RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D24 (Homo sapiens)

Ensembl gene IDs: ENSG00000162065

Ensembl transcript IDs: ENST00000562105.2, ENST00000564879.2, ENST00000566853.1, ENST00000567020.6, ENST00000569874.2, ENST00000627285.1, ENST00000630263.2, ENST00000636980.1, ENST00000643767.1, ENST00000646147.1

Found 1443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGTGGCGAGCGGCCAGGAAGGGCGAGAGGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAGTGGGGCGGTGGGCTCGGCAGCCAT +
Preference number: 1 (lower is better)
Translates to: EVASGQEGREAVSGV*GGGVAEWGGGLGSH
Trigger: ATGGCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGCCTCTCGCCCTTCCTGGCCGCTCGCCACTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR GCA 90 bp GGTCCTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCC +
Preference number: 1 (lower is better)
Translates to: GPAVPQPCLPHGGFI*SLLPEAAAQPRPTA
Trigger: GGCGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 90 bp GTCGCCAGCCAGCCAGGCTGCAGGGCCCTGCTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGGGGCACCACAGGCCCACCCTTAGCT +
Preference number: 1 (lower is better)
Translates to: VASQPGCRALLRRAR*YAAPAGGTTGPPLA
Trigger: AGCTAAGGGTGGGCCTGTGGTGCCCCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTGGCTGGCTGGCGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp GAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTaGCCAGGGCCAGGGGAGGGCACGGGGCCTGGTGCAGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: EGGHASMQGGQGGAV*PGPGEGTGPGAEKQ
Trigger: CTGCTTCTCTGCACCAGGCCCCGTGCCCTCCCCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp CCGGTCCTTCCTCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGG +
Preference number: 1 (lower is better)
Translates to: PVLPPAPLCAQSEAT*ADGQGRLKPHGRSR
Trigger: CCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp CAGGCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAGTGGCTTGTGCGGCCCCGGTTCAGG +
Preference number: 1 (lower is better)
Translates to: QASTAAMRKFSEQRG*LLKVSQWLVRPRFR
Trigger: CCTGAACCGGGGCCGCACAAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR CCA 90 bp CACACCTGCTTGGCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCAGCTTGGAGCCCTGGAGTTGATGCA +
Preference number: 1 (lower is better)
Translates to: HTCLAVGPGSPRRPL*LKRSDSAWSPGVDA
Trigger: TGCATCAACTCCAGGGCTCCAAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGCCAAGCAGGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp GGCTCAGGGGCAGCAAGACCCAGACACTCCCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: GSGAARPRHSQGLGL*KPPRRRKVLPMPAL
Trigger: CAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGCCCCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp TCCTCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTG +
Preference number: 1 (lower is better)
Translates to: SSCTTVRPVRGYMSR*SGEAKAPWEEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp CTTGGGCGTGACCCTGGGCCCCAGGTCATTGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGGCTACAGGAGCTCAAGGAGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LGRDPGPQVIAMTKR*NGQLQRLQELKEAW
Trigger: CCAGGCCTCCTTGAGCTCCTGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCAGGGTCACGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp CTAGAGAGGCTCAGGGGCAGCAAGACCCAGACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCC +
Preference number: 1 (lower is better)
Translates to: LERLRGSKTQTLPRP*AMEASTEEEGTSYA
Trigger: GGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGCCCCTGAGCCTCTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp AGAACAGCCACTTGGGCCTCTGTGTCTCCCTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGA +
Preference number: 1 (lower is better)
Translates to: RTATWASVSPFSPPW*PDPQDELKEVMGHG
Trigger: TCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAAGGGAGACACAGAGGCCCAAGTGGCTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp CTCCCTCTGGAAGAGGCTTGCAGCATTCCAGTCATAGAATGTGGGTaGGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGC +
Preference number: 1 (lower is better)
Translates to: LPLEEACSIPVIECG*ALQRAASHTCLAVG
Trigger: GCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 90 bp TTGTCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCA +
Preference number: 1 (lower is better)
Translates to: LSACPKPHRVPGPSS*TTVRPVRGYMSRWS
Trigger: TGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 90 bp AGGGCTCCCTCTGGAAGAGGCTTGCAGCATTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGT +
Preference number: 1 (lower is better)
Translates to: RAPSGRGLQHSSHRM*VSTTAGSLPHLLGC
Trigger: ACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGGAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp ACAAAGAGGGGCTTGGGCGTGACCCTGGGCCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGCAGCTGCAGAGGCTACAGGAGCTCA +
Preference number: 1 (lower is better)
Translates to: TKRGLGVTLGPRSLQ*QRGEMGSCRGYRSS
Trigger: TGAGCTCCTGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp GTTCAGGAAGTTTGCAGAGGGAAACCTACAAATGGTCCACGGATATaGCTTCCCTGCTCCTGGAGGGCTCCCTCTGGAAGAGGCTTGCAG +
Preference number: 1 (lower is better)
Translates to: VQEVCRGKPTNGPRI*LPCSWRAPSGRGLQ
Trigger: CTGCAAGCCTCTTCCAGAGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTCTGCAAACTTCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp GCCCCTCTGGCTGAAGAGATCAGACTCAGCTTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTTAATGAACACCAAAGCTGGCGGTAC +
Preference number: 1 (lower is better)
Translates to: APLAEEIRLSLEPWS*CSKTMFNEHQSWRY
Trigger: GTACCGCCAGCTTTGGTGTTCATTAAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAGCTGAGTCTGATCTCTTCAGCCAGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 90 bp CCTGCTTCATTTGATAATTTCTCCACGCAAACAAGACATTTAGGCTaGGAAAGAGAACCAGCAAGAATCTGGATGAGCTGGGCACAGCAG +
Preference number: 1 (lower is better)
Translates to: PASFDNFSTQTRHLG*EREPARIWMSWAQQ
Trigger: CTGCTGTGCCCAGCTCATCCAGATTCTTGCTGGTTCTCTTTCTCAGCCTAAATGTCTTGTTTGCGTGGAGAAATTATCAAATGAAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR TCA 90 bp TTTAAAAATCCACATACTTTTCTACCTAACATAGATGTTGTAGGGTaGAGAGCCTATGAGGCTTGTTTGGCACTCCTGCTTCATTTGATA +
Preference number: 1 (lower is better)
Translates to: FKNPHTFLPNIDVVG*RAYEACLALLLHLI
Trigger: TATCAAATGAAGCAGGAGTGCCAAACAAGCCTCATAGGCTCTTCACCCTACAACATCTATGTTAGGTAGAAAAGTATGTGGATTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCCCCTGGCACCTACCTaGGTCTGGCCAGCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLPLAPT*VWPAQG
Trigger: GCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: PCLPHGGFICSLLPEAAASEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: LGRSLRASPGATSSDGNTVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 2 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGC +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQRQGLP*HLPASG
Trigger: GCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCT...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGC +
Preference number: 2 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKRQGLP*HLPASG
Trigger: GCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 2 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR TCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 2 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 2 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CAA 90 bp GCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTaGTTGAAGGTGTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCC +
Preference number: 2 (lower is better)
Translates to: ASTAAMRKFSEQRGW*LKVSQWLVRPRFRS
Trigger: GGACCTGAACCGGGGCCGCACAAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEARRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQALRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 2 (lower is better)
Translates to: LGRSLRASPGATSSDGNTLVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 2 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQARQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: AMEASTEEEGTSYASSGWLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 2 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCCCTGGCACCTACCTaGGTCTGGCCAGCGCAGGGC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLPLAPT*VWPAQG
Trigger: GCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQRTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 2 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 2 (lower is better)
Translates to: GTCLCDPGFHGPRTATWALKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEDSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGCTTCAGGCTCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPSFRLT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGAGCCTGAAGCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569874.2
3UTR-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 2 (lower is better)
Translates to: LGRSLRASPGATSSDGNTTGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR TCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: AMEASTEEEGTSYASSGWSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: WKVARCRGLQVALAGGQQKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 2 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCATGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CAA 90 bp CCTAGAGAGGCTCAGGGGCAGCAAGACCCAGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGC +
Preference number: 2 (lower is better)
Translates to: PREAQGQQDPDTPKA*GYGSLHGGGRYFLC
Trigger: GCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGCCCCTGAGCCTCTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 2 (lower is better)
Translates to: QGGPAKASGSAETQGHVTRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 2 (lower is better)
Translates to: ERLTENPDTWPATAPQEGHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 2 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 2 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 2 (lower is better)
Translates to: QGGPAKASGSAETQGHVTQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQARTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: KVARCRGLQVALAGGQQGTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: AMEASTEEEGTSYASSGWQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTATLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 2 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGLSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCATTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 2 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGECIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 2 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR TCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000564879.2
3UTR-3UTR TCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR TCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 2 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 2 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQATGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 2 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 2 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 2 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLCGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 2 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 2 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCTLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 2 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 2 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 2 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 2 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGTLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 2 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 2 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 2 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 2 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 2 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 2 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR TCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR GCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR TCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAAAAGCTTCAGGCTCTaGAGAAACACAAGGACATGT +
Preference number: 2 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQKSFRL*RNTRTC
Trigger: ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 2 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 2 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQSSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CAA 90 bp TTAACAGCAATGCAACAATGCTTATTTCTTTGTTTTGATATTGACTaGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCTGCA +
Preference number: 2 (lower is better)
Translates to: LTAMQQCLFLCFDID*GEGEGTWKPCTVSA
Trigger: TGCAGAGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAACAAAGAAATAAGCATTGTTGCATTGCTGTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CAA 90 bp GCAATTGTGGGAGGCATTTTGTTTTTAGCAATGAATCACATTACATaGTACCTAACTTCTCAAGCACAATCTGATACTAAGATGATGAAG +
Preference number: 2 (lower is better)
Translates to: AIVGGILFLAMNHIT*YLTSQAQSDTKMMK
Trigger: CTTCATCATCTTAGTATCAGATTGTGCTTGAGAAGTTAGGTACAATGTAATGTGATTCATTGCTAAAAACAAAATGCCTCCCACAATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR TCA 72 bp AGAGGCGGTCAGCGGGGTCTGAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGGCAGCCATCAAGGGTG +
Preference number: 3 (lower is better)
Translates to: RGGQRGLRRRSG*VGRWARQPSRV
Trigger: CACCCTTGATGGCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR CCA 72 bp GCCTCGGCCCACCGCCCCACCACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGTGTCAGGGTCCTGGAA +
Preference number: 3 (lower is better)
Translates to: ASAHRPTTAQSP*HRPSLGVRVLE
Trigger: TTCCAGGACCCTGACACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGTGGTGGGGCGGTGGGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR CCA 72 bp GCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: AAPYSAQRQGLP*HLPASGQRRAQ
Trigger: CTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCTGGGCACTATAGGGGGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: LGRSLRASPGATSSDGNTQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 72 bp AACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCG +
Preference number: 3 (lower is better)
Translates to: NPAYHMGVSSAL*CPRRQPSLGPP
Trigger: CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 72 bp GTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGG +
Preference number: 3 (lower is better)
Translates to: VPQPCLPHGGFI*SLLPEAAAQPR
Trigger: CCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: KVARCRGLQVALAGGQQGQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 72 bp AAGCTTCAGGCTCACATGGGGGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCG +
Preference number: 3 (lower is better)
Translates to: KLQAHMGVSSAL*CPRRQPSLGPP
Trigger: CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGAGCCTGAAGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569874.2
3UTR-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 3 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CAA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 72 bp CCCTGGAAATGGAGCTTGCTGGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGA +
Preference number: 3 (lower is better)
Translates to: PWKWSLLVWVGP*GPLPGLPLQMG
Trigger: TCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 72 bp CCAGCAAAAGCTTCAGGCTCACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGG +
Preference number: 3 (lower is better)
Translates to: PAKASGSHGGFI*SLLPEAAAQPR
Trigger: CCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGAGCCTGAAGCTTTTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569874.2
3UTR-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGETFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTATFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWTFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 3 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 3 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CAA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 3 (lower is better)
Translates to: VAVACAAPVQVPIDVERLNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR TCA 72 bp CCTCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGG +
Preference number: 3 (lower is better)
Translates to: PPAPLCAQSEAT*ADGQGRLKPHG
Trigger: CCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR GCA 72 bp TGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTCAGAGGCTACATGAGC +
Preference number: 3 (lower is better)
Translates to: CPKPHRVPGPSS*TTVRPVRGYMS
Trigger: GCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: AMEASTEEEGTSYASSGWIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CAA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 3 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CAA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 3 (lower is better)
Translates to: WKVARCRGLQVALAGGQQDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 3 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPSFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR TCA 72 bp GCCTGGTGCAGAGAAGCAGTTGGGGCTGCACTGAGATaGGCATGCCACAAAGAGGGGCTTGGGCGTGACCCT +
Preference number: 3 (lower is better)
Translates to: AWCREAVGAALR*ACHKEGLGRDP
Trigger: AGGGTCACGCCCAAGCCCCTCTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCACCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp ACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAGTGGCTTGTGCGGCCC +
Preference number: 3 (lower is better)
Translates to: TAAMRKFSEQRG*LLKVSQWLVRP
Trigger: GGGCCGCACAAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR CCA 72 bp CTCAGGGGCAGCAAGACCCAGACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACT +
Preference number: 3 (lower is better)
Translates to: LRGSKTQTLPRP*AMEASTEEEGT
Trigger: AGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGCCCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp GAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAA +
Preference number: 3 (lower is better)
Translates to: EAKAPWEEQAMV*GWKVARCRGLQ
Trigger: TTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp ACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: TTVRPVRGYMSR*SGEAKAPWEEQ
Trigger: CTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 3 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLRCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCAC +
Preference number: 3 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGDTPKA*GYGSLH
Trigger: GTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGESQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 72 bp GGCTTGGGCGTGACCCTGGGCCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGCAGCTGCAGAGGCTAC +
Preference number: 3 (lower is better)
Translates to: GLGVTLGPRSLQ*QRGEMGSCRGY
Trigger: GTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCAGGGTCACGCCCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 3 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR TCA 72 bp ACTTGGGCCTCTGTGTCTCCCTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAGTTGAAGGAGGTCATG +
Preference number: 3 (lower is better)
Translates to: TWASVSPFSPPW*PDPQDELKEVM
Trigger: CATGACCTCCTTCAACTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAAGGGAGACACAGAGGCCCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp GCAGCAAGACCCAGACACTCCCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATG +
Preference number: 3 (lower is better)
Translates to: AARPRHSQGLGL*KPPRRRKVLPM
Trigger: CATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR-3UTR CAA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR-3UTR CAA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 3 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 72 bp GACCCTGGGCCCCAGGTCATTGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGGCTACAGGAGCTCAAG +
Preference number: 3 (lower is better)
Translates to: DPGPQVIAMTKR*NGQLQRLQELK
Trigger: CTTGAGCTCCTGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCAGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 72 bp ACTGAGATGAGCATGCCACAAAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCATTGCAATGACAAAGAG +
Preference number: 3 (lower is better)
Translates to: TEMSMPQRGAWA*PWAPGHCNDKE
Trigger: CTCTTTGTCATTGCAATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGCATGCTCATCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR TCA 72 bp GAAGAGGCTTGCAGCATTCCAGTCATAGAATGTGGGTaGGCACTACAGCGGGCAGCCTCCCACACCTGCTTG +
Preference number: 3 (lower is better)
Translates to: EEACSIPVIECG*ALQRAASHTCL
Trigger: CAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp TCTGGAAGAGGCTTGCAGCATTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGCAGCCTCCCACACCTG +
Preference number: 3 (lower is better)
Translates to: SGRGLQHSSHRM*VSTTAGSLPHL
Trigger: CAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCACCCACATTCTATGACTGGAATGCTGCAAGCCTCTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp CCCAGTTCAGGAAGTTTGCAGAGGGAAACCTACAAATaGTCCACGGATATGACTTCCCTGCTCCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: PSSGSLQRETYK*STDMTSLLLEG
Trigger: GCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp GTTTGCCTCCAAACTTATTTCTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACACCTCCTTCTGCGTGG +
Preference number: 3 (lower is better)
Translates to: VCLQTYFSHSSL*TGKHHTPPSAW
Trigger: CCACGCAGAAGGAGGTGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGAGAAATAAGTTTGGAGGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 3 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR TCA 72 bp GCTGAAGAGATCAGACTCAGCTTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTTAATGAACACCAAAGC +
Preference number: 3 (lower is better)
Translates to: AEEIRLSLEPWS*CSKTMFNEHQS
Trigger: GCTTTGGTGTTCATTAAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAGCTGAGTCTGATCTCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CCA 72 bp TGTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATaGAAACCCTGTACCGTCTCTGCAACTCTTCTGCAA +
Preference number: 3 (lower is better)
Translates to: CFDIDLGEGEGT*KPCTVSATLLQ
Trigger: TTGCAGAAGAGTTGCAGAGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR GCA 72 bp CCAAATGCCAATGTTTTTGCCAGTTCATGTTGTCCGTaGCTTATCACAAGTGACATGTCTACAGGACACGGT +
Preference number: 3 (lower is better)
Translates to: PNANVFASSCCP*LITSDMSTGHG
Trigger: ACCGTGTCCTGTAGACATGTCACTTGTGATAAGGCACGGACAACATGAACTGGCAAAAACATTGGCATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR TCA 72 bp CCACATACTTTTCTACCTAACATAGATGTTGTAGGGTaGAGAGCCTATGAGGCTTGTTTGGCACTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PHTFLPNIDVVG*RAYEACLALLL
Trigger: AAGCAGGAGTGCCAAACAAGCCTCATAGGCTCTTCACCCTACAACATCTATGTTAGGTAGAAAAGTATGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CCA 72 bp GTCTACAGGACACGGTATCCACTGACTTTGCTTCCTTaGTCCCAAGAAAAGGTGTTGACAAATTCCATAGTT +
Preference number: 3 (lower is better)
Translates to: VYRTRYPLTLLP*SQEKVLTNSIV
Trigger: AACTATGGAATTTGTCAACACCTTTTCTTGGGACCAAGGAAGCAAAGTCAGTGGATACCGTGTCCTGTAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR GCA 72 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATaGCAATGTTTTTGCCAGTTCATGTTGTCCGTGCCT +
Preference number: 3 (lower is better)
Translates to: SLLSLAHKHLTK*QCFCQFMLSVP
Trigger: AGGCACGGACAACATGAACTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CCA 72 bp TGCAACAATGCTTATTTCTTTGTTTTGATATTGACTTaGGGGAAGGTGAGGGTACATGGAAACCCTGTACCG +
Preference number: 3 (lower is better)
Translates to: CNNAYFFVLILT*GKVRVHGNPVP
Trigger: CGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAACAAAGAAATAAGCATTGTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CCA 72 bp AAATATAAACTACTCAAGGAGACTGCAAAGGCTTTATaGGTTCAGAAAGTGGATAAGAGAAATATGAAGGCC +
Preference number: 3 (lower is better)
Translates to: KYKLLKETAKAL*VQKVDKRNMKA
Trigger: GGCCTTCATATTTCTCTTATCCACTTTCTGAACCCATAAAGCCTTTGCAGTCTCCTTGAGTAGTTTATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGGCACAGGAGGATCTTaGGCACGGCCCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPGTGGS*ARPPRR
Trigger: GCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGCGGGGCAATCTCGGCTaGGCGCGGTTGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRRGNLG*ARLLTP
Trigger: AGGCGTGAGCAACCGCGCCCAGCCGAGATTGCCCCG...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRRAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGGCAGGAGAATGGCGTaGATCCGGGAGGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPGRRMA*IREAGL
Trigger: AAGCCCCGCCTCCCGGATTCACGCCATTCTCCTGCC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPDSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCGGGGCAATCTCGGCTaGGCGCGGTTGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGRGNLG*ARLLTP
Trigger: AGGCGTGAGCAACCGCGCCCAGCCGAGATTGCCCCG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACGCTGGCGTCAGGCGTaGCCGTGCGGCAGGGAATGT +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQRWRQA*PCGREC
Trigger: ACATTCCCTGCCGCACGGTCACGCCTGACGCCAGCG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSCRGH*RPGCGR
Trigger: CCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLSDSSG*PALTLW
Trigger: CCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCTGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGCTTTCTCCTCAGCCTaGCGCGCCGGCCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLAFSSA*RAGLSA
Trigger: CGCAGAAAGGCCGGCGCGGCAGGCTGAGGAGAAAGC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000630263.2
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGCCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAARAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGGCAGGAGAATGGCGTaGATCCGGGAGGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQGRRMA*IREAGL
Trigger: AAGCCCCGCCTCCCGGATTCACGCCATTCTCCTGCC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGCATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRHCRPG*GRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATG...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLGRSAS*RGHCRP
Trigger: TGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSDSSG*PALTLW
Trigger: CCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCATCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSSDSSG*PALTLW
Trigger: CCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGA...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCTGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGCAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCCCTGGCACCTACCTaGGTCTGGCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCPLAPT*VWPAQG
Trigger: GCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGG...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPPGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGCTTTCTCCTCAGCCTaGCGCGCCGGCCTTTCTGCG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLAFSSA*RAGLSA
Trigger: CGCAGAAAGGCCGGCGCGGCAGGCTGAGGAGAAAGC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000630263.2
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTTGGGCCCCAGGTCCTaGATGGCAGCGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSLGPRS*MAASIL
Trigger: CAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGAGATGTCGGGGAACTaGTTGGCCAGGCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSEMSGN*LARHRR
Trigger: CCTCCTGTGCCTGGCCAACCAGTTCCCCGACATCTC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAARQGLP*HLPASG
Trigger: GCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCT...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLDSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPCGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSEDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGCACAGGAGGATCTTaGGCACGGCCCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRGTGGS*ARPPRR
Trigger: GCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGCACAGGAGGATCTTaGGCACGGCCCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAGTGGS*ARPPRR
Trigger: GCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPSCRGH*RPGCGR
Trigger: CCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTGRSAS*RGHCRP
Trigger: TGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPRTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGCGAGCTGTCGCCCTGTaGCCACCCCGGAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVRAVAL*PPRRAR
Trigger: GCGGGCTCTCCGGGGTGGGCACAGGGCGACAGCTCG...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567020.6
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCTCGGGAGGAGGCCCTaGACTGCCGGAAGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRLGRRP*TAGRGG
Trigger: TCCTCCCCTTCCGGCAGTCCAGGGCCTCCTCCCGAG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCCCCAGGTCCTGGATaGCAGCGTCCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPAPGPG*QRPSCL
Trigger: AAGACAAGATGGACGCTGCCATCCAGGACCTGGGGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCTCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLSRIRR*YTFPRR
Trigger: CCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGA...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQSRIRR*YTFPRR
Trigger: CCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCATTCAGGCAGTAGCTaGGCACCTGCGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPHSGSS*APACCP
Trigger: TGGACAACACGCAGGTGCCCAGCTACTGCCTGAATG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTGTCGGGGAACTGGTTaGCCAGGCACAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPCRGTG*PGTGGS
Trigger: AGATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSSLWAA*QYLFTR
Trigger: CCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCT...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCGCCACCATCAGCTTGTaGGCCGCCTGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLATISL*AAWQYL
Trigger: CAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGC...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTCCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSPALTL*KNLRMA
Trigger: GGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGG...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSAICRS*ISLREK
Trigger: CTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWASEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLREQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCGGGGCAATCTCGGCTaGGCGCGGTTGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCRGNLG*ARLLTP
Trigger: AGGCGTGAGCAACCGCGCCCAGCCGAGATTGCCCCG...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGTCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRSSRCL*RTCGCP
Trigger: AGGACATCCGCACGTTCGTCAGAGACATCGCGAAGA...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSSPSR*RSPSGS
Trigger: ACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTARGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGCACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWARAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGTTCCTGCAGTTCAGTaGAGCTCAGCTCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLVPAVQ*SSAPWA
Trigger: GGCCCAAGGAGCTGAGCTGCACTGAACTGCAGGAAC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCTTGCCCACGATCTTaGCCACGATGTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPACPRS*PRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCT +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPAAGSC*CACPRS
Trigger: AGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGPLAA*IQAVAG
Trigger: CCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASGPLAA*IQAVAG
Trigger: CCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCC...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGPLAA*IQAVAG
Trigger: CCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGGCACAGGAGGATCTTaGGCACGGCCCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGGTGGS*ARPPRR
Trigger: GCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCACTCGGCCTCGTCGATaGTGTAGTGCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLTRPRR*CSAAAG
Trigger: CCCTGCTGCTGCACTACAGCATCGACGAGGCCGAGT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCACTCGGCCTCGTCGATaGTGTAGTGCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAATRPRR*CSAAAG
Trigger: CCCTGCTGCTGCACTACAGCATCGACGAGGCCGAGT...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRSCRGH*RPGCGR
Trigger: CCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGA...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPGPQTS*RTTQRP
Trigger: TGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQASDSSG*PALTLW
Trigger: CCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLNVRMS*FTLSDS
Trigger: GGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTT...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLREDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCCCCTGGCACCTACCTaGGTCTGGCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGPLAPT*VWPAQG
Trigger: GCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGRTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCCTGCAAACCTGTCTaGCATCTCACACCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSCKPV*HLTPSA
Trigger: CGCGGAGGGTGTGAGATGGCAGACAGGTTTGCAGGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTTGGGCCCCAGGTCCTaGATGGCAGCGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLLGPRS*MAASIL
Trigger: CAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSRIRR*YTFPRR
Trigger: CCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGAGATGTCGGGGAACTaGTTGGCCAGGCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQEMSGN*LARHRR
Trigger: CCTCCTGTGCCTGGCCAACCAGTTCCCCGACATCTC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLKARKL*SISLLP
Trigger: CGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGPALTL*KNLRMA
Trigger: GGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPTGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCRQGLP*HLPASG
Trigger: GCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCT...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAACGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGCCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLPRRPL*LKRSDS
Trigger: TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGG...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQPRRPL*LKRSDS
Trigger: TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPSSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCCCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPPCGRT*GWPAPR
Trigger: GCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGG...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLSSPSR*RSPSGS
Trigger: ACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGTCTGGGTCGGTCCCTaGGGGCCTCTCCCGGGGCTA +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTVWVGP*GPLPGL
Trigger: TAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAGAC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGAGAGGGGCTTGGGCGTaGCCCTGGGCCCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVRGAWA*PWAPGH
Trigger: ATGACCTGGGGCCCAGGGTCACGCCCAAGCCCCTCT...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLLSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCAGCTGGCGGTACAGATaGGGGCCTCAGGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASSWRYR*GPQGLR
Trigger: CCTGAGCCCCTGAGGCCCTCATCTGTACCGCCAGCT...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGGAGGCCCCTCTGGCTaGAGAGATCAGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTGGPSG*RDQTQL
Trigger: AAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGCAGGAGAATGGCGTaGATCCGGGAGGCGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGRRMA*IREAGL
Trigger: AAGCCCCGCCTCCCGGATTCACGCCATTCTCCTGCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRSIAPL*SGGGPG
Trigger: TCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCT +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRAAGSC*CACPRS
Trigger: AGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGGPLAA*IQAVAG
Trigger: CCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGHCRPG*GRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWSCRGH*RPGCGR
Trigger: CCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVSCRGH*RPGCGR
Trigger: CCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGA...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGTCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVSDSSG*PALTLW
Trigger: CCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGA...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTNVRMS*FTLSDS
Trigger: GGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGCGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRRCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGCCAAGTGTACAAACTaGCTCTTCTGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPAKCTN*LFCFTV
Trigger: CACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGAGATGTCGGGGAACTaGTTGGCCAGGCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKEMSGN*LARHRR
Trigger: CCTCCTGTGCCTGGCCAACCAGTTCCCCGACATCTC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQPALTL*KNLRMA
Trigger: GGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTPALTL*KNLRMA
Trigger: GGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGGGAGAAGAGGCGGATaGCGAACGCTTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQGRRGG*RTLSPA
Trigger: TGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTAICRS*ISLREK
Trigger: CTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGGCGGAGTGGCTGAGTaGGGCGGTGGGCTCGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLGGVAE*GGGLGS
Trigger: GCTGCCGAGCCCACCGCCCCACTCAGCCACTCCGCC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGTCTGAGGAGGCGGAGTaGCTGAGTGGGGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVSEEAE*LSGAVG
Trigger: GCCCACCGCCCCACTCAGCCACTCCGCCTCCTCAGA...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTSEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCGCCAGGCTTGGCCATaGGGTCCTGCCGTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGRQAWP*GPAVPQ
Trigger: TTGGGGGACGGCAGGACCCCATGGCCAAGCCTGGCG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCTGGAGGGCTCCCTCTaGAAGAGGCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLLEGSL*KRLAAF
Trigger: GAATGCTGCAAGCCTCTTCCAGAGGGAGCCCTCCAG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGCTCCAGCCCCCTTTCTaGGGGTTTCCTGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKLQPPF*GFPANL
Trigger: CAGGTTTGCAGGAAACCCTCAGAAAGGGGGCTGGAG...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTSSRCL*RTCGCP
Trigger: AGGACATCCGCACGTTCGTCAGAGACATCGCGAAGA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAGGAGGCGGAGTGGCTaGGTGGGGCGGTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGRRRSG*VGRWAR
Trigger: CCGAGCCCACCGCCCCACTCAGCCACTCCGCCTCCT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTTLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAATLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCCCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAGGCCCCTCTGGCTaGAGAGATCAGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQGGPSG*RDQTQL
Trigger: AAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGAGGAGGCCCTGGACTaGCGGAAGGGGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGEEALD*RKGRTE
Trigger: CTCTGTCCTCCCCTTCCGGCAGTCCAGGGCCTCCTC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWARQLLL*LPTILP
Trigger: GGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCT...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCT +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAAGSC*CACPRS
Trigger: AGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCT +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRAAGSC*CACPRS
Trigger: AGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGGCACAGGAGGATCTTaGGCACGGCCCCCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHGTGGS*ARPPRR
Trigger: GCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGRSAS*RGHCRP
Trigger: TGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTGPQTS*RTTQRP
Trigger: TGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKNVRMS*FTLSDS
Trigger: GGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQLVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGLVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCCCCTGGCACCTACCTaGGTCTGGCCAGCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPPLAPT*VWPAQG
Trigger: GCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGACAAACTGCCTCTTCTaGTTCACGGTGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRTNCLF*FTVMPF
Trigger: GAAGGGCATCACCGTGAAGCAGAAGAGGCAGTTTGT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGCCCCAGGTCCTGGATaGCAGCGTCCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQAPGPG*QRPSCL
Trigger: AAGACAAGATGGACGCTGCCATCCAGGACCTGGGGC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGAGATGTCGGGGAACTaGTTGGCCAGGCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGEMSGN*LARHRR
Trigger: CCTCCTGTGCCTGGCCAACCAGTTCCCCGACATCTC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGKARKL*SISLLP
Trigger: CGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTT...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGCCACCATCAGCTTGTaGGCCGCCTGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAATISL*AAWQYL
Trigger: CAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKSEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTGGGTGTCAGGGTCCTaGAAGCCCCAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWWVSGS*KPQAST
Trigger: CGTGGAGGCCTGGGGCTTCCAGGACCCTGACACCCA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKTAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AAGCCCCAGGCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KPQASTAAMRKFSEQRGWSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...CCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGCCTGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTADSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGCAGGGGACTCCAAGTaGCACTGGCTGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGAGDSK*HWLEAS
Trigger: GCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWACGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSREDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRPRRPL*LKRSDS
Trigger: TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACTCGGGAGGAGGCCCTaGACTTTCCACCTGGGATGG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQALGRRP*TFHLGW
Trigger: CCATCCCAGGTGGAAAGTCCAGGGCCTCCTCCCGAG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
3UTR CAA 72 bp GCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTaGTTGAAGGTGTCGCAGTGGCTTGTGCGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AAMRKFSEQRGW*LKVSQWLVRPR
Trigger: CCGGGGCCGCACAAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
3UTR CAA 72 bp GCTCAGGGGCAGCAAGACCCAGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTAC +
Preference number: 4 (lower is better)
Translates to: AQGQQDPDTPKA*GYGSLHGGGRY
Trigger: GTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTCTGGGTCTTGCTGCCCCTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKPCGRT*GWPAPR
Trigger: GCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCATCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSSSRCL*RTCGCP
Trigger: AGGACATCCGCACGTTCGTCAGAGACATCGCGAAGA...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQASARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGCGGTCAGCGGGGTCTaGGGAGGCGGAGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQAVSGV*GGGVAE
Trigger: CTCAGCCACTCCGCCTCCTCAGACCCCGCTGACCGC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGRGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACAGTTGGGGCTGCACTaGGATGAGCATGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSQLGLH*DEHATK
Trigger: CTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGCAGTTGGGGCTGCACTaGGATGAGCATGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKQLGLH*DEHATK
Trigger: CTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTG...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACAGTTGGGGCTGCACTaGGATGAGCATGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGQLGLH*DEHATK
Trigger: CTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGTLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRLSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMSIAPL*SGGGPG
Trigger: TCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERQLLL*LPTILP
Trigger: GGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRQLLL*LPTILP
Trigger: GGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEHCRPG*GRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDGRSAS*RGHCRP
Trigger: TGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQGPQTS*RTTQRP
Trigger: TGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACC...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPRAEVL*MDGQVY
Trigger: GTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCG...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTARPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAARSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGPGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTCCTGCAAACCTGTCTaGCATCTCACACCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGSCKPV*HLTPSA
Trigger: CGCGGAGGGTGTGAGATGGCAGACAGGTTTGCAGGA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTTGGGCCCCAGGTCCTaGATGGCAGCGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGELGPRS*MAASIL
Trigger: CAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTTGGGCCCCAGGTCCTaGATGGCAGCGTCCATCTTG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRLGPRS*MAASIL
Trigger: CAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACATTCAGGCAGTAGCTaGGCACCTGCGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGHSGSS*APACCP
Trigger: TGGACAACACGCAGGTGCCCAGCTACTGCCTGAATG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCTGTCGGGGAACTGGTTaGCCAGGCACAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRCRGTG*PGTGGS
Trigger: AGATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACA...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAKARKL*SISLLP
Trigger: CGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGCCACCATCAGCTTGTaGGCCGCCTGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAATISL*AAWQYL
Trigger: CAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGCCACCATCAGCTTGTaGGCCGCCTGGCAGTACTTG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAATISL*AAWQYL
Trigger: CAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAAICRS*ISLREK
Trigger: CTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATCAGGGCTTTCTCATTaGCCATCTGCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQSGLSH*PSAGAG
Trigger: TCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAAC +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGRKFSA*TAKCTN
Trigger: GTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTANSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQTGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGCACCCTCCCTGGGGGTaGAGCCCAGCACAAATCCCA +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVHPPWG*SPAQIP
Trigger: TGGGATTTGTGCTGGGCTCCACCCCCAGGGAGGGTG...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWALWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGDSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGACTCCAAGTGGCACTaGCTGGAGGCCAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWDSKWH*LEASRD
Trigger: GTCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTC...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWCGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVCGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAEDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCTGGAGGGCTCCCTCTaGAAGAGGCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGLEGSL*KRLAAF
Trigger: GAATGCTGCAAGCCTCTTCCAGAGGGAGCCCTCCAG...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCCTGGTCCAGATCACTaGAAGGCCCGGGTGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPPGPDH*KARVGP
Trigger: GGGCCCCACCCGGGCCTTCCAGTGATCTGGACCAGG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGAACCAGCAAGAATCTaGATGAGCTGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTEPARI*MSWAQQ
Trigger: CTGCTGTGCCCAGCTCATCCAGATTCTTGCTGGTTC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGTGCTTCAGCAGGTTTTaGTTGAGTGACCAGACCACT +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRCFSRF*LSDQTT
Trigger: AGTGGTCTGGTCACTCAACCAAAACCTGCTGAAGCA...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR CCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCACACCCTTTCCACCTaGGATGGTAGAAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAHTLST*DGRSSQ
Trigger: CTGGGAACTTCTACCATCCCAGGTGGAAAGGGTGTG...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627285.1
3UTR CAA 72 bp GCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: AMRKFSEQRGWL*KVSQWLVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCATTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACTCCAGCCCCCTTTCTaGGGGTTTCCTGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQALQPPF*GFPANL
Trigger: CAGGTTTGCAGGAAACCCTCAGAAAGGGGGCTGGAG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR TCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGPCGRT*GWPAPR
Trigger: GCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAGAGGGGCTGGTTGTTaGAGGTGTCGCAGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTARGAGC*RCRSGL
Trigger: CAAGCCACTGCGACACCTTCAACAACCAGCCCCTCT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCCACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGELSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLRAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCRAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGGAGGCCCCTCTGGCTaGAGAGATCAGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWGGPSG*RDQTQL
Trigger: AAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACAGGTTTTGGTTGAGTaGCCAGACCACTCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGQVLVE*PDHSGF
Trigger: GAAACCGGAGTGGTCTGGTCACTCAACCAAAACCTG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHSIAPL*SGGGPG
Trigger: TCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGTTCCTGCAGTTCAGTaGAGCTCAGCTCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKVPAVQ*SSAPWA
Trigger: GGCCCAAGGAGCTGAGCTGCACTGAACTGCAGGAAC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGCTTGCCCACGATCTTaGCCACGATGTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRACPRS*PRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTASCCCA*PRSCPR
Trigger: TCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFRQLLL*LPTILP
Trigger: GGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCT...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGRQLLL*LPTILP
Trigger: GGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCT...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQGPLAA*IQAVAG
Trigger: CCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGHCRPG*GRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAGPQTS*RTTQRP
Trigger: TGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSRCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAGCCCCAGGCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGCGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: KPQASTAAMRKFSEQRGWRCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...CCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGCCTGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGELVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEASSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTCCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTCCTGCAAACCTGTCTaGCATCTCACACCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKSCKPV*HLTPSA
Trigger: CGCGGAGGGTGTGAGATGGCAGACAGGTTTGCAGGA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGAAGGGGAGGACAGAGTaGCTAAATCCTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWKGRTE*LNPPAP
Trigger: GGGGGCTGGAGGATTTAGCCACTCTGTCCTCCCCTT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAAGGGGAGGACAGAGTaGCTAAATCCTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKKGRTE*LNPPAP
Trigger: GGGGGCTGGAGGATTTAGCCACTCTGTCCTCCCCTT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGCCCCAGGTCCTGGATaGCAGCGTCCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKAPGPG*QRPSCL
Trigger: AAGACAAGATGGACGCTGCCATCCAGGACCTGGGGC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGESLWAA*QYLFTR
Trigger: CCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGCCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRPALTL*KNLRMA
Trigger: GGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGG...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGGAGAAGAGGCGGATaGCGAACGCTTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGRRGG*RTLSPA
Trigger: TGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASAICRS*ISLREK
Trigger: CTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGC...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATCAGGGCTTTCTCATTaGCCATCTGCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSGLSH*PSAGAG
Trigger: TCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGESEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVSEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAGGCAACGCCAGGCTTaGCCATGGGGTCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLRQRQA*PWGPAV
Trigger: GACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGETLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACAGGCAAGGCCTCCCCTaGCACCTACCTGCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHRQGLP*HLPASG
Trigger: GCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSREAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWEDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGCCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVPRRPL*LKRSDS
Trigger: TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGG...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCCTGGAGGGCTCCCTCTaGAAGAGGCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASLEGSL*KRLAAF
Trigger: GAATGCTGCAAGCCTCTTCCAGAGGGAGCCCTCCAG...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCTGGAGGGCTCCCTCTaGAAGAGGCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVLEGSL*KRLAAF
Trigger: GAATGCTGCAAGCCTCTTCCAGAGGGAGCCCTCCAG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCGAACCAGCAAGAATCTaGATGAGCTGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPEPARI*MSWAQQ
Trigger: CTGCTGTGCCCAGCTCATCCAGATTCTTGCTGGTTC...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQASSRCL*RTCGCP
Trigger: AGGACATCCGCACGTTCGTCAGAGACATCGCGAAGA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCT +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRSSRCL*RTCGCP
Trigger: AGGACATCCGCACGTTCGTCAGAGACATCGCGAAGA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCTCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFSSPSR*RSPSGS
Trigger: ACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGA...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTTCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEACGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAGGGCTGCGGTGGGCTaGGATGAGTGGCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGRAAVG*DEWRLP
Trigger: GGGAAGTCGCCACTCATCTCAGCCCACCGCAGCCCT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQSIAPL*SGGGPG
Trigger: TCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGTTCCTGCAGTTCAGTaGAGCTCAGCTCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDVPAVQ*SSAPWA
Trigger: GGCCCAAGGAGCTGAGCTGCACTGAACTGCAGGAAC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGCTTGCCCACGATCTTaGCCACGATGTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAACPRS*PRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGSCCCA*PRSCPR
Trigger: TCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVSCCCA*PRSCPR
Trigger: TCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCGRSAS*RGHCRP
Trigger: TGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTTCTCATTGGCCATCTaGAGGAGCTGGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPFSLAI*RSWISL
Trigger: CAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTTCTCATTGGCCATCTaGAGGAGCTGGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQFSLAI*RSWISL
Trigger: CAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSTVMPF*FRAFSL
Trigger: CAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERAEVL*MDGQVY
Trigger: GTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCG...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVRAEVL*MDGQVY
Trigger: GTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGLVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGATTGGTCAGCTCGGGGTaGTTGATCACCACCCACTCG +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGLVSSG*LITTHS
Trigger: CGAGTGGGTGGTGATCAAGCACCCCGAGCTGACCAA...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATGTCGCAGTGGCTTGTaGGGCCCCGGTTCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQCRSGL*GPGSGP
Trigger: GGGACCTGAACCGGGGCCGCACAAGCCACTGCGACA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACATCATCTGCTCTCTGCTaGCCGAGGCGGCAGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTSSALC*PRRQPS
Trigger: GCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGA...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGGAAGGTACTTCCTATaGCAGCTCTGGGTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDGRYFL*QLWVGL
Trigger: CAGCCCCACCCAGAGCTGGCATAGGAAGTACCTTCC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACTCAGGAGGGCGCGATaGTATGCGGCACCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTLRRAR*YAAPAG
Trigger: CCCTGCTGGTGCCGCATAGCATCGCGCCCTCCTGAG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTCGCAGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VAVACAAPVQVPIDVERLWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...CAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACTGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAGGTGGCCAAGGAGGTaGTGTGTGGCCAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGRWPRR*CVARAR
Trigger: CCTGGCCCTGGCCACACAGCACCTCCTTGGCCACCT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVRTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGTGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACCCGGTCCTTCCTCCTaGACCACTGTGCGCCCAGTC +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQPGPSS*TTVRPV
Trigger: GACTGGGCGCACAGTGGTGCAGGAGGAAGGACCGGG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCAGCCTCCCACACCTaGTTGGCTGTAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLAASHT*LAVGPG
Trigger: TCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCCAGTTCAGGAAGTTTaGAGAGGGAAACCTACAAAT +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPPVQEV*RGKPTN
Trigger: ATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGCCAGGAGGCGGAGGTTaGAGTGAGCCAAGATCATGC +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVPGGGG*SEPRSC
Trigger: GCATGATCTTGGCTCACTGCAACCTCCGCCTCCTGG...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCEAVVS*RVHSAA
Trigger: AGCGGCGCTATGGACTCTCCAGGATACAACTGCTTC...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCTCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLSRIRR*YTFPRR
Trigger: CCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGA...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCATTCAGGCAGTAGCTaGGCACCTGCGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKHSGSS*APACCP
Trigger: TGGACAACACGCAGGTGCCCAGCTACTGCCTGAATG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTKARKL*SISLLP
Trigger: CGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTT...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGGGAGAAGAGGCGGATaGCGAACGCTTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFGRRGG*RTLSPA
Trigger: TGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGGGAGAAGAGGCGGATaGCGAACGCTTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGGRRGG*RTLSPA
Trigger: TGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAAC +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQRKFSA*TAKCTN
Trigger: GTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAAC +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSRKFSA*TAKCTN
Trigger: GTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWTGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGETGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGACTGGAAGTAGAACCTaGCCAGGCTGTACCCGTGCT +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVTGSRT*PGCTRA
Trigger: AGCACGGGTACAGCCTGGCCAGGTTCTACTTCCAGT...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCATCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGGCAGCCATCAAGGGTaGGGGCTTGGTCAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGGSHQG*GLGQLG
Trigger: CCCGAGCTGACCAAGCCCCCACCCTTGATGGCTGCC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGSEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTCGGAGCAGAGGGGCTaGTTGTTGAAGGTGTCGCAG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGSEQRG*LLKVSQ
Trigger: CTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTACGGCTCAGTCACCGTaGCACAGGCCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEATAQSP*HRPSLG
Trigger: ACCCAGTGACGGCCTGTGCCACGGTGACTGAGCCGT...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGTLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGTLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGCCTGGGGAGGGAACTaGGGCAAACGCCCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGAWGGN*GKRPGQ
Trigger: CTGTCCTGGGCGTTTGCCCCAGTTCCCTCCCCAGGC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGAAATGGAGCTTGCTaGTCTGGGTCGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVGNGAC*SGSVPE
Trigger: CTCAGGGACCGACCCAGACCAGCAAGCTCCATTTCC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGGAGGGCACGGGGCCTaGTGCAGAGAAGCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGGGHGA*CREAVG
Trigger: CCCAACTGCTTCTCTGCACCAGGCCCCGTGCCCTCC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGGAGGTCATGGGGCATaGAGGGAGGTCACAAGGCAG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTGGHGA*REVTRQ
Trigger: CTGCCTTGTGACCTCCCTCCATGCCCCATGACCTCC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTGTGGGGATGGAAAGTaGCACGGTGCAGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMCGDGK*HGAGDS
Trigger: GGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGAGGCTAAAGCCCCATaGGAGGAGCAGGCAATGGTG +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVEAKAP*EEQAMV
Trigger: CACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGCAGGGCATGGGGACTaGCCCCATTTCACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHAGHGD*PHFTAG
Trigger: CCCAGCTGTGAAATGGGGCCAGTCCCCATGCCCTGC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCCCTGGAGGGCTGCGGTaGGCTGAGATGAGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGPGGLR*AEMSGD
Trigger: GTCGCCACTCATCTCAGCCCACCGCAGCCCTCCAGG...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGSSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGAGAATCTGGATGAGCTaGGCACAGCAGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWRIWMS*AQQLTP
Trigger: AGGCGTGAGCTGCTGTGCCCAGCTCATCCAGATTCT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAAGCTTCAGGCTCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGSFRLT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGAGCCTGAAGCT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569874.2
CDS-3UTR TCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTTCAGCTCGGGGTGCTTaGTCACCACCCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLSARGA*SPPTRS
Trigger: GCTACGAGTGGGTGGTGATCAAGCACCCCGAGCTGA...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATCTTGGAGGGCAGGTTaGAGTGGCGAGCGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQSWRAG*SGERPG
Trigger: TCCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCTCACAGAAAACCCTaGCACGTGGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLAHRKP*HVASHS
Trigger: GCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCCCAAAGGCTGTAAGGTaGGAGGCTCACAGAAAACCC +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASPKAVR*EAHRKP
Trigger: GGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGG...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGTLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVTLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGCACAGCTGGGGAAACTaGGTTCCAGACGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVHSWGN*VPDGFV
Trigger: GACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTG...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTGCGGTGGGCTGAGATaGGTGGCGACTTCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGCGGLR*VATSLP
Trigger: TGGGAGGGAAGTCGCCACTCATCTCAGCCCACCGCA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTCAGCAGGTTTTGGTTaGGTGACCAGACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDSAGFG*VTRPLR
Trigger: CCGGAGTGGTCTGGTCACTCAACCAAAACCTGCTGA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTCAGCAGGTTTTGGTTaGGTGACCAGACCACTCCGG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGSAGFG*VTRPLR
Trigger: CCGGAGTGGTCTGGTCACTCAACCAAAACCTGCTGA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCTTGCCCACGATCTTaGCCACGATGTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFACPRS*PRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQAAGSC*CACPRS
Trigger: AGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTACTCGGCCTCGTCGATaGTGTAGTGCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPTRPRR*CSAAAG
Trigger: CCCTGCTGCTGCACTACAGCATCGACGAGGCCGAGT...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACCATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGC +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHHCRPG*GRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATG...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGGPQTS*RTTQRP
Trigger: TGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGRAEVL*MDGQVY
Trigger: GTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTAC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFRAEVL*MDGQVY
Trigger: GTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCG...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGCCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCCCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCCGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASRCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCACGCTGCACCTCAGGCTaGAGCCTAAACACAAAGCAT +
Preference number: 4 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTARCTSG*SLNTKH
Trigger: ATGCTTTGTGTTTAGGCTGCAGCCTGAGGTGCAGCG...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGCTGCACGTTCCCACTaGCGTTGTACTCCCACCCCA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHAARSH*RCTPTP
Trigger: TGGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGGGCAGGCCCAAGGGTaGCAGTCTGTTCTCGGGATC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTGQAQG*QSVLGI
Trigger: GATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGGAGGACATGCATCCATaGAAGGTGGCCAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWEDMHP*KVAKEV
Trigger: CACCTCCTTGGCCACCTTGCATGGATGCATGTCCTC...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCCCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGAAGGGGAGGACAGAGTaGCTAAATCCTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMKGRTE*LNPPAP
Trigger: GGGGGCTGGAGGATTTAGCCACTCTGTCCTCCCCTT...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKEAVVS*RVHSAA
Trigger: AGCGGCGCTATGGACTCTCCAGGATACAACTGCTTC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCATTCAGGCAGTAGCTaGGCACCTGCGTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGHSGSS*APACCP
Trigger: TGGACAACACGCAGGTGCCCAGCTACTGCCTGAATG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATGTCGGGGAACTGGTTaGCCAGGCACAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTCRGTG*PGTGGS
Trigger: AGATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGAGATGTCGGGGAACTaGTTGGCCAGGCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCEMSGN*LARHRR
Trigger: CCTCCTGTGCCTGGCCAACCAGTTCCCCGACATCTC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMAICRS*ISLREK
Trigger: CTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTCAGGGCTTTCTCATTaGCCATCTGCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKSGLSH*PSAGAG
Trigger: TCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTCAGGGCTTTCTCATTaGCCATCTGCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWSGLSH*PSAGAG
Trigger: TCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGGCTACCTCTTCAGATaGGAACACGCAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLGYLFR*EHAGRP
Trigger: GGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGAGCAGGCAATGGTGTaGGGATGGAAAGTGGCACGG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTEQAMV*GWKVAR
Trigger: CCGTGCCACTTTCCATCCCCACACCATTGCCTGCTC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLEDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCCCGGAGGCCCCTCTaGCTGAAGAGATCAGACTCA +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLPRRPL*LKRSDS
Trigger: TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACTGCAAAGGCTTTATaGGTTCAGAAAGTGGATAAG +
Preference number: 4 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPTAKAL*VQKVDK
Trigger: CTTATCCACTTTCTGAACCCATAAAGCCTTTGCAGT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGAGAATCTGGATGAGCTaGGCACAGCAGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWRIWMS*AQQLTP
Trigger: AGGCGTGAGCTGCTGTGCCCAGCTCATCCAGATTCT...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCTCCAGCCCCCTTTCTaGGGGTTTCCTGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPLQPPF*GFPANL
Trigger: CAGGTTTGCAGGAAACCCTCAGAAAGGGGGCTGGAG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTCCTCCACGGCAGCAATaGGGAAGTTCTCGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAPPRQQ*GSSRSR
Trigger: TCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGG...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGGCAATGACAAAGAGGTaGAATGGGCAGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGAMTKR*NGQLQR
Trigger: CCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGC...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATTCTCCCCTCCGTGGTaGCCAGACCCTCAAGACGAG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQFSPPW*PDPQDE
Trigger: CTCGTCTTGAGGGTCTGGTCACCACGGAGGGGAGAA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACCATACCTCTCCCCGTaGGAGGGATTCACCCCATCC +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQPYLSP*EGFTPS
Trigger: GGATGGGGTGAATCCCTCTCACGGGGAGAGGTATGG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGTGGATAAGAGAAATATaGAGGCCTCTGAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: RGKASPGTYLRLASAGLRWIREI*RPLKSS
Trigger: TGAAGATTTCAGAGGCCTTCATATTTCTCTTATCCA...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCACAAGACATTTAGGCTaGGAAAGAGAACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLTRHLG*EREPAR
Trigger: TCTTGCTGGTTCTCTTTCTCAGCCTAAATGTCTTGT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCAGGTTTTGGTTGAGTaGCCAGACCACTCCGGTTTC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWQVLVE*PDHSGF
Trigger: GAAACCGGAGTGGTCTGGTCACTCAACCAAAACCTG...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEASCCCA*PRSCPR
Trigger: TCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCT...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLSCCCA*PRSCPR
Trigger: TCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCT...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAACTCGGCCTCGTCGATaGTGTAGTGCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQTRPRR*CSAAAG
Trigger: CCCTGCTGCTGCACTACAGCATCGACGAGGCCGAGT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAACTCGGCCTCGTCGATaGTGTAGTGCAGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTTRPRR*CSAAAG
Trigger: CCCTGCTGCTGCACTACAGCATCGACGAGGCCGAGT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEANVRMS*FTLSDS
Trigger: GGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTT...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLNVRMS*FTLSDS
Trigger: GGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTTCTCATTGGCCATCTaGAGGAGCTGGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEFSLAI*RSWISL
Trigger: CAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCAGGCTGCAGGGCCCTaGTCAGGAGGGCGCGATGCT +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSQAAGP*SGGRDA
Trigger: AGCATCGCGCCCTCCTGAGCAGGGCCCTGCAGCCTG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTGGAAATGGAGCTTaGTGGTCTGGGTCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLPGNGA*WSGSVP
Trigger: AGGGACCGACCCAGACCAGCAAGCTCCATTTCCAGG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCTCTCACTCCAGTGGGCACGGGGCCTGGTaGAGAGAAGCAGTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LRSQRSPVCLQTYFSHSSGHGAW*REAVGA
Trigger: AGCCCCAACTGCTTCTCTGCACCAGGCCCCGTGCCC...ACTGGAGTGAGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTAGGACTGCTGGTACCTaGCTCTGTGACCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPRTAGT*LCDPGF
Trigger: GAAGCCTGGGTCACAGAGGCAGGTACCAGCAGTCCT...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAAGCATTTGACCAAATaGCAATGTTTTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSKHLTK*QCFCQF
Trigger: GAACTGGCAAAAACATTGGCATTTGGTCAAATGCTT...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGCCAAGTGTACAAACTaGCTCTTCTGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKAKCTN*LFCFTV
Trigger: CACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
CDS-3UTR GCA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGCCAAGTGTACAAACTaGCTCTTCTGCTTCACGGTG +
Preference number: 4 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEAKCTN*LFCFTV
Trigger: CACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
CDS-3UTR CCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGEAVVS*RVHSAA
Trigger: AGCGGCGCTATGGACTCTCCAGGATACAACTGCTTC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDEAVVS*RVHSAA
Trigger: AGCGGCGCTATGGACTCTCCAGGATACAACTGCTTC...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGCCCCAGGTCCTGGATaGCAGCGTCCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLAPGPG*QRPSCL
Trigger: AAGACAAGATGGACGCTGCCATCCAGGACCTGGGGC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAAC +
Preference number: 4 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKRKFSA*TAKCTN
Trigger: GTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAACAGCAGAAGGGGCTaGCACAGGGCAAAGCGCTCG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQNSRRG*HRAKRS
Trigger: CGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTACACTCCCAAGGCCTTaGGCTATGGAAGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLTLPRP*AMEAST
Trigger: CGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGT...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCTCTGGGCAGACCCCTaGAAATGGAGCTTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLLWADP*KWSLLV
Trigger: GACCAGCAAGCTCCATTTCCAGGGGTCTGCCCAGAG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCCCAGAACAGCCACTTaGGCCTCTGTGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPPRTAT*ASVSPF
Trigger: GAAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGATCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGSSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCTGCTTCAGCAGGTTTTaGTTGAGTGACCAGACCACT +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCCFSRF*LSDQTT
Trigger: AGTGGTCTGGTCACTCAACCAAAACCTGCTGAAGCA...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACTCCAGCCCCCTTTCTaGGGGTTTCCTGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQLQPPF*GFPANL
Trigger: CAGGTTTGCAGGAAACCCTCAGAAAGGGGGCTGGAG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQSSPSR*RSPSGS
Trigger: ACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTAAACACAAGGACATGTaGCATCCCCCTCCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLKHKDM*HPPPAP
Trigger: GGGAGCTGGAGGGGGATGTCACATGTCCTTGTGTTT...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCCCAGGTCATTGCAATaGCAAAGAGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGPRSLQ*QRGEMG
Trigger: GCCCATTTCACCTCTTTGTCATTGCAATGACCTGGG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTCAGTTGGGGCTGCACTaGGATGAGCATGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPQLGLH*DEHATK
Trigger: CTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTG...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTCAGTTGGGGCTGCACTaGGATGAGCATGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAQLGLH*DEHATK
Trigger: CTTTGTGGCATGCTCATCTCAGTGCAGCCCCAACTG...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACACCCTCAAGACGAGTTaGAGGAGGTCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHTLKTS*RRSWGM
Trigger: CATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCCAGTCAGAGGCTACATaGGCAGATGGTCAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGQSEAT*ADGQGR
Trigger: CCTCCCCTGACCATCTGCTCATGTAGCCTCTGACTG...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQLSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGGAGGCCCCTCTGGCTaGAGAGATCAGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQGGPSG*RDQTQL
Trigger: AAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACCAGCAAGAATCTGGATaGGCTGGGCACAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHQQESG*AGHSSS
Trigger: TGAGCTGCTGTGCCCAGCTCATCCAGATTCTTGCTG...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCAGCAAGAATCTGGATaGGCTGGGCACAGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLQQESG*AGHSSS
Trigger: TGAGCTGCTGTGCCCAGCTCATCCAGATTCTTGCTG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCATAGATGTTGTAGGGTaGAGAGCCTATGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRIDVVG*RAYEAC
Trigger: ACAAGCCTCATAGGCTCTTCACCCTACAACATCTAT...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGATAGATGTTGTAGGGTaGAGAGCCTATGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGIDVVG*RAYEAC
Trigger: ACAAGCCTCATAGGCTCTTCACCCTACAACATCTAT...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCATAGTTTGGTAAAATaGGTGAGTCTGCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTHSLVK*VSLQLW
Trigger: CCACAATTGCAGACTCACTCATTTTACCAAACTATG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSSIAPL*SGGGPG
Trigger: TCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGTTCCTGCAGTTCAGTaGAGCTCAGCTCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTVPAVQ*SSAPWA
Trigger: GGCCCAAGGAGCTGAGCTGCACTGAACTGCAGGAAC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGCTTGCCCACGATCTTaGCCACGATGTCGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHACPRS*PRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTTCTCATTGGCCATCTaGAGGAGCTGGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGFSLAI*RSWISL
Trigger: CAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVTVMPF*FRAFSL
Trigger: CAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDTVMPF*FRAFSL
Trigger: CAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGT...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGAGTGACACACTCTTCTaGTTCACGGTGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWSDTLF*FTVMPF
Trigger: GAAGGGCATCACCGTGAAGCAGAAGAGTGTGTCACT...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGRSLRASPGATSSDGNTQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTTGGCCATGGGGTCCTaGCGTCCCCCAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSLAMGS*RPPTLP
Trigger: AGGCAGGGTTGGGGGACGGCAGGACCCCATGGCCAA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGAAAAGCTTCAGGCTCTaGAGAAACACAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKKSFRL*RNTRTC
Trigger: ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCATGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACATGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTGGAAAGTGGCACGGTaGAGGGGACTCCAAGTGGCA +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGWKVAR*RGLQVA
Trigger: TGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACCAGTTCAGGAAGTTTaGAGAGGGAAACCTACAAAT +
Preference number: 4 (lower is better)
Translates to: KVARCRGLQVALAGGQQGPVQEV*RGKPTN
Trigger: ATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGACAAACTGCCTCTTCTaGTTCACGGTGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGTNCLF*FTVMPF
Trigger: GAAGGGCATCACCGTGAAGCAGAAGAGGCAGTTTGT...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000627285.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTEAVVS*RVHSAA
Trigger: AGCGGCGCTATGGACTCTCCAGGATACAACTGCTTC...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGCCCCAGGTCCTGGATaGCAGCGTCCATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTAPGPG*QRPSCL
Trigger: AAGACAAGATGGACGCTGCCATCCAGGACCTGGGGC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAATGTCGGGGAACTGGTTaGCCAGGCACAGGAGGATCT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQCRGTG*PGTGGS
Trigger: AGATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACA...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQSLWAA*QYLFTR
Trigger: CCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTSLWAA*QYLFTR
Trigger: CCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGGGAGAAGAGGCGGATaGCGAACGCTTTCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTGRRGG*RTLSPA
Trigger: TGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGAGGGCAGGTTGAAGTaGCGAGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSEGRLK*RAARKG
Trigger: GCCCTTCCTGGCCGCTCGCCACTTCAACCTGCCCTC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGACAAAGAGGTGAAATaGGCAGCTGCAGAGGCTACA +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVDKEVK*AAAEAT
Trigger: TGTAGCCTCTGCAGCTGCCCATTTCACCTCTTTGTC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTGTGCAGAGAAGCAGTTaGGGCTGCACTGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAVQRSS*GCTEMS
Trigger: GCTCATCTCAGTGCAGCCCCAACTGCTTCTCTGCAC...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTGCATCCATGCAAGGTaGCCAAGGAGGTGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHCIHAR*PRRCCV
Trigger: CACACAGCACCTCCTTGGCCACCTTGCATGGATGCA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCCCAAGTGGCACTGGCTaGAGGCCAGCAGGGACGGGG +
Preference number: 4 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFPSGTG*RPAGTG
Trigger: CCCCGTCCCTGCTGGCCTCCAGCCAGTGCCACTTGG...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGGGAGGAGCAGGCAATaGTGTGGGGATGGAAAGTGG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGGRSRQ*CGDGKW
Trigger: CCACTTTCCATCCCCACACCATTGCCTGCTCCTCCC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACTGGAGGGCTCCCTCTaGAAGAGGCTTGCAGCATTC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTLEGSL*KRLAAF
Trigger: GAATGCTGCAAGCCTCTTCCAGAGGGAGCCCTCCAG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCACTGCAAAGGCTTTATaGGTTCAGAAAGTGGATAAG +
Preference number: 4 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLTAKAL*VQKVDK
Trigger: CTTATCCACTTTCTGAACCCATAAAGCCTTTGCAGT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTCACATTTTCAAAGTTaGATTGTGCTGCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSSHFQS*IVLQIH
Trigger: ATGGATTTGCAGCACAATCCAACTTTGAAAATGTGA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CAA 72 bp CATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTaGTCAGCTTGCCCAAAGCCACACAGGGTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: HFTAGETEFQTG*SACPKPHRVPG
Trigger: ACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR TCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCCATAGTTTGGTAAAATaGGTGAGTCTGCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPHSLVK*VSLQLW
Trigger: CCACAATTGCAGACTCACTCATTTTACCAAACTATG...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGTTTCTGAGGGTTTCCTaGAAACCTGTCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVFLRVS*KPVCHL
Trigger: GAGATGGCAGACAGGTTTGCAGGAAACCCTCAGAAA...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTTTCTGAGGGTTTCCTaGAAACCTGTCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGFLRVS*KPVCHL
Trigger: GAGATGGCAGACAGGTTTGCAGGAAACCCTCAGAAA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR GCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTTTCTGAGGGTTTCCTaGAAACCTGTCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDFLRVS*KPVCHL
Trigger: GAGATGGCAGACAGGTTTGCAGGAAACCCTCAGAAA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000646147.1
CDS-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACAACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTTVMPF*FRAFSL
Trigger: CAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGT...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGCCAGGCTGTACCCGTaGTGCAGGGAGGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSARLYP*CREENS
Trigger: GCTGTTCTCCTCCCTGCAGCACGGGTACAGCCTGGC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCACACACCTCCTTCTaGGTGGTCTTGATGAGCAAG +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLPHTSF*VVLMSK
Trigger: CTTGCTCATCAAGACCACGCAGAAGGAGGTGTGTGG...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCAAACTTATTTCTCTCACTCCAGTCTGTGGACAGGTAAGCACCACACACCTCGCCGTCCCCCAACCCTaGCTACCACATGGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SKLISLTPVCGQVSTTHLAVPQP*LPHGGF
Trigger: GAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGC...GAGGTGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGAGAAATAAGTTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCAAAAGCTTCAGGCTCTaGAGAAACACAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCKSFRL*RNTRTC
Trigger: ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTT...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCACGGGTTTGTCAGCTTaGCCAAAGCCACACAGGGTT +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLTGLSA*PKPHRV
Trigger: AACCCTGTGTGGCTTTGGGCAAGCTGACAAACCCGT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSSRIRR*YTFPRR
Trigger: CCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTCAGGGCTTTCTCATTaGCCATCTGCAGGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHSGLSH*PSAGAG
Trigger: TCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGAAAACCCTGACACGTaGCCAGCCACAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTENPDT*PATAPQ
Trigger: TTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAGGCTACATGAGCAGATaGTCAGGGGAGGCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQGYMSR*SGEAKA
Trigger: GGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTCCAGTCATAGAATGTaGGTGAGCACTACAGCGGGC +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEASSHRM*VSTTAG
Trigger: GCCCGCTGTAGTGCTCACCCACATTCTATGACTGGA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACAGAGCAGCCACTTTTaGCTAATTTTTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQQSSHF*LIFNIQ
Trigger: TTGGATGTTAAAAATTAGCCAAAAGTGGCTGCTCTG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAAGAATCTGGATGAGCTaGGCACAGCAGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTRIWMS*AQQLTP
Trigger: AGGCGTGAGCTGCTGTGCCCAGCTCATCCAGATTCT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCGAACCAGCAAGAATCTaGATGAGCTGGGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLEPARI*MSWAQQ
Trigger: CTGCTGTGCCCAGCTCATCCAGATTCTTGCTGGTTC...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTCCTGGACTTTCCACCTaGGATGGTAGAAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAPGLST*DGRSSQ
Trigger: CTGGGAACTTCTACCATCCCAGGTGGAAAGTCCAGG...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR TCA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCTGCCTTTTAGAAAGTaGCACACTCTTCTGCTTCAC +
Preference number: 4 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGLPFRK*HTLLLH
Trigger: GTGAAGCAGAAGAGTGTGTCACTTTCTAAAAGGCAG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646147.1
CDS-3UTR TCA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTTTGGAGCCCTGGAGTTaGTGCAGCAAGACCATGTTT +
Preference number: 4 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLLEPWS*CSKTMF
Trigger: AAACATGGTCTTGCTGCATCAACTCCAGGGCTCCAA...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR TCA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAACAAGACATTTAGGCTaGGAAAGAGAACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQATRHLG*EREPAR
Trigger: TCTTGCTGGTTCTCTTTCTCAGCCTAAATGTCTTGT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGCATAGTTTGGTAAAATaGGTGAGTCTGCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGHSLVK*VSLQLW
Trigger: CCACAATTGCAGACTCACTCATTTTACCAAACTATG...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCTVMPF*FRAFSL
Trigger: CAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGT...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCGTTTCATCTGCTCTCTaGTGCCCGAGGCGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFVSSAL*CPRRQP
Trigger: GGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAAC...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCATGGGGGTTTCATCTaGTCTCTGCTGCCCGAGGCG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSHGGFI*SLLPEA
Trigger: CGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTGGGCCCCAGGTCATTaGAATGACAAAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMWAPGH*NDKEVK
Trigger: TTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGCCTCTGGAAGAGGCTTaGAGCATTCCAGTCATAGAA +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMPLEEA*SIPVIE
Trigger: TTCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGG...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp ATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGCCAGTTCAGGAAGTTTaGAGAGGGAAACCTACAAAT +
Preference number: 4 (lower is better)
Translates to: IHPIPLRASQQSCEEDSRPVQEV*RGKPTN
Trigger: ATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGG...CCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCCAGTTCAGGAAGTTTaGAGAGGGAAACCTACAAAT +
Preference number: 4 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVPVQEV*RGKPTN
Trigger: ATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCAAGCATTTGACCAAATaGCAATGTTTTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPKHLTK*QCFCQF
Trigger: GAACTGGCAAAAACATTGGCATTTGGTCAAATGCTT...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTCCTGCAAACCTGTCTaGCATCTCACACCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEASCKPV*HLTPFP
Trigger: TGGAAAGGGTGTGAGATGGCAGACAGGTTTGCAGGA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627285.1
CDS-3UTR GCA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTACAAACTCTTCTaGTTCACGGTGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMVYKLF*FTVMPF
Trigger: GAAGGGCATCACCGTGAAGCAGAAGAGTTTGTACAC...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACA +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCSHSSL*TGKHHT
Trigger: TGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGA...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCAAACTTATTTCTCTCACTCCAGTCTGTGGACAGGTAAGCACCACACACCTCTTGAAGGTGTCGCAGTaGCTTGTGCGGCCCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SKLISLTPVCGQVSTTHLLKVSQ*LVRPRF
Trigger: GAACCGGGGCCGCACAAGCCACTGCGACACCTTCAA...GAGGTGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGAGAAATAAGTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAACCCTGCCTACCACATaGGGGTTTCATCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQTLPTT*GFHLLS
Trigger: AGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCAAGGCCTTGGGCTATaGAAGCCTCCACGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSQGLGL*KPPRRR
Trigger: CCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSSSPSR*RSPSGS
Trigger: ACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCACAAGACATTTAGGCTaGGAAAGAGAACCAGCAAGA +
Preference number: 4 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFTRHLG*EREPAR
Trigger: TCTTGCTGGTTCTCTTTCTCAGCCTAAATGTCTTGT...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTTTTCTGAGGGTTTCCTaGAAACCTGTCTGCCATCTC +
Preference number: 4 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCFLRVS*KPVCHL
Trigger: GAGATGGCAGACAGGTTTGCAGGAAACCCTCAGAAA...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000646147.1
CDS-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTTCTCATTGGCCATCTaGAGGAGCTGGATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGFSLAI*RSWISL
Trigger: CAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTAGGCTGTACCCGTGCTaGAGGGAGGAGAACAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSRLYPC*REENSR
Trigger: TCTGCTGTTCTCCTCCCTGCAGCACGGGTACAGCCT...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGTTCAAAGTTGGATTGTaGTGCAAATCCATACATTTG +
Preference number: 4 (lower is better)
Translates to: WKVARCRGLQVALAGGQQFKVGL*CKSIHL
Trigger: CAAATGTATGGATTTGCAGCACAATCCAACTTTGAA...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAACAAACTGCCTCTTCTaGTTCACGGTGATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTTNCLF*FTVMPF
Trigger: GAAGGGCATCACCGTGAAGCAGAAGAGGCAGTTTGT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000627285.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTAAGGGGAGGACAGAGTaGCTAAATCCTCCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSKGRTE*LNPPAP
Trigger: GGGGGCTGGAGGATTTAGCCACTCTGTCCTCCCCTT...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAAC +
Preference number: 4 (lower is better)
Translates to: QGGPAKASGSAETQGHVTRKFSA*TAKCTN
Trigger: GTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTCTCGGGATCTACGCTaGGATTCAGTCGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSSRDLR*DSVASQ
Trigger: CTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTGCAATGGTGTGGGGATaGAAAGTGGCACGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSAMVWG*KVARCR
Trigger: CCTGCACCGTGCCACTTTCCATCCCCACACCATTGC...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCCTCTCAACAGTCCTGTaGGGAGGACAGCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFLSTVL*GGQQGM
Trigger: CATGCCCTGCTGTCCTCCTCACAGGACTGTTGAGAG...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGCCAAGTGTACAAACTaGCTTTTAGAAAGTGACACA +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGAKCTN*LLESDT
Trigger: TGTGTCACTTTCTAAAAGGCAGTTTGTACACTTGGC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGGAGCTCAAGGAGGCCTaGGCTGGAAGGGAGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQELKEA*AGREGS
Trigger: GCTCCCCTCCCTTCCAGCCCAGGCCTCCTTGAGCTC...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCCAGAGCAGCCACTTTTaGCTAATTTTTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASQSSHF*LIFNIQ
Trigger: TTGGATGTTAAAAATTAGCCAAAAGTGGCTGCTCTG...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACACTGCAAAGGCTTTATaGGTTCAGAAAGTGGATAAG +
Preference number: 4 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDTAKAL*VQKVDK
Trigger: CTTATCCACTTTCTGAACCCATAAAGCCTTTGCAGT...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGTGGATAAGAGAAATATaGAGGCCTCTGAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVWIREI*RPLKSS
Trigger: TGAAGATTTCAGAGGCCTTCATATTTCTCTTATCCA...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCATAGATGTTGTAGGGTaGAGAGCCTATGAGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGIDVVG*RAYEAC
Trigger: ACAAGCCTCATAGGCTCTTCACCCTACAACATCTAT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACACAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAAAAGCTTCAGGCTCTaGAGAAACACAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLKSFRL*RNTRTC
Trigger: ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACAAAAGCTTCAGGCTCTaGAGAAACACAAGGACATGT +
Preference number: 4 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHKSFRL*RNTRTC
Trigger: ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAAAGCATTTGACCAAATaGCAATGTTTTTGCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ERLTENPDTWPATAPQEGKHLTK*QCFCQF
Trigger: GAACTGGCAAAAACATTGGCATTTGGTCAAATGCTT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCTCACATTTTCAAAGTTaGATTGTGCTGCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASSHFQS*IVLQIH
Trigger: ATGGATTTGCAGCACAATCCAACTTTGAAAATGTGA...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGCCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGC +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQPCGRT*GWPAPR
Trigger: GCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGG...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGAGGCCCACCCTTAGCTaGACGTTCCCACTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQRPTLS*TFPLPL
Trigger: CAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCT...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACCAGTTCAGGAAGTTTaGAGAGGGAAACCTACAAAT +
Preference number: 4 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQPVQEV*RGKPTN
Trigger: ATTTGTAGGTTTCCCTCTGCAAACTTCCTGAACTGG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR GCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGTTCAAAGTTGGATTGTaGTGCAAATCCATACATTTG +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVFKVGL*CKSIHL
Trigger: CAAATGTATGGATTTGCAGCACAATCCAACTTTGAA...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGTTCAAAGTTGGATTGTaGTGCAAATCCATACATTTG +
Preference number: 4 (lower is better)
Translates to: AMEASTEEEGTSYASSGWFKVGL*CKSIHL
Trigger: CAAATGTATGGATTTGCAGCACAATCCAACTTTGAA...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGGGGTCCAGGCTTCTCTaGGCAGACCCCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQGSRLL*ADPWKW
Trigger: CCATTTCCAGGGGTCTGCCCAGAGAAGCCTGGACCC...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGGAGGACAGCAGGGCATaGGGACTGGCCCCATTTCAC +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQEDSRA*GLAPFH
Trigger: GTGAAATGGGGCCAGTCCCCATGCCCTGCTGTCCTC...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACACAGAGCAGCCACTTTTaGCTAATTTTTAACATCCAA +
Preference number: 4 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTQSSHF*LIFNIQ
Trigger: TTGGATGTTAAAAATTAGCCAAAAGTGGCTGCTCTG...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CCA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGTCACATTTTCAAAGTTaGATTGTGCTGCAAATCCAT +
Preference number: 4 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVSHFQS*IVLQIH
Trigger: ATGGATTTGCAGCACAATCCAACTTTGAAAATGTGA...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGGGAGGCCCCTCTGGCTaGAGAGATCAGACTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQGGPSG*RDQTQL
Trigger: AAGCTGAGTCTGATCTCTTCAGCCAGAGGGGCCTCC...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR TCA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTTGGATAAGAGAAATATaGAGGCCTCTGAAATCTTCA +
Preference number: 4 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPWIREI*RPLKSS
Trigger: TGAAGATTTCAGAGGCCTTCATATTTCTCTTATCCA...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR GCA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCCAAAGAAGCCCAGTTTaGCTCCAAACTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGQRSPV*LQTYFS
Trigger: AGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTG...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
3UTR CAA 72 bp AACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTCTCACTCCAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NTKHSPVPKKPS*PPNLFLSLQSV
Trigger: CACAGACTGGAGTGAGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR GCA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGAGAAGCAGTTGGGGCTaGACTGAGATGAGCATGCCA +
Preference number: 4 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQRSSWG*TEMSMP
Trigger: TGGCATGCTCATCTCAGTGCAGCCCCAACTGCTTCT...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CAA 72 bp ATGCAACAATGCTTATTTCTTTGTTTTGATATTGACTaGGGGGAAGGTGAGGGTACATGGAAACCCTGTACC +
Preference number: 4 (lower is better)
Translates to: MQQCLFLCFDID*GEGEGTWKPCT
Trigger: GGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAACAAAGAAATAAGCATTGTTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
3UTR CAA 72 bp GGAGGCATTTTGTTTTTAGCAATGAATCACATTACATaGTACCTAACTTCTCAAGCACAATCTGATACTAAG +
Preference number: 4 (lower is better)
Translates to: GGILFLAMNHIT*YLTSQAQSDTK
Trigger: CTTAGTATCAGATTGTGCTTGAGAAGTTAGGTACAATGTAATGTGATTCATTGCTAAAAACAAAATGCCTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 90 bp CTGTCTGCCATCTCACACCCTCCGCGCGCCGCTTTCTCCTCAGCCTaGCGCGCCGGCCTTTCTGCGCACGCGCGTGCTCGGCCCCGCCCC +
Preference number: 5 (lower is better)
Translates to: LSAISHPPRAAFSSA*RAGLSAHARARPRP
Trigger: GGGGCGGGGCCGAGCACGCGCGTGCGCAGAAAGGCCGGCGCGGCAGGCTGAGGAGAAAGCGGCGCGCGGAGGGTGTGAGATGGCAGACAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567020.6
CDS GCA 90 bp GTGAGCCCGAGGCACGAGAACGGCCGAGGGGAGAGGGAGAAGTCCTaGCGCCTGCTCAGCGGTTTCCAGTGGCCCAGCCCCCGGTGCCAC +
Preference number: 5 (lower is better)
Translates to: VSPRHENGRGEREKS*RLLSGFQWPSPRCH
Trigger: GTGGCACCGGGGGCTGGGCCACTGGAAACCGCTGAGCAGGCGGCAGGACTTCTCCCTCTCCCCTCGGCCGTTCTCGTGCCTCGGGCTCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCAGGGCGTGGCTTaGGGCCCAGTAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGPQGVA*GPVALA
Trigger: CGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGCGG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS GCA 90 bp CGAGGCACGAGAACGGCCGAGGGGAGAGGGAGAAGTCCTGCCGCCTaGTCAGCGGTTTCCAGTGGCCCAGCCCCCGGTGCCACCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RGTRTAEGRGRSPAA*SAVSSGPAPGATWH
Trigger: ATGCCAGGTGGCACCGGGGGCTGGGCCACTGGAAACCGCTGAGCAGGCGGCAGGACTTCTCCCTCTCCCCTCGGCCGTTCTCGTGCCTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp GCCGCCTGCTCAGCGGTTTCCAGTGGCCCAGCCCCCGGTGCCACCTaGCATCCTTCGCAGCACTCCTCACCGACACCCTCTCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: AACSAVSSGPAPGAT*HPSQHSSPTPSPLQ
Trigger: CTGGAGAGGAGAGGGTGTCGGTGAGGAGTGCTGCGAAGGATGCCAGGTGGCACCGGGGGCTGGGCCACTGGAAACCGCTGAGCAGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGCTGGGCACCTGCGTGTaGTCCACGAACTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RGKASPGTYLRLASAGLRLGTCV*STNSGS
Trigger: GCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCAG...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCAGGCACAGGAGGATCTaGCGCACGGCCCCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLRHRRI*RTAPSP
Trigger: CGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPTATIS*WAAWQY
Trigger: GTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPTFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTGGGCACCTGCGTGTaGTCCACGAACTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRLGTCV*STNSGS
Trigger: GCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCAG...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQLLPGS*QARMRQ
Trigger: CTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGAGGAGAACAGCAGAAGGGGCTGGCACAGGGCAAAGCGCTCGGGGACCCAGGGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GRRTAEGAGTGQSARGPRVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...CCTGGGTCCCCGAGCGCTTTGCCCTGTGCCAGCCCCTTCTGCTGTTCTCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: PCLPHGGFICSLLPEAAAQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGQLLLC*PTILPT
Trigger: CGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTG...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCTGGGCACCTGCGTGTaGTCCACGAACTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: PCLPHGGFICSLLPEAAALGTCV*STNSGS
Trigger: GCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCAG...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: LGRSLRASPGATSSDGNTRCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: WKVARCRGLQVALAGGQQQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPDTPKA*GYGSLH
Trigger: GTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS GCA 90 bp GTTGGCCAGGCACAGGAGGATCTTGCGCACGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGGCACCTGCGTGTTGTCCACGAACTC +
Preference number: 5 (lower is better)
Translates to: VGQAQEDLAHGPLAA*IQAVAGHLRVVHEL
Trigger: GAGTTCGTGGACAACACGCAGGTGCCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCTGGCCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp GGGGACACCGTCTTCGCGATGTCTCTGACGAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCCAGCGGCTGCCCGGCCCTCACCTTG +
Preference number: 5 (lower is better)
Translates to: GDTVFAMSLTNVRMS*FTLSDSSGCPALTL
Trigger: CAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTTCGTCAGAGACATCGCGAAGACGGTGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp ACCTGGTGCCAGAGAGCCTGTGGCTGTGTTGGGGGCCAAGCTTCCTaGCAGGCTAGCAGACCAGGAGGCCTCTCAGACCCGGGACAGGTG +
Preference number: 5 (lower is better)
Translates to: TWCQRACGCVGGQAS*QASRPGGLSDPGQV
Trigger: CACCTGTCCCGGGTCTGAGAGGCCTCCTGGTCTGCTAGCCTGGCAGGAAGCTTGGCCCCCAACACAGCCACAGGCTCTCTGGCACCAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 90 bp AGCTGCAGGGAGGGCCCCCAGCAGCCTCGGTCTCACTGGAGGAACTaGACAGGGAGGGGGCATCTGTGCAGGGCTCAGCCTCCTAAAGTC +
Preference number: 5 (lower is better)
Translates to: SCREGPQQPRSHWRN*TGRGHLCRAQPPKV
Trigger: GACTTTAGGAGGCTGAGCCCTGCACAGATGCCCCCTCCCTGTCCAGTTCCTCCAGTGAGACCGAGGCTGCTGGGGGCCCTCCCTGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGCCGCAGGGCGTGGCTTaGGGCCCAGTAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVPQGVA*GPVALA
Trigger: CGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGCGG...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCACTGGGCACCTGCGTGTaGTCCACGAACTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSLGTCV*STNSGS
Trigger: GCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCAG...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGAGGCACAGGAGGATCTaGCGCACGGCCCCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVRHRRI*RTAPSP
Trigger: CGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCT...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCTCCTCATGTCGGGGAACTGGTaGGCCAGGCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: LCGPGSGPHRCRAPGRLLMSGNW*ARHRRI
Trigger: GATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACAT...GAGGAGGCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp GGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTAGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GGVRQGAGPRVPVCSRDLAAWQY*FTRSPN
Trigger: GTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGC...TAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GTGAGCACTACAGCGGGCAGCCTCCCACACCTGCTTGGCTGTAGGCCCAGGAAGACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: VSTTAGSLPHLLGCRPRKTATIS*WAAWQY
Trigger: GTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT...CTTCCTGGGCCTACAGCCAAGCAGGTGTGGGAGGCTGCCCGCTGTAGTGCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGAACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: KVARCRGLQVALAGGQQGTATIS*WAAWQY
Trigger: GTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSTATIS*WAAWQY
Trigger: GTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: LGRSLRASPGATSSDGNTIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSRCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTGTAGGCCCAGGAAGCCCCCGGAGGCCCCTCTGGCTGAAGAGATCAGACTCAACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: AVGPGSPRRPLWLKRSDSTFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...TGAGTCTGATCTCTTCAGCCAGAGGGGCCTCCGGGGGCTTCCTGGGCCTACAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS TCA 90 bp CCACGATCTTGCCCACGATGTCGCTGTACACGCTGGCGTCAGGCGTaGCCGTGCGGCAGGGAATGTCCCGGATCAGGCGCTGGTACACCT +
Preference number: 5 (lower is better)
Translates to: PRSCPRCRCTRWRQA*PCGRECPGSGAGTP
Trigger: AGGTGTACCAGCGCCTGATCCGGGACATTCCCTGCCGCACGGTCACGCCTGACGCCAGCGTGTACAGCGACATCGTGGGCAAGATCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 90 bp TGTCCGACTCCAGCGGCTGCCCGGCCCTCACCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGCGGTACAGCACCTTGTAGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: CPTPAAARPSPCGRT*GWPAPRGTAPCSPP
Trigger: TGGAGGGCTACAAGGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp TGCGTGTTGTCCACGAACTCGGGCAGCGGCAGGCAGCTGCTGCTGTaGTTGCCCACGATCTTGCCCACGATGTCGCTGTACACGCTGGCG +
Preference number: 5 (lower is better)
Translates to: CVLSTNSGSGRQLLL*LPTILPTMSLYTLA
Trigger: CGCCAGCGTGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTTCGTGGACAACACGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp GCACCTGCGTGTTGTCCACGAACTCGGGCAGCGGCAGGCAGCTGCTaGTGTGCTTGCCCACGATCTTGCCCACGATGTCGCTGTACACGC +
Preference number: 5 (lower is better)
Translates to: APACCPRTRAAAGSC*CACPRSCPRCRCTR
Trigger: GCGTGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTTCGTGGACAACACGCAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp CAAAGGCCAGGAAGCTCTGGTCGATCAGCCTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGGCCTTCTCGAAGCACTCGGCCTCGT +
Preference number: 5 (lower is better)
Translates to: QRPGSSGRSASCRGH*RPGCGRPSRSTRPR
Trigger: ACGAGGCCGAGTGCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp ACGAACGTGCGGATGTCCTGCTTCACGCTGTCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGGAAGAACTTGAGGATGGCCAGCGCC +
Preference number: 5 (lower is better)
Translates to: TNVRMSCFTLSDSSG*PALTLWKNLRMASA
Trigger: GGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 90 bp TGCTTCACGCTGTCCGACTCCAGCGGCTGCCCGGCCCTCACCTTGTaGAAGAACTTGAGGATGGCCAGCGCCACGCGGTACAGCACCTTG +
Preference number: 5 (lower is better)
Translates to: CFTLSDSSGCPALTL*KNLRMASATRYSTL
Trigger: CAAGGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 90 bp TTGATGGAAAAGGGCCTGAGTGGGCCCTCCTCTTTGAGGACCCAGTaGGGTGGGCAGGGAGTCCAGCCGGCCCTGACCACTAGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LMEKGLSGPSSLRTQ*GGQGVQPALTTRQQ
Trigger: CTGCTGCCTAGTGGTCAGGGCCGGCTGGACTCCCTGCCCACCCCACTGGGTCCTCAAAGAGGAGGGCCCACTCAGGCCCTTTTCCATCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCAGGCACAGGAGGATCTaGCGCACGGCCCCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFRHRRI*RTAPSP
Trigger: CGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCT...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQALLPGS*QARMRQ
Trigger: CTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCACTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTALLPGS*QARMRQ
Trigger: CTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAG...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GTCLCDPGFHGPRTATWARCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS TCA 90 bp GCCTCCTCCGGCTGGGGGACCTTCCTTGCAAGTCCACGCCAAGTCTaGTTTCTTCATGAGGGGCCCAGGCCTCCCACCTACGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ASSGWGTFLASPRQV*FLHEGPRPPTYVLG
Trigger: TCCCAGCACGTAGGTGGGAGGCCTGGGCCCCTCATGAAGAAATCAGACTTGGCGTGGACTTGCAAGGAAGGTCCCCCAGCCGGAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp TGTTGTCCACGAACTCGGGCAGCGGCAGGCAGCTGCTGCTGTGCTTaGCCACGATCTTGCCCACGATGTCGCTGTACACGCTGGCGTCAG +
Preference number: 5 (lower is better)
Translates to: CCPRTRAAAGSCCCA*PRSCPRCRCTRWRQ
Trigger: CTGACGCCAGCGTGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTTCGTGGACAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp TGGGCACCTGCGTGTTGTCCACGAACTCGGGCAGCGGCAGGCAGCTaGTGCTGTGCTTGCCCACGATCTTGCCCACGATGTCGCTGTACA +
Preference number: 5 (lower is better)
Translates to: WAPACCPRTRAAAGS*CCACPRSCPRCRCT
Trigger: TGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp TGCAGGACGACTCAAAGGCCAGGAAGCTCTGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCAGGATGCGGCAGGCCTTCTCGAAGC +
Preference number: 5 (lower is better)
Translates to: CRTTQRPGSSGRSAS*RGHCRPGCGRPSRS
Trigger: GCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp TTCGCAGCACTCCTCACCGACACCCTCTCCTCTCCAGCTCACAGCTaGCCCGTCCCACCCACTCTACCCCAAGAAAGGGGGCTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: FAALLTDTLSSPAHS*PVPPTLPQERGLVR
Trigger: CCTGACAAGCCCCCTTTCTTGGGGTAGAGTGGGTGGGACGGGGCAGCTGTGAGCTGGAGAGGAGAGGGTGTCGGTGAGGAGTGCTGCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTCCGCAGGGCGTGGCTTaGGGCCCAGTAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCPQGVA*GPVALA
Trigger: CGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGCGG...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCATGTCGGGGAACTGGTaGGCCAGGCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPMSGNW*ARHRRI
Trigger: GATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACAT...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGLLPGS*QARMRQ
Trigger: CTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: PCLPHGGFICSLLPEAAACPALT*WKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCA...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LGRSLRASPGATSSDGNTQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASTFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAATCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCCCCTCTGGAAGAGGCTaGCAGCATTCCAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPPSGRG*QHSSHR
Trigger: TCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGG...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS TCA 90 bp CGGGGAGCTCAGGGAAATCCTGGGAGGGACACTAGGGCCCAGGCATaGGGAGTGGCAAATAGCACGCGCAAAGGCCGGGAAACAGAGGCT +
Preference number: 5 (lower is better)
Translates to: RGAQGNPGRDTRAQA*GVANSTRKGRETEA
Trigger: AGCCTCTGTTTCCCGGCCTTTGCGCGTGCTATTTGCCACTCCTCATGCCTGGGCCCTAGTGTCCCTCCCAGGATTTCCCTGAGCTCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 90 bp TTGTCCACGAAGCAGTTGTATCCTGGAGAGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGACTGCCGGAAGGGGAGGACAGAGTG +
Preference number: 5 (lower is better)
Translates to: LSTKQLYPGESIAPL*SGGGPGLPEGEDRV
Trigger: CACTCTGTCCTCCCCTTCCGGCAGTCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp GCCAGGCTAGCAGACCAGGAGGCCTCTCAGACCCGGGACAGGTGCTaGCCCAACAGTCCCCTGAAGGTACTGAAGGAAGGTGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: ARLADQEASQTRDRC*PNSPLKVLKEGVQR
Trigger: CCTCTGAACACCTTCCTTCAGTACCTTCAGGGGACTGTTGGGGCAGCACCTGTCCCGGGTCTGAGAGGCCTCCTGGTCTGCTAGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 90 bp CCTGCCAGGCTAGCAGACCAGGAGGCCTCTCAGACCCGGGACAGGTaGTGCCCCAACAGTCCCCTGAAGGTACTGAAGGAAGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: PARLADQEASQTRDR*CPNSPLKVLKEGVQ
Trigger: CTGAACACCTTCCTTCAGTACCTTCAGGGGACTGTTGGGGCAGCACCTGTCCCGGGTCTGAGAGGCCTCCTGGTCTGCTAGCCTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 90 bp AGGTCCCCAAACGTCATGCAGGACGACTCAAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCGGGGTCATTGCAGGCCAGGATGCGG +
Preference number: 5 (lower is better)
Translates to: RSPNVMQDDSKARKL*SISLLPGSLQARMR
Trigger: CCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 90 bp CTCCTCCCACTCGGAGCTGTGACTCCCCGCATCCACCAGCCACTCTaGCTTTTCTCTCTTGCCAGCTCAGCCTGGACCGTCTTGCCAAGC +
Preference number: 5 (lower is better)
Translates to: LLPLGAVTPRIHQPL*LFSLASSAWTVLPS
Trigger: GCTTGGCAAGACGGTCCAGGCTGAGCTGGCAAGAGAGAAAAGCCAGAGTGGCTGGTGGATGCGGGGAGTCACAGCTCCGAGTGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp CCCACCGCCCTAGGCCTCAGCCCTGGAACAATGGAGCTGGCACAGTaGACCACGACGGAAGAGAGCCACTGGACTTGTCTGTGCACTCAG +
Preference number: 5 (lower is better)
Translates to: PTALGLSPGTMELAQ*TTTEESHWTCLCTQ
Trigger: CTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAGCTCCATTGTTCCAGGGCTGAGGCCTAGGGCGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACCGCAGGGCGTGGCTTaGGGCCCAGTAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTPQGVA*GPVALA
Trigger: CGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGCGG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGATGCTTGCCCACGATCTaGCCCACGATGTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: KVARCRGLQVALAGGQQGCLPTI*PTMSLY
Trigger: GTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCA...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAQLLLC*PTILPT
Trigger: CGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGCAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVQLLLC*PTILPT
Trigger: CGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTG...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPCPALT*WKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCA...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: GTCLCDPGFHGPRTATWARSWIS*REKRRM
Trigger: CATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCT...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLSFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERLTENPDTWPATAPQEGVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGRCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGAACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: ERLTENPDTWPATAPQEGTFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCACCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: LGRSLRASPGATSSDGNTDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAAGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS TCA 90 bp CCCCACGCTCCTGTCTCAGCCATATGGATAAACTGCACGAGGAAGTaGGCCCGAGGCACGAGAACGGCCGAGGGGAGAGGGAGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: PHAPVSAIWINCTRK*ARGTRTAEGRGRSP
Trigger: AGGACTTCTCCCTCTCCCCTCGGCCGTTCTCGTGCCTCGGGCTCACTTCCTCGTGCAGTTTATCCATATGGCTGAGACAGGAGCGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS TCA 90 bp CTGGGGGACCTTCCTTGCAAGTCCACGCCAAGTCTGATTTCTTCATaGGGGGCCCAGGCCTCCCACCTACGTGCTGGGAAAGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LGDLPCKSTPSLISS*GAQASHLRAGKGQG
Trigger: TCCCTGGCCTTTCCCAGCACGTAGGTGGGAGGCCTGGGCCCCTCATGAAGAAATCAGACTTGGCGTGGACTTGCAAGGAAGGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp CTAAATCCTCCAGCCCCCTTTCTGAGGGTTTCCTGCAAACCTGTCTaGCATCTCACACCCTCCGCGCGCCGCTTTCTCCTCAGCCTGCCG +
Preference number: 5 (lower is better)
Translates to: LNPPAPFLRVSCKPV*HLTPSARRFLLSLP
Trigger: CGGCAGGCTGAGGAGAAAGCGGCGCGCGGAGGGTGTGAGATGGCAGACAGGTTTGCAGGAAACCCTCAGAAAGGGGGCTGGAGGATTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000646147.1
CDS CCA 90 bp TGCAGGACATCCTCCGACACGGCCACCATCAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGGTCCCCAAACGTCATGCAGGACGAC +
Preference number: 5 (lower is better)
Translates to: CRTSSDTATISLWAA*QYLFTRSPNVMQDD
Trigger: GTCGTCCTGCATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGTGTCGGAGGATGTCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCGCGTCCATCTTGTCTTaGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPASILS*STKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGC...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCATGGCAGCGTCCATCTaGTCTTTGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLMAASI*SLSTKQ
Trigger: CTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCTGCTTGCCCACGATCTaGCCCACGATGTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCCLPTI*PTMSLY
Trigger: GTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCA...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAAGGCACAGGAGGATCTaGCGCACGGCCCCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTRHRRI*RTAPSP
Trigger: CGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCT...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGATGTCGGGGAACTGGTaGGCCAGGCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVMSGNW*ARHRRI
Trigger: GATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACAT...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAATGTCGGGGAACTGGTaGGCCAGGCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAMSGNW*ARHRRI
Trigger: GATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACAT...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGATTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: GFTPSPCEPLNSPVRRTAAAWQY*FTRSPN
Trigger: GTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGC...TGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAATCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGERSWIS*REKRRM
Trigger: CATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AAGCCCCAGGCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: KPQASTAAMRKFSEQRGWFRAFS*AICRSW
Trigger: CCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAA...CCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGCCTGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp AAGCCCCAGGCCTCCACGGCAGCAATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: KPQASTAAMRKFSEQRGWSFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...CCAGCCCCTCTGCTCCGAGAACTTCCTCATTGCTGCCGTGGAGGCCTGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTCAGGCAACGCCAGGCTaGGCCATGGGGTCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCQATPG*AMGSCR
Trigger: ACGGCAGGACCCCATGGCCAAGCCTGGCGTTGCCTG...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGEDTPKA*GYGSLH
Trigger: GTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKDTPKA*GYGSLH
Trigger: GTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGAGGTCACAAGGCAGGGGGCTGCCCCCTATAGTGCCCAGAGGCAAGGCCTCCCCTCTGGAAGAGGCTaGCAGCATTCCAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: REVTRQGAAPYSAQRQGLPSGRG*QHSSHR
Trigger: TCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGG...GAGGCCTTGCCTCTGGGCACTATAGGGGGCAGCCCCCTGCCTTGTGACCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACCCTCTGGAAGAGGCTaGCAGCATTCCAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQPSGRG*QHSSHR
Trigger: TCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS TCA 90 bp CTTTCTCCAGCAGCTTCTCAGGGGACACCGTCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCTGCTTCACGCTGTCCGACTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LSPAASQGTPSSRCL*RTCGCPASRCPTPA
Trigger: CGCTGGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTTCGTCAGAGACATCGCGAAGACGGTGTCCCCTGAGAAGCTGCTGGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 90 bp AGCGCTCGGGGACCCAGGACCAGATGTCTCTCATCTCCCTCACGCTaGCGATCTCCGAGCGGAAGTTCTCTGCATGGACGGCCAAGTGTA +
Preference number: 5 (lower is better)
Translates to: SARGPRTRCLSSPSR*RSPSGSSLHGRPSV
Trigger: TACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGAGAGACATCTGGTCCTGGGTCCCCGAGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp TGTGGGCCGCCTGGCAGTACTTGTTCACCAGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCAGGAAGCTCTGGTCGATCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: CGPPGSTCSPGPQTS*RTTQRPGSSGRSAS
Trigger: GGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 90 bp CTGTCGCCTCAGTGGAGAGACTCGCTGGTGACCACAATGCGCAGATaGGGTCTTGTCAACCTAGCGCCTCCCTCTCTCCTCCAACACCCT +
Preference number: 5 (lower is better)
Translates to: LSPQWRDSLVTTMRR*GLVNLAPPSLLQHP
Trigger: AGGGTGTTGGAGGAGAGAGGGAGGCGCTAGGTTGACAAGACCGCATCTGCGCATTGTGGTCACCAGCGAGTCTCTCCACTGAGGCGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 90 bp GACGGATCAGGGAATGCTGCCGTTCTCACCGGCCACGGCTGCAAATaGGACAGACATGTACCTGTCGCCTCAGTGGAGAGACTCGCTGGT +
Preference number: 5 (lower is better)
Translates to: DGSGNAAVLTGHGCK*DRHVPVASVERLAG
Trigger: ACCAGCGAGTCTCTCCACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGCCGTGGCCGGTGAGAACGGCAGCATTCCCTGATCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 90 bp CAAGCACAAGACAGTCCGAGCACTTACAGTAAGTGCAAGAGTTACTaGAGGGAGCGTGGCGGGTGTGGGAAGGGGGTGTCCCGCCACCAC +
Preference number: 5 (lower is better)
Translates to: QAQDSPSTYSKCKSY*RERGGCGKGVSRHH
Trigger: GTGGTGGCGGGACACCCCCTTCCCACACCCGCCACGCTCCCTGCAGTAACTCTTGCACTTACTGTAAGTGCTCGGACTGTCTTGTGCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 90 bp CTGCCTGGTGAGACCCTCAGCTATAGGACCATGTCTGACCGGGGCTaGATGGTGACAGTGTCACTAACCACGGTGAGCACAGCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: LPGETLSYRTMSDRG*MVTVSLTTVSTAAG
Trigger: ACCAGCGGCTGTGCTCACCGTGGTTAGTGACACTGTCACCATCCAGCCCCGGTCAGACATGGTCCTATAGCTGAGGGTCTCACCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp CCGGCCACGGCTGCAAATGCGACAGACATGTACCTGTCGCCTCAGTaGAGAGACTCGCTGGTGACCACAATGCGCAGATGCGGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: PATAANATDMYLSPQ*RDSLVTTMRRCGLV
Trigger: GACAAGACCGCATCTGCGCATTGTGGTCACCAGCGAGTCTCTCCACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGCCGTGGCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACACAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTQLLLC*PTILPT
Trigger: CGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTG...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGATGTCGGGGAACTGGTaGGCCAGGCACAGGAGGATC +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVMSGNW*ARHRRI
Trigger: GATCCTCCTGTGCCTGGCCAACCAGTTCCCCGACAT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGETLWKN*RMASAT
Trigger: CGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGT...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQATLWKN*RMASAT
Trigger: CGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGT...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVRSWIS*REKRRM
Trigger: CATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCTTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCFRAFS*AICRSW
Trigger: CCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAA...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGSFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGTCTTGGAGGGCAGGTaGAAGTGGCGAGCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHVLEGR*KWRAAR
Trigger: CCTGGCCGCTCGCCACTTCAACCTGCCCTCCAAGAC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTAGGTGTCGCAGTGGCTaGTGCGGCCCCGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLRCRSG*CGPGSG
Trigger: ACCTGAACCGGGGCCGCACAAGCCACTGCGACACCT...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCACAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GYMSRWSGEAKAPWEEQAQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...TGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGACACTCCCAAGGCCTaGGGCTATGGAAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVDTPKA*GYGSLH
Trigger: GTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTACGTTCCCACTGCCGTaGTACTCCCACCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEATFPLP*YSHPRG
Trigger: GCCCCTGGGGTGGGAGTACAACGGCAGTGGGAACGT...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCTTGGAGCCCTGGAGTaGATGCAGCAAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: WKVARCRGLQVALAGGQQLGALE*MQQDHV
Trigger: AACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCACCGTATATGAACCCAAATTaGAGGCAGGTGCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: GVSSALCCPRRQPSLGPPYMNPN*RQVLYC
Trigger: GCAATACAGCACCTGCCTCAAATTTGGGTTCATATA...CGGTGGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCAGGGAGGCCCAGCAACGGTATCCACTGACTTaGCTTCCTTGGTCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GPLPGLPLQMGTRREAQQRYPLT*LPWSQE
Trigger: TTCTTGGGACCAAGGAAGCAAAGTCAGTGGATACCG...TTGCTGGGCCTCCCTGCGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 90 bp CAGAAAACCACTCTACCCACTCCAGAGGCTGCACATTCATACACCTaGCCATACCCTCTCCTAGAGCCCTCAGCGCCCTCCTCCCACTCG +
Preference number: 5 (lower is better)
Translates to: QKTTLPTPEAAHSYT*PYPLLEPSAPSSHS
Trigger: CGAGTGGGAGGAGGGCGCTGAGGGCTCTAGGAGAGGGTATGGGCAGGTGTATGAATGTGCAGCCTCTGGAGTGGGTAGAGTGGTTTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp GATGGCAGCGTCCATCTTGTCTTTGTCCACGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCTGTGCTCGGGAGGAGGCCCTGGACT +
Preference number: 5 (lower is better)
Translates to: DGSVHLVFVHEAVVS*RVHSAAVLGRRPWT
Trigger: AGTCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAAAGACAAGATGGACGCTGCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS-3UTR CAA 90 bp CCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATA +
Preference number: 5 (lower is better)
Translates to: PCLPHGGFICSLLPEAAALSTKQ*YPGESI
Trigger: TATGGACTCTCCAGGATACAACTGCTTCGTGGACAA...GGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGATGGCAGCGTCCATCTaGTCTTTGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGMAASI*SLSTKQ
Trigger: CTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTCCGCAGGGCGTGGCTTaGGGCCCAGTAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSPQGVA*GPVALA
Trigger: CGCCAGGGCTACTGGGCCCAAAGCCACGCCCTGCGG...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACTGCTTGCCCACGATCTaGCCCACGATGTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDCLPTI*PTMSLY
Trigger: GTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCA...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCCTGGGCACCTGCGTGTaGTCCACGAACTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGLGTCV*STNSGS
Trigger: GCTGCCCGAGTTCGTGGACAACACGCAGGTGCCCAG...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFTLWKN*RMASAT
Trigger: CGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGT...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGCPALT*WKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCA...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCCAGCCAGCTTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QGCQSVLGIYAGIQSPASFRAFS*AICRSW
Trigger: CCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAA...GCTGGCTGGCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGTTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWFRAFS*AICRSW
Trigger: CCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAA...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCTGCACCACTGTGCGCCCAGTCAGAGGCTACATGAGCAGATGGTCAGGGGAGTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SCTTVRPVRGYMSRWSGESFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...CTCCCCTGACCATCTGCTCATGTAGCCTCTGACTGGGCGCACAGTGGTGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGTGGCTTGTGCGGCCCCGGTTCAGGTCCCCATCGATGTAGAGCGCCTGGCCGCCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: SGLCGPGSGPHRCRAPGRPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...GCGGCCAGGCGCTCTACATCGATGGGGACCTGAACCGGGGCCGCACAAGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AMEASTEEEGTSYASSGWQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...CCACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTCCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTCCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTTATATGAACCCAAATTaGAGGCAGGTGCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSYMNPN*RQVLYC
Trigger: GCAATACAGCACCTGCCTCAAATTTGGGTTCATATA...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp GGGTGGGGTCCGCCAGGGGGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTGCACTCCTGCTTCATTaGATAATTTCTCCACGCAAA +
Preference number: 5 (lower is better)
Translates to: GWGPPGGRPKGASLFSGSALLLH*IISPRK
Trigger: TTTGCGTGGAGAAATTATCAAATGAAGCAGGAGTGC...AGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCCCCCTGGCGGACCCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp AAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGGGACGGTATCCACTGACTTaGCTTCCTTGGTCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: KVARCRGLQVALAGGQQGRYPLT*LPWSQE
Trigger: TTCTTGGGACCAAGGAAGCAAAGTCAGTGGATACCG...TCCCTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGAAAGTGGCACGGTGCAGGGGACTCCAAGTGGCACTGGCTGGAGGCCAGCAGCGGTATCCACTGACTTaGCTTCCTTGGTCCCAAGAA +
Preference number: 5 (lower is better)
Translates to: WKVARCRGLQVALAGGQQRYPLT*LPWSQE
Trigger: TTCTTGGGACCAAGGAAGCAAAGTCAGTGGATACCG...CTGCTGGCCTCCAGCCAGTGCCACTTGGAGTCCCCTGCACCGTGCCACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 90 bp CAGTCCCCGGGCATTCCAGAAAACCACTCTACCCACTCCAGAGGCTaGACATTCATACACCTGCCCATACCCTCTCCTAGAGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: QSPGIPENHSTHSRG*TFIHLPIPSPRALS
Trigger: GCTGAGGGCTCTAGGAGAGGGTATGGGCAGGTGTATGAATGTGCAGCCTCTGGAGTGGGTAGAGTGGTTTTCTGGAATGCCCGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp AGACTTGCTCTAAGCAGTGGGGGTGGGGAACTGGGTAACAAGGCCTaGTCACCACTCCATCCCGATAGTGACAGGGCACCACCAGAGTAC +
Preference number: 5 (lower is better)
Translates to: RLALSSGGGELGNKA*SPLHPDSDRAPPEY
Trigger: GTACTCTGGTGGTGCCCTGTCACTATCGGGATGGAGTGGTGAGCAGGCCTTGTTACCCAGTTCCCCACCCCCACTGCTTAGAGCAAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp TTGTCCACGAAGCAGTTGTATCCTGGAGAGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGACTTTCCACCTGGGATGGTAGAAGT +
Preference number: 5 (lower is better)
Translates to: LSTKQLYPGESIAPL*SGGGPGLSTWDGRS
Trigger: ACTTCTACCATCCCAGGTGGAAAGTCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS CCA 90 bp GGGCTGGATGGTGACAGTGTCACTAACCACGGTGAGCACAGCCGCTaGTCTTCCCCCACACCTCCTTACCTTGCTATCTGCCTTTTACCC +
Preference number: 5 (lower is better)
Translates to: GLDGDSVTNHGEHSR*SSPTPPYLAICLLP
Trigger: GGGTAAAAGGCAGATAGCAAGGTAAGGAGGTGTGGGGGAAGACCAGCGGCTGTGCTCACCGTGGTTAGTGACACTGTCACCATCCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp CTCAGGGAAATCCTGGGAGGGACACTAGGGCCCAGGCATGAGGAGTaGCAAATAGCACGCGCAAAGGCCGGGAAACAGAGGCTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: LREILGGTLGPRHEE*QIARAKAGKQRLSV
Trigger: AACTGAAAGCCTCTGTTTCCCGGCCTTTGCGCGTGCTATTTGCCACTCCTCATGCCTGGGCCCTAGTGTCCCTCCCAGGATTTCCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 90 bp CTAGGCAGCAGTGTTCGGCGTTTCTTCTGCAGGCAGGTGGGCAGGTaGAGGACCCCATTGGCTCACAGGTGCTATAGTAGCCATTGGGTT +
Preference number: 5 (lower is better)
Translates to: LGSSVRRFFCRQVGR*RTPLAHRCYSSHWV
Trigger: AACCCAATGGCTACTATAGCACCTGTGAGCCAATGGGGTCCTCCACCTGCCCACCTGCCTGCAGAAGAAACGCCGAACACTGCTGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAACAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACG +
Preference number: 5 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQQLLLC*PTILPT
Trigger: CGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTG...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTAGGCACAGGAGGATCTaGCGCACGGCCCCCTCGCCG +
Preference number: 5 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSRHRRI*RTAPSP
Trigger: CGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGCCT...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAAAWQY*FTRSPN
Trigger: GTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGC...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTCPALT*WKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLRSWIS*REKRRM
Trigger: CATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGATTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ERLTENPDTWPATAPQEGFRAFS*AICRSW
Trigger: CCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAA...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGGGTCGGTCCCTGAGGGCCTCTCCCGGGGCTACCTCTTCAGATGGGAACACGCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: LGRSLRASPGATSSDGNTPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...CGTGTTCCCATCTGAAGAGGTAGCCCCGGGAGAGGCCCTCAGGGACCGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RGSQKTLTRGQPQHHKRDNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...GTCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACCCTGGAAATGGAGCTaGCTGGTCTGGGTCGGTCCC +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTPWKWS*LVWVGP
Trigger: GGGACCGACCCAGACCAGCAAGCTCCATTTCCAGGG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGGTGTGGCCCTCTGGAAGAGGCTaGCAGCATTCCAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: SRWSGEAKAPWEEQAMVWPSGRG*QHSSHR
Trigger: TCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGG...CCACACCATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCCCTCCCAAGAAAAGGTGTaGACAAATTCCATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: HGGFICSLLPEAAAQPRPSQEKV*TNSIVW
Trigger: CCAAACTATGGAATTTGTCAACACCTTTTCTTGGGA...GGGCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGTTCAGCAGGTTTTGGTaGAGTGACCAGACCACTCCG +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVFSRFW*SDQTTP
Trigger: CGGAGTGGTCTGGTCACTCAACCAAAACCTGCTGAA...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS GCA 90 bp CTGGCACAGTGGACCACGACGGAAGAGAGCCACTGGACTTGTCTGTaGACTCAGGTGTACCCGTTCTTTCTGGAACCTTCTCCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LAQWTTTEESHWTCL*TQVYPFFLEPSPEC
Trigger: GCACTCAGGAGAAGGTTCCAGAAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp AAACAAGACGGATCAGGGAATGCTGCCGTTCTCACCGGCCACGGCTaGAAATGCGACAGACATGTACCTGTCGCCTCAGTGGAGAGACTC +
Preference number: 5 (lower is better)
Translates to: KQDGSGNAAVLTGHG*KCDRHVPVASVERL
Trigger: GAGTCTCTCCACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGCCGTGGCCGGTGAGAACGGCAGCATTCCCTGATCCGTCTTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp TTCACCCCATCCCCCTGCGAGCCTCTCAACAGTCCTGTGAGGAGGACAGCAGGGTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATA +
Preference number: 5 (lower is better)
Translates to: FTPSPCEPLNSPVRRTAGLSTKQ*YPGESI
Trigger: TATGGACTCTCCAGGATACAACTGCTTCGTGGACAA...CCCTGCTGTCCTCCTCACAGGACTGTTGAGAGGCTCGCAGGGGGATGGGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGATGGCAGCGTCCATCTaGTCTTTGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVMAASI*SLSTKQ
Trigger: CTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTGCTTGCCCACGATCTaGCCCACGATGTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEACLPTI*PTMSLY
Trigger: GTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACAGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTAAWQY*FTRSPN
Trigger: GTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGC...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGGGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: EGNLQMVHGYDFPAPGGLTLWKN*RMASAT
Trigger: CGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGT...GAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGAAACCTACAAATGGTCCACGGATATGACTTCCCTGCTCCTGGAGGGCTCCCTTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: GNLQMVHGYDFPAPGGLPCPALT*WKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCA...AGGGAGCCCTCCAGGAGCAGGGAAGTCATATCCGTGGACCATTTGTAGGTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGTCCTTCTGCGTGGTCTaGATGAGCAAGAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMSFCVV*MSKRVG
Trigger: GCCTACCCTCTTGCTCATCAAGACCACGCAGAAGGA...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TACATGAGCAGATGGTCAGGGGAGGCTAAAGCCCCATGGGAGGAGCAGGCAATGAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: YMSRWSGEAKAPWEEQAMNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...CATTGCCTGCTCCTCCCATGGGGCTTTAGCCTCCCCTGACCATCTGCTCATGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTCAGAGGGGCTGGTTGTaGAAGGTGTCGCAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLQRGWL*KVSQWL
Trigger: AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTG...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCGCCACAAAGAGGGGCTaGGGCGTGACCCTGGGCCCC +
Preference number: 5 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFATKRG*GVTLGP
Trigger: GGGGCCCAGGGTCACGCCCAAGCCCCTCTTTGTGGC...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCCTTGGAGCCCTGGAGTaGATGCAGCAAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGLGALE*MQQDHV
Trigger: AACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAG...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGGACAGAGGGAGGACATGCATCCATGCAAGGTGGCCAAGGAGGTGCTGTGTGCTTGGAGCCCTGGAGTaGATGCAGCAAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: RDRGRTCIHARWPRRCCVLGALE*MQQDHV
Trigger: AACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAG...CACACAGCACCTCCTTGGCCACCTTGCATGGATGCATGTCCTCCCTCTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GACACTCCCAAGGCCTTGGGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCCCTCTGGAAGAGGCTaGCAGCATTCCAGTCATAGA +
Preference number: 5 (lower is better)
Translates to: DTPKALGYGSLHGGGRYFPSGRG*QHSSHR
Trigger: TCTATGACTGGAATGCTGCAAGCCTCTTCCAGAGGG...GAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCCCAAGGCCTTGGGAGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGAGGCAAGGCCTCCCCTGGCACCTACCTGCGTCTGGCCAGCGCAGGGCTCAGGATTGTGGGAGGCATTTaGTTTTTAGCAATGAATCAC +
Preference number: 5 (lower is better)
Translates to: RGKASPGTYLRLASAGLRIVGGI*FLAMNH
Trigger: GTGATTCATTGCTAAAAACAAAATGCCTCCCACAAT...CCTGAGCCCTGCGCTGGCCAGACGCAGGTAGGTGCCAGGGGAGGCCTTGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp CACATGGGGGTTTCATCTGCTCTCTGCTGCCCGAGGCGGCAGCCCAGCCTCGGCTCCCAAGAAAAGGTGTaGACAAATTCCATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: HMGVSSALCCPRRQPSLGSQEKV*TNSIVW
Trigger: CCAAACTATGGAATTTGTCAACACCTTTTCTTGGGA...GCCGAGGCTGGGCTGCCGCCTCGGGCAGCAGAGAGCAGATGAAACCCCCATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS TCA 90 bp CGCTCTGCACGCCCCGCTCAGGGACAATCTTGCCCAATTCTGGCCTaGGTGTGTGTCCTAATGTCAAGCACAAGACAGTCCGAGCACTTA +
Preference number: 5 (lower is better)
Translates to: RSARPAQGQSCPILA*VCVLMSSTRQSEHL
Trigger: TAAGTGCTCGGACTGTCTTGTGCTTGACATTAGGACACACACTCAGGCCAGAATTGGGCAAGATTGTCCCTGAGCGGGGCGTGCAGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 90 bp GTCTCTCATCTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTACAAACTGCCTCTTCTGCTTCACGGT +
Preference number: 5 (lower is better)
Translates to: VSHLPHADDLRAEVL*MDGQVYKLPLLLHG
Trigger: ACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS CCA 90 bp AGTTCCTGCAGTTCAGTGCAGCTCAGCTCCTTGGGCCCCAGGTCCTaGATGGCAGCGTCCATCTTGTCTTTGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: SSCSSVQLSSLGPRS*MAASILSLSTKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGCTGCCATCCAGGACCTGGGGCCCAAGGAGCTGAGCTGCACTGAACTGCAGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 90 bp CTCATCTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAACTGCCTCTTCTGCTTCACGGTGATG +
Preference number: 5 (lower is better)
Translates to: LISLTLTISERKFSA*TAKCTNCLFCFTVM
Trigger: CATCACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS CCA 90 bp CTGGGGTGGAGAGGTGAGATCAAGCTTTTATTCCAGAAAGATCTGTaGTGTGGCAGCCTGGAGGGCATGTGCAGAGGCCACAGCCATCAG +
Preference number: 5 (lower is better)
Translates to: LGWRGEIKLLFQKDL*CGSLEGMCRGHSHQ
Trigger: CTGATGGCTGTGGCCTCTGCACATGCCCTCCAGGCTGCCACACCACAGATCTTTCTGGAATAAAAGCTTGATCTCACCTCTCCACCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 90 bp GGAACAATGGAGCTGGCACAGTGGACCACGACGGAAGAGAGCCACTaGACTTGTCTGTGCACTCAGGTGTACCCGTTCTTTCTGGAACCT +
Preference number: 5 (lower is better)
Translates to: GTMELAQWTTTEESH*TCLCTQVYPFFLEP
Trigger: AGGTTCCAGAAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAGCTCCATTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATA +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKLSTKQ*YPGESI
Trigger: TATGGACTCTCCAGGATACAACTGCTTCGTGGACAA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCAGCTTGCCCAAAGCCACACAGGGTTCCCGGTCCTTCCTCCTGCACCACTGTGGCGTCCATCTTGTCTTaGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: SACPKPHRVPGPSSCTTVASILS*STKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGC...CACAGTGGTGCAGGAGGAAGGACCGGGAACCCTGTGTGGCTTTGGGCAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTGCTTGCCCACGATCTaGCCCACGATGTCGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGCLPTI*PTMSLY
Trigger: GTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCAAACTTATTTCTCTCACTCCAGTCTGTGGACAGGTAAGCACCACACACCTCACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTAC +
Preference number: 5 (lower is better)
Translates to: SKLISLTPVCGQVSTTHLTATIS*WAAWQY
Trigger: GTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT...GAGGTGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGAGAAATAAGTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACG +
Preference number: 5 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQTLWKN*RMASAT
Trigger: CGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACATCCCAGAACAGCCACTaGGGCCTCTGTGTCTCCCTT +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTSQNSH*GLCVSL
Trigger: AAGGGAGACACAGAGGCCCAAGTGGCTGTTCTGGGA...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS GCA 90 bp GCCAAGTGTACAAACTGCCTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AKCTNCLFCFTVMPF*FRAFSLAICRSWIS
Trigger: GGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGGCAGTTTGTACACTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS GCA 90 bp GACGGCCAAGTGTACAAACTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: DGQVYKLFCFTVMPF*FRAFSLAICRSWIS
Trigger: GGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGTTTGTACACTTGGCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS GCA 90 bp GTCTCTCATCTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTACAAACTCTTCTGCTTCACGGTGATG +
Preference number: 5 (lower is better)
Translates to: VSHLPHADDLRAEVL*MDGQVYKLFCFTVM
Trigger: CATCACCGTGAAGCAGAAGAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp CAGGGGCCCAAAGGCTGTAAGGTGAGAGGCTCACAGAAAACCCTGACACGTGGCGCGTCCATCTTGTCTTaGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: QGPKGCKVRGSQKTLTRGASILS*STKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGC...GCCACGTGTCAGGGTTTTCTGTGAGCCTCTCACCTTACAGCCTTTGGGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GGCTATGGAAGCCTCCACGGAGGAGGAAGGTACTTCCTATGCCAGCTCTGGGTGGCGTCCATCTTGTCTTaGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: GYGSLHGGGRYFLCQLWVASILS*STKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGC...CACCCAGAGCTGGCATAGGAAGTACCTTCCTCCTCCGTGGAGGCTTCCATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTATGGCAGCGTCCATCTaGTCTTTGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCMAASI*SLSTKQ
Trigger: CTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCTCTCACTCCAGTGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAAC +
Preference number: 5 (lower is better)
Translates to: LRSQRSPVCLQTYFSHSSAAWQY*FTRSPN
Trigger: GTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGC...ACTGGAGTGAGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTATCAAGGGTGGGGGCTaGGTCAGCTCGGGGTGCTTG +
Preference number: 5 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSIKGGG*VSSGCL
Trigger: CAAGCACCCCGAGCTGACCAAGCCCCCACCCTTGAT...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCAACATGGACTCGGTCTaGGAGGGCAGGTTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGNMDSV*EGRLKW
Trigger: CCACTTCAACCTGCCCTCCAAGACCGAGTCCATGTT...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ATGAGGAAGTTCTCGGAGCAGAGGGGCTGGTTGTTGAAGGTGTCGCAGTGGCTTCTTGGAGCCCTGGAGTaGATGCAGCAAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: MRKFSEQRGWLLKVSQWLLGALE*MQQDHV
Trigger: AACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAG...AAGCCACTGCGACACCTTCAACAACCAGCCCCTCTGCTCCGAGAACTTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000564879.2
ENST00000630263.2
CDS-3UTR CAA 90 bp GGCAGGCCCAAGGGTGCCAGTCTGTTCTCGGGATCTACGCTGGGATTCAGTCGCGCACTCCTGCTTCATTaGATAATTTCTCCACGCAAA +
Preference number: 5 (lower is better)
Translates to: GRPKGASLFSGSTLGFSRALLLH*IISPRK
Trigger: TTTGCGTGGAGAAATTATCAAATGAAGCAGGAGTGC...GCGACTGAATCCCAGCGTAGATCCCGAGAACAGACTGGCACCCTTGGGCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp AGGAGCAGGCAATGGTGTGGGGATGGAAAGTGGCACGGTGCAGGGGACTCCAAGTTTTGCCAGTTCATGTaGTCCGTGCCTTATCACAAG +
Preference number: 5 (lower is better)
Translates to: RSRQWCGDGKWHGAGDSKFCQFM*SVPYHK
Trigger: CTTGTGATAAGGCACGGACAACATGAACTGGCAAAA...CTTGGAGTCCCCTGCACCGTGCCACTTTCCATCCCCACACCATTGCCTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp CTGCCGTCCCCCAACCCTGCCTACCACATGGGGGTTTCATCTGCTCTCTGCTGCCAAATGCCAATGTTTTaGCCAGTTCATGTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: LPSPNPAYHMGVSSALCCQMPMF*PVHVVR
Trigger: ACGGACAACATGAACTGGCAAAAACATTGGCATTTG...GCAGCAGAGAGCAGATGAAACCCCCATGTGGTAGGCAGGGTTGGGGGACGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp GGTACCTGCCTCTGTGACCCAGGCTTCCATGGTCCCAGAACAGCCACTTGGGCCCAAATGCCAATGTTTTaGCCAGTTCATGTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: GTCLCDPGFHGPRTATWAQMPMF*PVHVVR
Trigger: ACGGACAACATGAACTGGCAAAAACATTGGCATTTG...GGCCCAAGTGGCTGTTCTGGGACCATGGAAGCCTGGGTCACAGAGGCAGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TGGGCCCCAGGTCATTGCAATGACAAAGAGGTGAAATGGGCAGCTGCAGAGGCTTTCAGCAGGTTTTGGTaGAGTGACCAGACCACTCCG +
Preference number: 5 (lower is better)
Translates to: WAPGHCNDKEVKWAAAEAFSRFW*SDQTTP
Trigger: CGGAGTGGTCTGGTCACTCAACCAAAACCTGCTGAA...AGCCTCTGCAGCTGCCCATTTCACCTCTTTGTCATTGCAATGACCTGGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000627285.1
ENST00000630263.2
CDS GCA 90 bp AAAGGCCAGGGAACACCTCATCCTGTCCTCCAAGAGTCTGCTGGATaGCTCAGAGACACAAATAAATCCCAGGCAGAGGCCCAAAGTGCA +
Preference number: 5 (lower is better)
Translates to: KGQGTPHPVLQESAG*LRDTNKSQAEAQSA
Trigger: TGCACTTTGGGCCTCTGCCTGGGATTTATTTGTGTCTCTGAGGCATCCAGCAGACTCTTGGAGGACAGGATGAGGTGTTCCCTGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 90 bp GGAGTGGGGAAATGCCATGGAACTGGAGGTGGTGGTTCCACAACATaGTCATTCATGCAACCACCACCTCTGTCTGGGGTCGTTCAAATG +
Preference number: 5 (lower is better)
Translates to: GVGKCHGTGGGGSTT*SFMQPPPLSGVVQM
Trigger: CATTTGAACGACCCCAGACAGAGGTGGTGGTTGCATGAATGAGCATGTTGTGGAACCACCACCTCCAGTTCCATGGCATTTCCCCACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp CCCATTTCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAATGGCAGCGTCCATCTaGTCTTTGTCCACGAAGCAG +
Preference number: 5 (lower is better)
Translates to: PISQLGKLSSRRVCQLAQMAASI*SLSTKQ
Trigger: CTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT...TTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp GAGAGGCTCACAGAAAACCCTGACACGTGGCCAGCCACAGCACCACAAGAGGGACCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: ERLTENPDTWPATAPQEGPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...TCCCTCTTGTGGTGCTGTGGCTGGCCACGTGTCAGGGTTTTCTGTGAGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTGACACTTGGAGCCCTGGAGTaGATGCAGCAAGACCATGTT +
Preference number: 5 (lower is better)
Translates to: QGGPAKASGSAETQGHVTLGALE*MQQDHV
Trigger: AACATGGTCTTGCTGCATCAACTCCAGGGCTCCAAG...TGTCACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp CACCACAGGCCCACCCTTAGCTGCACGTTCCCACTGCCGTTGTACTCCCACCCCATTGTGGGAGGCATTTaGTTTTTAGCAATGAATCAC +
Preference number: 5 (lower is better)
Translates to: HHRPTLSCTFPLPLYSHPIVGGI*FLAMNH
Trigger: GTGATTCATTGCTAAAAACAAAATGCCTCCCACAAT...GGGGTGGGAGTACAACGGCAGTGGGAACGTGCAGCTAAGGGTGGGCCTGTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 90 bp AAAAGAAAAATGAAACAGTTTCATGGCAGGCTAGAGGGAAGACTGTaGCCTGGACACCTGCCACAGACTAGGCCCGGAAAGCAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: KRKMKQFHGRLEGRL*PGHLPQTRPGKQPE
Trigger: CTCAGGCTGCTTTCCGGGCCTAGTCTGTGGCAGGTGTCCAGGGCACAGTCTTCCCTCTAGCCTGCCATGAAACTGTTTCATTTTTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 90 bp CTCATCTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAACTGCCTTTTAGAAAGTGACACACTC +
Preference number: 5 (lower is better)
Translates to: LISLTLTISERKFSA*TAKCTNCLLESDTL
Trigger: GAGTGTGTCACTTTCTAAAAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562105.2
ENST00000646147.1
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATA +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHLSTKQ*YPGESI
Trigger: TATGGACTCTCCAGGATACAACTGCTTCGTGGACAA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp ACCAGACCCTCAAGACGAGTTGAAGGAGGTCATGGGGCATGGAGGGAGGTCACATTTTGCCAGTTCATGTaGTCCGTGCCTTATCACAAG +
Preference number: 5 (lower is better)
Translates to: TRPSRRVEGGHGAWREVTFCQFM*SVPYHK
Trigger: CTTGTGATAAGGCACGGACAACATGAACTGGCAAAA...TGTGACCTCCCTCCATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp ATCATGACCCAGCAGCAATCCGTCTTCCTGGTCCAGATCACTGGAAGGCCCGGGCAAATGCCAATGTTTTaGCCAGTTCATGTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: IMTQQQSVFLVQITGRPGQMPMF*PVHVVR
Trigger: ACGGACAACATGAACTGGCAAAAACATTGGCATTTG...CCCGGGCCTTCCAGTGATCTGGACCAGGAAGACGGATTGCTGCTGGGTCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 90 bp CTTTTAGAAAGTGACACACTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: LLESDTLFCFTVMPF*FRAFSLAICRSWIS
Trigger: GGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGTGTGTCACTTTCTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562105.2
ENST00000646147.1
CDS CCA 90 bp TGCTCACCACTCCATCCCGATAGTGACAGGGCACCACCAGAGTACTaGGGTGGAGAGGTGAGATCAAGCTTTTATTCCAGAAAGATCTGT +
Preference number: 5 (lower is better)
Translates to: CSPLHPDSDRAPPEY*GGEVRSSFYSRKIC
Trigger: ACAGATCTTTCTGGAATAAAAGCTTGATCTCACCTCTCCACCCCAGTACTCTGGTGGTGCCCTGTCACTATCGGGATGGAGTGGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATA +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGLSTKQ*YPGESI
Trigger: TATGGACTCTCCAGGATACAACTGCTTCGTGGACAA...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS-3UTR CAA 90 bp AGACCATGTTTAATGAACACCAAAGCTGGCGGTACAGATGAGGGCCTCAGGGGCGCGTCCATCTTGTCTTaGTCCACGAAGCAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: RPCLMNTKAGGTDEGLRGASILS*STKQLY
Trigger: ATACAACTGCTTCGTGGACAAAGACAAGATGGACGC...GCCCCTGAGGCCCTCATCTGTACCGCCAGCTTTGGTGTTCATTAAACATGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000646147.1
CDS GCA 90 bp AATGCCATGGAACTGGAGGTGGTGGTTCCACAACATGCTCATTCATaGAACCACCACCTCTGTCTGGGGTCGTTCAAATGGTTGGATAGT +
Preference number: 5 (lower is better)
Translates to: NAMELEVVVPQHAHS*NHHLCLGSFKWLDS
Trigger: ACTATCCAACCATTTGAACGACCCCAGACAGAGGTGGTGGTTGCATGAATGAGCATGTTGTGGAACCACCACCTCCAGTTCCATGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS-3UTR CAA 90 bp ACACAAAGCATTCTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCGACCCTCAAGACGAGTaGAAGGAGGTCATGGGGCAT +
Preference number: 5 (lower is better)
Translates to: TQSILRSQRSPVCLQTYFDPQDE*KEVMGH
Trigger: ATGCCCCATGACCTCCTTCAACTCGTCTTGAGGGTC...GAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAGAATGCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp CACGCAGGGAGGCCCAGCAAAAGCTTCAGGCTCTGCAGAAACACAAGGACATGTTATATGAACCCAAATTaGAGGCAGGTGCTGTATTGC +
Preference number: 5 (lower is better)
Translates to: HAGRPSKSFRLCRNTRTCYMNPN*RQVLYC
Trigger: GCAATACAGCACCTGCCTCAAATTTGGGTTCATATA...ACATGTCCTTGTGTTTCTGCAGAGCCTGAAGCTTTTGCTGGGCCTCCCTGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACGCACTCCTGCTTCATTaGATAATTTCTCCACGCAAA +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHALLLH*IISPRK
Trigger: TTTGCGTGGAGAAATTATCAAATGAAGCAGGAGTGC...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp CTCCGGTCCCAAAGAAGCCCAGTTTGCCTCCAAACTTATTTCTCTCACTCCAGTCCACTCCGGTTTCTCTaGCAGCTAGAACATTCACCT +
Preference number: 5 (lower is better)
Translates to: LRSQRSPVCLQTYFSHSSPLRFL*QLEHSP
Trigger: AGGTGAATGTTCTAGCTGCAAGAGAAACCGGAGTGG...ACTGGAGTGAGAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGGGACCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACTCCCAAGAAAAGGTGTaGACAAATTCCATAGTTTGG +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHSQEKV*TNSIVW
Trigger: CCAAACTATGGAATTTGTCAACACCTTTTCTTGGGA...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TCACAGCTGGGGAAACTGAGTTCCAGACGGGTTTGTCAGCTTGCCCAAAGCCACATTGTGGGAGGCATTTaGTTTTTAGCAATGAATCAC +
Preference number: 5 (lower is better)
Translates to: SQLGKLSSRRVCQLAQSHIVGGI*FLAMNH
Trigger: GTGATTCATTGCTAAAAACAAAATGCCTCCCACAAT...GTGGCTTTGGGCAAGCTGACAAACCCGTCTGGAACTCAGTTTCCCCAGCTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS TCA 90 bp GCTATCAGTCAACACCAGCGCACAGAAAGAGCACCACGGAGATTCTaGGGATTTCAGGAGTTGTATGTCACTAAACAAGGACAAAGACCA +
Preference number: 5 (lower is better)
Translates to: AISQHQRTERAPRRF*GFQELYVTKQGQRP
Trigger: TGGTCTTTGTCCTTGTTTAGTGACATACAACTCCTGAAATCCTCAGAATCTCCGTGGTGCTCTTTCTGTGCGCTGGTGTTGACTGATAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS-3UTR CAA 90 bp GTTTTGATATTGACTTGGGGGAAGGTGAGGGTACATGGAAACCCTGTACCGTCTTTTTGCCAGTTCATGTaGTCCGTGCCTTATCACAAG +
Preference number: 5 (lower is better)
Translates to: VLILTWGKVRVHGNPVPSFCQFM*SVPYHK
Trigger: CTTGTGATAAGGCACGGACAACATGAACTGGCAAAA...AGACGGTACAGGGTTTCCATGTACCCTCACCTTCCCCCAAGTCAATATCAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS-3UTR CAA 90 bp TCCCTTCTATCCTTAGCTCATAAGCATTTGACCAAATGCCAATGTTTTTGCCAGCCAAAGAAGCCCAGTTaGCCTCCAAACTTATTTCTC +
Preference number: 5 (lower is better)
Translates to: SLLSLAHKHLTKCQCFCQPKKPS*PPNLFL
Trigger: GAGAAATAAGTTTGGAGGCAAACTGGGCTTCTTTGG...CTGGCAAAAACATTGGCATTTGGTCAAATGCTTATGAGCTAAGGATAGAAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000564879.2
ENST00000567020.6
ENST00000646147.1
CDS GCA 72 bp AGAACGGCCGAGGGGAGAGGGAGAAGTCCTGCCGCCTaGTCAGCGGTTTCCAGTGGCCCAGCCCCCGGTGCC +
Preference number: 6 (lower is better)
Translates to: RTAEGRGRSPAA*SAVSSGPAPGA
Trigger: GGCACCGGGGGCTGGGCCACTGGAAACCGCTGAGCAGGCGGCAGGACTTCTCCCTCTCCCCTCGGCCGTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp CGCCTGCTCAGCGGTTTCCAGTGGCCCAGCCCCCGGTaGCACCTGGCATCCTTCGCAGCACTCCTCACCGAC +
Preference number: 6 (lower is better)
Translates to: RLLSGFQWPSPR*HLASFAALLTD
Trigger: GTCGGTGAGGAGTGCTGCGAAGGATGCCAGGTGGCACCGGGGGCTGGGCCACTGGAAACCGCTGAGCAGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp AGGCACGAGAACGGCCGAGGGGAGAGGGAGAAGTCCTaGCGCCTGCTCAGCGGTTTCCAGTGGCCCAGCCCC +
Preference number: 6 (lower is better)
Translates to: RHENGRGEREKS*RLLSGFQWPSP
Trigger: GGGGCTGGGCCACTGGAAACCGCTGAGCAGGCGGCAGGACTTCTCCCTCTCCCCTCGGCCGTTCTCGTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp GTGACCGTGCGGCAGGGAATGTCCCGGATCAGGCGCTaGTACACCTTTCCCCGCAGGGCGTGGCTTTGGGCC +
Preference number: 6 (lower is better)
Translates to: VTVRQGMSRIRR*YTFPRRAWLWA
Trigger: GGCCCAAAGCCACGCCCTGCGGGGAAAGGTGTACCAGCGCCTGATCCGGGACATTCCCTGCCGCACGGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp GAGGGCCCCCAGCAGCCTCGGTCTCACTGGAGGAACTaGACAGGGAGGGGGCATCTGTGCAGGGCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: EGPQQPRSHWRN*TGRGHLCRAQP
Trigger: AGGCTGAGCCCTGCACAGATGCCCCCTCCCTGTCCAGTTCCTCCAGTGAGACCGAGGCTGCTGGGGGCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 72 bp ACGCTGTCCGACTCCAGCGGCTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATGGCCAGCGCCACGCGG +
Preference number: 6 (lower is better)
Translates to: TLSDSSGCPALT*WKNLRMASATR
Trigger: CCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 72 bp TGCCCACGATGTCGCTGTACACGCTGGCGTCAGGCGTaGCCGTGCGGCAGGGAATGTCCCGGATCAGGCGCT +
Preference number: 6 (lower is better)
Translates to: CPRCRCTRWRQA*PCGRECPGSGA
Trigger: AGCGCCTGATCCGGGACATTCCCTGCCGCACGGTCACGCCTGACGCCAGCGTGTACAGCGACATCGTGGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp GCACAGGAGGATCTTGCGCACGGCCCCCTCGCCGCGTaGATTCAGGCAGTAGCTGGGCACCTGCGTGTTGTC +
Preference number: 6 (lower is better)
Translates to: AQEDLAHGPLAA*IQAVAGHLRVV
Trigger: GACAACACGCAGGTGCCCAGCTACTGCCTGAATGCACGCGGCGAGGGGGCCGTGCGCAAGATCCTCCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp CGATCAGCCTCCTGCCGGGGTCATTGCAGGCCAGGATaGGGCAGGCCTTCTCGAAGCACTCGGCCTCGTCGA +
Preference number: 6 (lower is better)
Translates to: RSASCRGHCRPG*GRPSRSTRPRR
Trigger: TCGACGAGGCCGAGTGCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp TCAGCGGTTTCCAGTGGCCCAGCCCCCGGTGCCACCTaGCATCCTTCGCAGCACTCCTCACCGACACCCTCT +
Preference number: 6 (lower is better)
Translates to: SAVSSGPAPGAT*HPSQHSSPTPS
Trigger: AGAGGGTGTCGGTGAGGAGTGCTGCGAAGGATGCCAGGTGGCACCGGGGGCTGGGCCACTGGAAACCGCTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 90 bp AACTCGGGCAGCGGCAGGCAGCTGCTGCTGTGCTTGCCCACGATCTaGCCCACGATGTCGCTGTACACGCTGGCGTCAGGCGTGACCGTG +
Preference number: 6 (lower is better)
Translates to: NSGSGRQLLLCLPTI*PTMSLYTLASGVTV
Trigger: CACGGTCACGCCTGACGCCAGCGTGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp TCCTGCTTCACGCTGTCCGACTCCAGCGGCTGCCCGGCCCTCACCTaGTGGAAGAACTTGAGGATGGCCAGCGCCACGCGGTACAGCACC +
Preference number: 6 (lower is better)
Translates to: SCFTLSDSSGCPALT*WKNLRMASATRYST
Trigger: GGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 72 bp CCAGCGGCTGCCCGGCCCTCACCTTGTGGAAGAACTTaGGGATGGCCAGCGCCACGCGGTACAGCACCTTGT +
Preference number: 6 (lower is better)
Translates to: PAAARPSPCGRT*GWPAPRGTAPC
Trigger: ACAAGGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp GTCTTCGCGATGTCTCTGACGAACGTGCGGATGTCCTaGTTCACGCTGTCCGACTCCAGCGGCTGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: VFAMSLTNVRMS*FTLSDSSGCPA
Trigger: GGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCAGGACATCCGCACGTTCGTCAGAGACATCGCGAAGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp CTCCTCACCGACACCCTCTCCTCTCCAGCTCACAGCTaGCCCGTCCCACCCACTCTACCCCAAGAAAGGGGG +
Preference number: 6 (lower is better)
Translates to: LLTDTLSSPAHS*PVPPTLPQERG
Trigger: CCCCCTTTCTTGGGGTAGAGTGGGTGGGACGGGGCAGCTGTGAGCTGGAGAGGAGAGGGTGTCGGTGAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp TCCAGCGGCTGCCCGGCCCTCACCTTGTGGAAGAACTaGAGGATGGCCAGCGCCACGCGGTACAGCACCTTG +
Preference number: 6 (lower is better)
Translates to: SSGCPALTLWKN*RMASATRYSTL
Trigger: CAAGGTGCTGTACCGCGTGGCGCTGGCCATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp TCAAAGGCCAGGAAGCTCTGGTCGATCAGCCTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAGGCCTTCTCGAAGCACTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: SKARKLWSISLLPGS*QARMRQAFSKHSAS
Trigger: CGAGGCCGAGTGCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp AAGCAGTTGTATCCTGGAGAGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGACTGCCGGAAGGGGAG +
Preference number: 6 (lower is better)
Translates to: KQLYPGESIAPL*SGGGPGLPEGE
Trigger: CTCCCCTTCCGGCAGTCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp GGAAGCTCTGGTCGATCAGCCTCCTGCCGGGGTCATTaGAGGCCAGGATGCGGCAGGCCTTCTCGAAGCACT +
Preference number: 6 (lower is better)
Translates to: GSSGRSASCRGH*RPGCGRPSRST
Trigger: AGTGCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp ACTCAAAGGCCAGGAAGCTCTGGTCGATCAGCCTCCTaGCGGGGTCATTGCAGGCCAGGATGCGGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: TQRPGSSGRSAS*RGHCRPGCGRP
Trigger: AGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 72 bp AGGAAGCTCTGGTCGATCAGCCTCCTGCCGGGGTCATaGCAGGCCAGGATGCGGCAGGCCTTCTCGAAGCAC +
Preference number: 6 (lower is better)
Translates to: RKLWSISLLPGS*QARMRQAFSKH
Trigger: GTGCTTCGAGAAGGCCTGCCGCATCCTGGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp GTGTTGTCCACGAACTCGGGCAGCGGCAGGCAGCTGCTGCTGTGCTaGCCCACGATCTTGCCCACGATGTCGCTGTACACGCTGGCGTCA +
Preference number: 6 (lower is better)
Translates to: VLSTNSGSGRQLLLC*PTILPTMSLYTLAS
Trigger: TGACGCCAGCGTGTACAGCGACATCGTGGGCAAGATCGTGGGCAAGCACAGCAGCAGCTGCCTGCCGCTGCCCGAGTTCGTGGACAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp AAGCTTTCAGGGTTGATGGAAAAGGGCCTGAGTGGGCCCTCCTCTTaGAGGACCCAGTGGGGTGGGCAGGGAGTCCAGCCGGCCCTGACC +
Preference number: 6 (lower is better)
Translates to: KLSGLMEKGLSGPSS*RTQWGGQGVQPALT
Trigger: GGTCAGGGCCGGCTGGACTCCCTGCCCACCCCACTGGGTCCTCAAAGAGGAGGGCCCACTCAGGCCCTTTTCCATCAACCCTGAAAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp CGGATGTCCTGCTTCACGCTGTCCGACTCCAGCGGCTaGCCGGCCCTCACCTTGTGGAAGAACTTGAGGATG +
Preference number: 6 (lower is better)
Translates to: RMSCFTLSDSSG*PALTLWKNLRM
Trigger: CATCCTCAAGTTCTTCCACAAGGTGAGGGCCGGGCAGCCGCTGGAGTCGGACAGCGTGAAGCAGGACATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp TGCAGGACATCCTCCGACACGGCCACCATCAGCTTGTaGGCCGCCTGGCAGTACTTGTTCACCAGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: CRTSSDTATISL*AAWQYLFTRSP
Trigger: TGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGTGTCGGAGGATGTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 72 bp ACCTGCAGGACATCCTCCGACACGGCCACCATCAGCTaGTGGGCCGCCTGGCAGTACTTGTTCACCAGGTCC +
Preference number: 6 (lower is better)
Translates to: TCRTSSDTATIS*WAAWQYLFTRS
Trigger: GGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGTGTCGGAGGATGTCCTGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp TCCTCCGACACGGCCACCATCAGCTTGTGGGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAACGTCATGCAGGACGACTCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: SSDTATISLWAAWQY*FTRSPNVMQDDSKA
Trigger: GGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGTGTCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 72 bp GCAGCTTCTCAGGGGACACCGTCTTCGCGATGTCTCTaGCGAACGTGCGGATGTCCTGCTTCACGCTGTCCG +
Preference number: 6 (lower is better)
Translates to: AASQGTPSSRCL*RTCGCPASRCP
Trigger: CGGACAGCGTGAAGCAGGACATCCGCACGTTCGTCAGAGACATCGCGAAGACGGTGTCCCCTGAGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS TCA 72 bp CCTGTCTCAGCCATATGGATAAACTGCACGAGGAAGTaGGCCCGAGGCACGAGAACGGCCGAGGGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: PVSAIWINCTRK*ARGTRTAEGRG
Trigger: CCCTCTCCCCTCGGCCGTTCTCGTGCCTCGGGCTCACTTCCTCGTGCAGTTTATCCATATGGCTGAGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS TCA 72 bp GGCTGGGGGACCTTCCTTGCAAGTCCACGCCAAGTCTaGTTTCTTCATGAGGGGCCCAGGCCTCCCACCTAC +
Preference number: 6 (lower is better)
Translates to: GWGTFLASPRQV*FLHEGPRPPTY
Trigger: GTAGGTGGGAGGCCTGGGCCCCTCATGAAGAAATCAGACTTGGCGTGGACTTGCAAGGAAGGTCCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp GAGACCTTTAGGGTGAGGTACGGGAGAGGGACACGGTaGTGCCCTCCAGGCACTCCCTCCTATTCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: ETFRVRYGRGTR*CPPGTPSYSAV
Trigger: GACAGCTGAATAGGAGGGAGTGCCTGGAGGGCAGCACCGTGTCCCTCTCCCGTACCTCACCCTAAAGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp CTAGCAGACCAGGAGGCCTCTCAGACCCGGGACAGGTaGTGCCCCAACAGTCCCCTGAAGGTACTGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LADQEASQTRDR*CPNSPLKVLKE
Trigger: TTCCTTCAGTACCTTCAGGGGACTGTTGGGGCAGCACCTGTCCCGGGTCTGAGAGGCCTCCTGGTCTGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp AACGTCATGCAGGACGACTCAAAGGCCAGGAAGCTCTaGTCGATCAGCCTCCTGCCGGGGTCATTGCAGGCC +
Preference number: 6 (lower is better)
Translates to: NVMQDDSKARKL*SISLLPGSLQA
Trigger: GGCCTGCAATGACCCCGGCAGGAGGCTGATCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCATGACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp TCCTCCGACACGGCCACCATCAGCTTGTGGGCCGCCTaGCAGTACTTGTTCACCAGGTCCCCAAACGTCATG +
Preference number: 6 (lower is better)
Translates to: SSDTATISLWAA*QYLFTRSPNVM
Trigger: CATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGTGTCGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp AGGAGAATGACCACCAGGGGTCTGCTGCATGTAGGGTaGCCACCCCCTGGTCCTCCCATGCAGAATGTCAGG +
Preference number: 6 (lower is better)
Translates to: RRMTTRGLLHVG*PPPGPPMQNVR
Trigger: CCTGACATTCTGCATGGGAGGACCAGGGGGTGGCCACCCTACATGCAGCAGACCCCTGGTGGTCATTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp TTCTTCATGAGGGGCCCAGGCCTCCCACCTACGTGCTaGGAAAGGCCAGGGAACACCTCATCCTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: FFMRGPGLPPTC*ERPGNTSSCPP
Trigger: TGGAGGACAGGATGAGGTGTTCCCTGGCCTTTCCCAGCACGTAGGTGGGAGGCCTGGGCCCCTCATGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp ATCCTGGGAGGGACACTAGGGCCCAGGCATGAGGAGTaGCAAATAGCACGCGCAAAGGCCGGGAAACAGAGG +
Preference number: 6 (lower is better)
Translates to: ILGGTLGPRHEE*QIARAKAGKQR
Trigger: CCTCTGTTTCCCGGCCTTTGCGCGTGCTATTTGCCACTCCTCATGCCTGGGCCCTAGTGTCCCTCCCAGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 72 bp ACGGCCACCATCAGCTTGTGGGCCGCCTGGCAGTACTaGTTCACCAGGTCCCCAAACGTCATGCAGGACGAC +
Preference number: 6 (lower is better)
Translates to: TATISLWAAWQY*FTRSPNVMQDD
Trigger: GTCGTCCTGCATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGGCGGCCCACAAGCTGATGGTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp ACTCTACCCACTCCAGAGGCTGCACATTCATACACCTaGCCATACCCTCTCCTAGAGCCCTCAGCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: TLPTPEAAHSYT*PYPLLEPSAPS
Trigger: GGAGGGCGCTGAGGGCTCTAGGAGAGGGTATGGGCAGGTGTATGAATGTGCAGCCTCTGGAGTGGGTAGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp AGAATGCTCCTCTGGCGATCCCATTCCCCTGACCTGTaGCCCCACTGCCTGGTGAGACCCTCAGCTATAGGA +
Preference number: 6 (lower is better)
Translates to: RMLLWRSHSPDL*PHCLVRPSAIG
Trigger: TCCTATAGCTGAGGGTCTCACCAGGCAGTGGGGGCACAGGTCAGGGGAATGGGATCGCCAGAGGAGCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp AAGCAGTTGTATCCTGGAGAGTCCATAGCGCCGCTGTaGTCGGGAGGAGGCCCTGGACTTTCCACCTGGGAT +
Preference number: 6 (lower is better)
Translates to: KQLYPGESIAPL*SGGGPGLSTWD
Trigger: ATCCCAGGTGGAAAGTCCAGGGCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS GCA 72 bp CAGTGGAGAGACTCGCTGGTGACCACAATGCGCAGATaGGGTCTTGTCAACCTAGCGCCTCCCTCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: QWRDSLVTTMRR*GLVNLAPPSLL
Trigger: GAGGAGAGAGGGAGGCGCTAGGTTGACAAGACCGCATCTGCGCATTGTGGTCACCAGCGAGTCTCTCCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp GGGAATGCTGCCGTTCTCACCGGCCACGGCTGCAAATaGGACAGACATGTACCTGTCGCCTCAGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: GNAAVLTGHGCK*DRHVPVASVER
Trigger: TCTCTCCACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGCCGTGGCCGGTGAGAACGGCAGCATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp GGATCAGGGAATGCTGCCGTTCTCACCGGCCACGGCTaGAAATGCGACAGACATGTACCTGTCGCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: GSGNAAVLTGHG*KCDRHVPVASV
Trigger: CACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGCCGTGGCCGGTGAGAACGGCAGCATTCCCTGATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp GACAGTCCGAGCACTTACAGTAAGTGCAAGAGTTACTaGAGGGAGCGTGGCGGGTGTGGGAAGGGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: DSPSTYSKCKSY*RERGGCGKGVS
Trigger: GGACACCCCCTTCCCACACCCGCCACGCTCCCTGCAGTAACTCTTGCACTTACTGTAAGTGCTCGGACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp CTAGGCCTCAGCCCTGGAACAATGGAGCTGGCACAGTaGACCACGACGGAAGAGAGCCACTGGACTTGTCTG +
Preference number: 6 (lower is better)
Translates to: LGLSPGTMELAQ*TTTEESHWTCL
Trigger: CAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAGCTCCATTGTTCCAGGGCTGAGGCCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp GAGGGGATGACGCCTCCTCCGGCTGGGGGACCTTCCTaGCAAGTCCACGCCAAGTCTGATTTCTTCATGAGG +
Preference number: 6 (lower is better)
Translates to: EGMTPPPAGGPS*QVHAKSDFFMR
Trigger: CCTCATGAAGAAATCAGACTTGGCGTGGACTTGCAAGGAAGGTCCCCCAGCCGGAGGAGGCGTCATCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp GCCAGAGCGCTCTGCACGCCCCGCTCAGGGACAATCTaGCCCAATTCTGGCCTGAGTGTGTGTCCTAATGTC +
Preference number: 6 (lower is better)
Translates to: ARALCTPRSGTI*PNSGLSVCPNV
Trigger: GACATTAGGACACACACTCAGGCCAGAATTGGGCAAGATTGTCCCTGAGCGGGGCGTGCAGAGCGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 90 bp AGGTCCTGGATGGCAGCGTCCATCTTGTCTTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATAGCGCCGCTGTGCTCGGGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RSWMAASILSLSTKQ*YPGESIAPLCSGGG
Trigger: GCCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAAAGACAAGATGGACGCTGCCATCCAGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 90 bp ACCTCCCAGGCCAGAGCGCTCTGCACGCCCCGCTCAGGGACAATCTaGCCCAATTCTGGCCTGAGTGTGTGTCCTAATGTCAAGCACAAG +
Preference number: 6 (lower is better)
Translates to: TSQARALCTPRSGTI*PNSGLSVCPNVKHK
Trigger: CTTGTGCTTGACATTAGGACACACACTCAGGCCAGAATTGGGCAAGATTGTCCCTGAGCGGGGCGTGCAGAGCGCTCTGGCCTGGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 90 bp TGCTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATGGCGAACGCTTTCTCCAGCAGCTTC +
Preference number: 6 (lower is better)
Translates to: CFRAFSLAICRSWIS*REKRRMANAFSSSF
Trigger: GAAGCTGCTGGAGAAAGCGTTCGCCATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp CAGCGCACACCAACCCACAGGGGCTTCAGTTCATTCTaGAGTGCTAGGCACTCCTGCCCCTTGAGACTGACA +
Preference number: 6 (lower is better)
Translates to: QRTPTHRGFSSF*SARHSCPLRLT
Trigger: TGTCAGTCTCAAGGGGCAGGAGTGCCTAGCACTGCAGAATGAACTGAAGCCCCTGTGGGTTGGTGTGCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp TGCTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGCTaGATCTCCTTGCGGGAGAAGAGGCGGATGGCGAAC +
Preference number: 6 (lower is better)
Translates to: CFRAFSLAICRS*ISLREKRRMAN
Trigger: GTTCGCCATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp GGTGACAGTGTCACTAACCACGGTGAGCACAGCCGCTaGTCTTCCCCCACACCTCCTTACCTTGCTATCTGC +
Preference number: 6 (lower is better)
Translates to: GDSVTNHGEHSR*SSPTPPYLAIC
Trigger: GCAGATAGCAAGGTAAGGAGGTGTGGGGGAAGACCAGCGGCTGTGCTCACCGTGGTTAGTGACACTGTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp GCTTTCTCATTGGCCATCTGCAGGAGCTGGATCTCCTaGCGGGAGAAGAGGCGGATGGCGAACGCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: AFSLAICRSWIS*REKRRMANAFS
Trigger: GGAGAAAGCGTTCGCCATCCGCCTCTTCTCCCGCAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp CCTGGCAGTACTTGTTCACCAGGTCCCCAAACGTCATaGAGGACGACTCAAAGGCCAGGAAGCTCTGGTCGA +
Preference number: 6 (lower is better)
Translates to: PGSTCSPGPQTS*RTTQRPGSSGR
Trigger: TCGACCAGAGCTTCCTGGCCTTTGAGTCGTCCTGCATGACGTTTGGGGACCTGGTGAACAAGTACTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp CTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTACAAACTGCCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: LPHADDLRAEVL*MDGQVYKLPLL
Trigger: CAGAAGAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS GCA 72 bp TTGGACACAAACTTCCAAATGACCAGGGCCGGGGGCTaGACCTGCACCACGACCAGGTTTTTCAGAACGGGT +
Preference number: 6 (lower is better)
Translates to: LDTNFQMTRAGG*TCTTTRFFRTG
Trigger: ACCCGTTCTGAAAAACCTGGTCGTGGTGCAGGTGCAGCCCCCGGCCCTGGTCATTTGGAAGTTTGTGTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp GTCCATCTTGTCTTTGTCCACGAAGCAGTTGTATCCTaGAGAGTCCATAGCGCCGCTGTGCTCGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: VHLVFVHEAVVS*RVHSAAVLGRR
Trigger: CCTCCTCCCGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAAAGACAAGATGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CCA 72 bp GAGCTGGCACAGTGGACCACGACGGAAGAGAGCCACTaGACTTGTCTGTGCACTCAGGTGTACCCGTTCTTT +
Preference number: 6 (lower is better)
Translates to: ELAQWTTTEESH*TCLCTQVYPFF
Trigger: AAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp GCTGCAAATGCGACAGACATGTACCTGTCGCCTCAGTaGAGAGACTCGCTGGTGACCACAATGCGCAGATGC +
Preference number: 6 (lower is better)
Translates to: AANATDMYLSPQ*RDSLVTTMRRC
Trigger: GCATCTGCGCATTGTGGTCACCAGCGAGTCTCTCCACTGAGGCGACAGGTACATGTCTGTCGCATTTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp GGGGGACAAGGGAAGGAGGTGCTGGGACTAGCTCGGTaGGTCGCAGAAGAGGTGATCTCTGAATTAGGACTT +
Preference number: 6 (lower is better)
Translates to: GGQGKEVLGLAR*VAEEVISELGL
Trigger: AAGTCCTAATTCAGAGATCACCTCTTCTGCGACCCACCGAGCTAGTCCCAGCACCTCCTTCCCTTGTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 72 bp TTCACGGTGATGCCCTTCTGCTTCAGGGCTTTCTCATaGGCCATCTGCAGGAGCTGGATCTCCTTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: FTVMPFCFRAFS*AICRSWISLRE
Trigger: CTCCCGCAAGGAGATCCAGCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS CAA 72 bp GGCACAGTGGACCACGACGGAAGAGAGCCACTGGACTaGTCTGTGCACTCAGGTGTACCCGTTCTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: GTVDHDGREPLD*SVHSGVPVLSG
Trigger: TCCAGAAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 90 bp AATGGAGCTGGCACAGTGGACCACGACGGAAGAGAGCCACTGGACTaGTCTGTGCACTCAGGTGTACCCGTTCTTTCTGGAACCTTCTCC +
Preference number: 6 (lower is better)
Translates to: NGAGTVDHDGREPLD*SVHSGVPVLSGTFS
Trigger: GGAGAAGGTTCCAGAAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCACTGTGCCAGCTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS TCA 72 bp CGCCCCGCTCAGGGACAATCTTGCCCAATTCTGGCCTaGGTGTGTGTCCTAATGTCAAGCACAAGACAGTCC +
Preference number: 6 (lower is better)
Translates to: RPAQGQSCPILA*VCVLMSSTRQS
Trigger: GGACTGTCTTGTGCTTGACATTAGGACACACACTCAGGCCAGAATTGGGCAAGATTGTCCCTGAGCGGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp AGGGGCTTCAGTTCATTCTGCAGTGCTAGGCACTCCTaGCCCTTGAGACTGACAGTCTTTAGGACAGGGGGT +
Preference number: 6 (lower is better)
Translates to: RGFSSFCSARHS*PLRLTVFRTGG
Trigger: ACCCCCTGTCCTAAAGACTGTCAGTCTCAAGGGGCAGGAGTGCCTAGCACTGCAGAATGAACTGAAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp TGTCAAGCACAAGACAGTCCGAGCACTTACAGTAAGTaGAAGAGTTACTGCAGGGAGCGTGGCGGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: CQAQDSPSTYSK*KSYCRERGGCG
Trigger: CCCACACCCGCCACGCTCCCTGCAGTAACTCTTGCACTTACTGTAAGTGCTCGGACTGTCTTGTGCTTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp ATGAAACAGTTTCATGGCAGGCTAGAGGGAAGACTGTaGCCTGGACACCTGCCACAGACTAGGCCCGGAAAG +
Preference number: 6 (lower is better)
Translates to: MKQFHGRLEGRL*PGHLPQTRPGK
Trigger: CTTTCCGGGCCTAGTCTGTGGCAGGTGTCCAGGGCACAGTCTTCCCTCTAGCCTGCCATGAAACTGTTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp CTCACGCTGACGATCTCCGAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAACTGCCTCTTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LTLTISERKFSA*TAKCTNCLFCF
Trigger: GAAGCAGAAGAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS CCA 72 bp CTCACGCTGACGATCTCCGAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAACTCTTCTGCTTCACGG +
Preference number: 6 (lower is better)
Translates to: LTLTISERKFSA*TAKCTNSSASR
Trigger: CCGTGAAGCAGAAGAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS CAA 72 bp ATGGCAGCGTCCATCTTGTCTTTGTCCACGAAGCAGTaGTATCCTGGAGAGTCCATAGCGCCGCTGTGCTCG +
Preference number: 6 (lower is better)
Translates to: MAASILSLSTKQ*YPGESIAPLCS
Trigger: CGAGCACAGCGGCGCTATGGACTCTCCAGGATACAACTGCTTCGTGGACAAAGACAAGATGGACGCTGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000562105.2
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000630263.2
ENST00000643767.1
ENST00000646147.1
CDS GCA 72 bp AGTGACACACTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SDTLFCFTVMPF*FRAFSLAICRS
Trigger: GCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGTGTGTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000562105.2
ENST00000646147.1
CDS GCA 72 bp CTCCCTCACGCTGACGATCTCCGAGCGGAAGTTCTCTaGATGGACGGCCAAGTGTACAAACTGCCTTTTAGA +
Preference number: 6 (lower is better)
Translates to: LPHADDLRAEVL*MDGQVYKLPFR
Trigger: TCTAAAAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562105.2
ENST00000646147.1
CDS GCA 72 bp ACAAACTGCCTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: TNCLFCFTVMPF*FRAFSLAICRS
Trigger: GCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGGCAGTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000567020.6
ENST00000569874.2
ENST00000627285.1
ENST00000643767.1
CDS GCA 72 bp TGGACCACGACGGAAGAGAGCCACTGGACTTGTCTGTaGACTCAGGTGTACCCGTTCTTTCTGGAACCTTCT +
Preference number: 6 (lower is better)
Translates to: WTTTEESHWTCL*TQVYPFFLEPS
Trigger: AGAAGGTTCCAGAAAGAACGGGTACACCTGAGTGCACAGACAAGTCCAGTGGCTCTCTTCCGTCGTGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp GGCCCCTGCTCCCAGCCTGCCTTCTTGCTCTGGAAATaGTCTACAGCAAACACACCACTCCCAAGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: GPCSQPAFLLWK*STANTPLPSLH
Trigger: ATGAAGACTTGGGAGTGGTGTGTTTGCTGTAGACAATTTCCAGAGCAAGAAGGCAGGCTGGGAGCAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CAA 72 bp CCTGATCCATTCATTCAGTTCCCTGAGCACCTACTATaGTGCCAGGTGCTGAGTGAGGCCCCTGCCAGACAA +
Preference number: 6 (lower is better)
Translates to: PDPFIQFPEHLL*CQVLSEAPARQ
Trigger: TTGTCTGGCAGGGGCCTCACTCAGCACCTGGCACAATAGTAGGTGCTCAGGGAACTGAATGAATGGATCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CAA 90 bp GCCTCAGACCCTGATCCATTCATTCAGTTCCCTGAGCACCTACTATaGTGCCAGGTGCTGAGTGAGGCCCCTGCCAGACAAAGACAAGTT +
Preference number: 6 (lower is better)
Translates to: ASDPDPFIQFPEHLL*CQVLSEAPARQRQV
Trigger: AACTTGTCTTTGTCTGGCAGGGGCCTCACTCAGCACCTGGCACAATAGTAGGTGCTCAGGGAACTGAATGAATGGATCAGGGTCTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS GCA 72 bp GGCATTCCAGAAAACCACTCTACCCACTCCAGAGGCTaGACATTCATACACCTGCCCATACCCTCTCCTAGA +
Preference number: 6 (lower is better)
Translates to: GIPENHSTHSRG*TFIHLPIPSPR
Trigger: TCTAGGAGAGGGTATGGGCAGGTGTATGAATGTGCAGCCTCTGGAGTGGGTAGAGTGGTTTTCTGGAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS GCA 72 bp GTGTACAAACTCTTCTGCTTCACGGTGATGCCCTTCTaGTTCAGGGCTTTCTCATTGGCCATCTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: VYKLFCFTVMPF*FRAFSLAICRS
Trigger: GCTCCTGCAGATGGCCAATGAGAAAGCCCTGAAGCAGAAGGGCATCACCGTGAAGCAGAAGAGTTTGTACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000630263.2
CDS CCA 72 bp AGCTTTTATTCCAGAAAGATCTGTGGTGTGGCAGCCTaGAGGGCATGTGCAGAGGCCACAGCCATCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SFYSRKICGVAA*RACAEATAIRN
Trigger: GTTTCTGATGGCTGTGGCCTCTGCACATGCCCTCCAGGCTGCCACACCACAGATCTTTCTGGAATAAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp AGAGGTGAGATCAAGCTTTTATTCCAGAAAGATCTGTaGTGTGGCAGCCTGGAGGGCATGTGCAGAGGCCAC +
Preference number: 6 (lower is better)
Translates to: RGEIKLLFQKDL*CGSLEGMCRGH
Trigger: GTGGCCTCTGCACATGCCCTCCAGGCTGCCACACCACAGATCTTTCTGGAATAAAAGCTTGATCTCACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp CTCCATCCCGATAGTGACAGGGCACCACCAGAGTACTaGGGTGGAGAGGTGAGATCAAGCTTTTATTCCAGA +
Preference number: 6 (lower is better)
Translates to: LHPDSDRAPPEY*GGEVRSSFYSR
Trigger: TCTGGAATAAAAGCTTGATCTCACCTCTCCACCCCAGTACTCTGGTGGTGCCCTGTCACTATCGGGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS TCA 72 bp GTGACAGGGCACCACCAGAGTACTGGGGTGGAGAGGTaGGATCAAGCTTTTATTCCAGAAAGATCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: VTGHHQSTGVER*DQAFIPERSVV
Trigger: CACCACAGATCTTTCTGGAATAAAAGCTTGATCTCACCTCTCCACCCCAGTACTCTGGTGGTGCCCTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566853.1
CDS CCA 72 bp CTCACGCTGACGATCTCCGAGCGGAAGTTCTCTGCATaGACGGCCAAGTGTACAAACTGCCTTTTAGAAAGT +
Preference number: 6 (lower is better)
Translates to: LTLTISERKFSA*TAKCTNCLLES
Trigger: ACTTTCTAAAAGGCAGTTTGTACACTTGGCCGTCCATGCAGAGAACTTCCGCTCGGAGATCGTCAGCGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000562105.2
ENST00000646147.1
CDS CCA 72 bp GTTTGCCTCCAAACTTATTTCTCTCACTCCAGTCTGTaGACAGGTAAGCACCACACACCTGGCCAGGCTGTA +
Preference number: 6 (lower is better)
Translates to: VCLQTYFSHSSL*TGKHHTPGQAV
Trigger: TACAGCCTGGCCAGGTGTGTGGTGCTTACCTGTCCACAGACTGGAGTGAGAGAAATAAGTTTGGAGGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564879.2
CDS CCA 72 bp TTTAGGAGTGGGGAAATGCCATGGAACTGGAGGTGGTaGTTCCACAACATGCTCATTCATGCAACCACCACC +
Preference number: 6 (lower is better)
Translates to: FRSGEMPWNWRW*FHNMLIHATTT
Trigger: GGTGGTGGTTGCATGAATGAGCATGTTGTGGAACCACCACCTCCAGTTCCATGGCATTTCCCCACTCCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636980.1
CDS CCA 72 bp CACAACATGCTCATTCATGCAACCACCACCTCTGTCTaGGGTCGTTCAAATGGTTGGATAGTATGTCAATTT +
Preference number: 6 (lower is better)
Translates to: HNMLIHATTTSV*GRSNGWIVCQF
Trigger: AAATTGACATACTATCCAACCATTTGAACGACCCCAGACAGAGGTGGTGGTTGCATGAATGAGCATGTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636980.1