCTTCACTTTCAATGAAAGGAGTAATCC...TATTAAAGCACTCTGTGTACCAATAACATGCATGCATTGTACCAAGTAATCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCAAATGGCTTCCCAGTCTaGGTTTTTACACGCTATGTA +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSNGFPV*VFTRYV
Trigger: TACATAGCGTGTAAAAACCAAGACTGGGAAGCCATT...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp GAGTTTTTATATGGGGAGATGGCAGCAACTATACATCTATTCATACAGAATCCTTCACATTGTGATTACTaGGTACAATGCATGCATGTT +
Preference number: 5 (lower is better)
Translates to: EFLYGEMAATIHLFIQNPSHCDY*VQCMHV
Trigger: AACATGCATGCATTGTACCAAGTAATCACAATGTGA...AGGATTCTGTATGAATAGATGTATAGTTGCTGCCATCTCCCCATATAAAAACTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS-3UTR CAA 90 bp TCTAAAGTAGGCAAGGCTCATAAATTGACCAATTCACATTGTGATTACTTGGTAGGCAAGGCTCATAAATaGACCAATTCACATTGTGAT +
Preference number: 5 (lower is better)
Translates to: SKVGKAHKLTNSHCDYLVGKAHK*TNSHCD
Trigger: ATCACAATGTGAATTGGTCAATTTATGAGCCTTGCC...TACCAAGTAATCACAATGTGAATTGGTCAATTTATGAGCCTTGCCTACTTTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTGGCAAGGCTCATAAATaGACCAATTCACATTGTGAT +
Preference number: 5 (lower is better)
Translates to: CIRSSAGLSIEISTDERFGKAHK*TNSHCD
Trigger: ATCACAATGTGAATTGGTCAATTTATGAGCCTTGCC...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp AATTCTGACAAGGCCATTTTTACCTCAGAGGACTATTATCCTTTCACTTATTCACTCTTTAATTTGTTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: NSDKAIFTSEDYYPFTYSLFNLF*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAG...TGAATAAGTGAAAGGATAATAGTCCTCTGAGGTAAAAATGGCCTTGTCAGAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCTCTTTAATTTGTTTTaGGTACTTCTGCAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: CIRSSAGLSIEISTDERFLFNLF*VLLQFR
Trigger: CCTGAACTGCAGAAGTACCAAAAACAAATTAAAGAG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTACCACAATATTTATTTaGCCACAAGAATCCACTTCG +
Preference number: 5 (lower is better)
Translates to: CIRSSAGLSIEISTDERFTTIFI*PQESTS
Trigger: CGAAGTGGATTCTTGTGGCAAAATAAATATTGTGGT...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp TGCATAAGATCTTCAGCTGGGTTATCGATTGAAATTTCAACAGATGAAAGGTTTCAGCTGGGTTATCGATaGAAATTTCAACAGATGAAA +
Preference number: 5 (lower is better)
Translates to: CIRSSAGLSIEISTDERFQLGYR*KFQQMK
Trigger: TTTCATCTGTTGAAATTTCAATCGATAACCCAGCTG...AAACCTTTCATCTGTTGAAATTTCAATCGATAACCCAGCTGAAGATCTTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
ENST00000674237.1
CDS-3UTR CAA 90 bp CATAATTCATCCAAACATCTCCCCTATTCCCAGATGTTTATATTGTTTTCAGGTTTGTTGATACTAAGTTaGTGGACAGCAATGGTACAA +
Preference number: 5 (lower is better)
Translates to: HNSSKHLPYSQMFILFSGLLILS*WTAMVQ
Trigger: TTGTACCATTGCTGTCCACAAACTTAGTATCAACAA...ACCTGAAAACAATATAAACATCTGGGAATAGGGGAGATGTTTGGATGAATTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539867.6
ENST00000542120.6
ENST00000674171.1
CDS GCA 72 bp GCAGCTCCTGCAGCACGCGGGAGTCGCCGGCACCGCTaGGGCCGCCCAGGACCACGTCGGAGCCCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: AAPAARGSRRHR*GRPGPRRSPRP
Trigger: AGGCCTCGGGCTCCGACGTGGTCCTGGGCGGCCGCAGCGGTGCCGGCGACTCCCGCGTGCTGCAGGAGCTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS GCA 72 bp CCGGCCCGTGGGAGCAGGGAGCGCACAGCCGGCTGGTaGTGGAGGGTCACGGGGACTTACGGGGCACCGCGG +
Preference number: 6 (lower is better)
Translates to: PARGSRERTAGW*WRVTGTYGAPR
Trigger: CCGCGGTGCCCCGTAAGTCCCCGTGACCCTCCAGCACCAGCCGGCTGTGCGCTCCCTGCTCCCACGGGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS TCA 72 bp CGGCTGAGCTCGCGGAGCTGGGTGAGTGTCTGCGGCTaGCCGGCCCGTGGGAGCAGGGAGCGCACAGCCGGC +
Preference number: 6 (lower is better)
Translates to: RLSSRSWVSVCG*PARGSRERTAG
Trigger: GCCGGCTGTGCGCTCCCTGCTCCCACGGGCCGGTCAGCCGCAGACACTCACCCAGCTCCGCGAGCTCAGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS GCA 72 bp GACTGCCACGCCACTGAGCTACCTGGGGCCACCTGCTaGCCGGGCCCGGCCTCTACCCAGAGCGCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: DCHATELPGATC*PGPASTQSALP
Trigger: CGGGAGAGCGCTCTGGGTAGAGGCCGGGCCCGGGCAGCAGGTGGCCCCAGGTAGCTCAGTGGCGTGGCAGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542120.6
CDS CCA 72 bp TGCCACTCTCCGCCCCCACACACCTCTCGCAAGGTCTaGCTTCCTGCGAGCGGGGCACCGCGGGAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: CHSPPPHTSRKV*LPASGAPREPP
Trigger: CGGCGGCTCCCGCGGTGCCCCGCTCGCAGGAAGCCAGACCTTGCGAGAGGTGTGTGGGGGCGGAGAGTGGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539120.1
CDS CCA 72 bp GCGGAGCTGGGTGAGTGTCTGCGGCTGACCGGCCCGTaGGAGCAGGGAGCGCACAGCCGGCTGGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: AELGECLRLTGP*EQGAHSRLVLE
Trigger: CTCCAGCACCAGCCGGCTGTGCGCTCCCTGCTCCCACGGGCCGGTCAGCCGCAGACACTCACCCAGCTCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS CCA 72 bp AGCTTGTCCTGCCGCATCCGAGAGCGCCCCGGGCTCTaGCACGGCTACCGTCCGTCTCGGTCCCCGCTACCC +
Preference number: 6 (lower is better)
Translates to: SLSCRIRERPGL*HGYRPSRSPLP
Trigger: GGGTAGCGGGGACCGAGACGGACGGTAGCCGTGCCAGAGCCCGGGGCGCTCTCGGATGCGGCAGGACAAGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS CAA 90 bp GTGCACAGCAGCCGGGGCGCGGTCCGGGAAATGCAGCTGCGCTTCTaGAGCACATTGCTCAGGATGGTGCCCACGCCGCCGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: VHSSRGAVREMQLRF*STLLRMVPTPPPCR
Trigger: GCGGCAGGGCGGCGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATTTCCCGGACCGCGCCCCGGCTGCTGTGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS TCA 72 bp GCTACCGTCCGTCTCGGTCCCCGCTACCCCACTCGCTaGGCGGCTGAGCTCGCGGAGCTGGGTGAGTGTCTG +
Preference number: 6 (lower is better)
Translates to: ATVRLGPRYPTR*AAELAELGECL
Trigger: CAGACACTCACCCAGCTCCGCGAGCTCAGCCGCTCAGCGAGTGGGGTAGCGGGGACCGAGACGGACGGTAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS CAA 90 bp AGCCGGGGCGCGGTCCGGGAAATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCGCCGCCCTGCCGCTTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: SRGAVREMQLRFLST*LRMVPTPPPCRFRH
Trigger: ATGCCTGAAGCGGCAGGGCGGCGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATTTCCCGGACCGCGCCCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS CAA 72 bp GCGGTCCGGGAAATGCAGCTGCGCTTCTTGAGCACATaGCTCAGGATGGTGCCCACGCCGCCGCCCTGCCGC +
Preference number: 6 (lower is better)
Translates to: AVREMQLRFLST*LRMVPTPPPCR
Trigger: GCGGCAGGGCGGCGGCGTGGGCACCATCCTGAGCAATGTGCTCAAGAAGCGCAGCTGCATTTCCCGGACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS TCA 72 bp AGTTCATTAGCGTCTTTCTGCCGCAGGTACAGCATCTaGTGCCGCTGGCTCGGTCGCTCCTGCAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSLASFCRRYSI*CRWLGRSCSSC
Trigger: GCAGGAGCTGCAGGAGCGACCGAGCCAGCGGCATCAGATGCTGTACCTGCGGCAGAAAGACGCTAATGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456757.6
ENST00000542120.6
CDS GCA 72 bp TTTTGCCTTTGCAGCCACTGTCTTCCTCCTCCGACCTaGAGTGTCAAACCTGTGCCACTCTCCGCCCCCACA +
Preference number: 6 (lower is better)
Translates to: FCLCSHCLPPPT*SVKPVPLSAPT
Trigger: TGTGGGGGCGGAGAGTGGCACAGGTTTGACACTGCAGGTCGGAGGAGGAAGACAGTGGCTGCAAAGGCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539120.1
CDS GCA 72 bp CTGGCAACAGCACGAGACTGTCTGAGCATACTGTTCTaGCATGTTCTCTTCTGTGACACAGCCTGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: LATARDCLSILF*HVLFCDTACKQ
Trigger: CTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACAGTCTCGTGCTGTTGCCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS TCA 72 bp TCCAGCATTCCAGCCTGGCAACAGCACGAGACTGTCTaGGCATACTGTTCTGCCATGTTCTCTTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: SSIPAWQQHETV*AYCSAMFSSVT
Trigger: TGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACAGTCTCGTGCTGTTGCCAGGCTGGAATGCTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS TCA 72 bp CTGTCTGAGCATACTGTTCTGCCATGTTCTCTTCTGTaGCACAGCCTGCAAGCAGGCAGTCACAATATCACA +
Preference number: 6 (lower is better)
Translates to: LSEHTVLPCSLL*HSLQAGSHNIT
Trigger: TGTGATATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGACAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456757.6
CDS TCA 72 bp ACTCCTGAGCATACTGTTCTGCCATGTTCTCTTCTGTaGCACAGCCTGCAAGCAGGCAGTCACAATATCACA +
Preference number: 6 (lower is better)
Translates to: TPEHTVLPCSLL*HSLQAGSHNIT
Trigger: TGTGATATTGTGACTGCCTGCTTGCAGGCTGTGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGGAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674237.1
CDS GCA 72 bp TCTGCTTCAGATGCCGAAGTAACTTGGCCGACTGGATaGCAATTCTGTACTTTAGCTCTCGAAGGATCGTCT +
Preference number: 6 (lower is better)
Translates to: SASDAEVTWPTG*QFCTLALEGSS
Trigger: AGACGATCCTTCGAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 72 bp CAGTTCCTCTGCACTTTATGCAGAAGCCTATCTTTCTaGTTCAGATGCCGAAGTAACTTGGCCGACTGGATG +
Preference number: 6 (lower is better)
Translates to: QFLCTLCRSLSF*FRCRSNLADWM
Trigger: CATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 72 bp TGCACTTTATGCAGAAGCCTATCTTTCTGCTTCAGATaGCGAAGTAACTTGGCCGACTGGATGCCAATTCTG +
Preference number: 6 (lower is better)
Translates to: CTLCRSLSFCFR*RSNLADWMPIL
Trigger: CAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS GCA 72 bp GCCTGCAAGCAGGCAGTCACAATATCACAGTTCCTCTaGACTTTATGCAGAAGCCTATCTTTCTGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: ACKQAVTISQFL*TLCRSLSFCFR
Trigger: TCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTGCTTGCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS CCA 72 bp GAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTTaGCCGACTGGATGCCAATTCTGTACTTTAGCTCTC +
Preference number: 6 (lower is better)
Translates to: EAYLSASDAEVT*PTGCQFCTLAL
Trigger: GAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS CAA 90 bp ACTTTATGCAGAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTaGGCCGACTGGATGCCAATTCTGTACTTTAGCTCTCGAAGGATC +
Preference number: 6 (lower is better)
Translates to: TLCRSLSFCFRCRSN*ADWMPILYFSSRRI
Trigger: GATCCTTCGAGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS TCA 72 bp GCTGAAAACCATTTTGACCTAAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAACTCCCGGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: AENHFDLKMAQE*ISTWYQLPAPG
Trigger: CCCTGGAGCCGGGAGTTGATACCAAGTTGAAATTCACTCTTGAGCCATCTTTAGGTCAAAATGGTTTTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539867.6
ENST00000544457.1
CDS GCA 72 bp CAGGCAGTCACAATATCACAGTTCCTCTGCACTTTATaGAGAAGCCTATCTTTCTGCTTCAGATGCCGAAGT +
Preference number: 6 (lower is better)
Translates to: QAVTISQFLCTL*RSLSFCFRCRS
Trigger: ACTTCGGCATCTGAAGCAGAAAGATAGGCTTCTGCATAAAGTGCAGAGGAACTGTGATATTGTGACTGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS CAA 72 bp AGAAGCCTATCTTTCTGCTTCAGATGCCGAAGTAACTaGGCCGACTGGATGCCAATTCTGTACTTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: RSLSFCFRCRSN*ADWMPILYFSS
Trigger: AGAGCTAAAGTACAGAATTGGCATCCAGTCGGCCAAGTTACTTCGGCATCTGAAGCAGAAAGATAGGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000456757.6
ENST00000542120.6
ENST00000674237.1
CDS TCA 72 bp TGGCTCAAGAGTGAATTTCAACTTGGTATCAACTCCTaGGCATACTGTTCTGCCATGTTCTCTTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: WLKSEFQLGINS*AYCSAMFSSVT
Trigger: TGTCACAGAAGAGAACATGGCAGAACAGTATGCTCAGGAGTTGATACCAAGTTGAAATTCACTCTTGAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1
CDS TCA 72 bp GCTGAAAACCATTTTGACCTAAAGATGGCTCAAGAGTaGATTTCAACTTGGTATCAACTCCTGAGCATACTG +
Preference number: 6 (lower is better)
Translates to: AENHFDLKMAQE*ISTWYQLLSIL
Trigger: CAGTATGCTCAGGAGTTGATACCAAGTTGAAATTCACTCTTGAGCCATCTTTAGGTCAAAATGGTTTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674171.1
ENST00000674237.1