RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D16 (Homo sapiens)

Ensembl gene IDs: ENSG00000167291

Ensembl transcript IDs: ENST00000310924.7, ENST00000340848.11, ENST00000570373.5, ENST00000571872.1, ENST00000572862.5, ENST00000573782.5, ENST00000574241.6, ENST00000574427.1, ENST00000576768.5

Found 1496 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTaGGGTCCGGGCCAGCCCATGGGGAGCGTGAGGTGCGAGCAGTGC +
Preference number: 1 (lower is better)
Translates to: HGFRGPGWSERCRPH*GPGQPMGSVRCEQC
Trigger: GCACTGCTCGCACCTCACGCTCCCCATGGGCTGGCCCGGACCCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 90 bp GCTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATaGCCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTT +
Preference number: 1 (lower is better)
Translates to: AEPGGKPRPGPGASR*PHAKAACGTGTRWL
Trigger: AAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 90 bp AGAACATGGGAGAAGCCGGGCACACTGGCGTCTGCAGGCTGCCCTTaGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTG +
Preference number: 1 (lower is better)
Translates to: RTWEKPGTLASAGCP*AATGPCLPSTEPAV
Trigger: CACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAGGGCAGCCTGCAGACGCCAGTGTGCCCGGCTTCTCCCATGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp CTAGGCAGGCAGTGCTGGCTCTGCTCTTTCCTGGGGGAAGCCCACTaGTCCTCCTGGGGCCTAGTCCGTGGGACCTGCCCAGCCAGCCTT +
Preference number: 1 (lower is better)
Translates to: LGRQCWLCSFLGEAH*SSWGLVRGTCPASL
Trigger: AAGGCTGGCTGGGCAGGTCCCACGGACTAGGCCCCAGGAGGAGCAGTGGGCTTCCCCCAGGAAAGAGCAGAGCCAGCACTGCCTGCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp AGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTGGGCGTGTaGGAGTGCAGGTGTGCTGACTCCGAACCAAGGGAGAGCTCTCCG +
Preference number: 1 (lower is better)
Translates to: REARPRRRTHSWVGV*ECRCADSEPRESSP
Trigger: CGGAGAGCTCTCCCTTGGTTCGGAGTCAGCACACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCGCCGAGGGCGAGCCTCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp CCCCCAACCCTGGCGGGACCTTCCAGGGCTGGCAAGCATCGAGCCTaGCCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTG +
Preference number: 1 (lower is better)
Translates to: PPTLAGPSRAGKHRA*PRCLLGASTPTSKV
Trigger: CACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCCAGCCCTGGAAGGTCCCGCCAGGGTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp GAAACCTCCCCCTGCCTGGCACTTCGGCTGGTCAGGAACAGTGGCTaGTCATGGAGCTGCCCTCCCACCTTCAGACCCTCCTCCTCCCCC +
Preference number: 1 (lower is better)
Translates to: ETSPCLALRLVRNSG*SWSCPPTFRPSSSP
Trigger: GGGGGAGGAGGAGGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp CATCTCAGAACATGGGAGAAGCCGGGCACACTGGCGTCTGCAGGCTaGCCTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCT +
Preference number: 1 (lower is better)
Translates to: HLRTWEKPGTLASAG*PWAATGPCLPSTEP
Trigger: AGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAGGGCAGCCTGCAGACGCCAGTGTGCCCGGCTTCTCCCATGTTCTGAGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp CCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTaGGCCACCAGGTTCCTCCATCTTCATGTGGCCACCACGGCTGTT +
Preference number: 1 (lower is better)
Translates to: PAQSRCLGGGDIRGP*ATRFLHLHVATTAV
Trigger: AACAGCCGTGGTGGCCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp CAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTCCTGTCTCTaGTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGAGGG +
Preference number: 1 (lower is better)
Translates to: QPSTQWVSEAFLSCL*FPHCLATLSGCPRG
Trigger: CCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp CTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACC +
Preference number: 1 (lower is better)
Translates to: LAVSPSVPLAVPWLA*RRDARDHRAGPGPT
Trigger: GGTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp GAGGCAAAGTGGCCTGCAGGGGCCCCTGCAGAGCATACAGGGAGGTaGTTCCTTCCCTCTGCCCAGCGAGCAAAGGGTGGAGCCTTGGCA +
Preference number: 1 (lower is better)
Translates to: EAKWPAGAPAEHTGR*FLPSAQRAKGGALA
Trigger: TGCCAAGGCTCCACCCTTTGCTCGCTGGGCAGAGGGAAGGAAGCACCTCCCTGTATGCTCTGCAGGGGCCCCTGCAGGCCACTTTGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp GGGTGGAGGTCCTCTCCCTCCTGGACATGGAAACCTCCCCCTGCCTaGCACTTCGGCTGGTCAGGAACAGTGGCTGCTCATGGAGCTGCC +
Preference number: 1 (lower is better)
Translates to: GWRSSPSWTWKPPPA*HFGWSGTVAAHGAA
Trigger: GGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGACCTCCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp AGAGTCACAGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTaGGCGTGTGGGAGTGCAGGTGTGCTGACTCCGAACCAAGGGAGA +
Preference number: 1 (lower is better)
Translates to: RVTERLALGGGHTAG*ACGSAGVLTPNQGR
Trigger: TCTCCCTTGGTTCGGAGTCAGCACACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCGCCGAGGGCGAGCCTCTCTGTGACTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp CAGAAGAGTCACAGAGAGGCTCGCCCTCGGCGGAGGACACACAGCTaGGTGGGCGTGTGGGAGTGCAGGTGTGCTGACTCCGAACCAAGG +
Preference number: 1 (lower is better)
Translates to: QKSHREARPRRRTHS*VGVWECRCADSEPR
Trigger: CCTTGGTTCGGAGTCAGCACACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCGCCGAGGGCGAGCCTCTCTGTGACTCTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp TCTTGGCAGGACAGGTCCAGTTGGTGGCCTGAGGTGGGGTTGTGGTaGGCCTTGTCCCCCTGCAGGGCTGACCCGTGCAGGTGGGATCAT +
Preference number: 1 (lower is better)
Translates to: SWQDRSSWWPEVGLW*ALSPCRADPCRWDH
Trigger: ATGATCCCACCTGCACGGGTCAGCCCTGCAGGGGGACAAGGCCCACCACAACCCCACCTCAGGCCACCAACTGGACCTGTCCTGCCAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp GAGTGCAGGTGTGCTGACTCCGAACCAAGGGAGAGCTCTCCGTCCTaGGCTCGCTGCCCCTCACGATGCACACGGCTGATGGCTGAGGTC +
Preference number: 1 (lower is better)
Translates to: ECRCADSEPRESSPS*ARCPSRCTRLMAEV
Trigger: GACCTCAGCCATCAGCCGTGTGCATCGTGAGGGGCAGCGAGCTCAGGACGGAGAGCTCTCCCTTGGTTCGGAGTCAGCACACCTGCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp CTTCCTGAGGAGCTGCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTaGCATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGT +
Preference number: 1 (lower is better)
Translates to: LPEELPCPVPLPWRR*HQGPLSHQVPPSSC
Trigger: ACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGCAGCTCCTCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp TTCCAGGGCTGGCAAGCATCGAGCCTGACCACGTTGCCTCTTGGGTaGCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCCAGAGGCCC +
Preference number: 1 (lower is better)
Translates to: FQGWQASSLTTLPLG*QHAHIKGVPSSQRP
Trigger: GGGCCTCTGGGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCCAGCCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp CAGAGGGTGGAGGTCCTCTCCCTCCTGGACATGGAAACCTCCCCCTaGCTGGCACTTCGGCTGGTCAGGAACAGTGGCTGCTCATGGAGC +
Preference number: 1 (lower is better)
Translates to: QRVEVLSLLDMETSP*LALRLVRNSGCSWS
Trigger: GCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGACCTCCACCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp CAGAGTCCGCAGCCCGAGGGAGCTTCAAGGCCGAGGGGTAGGACCTaGAGGGCCCACACCACCCTTCTGATGGAGAGCTTTGCACATGCA +
Preference number: 1 (lower is better)
Translates to: QSPQPEGASRPRGRT*RAHTTLLMESFAHA
Trigger: TGCATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGGCCCTGCAGGTCCTACCCCTCGGCCTTGAAGCTCCCTCGGGCTGCGGACTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp TGCCTGGCGACGCTGTCTGGCTGCCCTCGAGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCCAGGGCAGCCAGCAGGAGAGCCCAG +
Preference number: 1 (lower is better)
Translates to: CLATLSGCPRGWSKS*DMLKSSRAASRRAQ
Trigger: CTGGGCTCTCCTGCTGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp AGGCACTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTaGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTC +
Preference number: 1 (lower is better)
Translates to: RHLLSLPPCLWLCHG*PAGGMQETTEQGQV
Trigger: GACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp CATGGAAACCTCCCCCTGCCTGGCACTTCGGCTGGTCAGGAACAGTaGCTGCTCATGGAGCTGCCCTCCCACCTTCAGACCCTCCTCCTC +
Preference number: 1 (lower is better)
Translates to: HGNLPLPGTSAGQEQ*LLMELPSHLQTLLL
Trigger: GAGGAGGAGGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp GGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: GRAAGVVSTKAWKGT*CLSLRAFGCAMAGL
Trigger: CAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp TGTGTCTGCCCCGGGAATCCAAGTAGCCCCAGTGCGCTCCTGCCTTaGTTCCCTAGAGCGAGCCCACGGTACCATAGTCCTCGTGGGATG +
Preference number: 1 (lower is better)
Translates to: CVCPGNPSSPSALLP*FPRASPRYHSPRGM
Trigger: CATCCCACGAGGACTATGGTACCGTGGGCTCGCTCTAGGGAAGCAAGGCAGGAGCGCACTGGGGCTACTTGGATTCCCGGGGCAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp GGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATaGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: GKALAVSPSVPLAVP*LACRRDARDHRAGP
Trigger: TGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCC +
Preference number: 1 (lower is better)
Translates to: AVAKGRAAGVVSTKA*KGTCCLSLRAFGCA
Trigger: GGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GCCCAGCCACGTGACTTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTaGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: AQPRDLLWPRGELQV*CPPRLGKALAVSPS
Trigger: GGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp TCTCCCTCCTGGACATGGAAACCTCCCCCTGCCTGGCACTTCGGCTaGTCAGGAACAGTGGCTGCTCATGGAGCTGCCCTCCCACCTTCA +
Preference number: 1 (lower is better)
Translates to: SPSWTWKPPPAWHFG*SGTVAAHGAALPPS
Trigger: TGAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp GGGACGAAGTGGATCCTGAGGCTCATTCCCTGGGGACTCCAAGAATaGGGCAGGCCCAGCTGCGCAGCCAGTCCTGGCTCCACTGACTTA +
Preference number: 1 (lower is better)
Translates to: GTKWILRLIPWGLQE*GRPSCAASPGSTDL
Trigger: TAAGTCAGTGGAGCCAGGACTGGCTGCGCAGCTGGGCCTGCCCCATTCTTGGAGTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp CGGACAAATTGGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTGGTaGCCTGAGGTGGGGTTGTGGTGGGCCTTGTCCCCCTGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: RTNWKGPSWQDRSSW*PEVGLWWALSPCRA
Trigger: AGCCCTGCAGGGGGACAAGGCCCACCACAACCCCACCTCAGGCCACCAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp TGCCGGACAAATTGGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTaGTGGCCTGAGGTGGGGTTGTGGTGGGCCTTGTCCCCCTGCAGG +
Preference number: 1 (lower is better)
Translates to: CRTNWKGPSWQDRSS*WPEVGLWWALSPCR
Trigger: CCTGCAGGGGGACAAGGCCCACCACAACCCCACCTCAGGCCACCAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp CCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTaGTGCCCTGCCCACCCCCGCCGAGCTTCACACTGGGCTGCTATG +
Preference number: 1 (lower is better)
Translates to: PKGSPHSRASIFILS*CPAHPRRASHWAAM
Trigger: CATAGCAGCCCAGTGTGAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp GAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTaGGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCATCG +
Preference number: 1 (lower is better)
Translates to: ERGSQLLRVNRPFPE*DPASTRQFSHHPPS
Trigger: CGATGGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp CACTGGGACGAAGAGGGGGCACAGATGCAGGTATGCCCAGGTACCTaGGTCCCAGCCAAAGCGGCAAAGCCAGACCTCCCGGGATTCCTT +
Preference number: 1 (lower is better)
Translates to: HWDEEGAQMQVCPGT*VPAKAAKPDLPGFL
Trigger: AAGGAATCCCGGGAGGTCTGGCTTTGCCGCTTTGGCTGGGACTCAGGTACCTGGGCATACCTGCATCTGTGCCCCCTCTTCGTCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp GGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTaGCATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAG +
Preference number: 1 (lower is better)
Translates to: GLERHLLSLPPCLWL*HGWPAGGMQETTEQ
Trigger: CTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp GGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCGTaGCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAG +
Preference number: 1 (lower is better)
Translates to: GVHQGLERHLLSLPP*LWLCHGWPAGGMQE
Trigger: CTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp CTTGTCCTGATGCCCTGCCCACCCCCGCCGAGCTTCACACTGGGCTaGTATGGAAAACTGAAAGGTCAGAGGGTGGAGGTCCTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: LVLMPCPPPPSFTLG*YGKLKGQRVEVLSL
Trigger: GAGGGAGAGGACCTCCACCCTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp GGATCGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTaGATTTTACAGAAGAGTCACAGAGAGGCTCGCCCTCGGCGGAGG +
Preference number: 1 (lower is better)
Translates to: GSQRMGLVAGVGRMG*ILQKSHREARPRRR
Trigger: CCTCCGCCGAGGGCGAGCCTCTCTGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp ACTGTTTGTGTTTCCAGGCACTGGGGTGGGAGCGAGGCTCCCAGTTaGTCAGAGTTAACCGGCCCTTTCCCGAGTGAGACCCCGCGAGCA +
Preference number: 1 (lower is better)
Translates to: TVCVSRHWGGSEAPS*SELTGPFPSETPRA
Trigger: TGCTCGCGGGGTCTCACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCAGTGCCTGGAAACACAAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp TGTCCCGACGACGATAAAGAGCCAGGAGCAGAGAGCCCTGCATCTTaGCTGGGGCCCCTTGTATCTCTGGCTCATGGCCTGTCCTGGGCA +
Preference number: 1 (lower is better)
Translates to: CPDDDKEPGAESPAS*LGPLVSLAHGLSWA
Trigger: TGCCCAGGACAGGCCATGAGCCAGAGATACAAGGGGCCCCAGGCAAGATGCAGGGCTCTCTGCTCCTGGCTCTTTATCGTCGTCGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp GTCTCAAGAGGAAGTGTGTCTGGCTTGCAAAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTG +
Preference number: 1 (lower is better)
Translates to: VSRGSVSGLQRCPWA*TGPRCVLQPSTQWV
Trigger: CACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp TGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATaGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTCGCCCTCGGC +
Preference number: 1 (lower is better)
Translates to: WRDRRGWVSWQEWAE*GAFYRRVTERLALG
Trigger: GCCGAGGGCGAGCCTCTCTGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp CCGCAGGGGTGGGCTGGGGCCCTCCCTCCCTCTGTACTTGATCCATaGCTTGTGAGTTCTGAGTCCTCAGGGCCGAGACTTGAGTCAGAA +
Preference number: 1 (lower is better)
Translates to: PQGWAGALPPSVLDP*LVSSESSGPRLESE
Trigger: TTCTGACTCAAGTCTCGGCCCTGAGGACTCAGAACTCACAAGTCATGGATCAAGTACAGAGGGAGGGAGGGCCCCAGCCCACCCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp CCTGCCCACCCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTaGAAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGGACATGGAAA +
Preference number: 1 (lower is better)
Translates to: PAHPRRASHWAAMEN*KVRGWRSSPSWTWK
Trigger: TTTCCATGTCCAGGAGGGAGAGGACCTCCACCCTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCTCGGCGGGGGTGGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp AACGGCCGTGCAGCCTGGCTTAGAAACAAGGGACGAAGTGGATCCTaGGGCTCATTCCCTGGGGACTCCAAGAATGGGGCAGGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: NGRAAWLRNKGRSGS*GSFPGDSKNGAGPA
Trigger: AGCTGGGCCTGCCCCATTCTTGGAGTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCCCTTGTTTCTAAGCCAGGCTGCACGGCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp GAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTaGGGGAGGGTGATTGAACTGGAGGAGGGGGCTGGCTTGAGACCT +
Preference number: 1 (lower is better)
Translates to: EGMEVATGLDFSGWM*GRVIELEEGAGLRP
Trigger: AGGTCTCAAGCCAGCCCCCTCCTCCAGTTCAATCACCCTCCCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp CTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCACCACGGCTGTTaGAGAGTCCACGGTAAGAGCCAGGACGTGGCTTCCAGGCAGGAT +
Preference number: 1 (lower is better)
Translates to: LSHQVPPSSCGHHGC*RVHGKSQDVASRQD
Trigger: ATCCTGCCTGGAAGCCACGTCCTGGCTCTTACCGTGGACTCTGCAACAGCCGTGGTGGCCACATGAAGATGGAGGAACCTGGTGGCTCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp ACATATGTGTCTGCCCCGGGAATCCAAGTAGCCCCAGTGCGCTCCTaGCTTGCTTCCCTAGAGCGAGCCCACGGTACCATAGTCCTCGTG +
Preference number: 1 (lower is better)
Translates to: TYVSAPGIQVAPVRS*LASLERAHGTIVLV
Trigger: CACGAGGACTATGGTACCGTGGGCTCGCTCTAGGGAAGCAAGGCAGGAGCGCACTGGGGCTACTTGGATTCCCGGGGCAGACACATATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp TGGCACACACCCCAGGAGCCCAAAGATCTGGTTGTTCTCTTGAGATaGAGAGAGGAGGCCCACAGGTGGCGGAGGGGTGAAGGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: WHTPQEPKDLVVLLR*REEAHRWRRGEGGG
Trigger: TCCTCCTCCTTCACCCCTCCGCCACCTGTGGGCCTCCTCTCTGCATCTCAAGAGAACAACCAGATCTTTGGGCTCCTGGGGTGTGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp ACCGTCCATGCCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTaGACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGAC +
Preference number: 1 (lower is better)
Translates to: TVHAVLPFVNADRPP*TSTSSRLSQEGNLD
Trigger: GTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 90 bp TGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATGTTGAAATCCTCCAGGGCAGCCAGC +
Preference number: 1 (lower is better)
Translates to: CFPHCLATLSGCPRG*SKSWDMLKSSRAAS
Trigger: GCTGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp AACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAG +
Preference number: 1 (lower is better)
Translates to: NEVSRGSVSGLQRCP*AWTGPRCVLQPSTQ
Trigger: CTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGAGACCTCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp CACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTTaGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACA +
Preference number: 1 (lower is better)
Translates to: HQGLERHLLSLPPCL*LCHGWPAGGMQETT
Trigger: TGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCCCTTAATGCTGAGCCCAGCCACGTG +
Preference number: 1 (lower is better)
Translates to: ILSLLPPDCAERTIK*QACPPPLNAEPSHV
Trigger: CACGTGGCTGGGCTCAGCATTAAGGGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp GACCTGCAGGGCCCACACCACCCTTCTGATGGAGAGCTTTGCACATaGATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCT +
Preference number: 1 (lower is better)
Translates to: DLQGPHHPSDGELCT*IHTHMPGGIAEDGS
Trigger: AGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGGCCCTGCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp ATGCTGCGTCTGGGCTGTATCCAGGGAACCAGCTGCCGGACAAATTaGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTGGTGGCCTGAG +
Preference number: 1 (lower is better)
Translates to: MLRLGCIQGTSCRTN*KGPSWQDRSSWWPE
Trigger: CTCAGGCCACCAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGATACAGCCCAGACGCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp TTTCCACGAGGTCAGCAGCAGGTGTCTCCTGGTCTGGAGAGGGCATaGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGGA +
Preference number: 1 (lower is better)
Translates to: FPRGQQQVSPGLERA*KWPQVWTSLGGCEG
Trigger: TCCCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCAGACCAGGAGACACCTGCTGCTGACCTCGTGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp AGTCAGAACCTTCTGGAGCAGTACGCATTTCCCCTCTGCACCTGGTaGGGACACCAGGCTCCTCGCTTCCTCCCCAGATCTCTGAGTGCT +
Preference number: 1 (lower is better)
Translates to: SQNLLEQYAFPLCTW*GHQAPRFLPRSLSA
Trigger: AGCACTCAGAGATCTGGGGAGGAAGCGAGGAGCCTGGTGTCCTCACCAGGTGCAGAGGGGAAATGCGTACTGCTCCAGAAGGTTCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp AGGCCAAGGCCAGGTAGGTGGCAGGTGAGACAGGCCCTTCAGACATaGGACCCGAGTGATGTAGATAAGAGGTATGTTCCCCTCCAGCCC +
Preference number: 1 (lower is better)
Translates to: RPRPGRWQVRQALQT*DPSDVDKRYVPLQP
Trigger: GGGCTGGAGGGGAACATACCTCTTATCTACATCACTCGGGTCTCATGTCTGAAGGGCCTGTCTCACCTGCCACCTACCTGGCCTTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp CTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAATCCTGGGACATGTTGAAATCCTCC +
Preference number: 1 (lower is better)
Translates to: LSCLCFPHCLATLSG*PRGWSKSWDMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp GAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTaGCCACCCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTG +
Preference number: 1 (lower is better)
Translates to: ESSFQSQHLHLVLMP*PPPPSFTLGCYGKL
Trigger: CAGTTTTCCATAGCAGCCCAGTGTGAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTGGGCCTGGACAGGACCCCGCTGTGT +
Preference number: 1 (lower is better)
Translates to: VWLTPRERGLKRKCV*LAKMSLGLDRTPLC
Trigger: ACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp ACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGTaGGCAGAATGGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTC +
Preference number: 1 (lower is better)
Translates to: THAWRDRRGWVSWQE*AEWGAFYRRVTERL
Trigger: GAGCCTCTCTGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp AAAAGTGTGGCCCGCCAGGTGGCACCTATGTTCTCTTGCCCGGCGTaGGTGACTACACAGTTGTCATTTACGGGGGAAGTAGGGCACAGC +
Preference number: 1 (lower is better)
Translates to: KSVARQVAPMFSCPA*VTTQLSFTGEVGHS
Trigger: GCTGTGCCCTACTTCCCCCGTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCCACCTGGCGGGCCACACTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp AATTCGGGAGTGGTGGGAATGAAGCCTCTCAGACCGTCCATGCCGTaGTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGT +
Preference number: 1 (lower is better)
Translates to: NSGVVGMKPLRPSMP*FPSLMQIVHPARPR
Trigger: ACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATTCCCACCACTCCCGAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 90 bp CTTCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAGCAAATCCTGGGACATGTTGAAATC +
Preference number: 1 (lower is better)
Translates to: LPLLSLLSSLPGDAV*LPSRVEQILGHVEI
Trigger: GATTTCAACATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp CATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGG +
Preference number: 1 (lower is better)
Translates to: HRHPSCGWGRFGKCV*LTPRERGLKRKCVW
Trigger: CCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GCAGATGCCTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAG +
Preference number: 1 (lower is better)
Translates to: ADAFPSASQLWLGTF*EVCLAHSERTRSQE
Trigger: CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAGGCATCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GGGCTCCAGGACGGTCTCCTCAAAAGGCTCTTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAA +
Preference number: 1 (lower is better)
Translates to: GLQDGLLKRLLGRQT*ELGSTCWTTWVHGE
Trigger: TTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTGAGGAGACCGTCCTGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp ACTGCCTCTCACCCTTCTCCCGACCAACCCCCAAGGGCATGCCTCTaGCTTCATGAACCTTCGGGGGAAATTAGCTTTCTAGTTTGGGGG +
Preference number: 1 (lower is better)
Translates to: TASHPSPDQPPRACL*LHEPSGEISFLVWG
Trigger: CCCCCAAACTAGAAAGCTAATTTCCCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTGGTCGGGAGAAGGGTGAGAGGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 90 bp CCTAGAGCGAGCCCACGGTACCATAGTCCTCGTGGGATGAATGCATaGATGATGTGGAAGGAGCCAGAACAGGGCTGCAGACAGGATGCT +
Preference number: 1 (lower is better)
Translates to: PRASPRYHSPRGMNA*MMWKEPEQGCRQDA
Trigger: AGCATCCTGTCTGCAGCCCTGTTCTGGCTCCTTCCACATCATTCATGCATTCATCCCACGAGGACTATGGTACCGTGGGCTCGCTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp CACAGCACTGCCTCTCACCCTTCTCCCGACCAACCCCCAAGGGCATaGCTCTGGCTTCATGAACCTTCGGGGGAAATTAGCTTTCTAGTT +
Preference number: 1 (lower is better)
Translates to: HSTASHPSPDQPPRA*LWLHEPSGEISFLV
Trigger: AACTAGAAAGCTAATTTCCCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTGGTCGGGAGAAGGGTGAGAGGCAGTGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp AACATGAGGATGATGCTGCGTCTGGGCTGTATCCAGGGAACCAGCTaGCGGACAAATTGGAAGGGACCTTCTTGGCAGGACAGGTCCAGT +
Preference number: 1 (lower is better)
Translates to: NMRMMLRLGCIQGTS*RTNWKGPSWQDRSS
Trigger: ACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGATACAGCCCAGACGCAGCATCATCCTCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp CATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTaGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGAAGAGTCACA +
Preference number: 1 (lower is better)
Translates to: HSHTHAWRDRRGWVS*QEWAEWGAFYRRVT
Trigger: TGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp TTGCACATGCATTCACACACACATGCCTGGCGGGATCGCAGAGGATaGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGA +
Preference number: 1 (lower is better)
Translates to: LHMHSHTHAWRDRRG*VSWQEWAEWGAFYR
Trigger: TCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGCATGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp CTTAGGCTGCACCCCTGCACATATGTGTGTGTGTGTGTGCATGCGTaGGTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: LRLHPCTYVCVCVHA*VCACACVCVCVCVC
Trigger: ACACACACACACACACACACACACACACGCACATGCACACACGCACGCATGCACACACACACACACATATGTGCAGGGGTGCAGCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp TCCACTGACTTAGGCTGCACCCCTGCACATATGTGTGTGTGTGTGTaGATGCGTGCGTGTGTGCATGTGCGTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: STDLGCTPAHMCVCV*MRACVHVRVCVCVC
Trigger: ACACACACACACACACACACGCACATGCACACACGCACGCATGCACACACACACACACATATGTGCAGGGGTGCAGCCTAAGTCAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp TGCATGAATGATGTGGAAGGAGCCAGAACAGGGCTGCAGACAGGATaGTCTCTCATAGAAGGACCCCAGAGAACTTCCCCTCTGGAGCCT +
Preference number: 1 (lower is better)
Translates to: CMNDVEGARTGLQTG*SLIEGPQRTSPLEP
Trigger: AGGCTCCAGAGGGGAAGTTCTCTGGGGTCCTTCTATGAGAGAGCATCCTGTCTGCAGCCCTGTTCTGGCTCCTTCCACATCATTCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 90 bp AGCCAAGGCTCAATAAAATACTGTTTGTGTTTCCAGGCACTGGGGTaGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCC +
Preference number: 1 (lower is better)
Translates to: SQGSIKYCLCFQALG*ERGSQLLRVNRPFP
Trigger: GGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCAGTGCCTGGAAACACAAACAGTATTTTATTGAGCCTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp GGCTCCTTCACTGTGGTCGCTCTCACGTCCGACCACCTGAGAAGCTaGCTTACATATCTGAGTTCACAGGTCCTGAAGGGAAGTGGAAGA +
Preference number: 1 (lower is better)
Translates to: GSFTVVALTSDHLRS*LTYLSSQVLKGSGR
Trigger: TCTTCCACTTCCCTTCAGGACCTGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACCACAGTGAAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp TGCACGCAGGGACACACGCACACATCGACCCATTCAAGCCCCAGCTaGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAA +
Preference number: 1 (lower is better)
Translates to: CTQGHTHTSTHSSPS*LLYLVELTLNNAKE
Trigger: TTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGTGTGCGTGTGTCCCTGCGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTaGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAAATGGCTCGAC +
Preference number: 1 (lower is better)
Translates to: VFLPRRTRWRISGGI*SPRSRSGFLCKWLD
Trigger: GTCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp ATGGTTCTCAGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATaGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGC +
Preference number: 1 (lower is better)
Translates to: MVLSTSRVFLPRRTR*RISGGIWSPRSRSG
Trigger: GCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCTGAGAACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GGACGGTCTCCTCAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTaGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: GRSPQKALRQTDLGT*KYLLDDLGSWRKEK
Trigger: CTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTGAGGAGACCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 90 bp AGCGTGCATCTGTTGTCAGTACAGTTTTATTTGCTGTGGAATCCATaGGAGCCGGAAGCATCGTTGGGGCCGTGGCTAGCAGAGCTCATG +
Preference number: 1 (lower is better)
Translates to: SVHLLSVQFYLLWNP*EPEASLGPWLAELM
Trigger: CATGAGCTCTGCTAGCCACGGCCCCAACGATGCTTCCGGCTCTCATGGATTCCACAGCAAATAAAACTGTACTGACAACAGATGCACGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 90 bp ATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCTAAGCTGGCTGGGAGTTCTCACAGC +
Preference number: 1 (lower is better)
Translates to: ISGGIWSPRSRSGFL*KWLDTSKLAGSSHS
Trigger: GCTGTGAGAACTCCCAGCCAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 90 bp CTCAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGT +
Preference number: 1 (lower is better)
Translates to: LKRLLGRQTWELGST*WTTWVHGEKRSREG
Trigger: ACCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp TTTCTTTTATGGCAGATGCCTTTCCATCGGCATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGA +
Preference number: 1 (lower is better)
Translates to: FLLWQMPFHRHPSCG*GRFGKCVWLTPRER
Trigger: TCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp GGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTGGCTGGGAGTTCTCACAGCATAGAT +
Preference number: 1 (lower is better)
Translates to: GGIWSPRSRSGFLCK*LDTSKLAGSSHSID
Trigger: ATCTATGCTGTGAGAACTCCCAGCCAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp AAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGTGGA +
Preference number: 1 (lower is better)
Translates to: KRLLGRQTWELGSTC*TTWVHGEKRSREGG
Trigger: TCCACCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 90 bp TGCCTCTGGCTTCATGAACCTTCGGGGGAAATTAGCTTTCTAGTTTaGGGGCGGTTCCCTCTGACTGGAGACAGGACAGAATGCTTTCAC +
Preference number: 1 (lower is better)
Translates to: CLWLHEPSGEISFLV*GRFPLTGDRTECFH
Trigger: GTGAAAGCATTCTGTCCTGTCTCCAGTCAGAGGGAACCGCCCCCAAACTAGAAAGCTAATTTCCCCCGAAGGTTCATGAAGCCAGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp CCACTGAGCCCAGTTAGAGCGCTGACCTCCCATCTCAGGACTTCTTaGCCCTTGCCCATTGCCATACTCTACTGTCAGATTTTAAAACTG +
Preference number: 1 (lower is better)
Translates to: PLSPVRALTSHLRTS*PLPIAILYCQILKL
Trigger: CAGTTTTAAAATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATGGGAGGTCAGCGCTCTAACTGGGCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp ACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTaGAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTG +
Preference number: 1 (lower is better)
Translates to: TNFGQTISRLWVWPW*RLPTLVTCMCPSLL
Trigger: CAACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 90 bp AACTGTCCTCCTTACCCCAAAAGTGCTGGAGGAAAGATGGTTGCATaGCTTGACCTCTCTTTGAACTTGAAATGCTACCTTCCTACCCGG +
Preference number: 1 (lower is better)
Translates to: NCPPYPKSAGGKMVA*LDLSLNLKCYLPTR
Trigger: CCGGGTAGGAAGGTAGCATTTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCACTTTTGGGGTAAGGAGGACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp GGGAAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCACGTCCCTGGGACAAAGCAGATCAT +
Preference number: 1 (lower is better)
Translates to: GKWKSLTISRCPCLG*SANTLPRPWDKADH
Trigger: ATGATCTGCTTTGTCCCAGGGACGTGGTAGTGTATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 90 bp TCCTCCTTACCCCAAAAGTGCTGGAGGAAAGATGGTTGCATGACTTaGCCTCTCTTTGAACTTGAAATGCTACCTTCCTACCCGGAAATG +
Preference number: 1 (lower is better)
Translates to: SSLPQKCWRKDGCMT*PLFELEMLPSYPEM
Trigger: CATTTCCGGGTAGGAAGGTAGCATTTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCACTTTTGGGGTAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 90 bp CTTGACCTCTCTTTGAACTTGAAATGCTACCTTCCTACCCGGAAATaGGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTG +
Preference number: 1 (lower is better)
Translates to: LDLSLNLKCYLPTRK*DTLYLKGQMAAGCL
Trigger: CAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTAGGAAGGTAGCATTTCAAGTTCAAAGAGAGGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 90 bp AGGTGTCCTTGTCTTGGTTGGTCAGCTAATACACTACCACGTCCCTaGGACAAAGCAGATCATTGTCAGAGGATCTTGCAAACACAAACA +
Preference number: 1 (lower is better)
Translates to: RCPCLGWSANTLPRP*DKADHCQRILQTQT
Trigger: TGTTTGTGTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGTATTAGCTGACCAACCAAGACAAGGACACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCAGGGCACACTGGCGTCTaGAGGCTGCCCTTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPGHTGV*RLPLGC
Trigger: GCAGCCCAAGGGCAGCCTGCAGACGCCAGTGTGCCC...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCAAGGTGCAGACCTCACTaGGGTCCGGGCCAGCCCATG +
Preference number: 2 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPRCRPH*GPGQPM
Trigger: CATGGGCTGGCCCGGACCCCAGTGAGGTCTGCACCT...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp AATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGACCAGGGGCGAGCCGATaGCCGCATGCAAAGGCGGCG +
Preference number: 2 (lower is better)
Translates to: NADRPPCTSTSSRLSQEGPGASR*PHAKAA
Trigger: CGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGG...TCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACTCTTCCCAGAGGCCCTaGGCAACATCGGGCGACGCT +
Preference number: 2 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDSSQRP*ATSGDA
Trigger: AGCGTCGCCCGATGTTGCTCAGGGCCTCTGGGAAGA...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCAAAGTGGGCGCTTGCTaGGCCCCTGGCCAGCCTCCC +
Preference number: 2 (lower is better)
Translates to: ALSRVRPREHSSILPSPSKVGAC*APGQPP
Trigger: GGGAGGCTGGCCAGGGGCTCAGCAAGCGCCCACTTT...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGGAGAGCCCTGAGTGCTaGCTCCTTCACTGTGGTCGC +
Preference number: 2 (lower is better)
Translates to: LRDNREPGLPEARPLKSVESPEC*LLHCGR
Trigger: GCGACCACAGTGAAGGAGCCAGCACTCAGGGCTCTC...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCGTGCCCAGGGCCTCTaGGGAGGTCCCCTCAACCCC +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALRAQGL*GGPLNP
Trigger: GGGGTTGAGGGGACCTCCTCAGAGGCCCTGGGCACG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGCAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LRDNREPGLPEARPLKSVQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGTGAGGTGCGAGCAGTaGACGGTGGGGGTGGCACTT +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLVRCEQ*TVGVAL
Trigger: AAGTGCCACCCCCACCGTGCACTGCTCGCACCTCAC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACGAGCTGGGCAACCTCTaGCAGCCACTACCCCTTAGC +
Preference number: 2 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDELGNL*QPLPLS
Trigger: GCTAAGGGGTAGTGGCTGGCAGAGGTTGCCCAGCTC...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp CTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGAGCCGATGACCGCATaGAAAGGCGGCGTGTGGTAC +
Preference number: 2 (lower is better)
Translates to: LHVHVQQAEPGGKPRPGPEPMTA*KGGVWY
Trigger: GTACCACACGCCGCCTTTGCATGCGGTCATCGGCTC...TGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLRYPRI*ALMGLQ
Trigger: CTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCATCCTCCATCTTCATGTaGCCACCACGGCTGTTGCAG +
Preference number: 2 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPSSIFM*PPRLLQ
Trigger: CTGCAACAGCCGTGGTGGCCACATGAAGATGGAGGA...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCAAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPNPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTCACGATGCACACGGCTaGTGGCTGAGGTCAGCGGTC +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSHDAHG*WLRSAV
Trigger: GACCGCTGACCTCAGCCATCAGCCGTGTGCATCGTG...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGCGGCCCTTTCCCGAGTaGGACCCCGCGAGCACTCGT +
Preference number: 2 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRRPFPE*DPASTR
Trigger: ACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGCCG...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTCTCAGGTGCGGTGGCTaGGCGTTCCACTGCAGCGTT +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSLRCGG*AFHCSV
Trigger: AACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAG...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: SPSVPLAVPWLACRRDARATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSLCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSDPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGCCAGGTCCGACCTCTaGACCATGAGCATCCCCTGG +
Preference number: 2 (lower is better)
Translates to: SPSVPLAVPWLACRRDARARSDL*TMSIPW
Trigger: CCAGGGGATGCTCATGGTGCAGAGGTCGGACCTGGC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCTGTCTCTCCCTCCGTaGCTTTGGCTGTGCCATGGC +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGLSLPP*LWLCHG
Trigger: GCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAG...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGERTIK*QACPPP
Trigger: GGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTAGAAGCCGGGCACACTaGCGTCTGCAGGCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSRSRAH*RLQAAL
Trigger: AAGGGCAGCCTGCAGACGCCAGTGTGCCCGGCTTCT...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGGCCCACTGCTCCTCCTaGGGCCTAGTCCGTGGGACC +
Preference number: 2 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRAHCSS*GLVRGT
Trigger: GGTCCCACGGACTAGGCCCCAGGAGGAGCAGTGGGC...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp GGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTaGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: GESCRCGVHQGLERH*LSLPPCLWLCHGWP
Trigger: AGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: SPSVPLAVPWLACRRDARDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCATCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 2 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPSRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 2 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSESLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEDPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGGCGTCTCAGGTGCGGTaGCTGCGCGTTCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRASQVR*LRVPLQ
Trigger: CTGCAGTGGAACGCGCAGCCACCGCACCTGAGACGC...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWRCPWA*TGPRCV
Trigger: AACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCT...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGAGAAGCCGAGAAGGTaGAGGAGGCCGGTAAGTGGT +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGEKPRR*RRPVSG
Trigger: ACCACTTACCGGCCTCCTCCACCTTCTCGGCTTCTC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCTTCCGAGGTCCTGGCTaGTCCGAGAGGTGCAGACCT +
Preference number: 2 (lower is better)
Translates to: ALSRVRPREHSSILPSPSFRGPG*SERCRP
Trigger: AGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAA...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGCCTGAGTGGCAGGTGTaGTCCCTGGGACTTCATAAA +
Preference number: 2 (lower is better)
Translates to: LRDNREPGLPEARPLKSVPEWQV*SLGLHK
Trigger: TTTATGAAGTCCCAGGGACCACACCTGCCACTCAGG...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GCCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCTGCAAAGGCGGCGTGTaGTACCGGCACTCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: AVLPFVNADRPPCTSTSSCKGGV*YRHSVA
Trigger: AGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCA...GCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CAA 90 bp CCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGACCAC +
Preference number: 2 (lower is better)
Translates to: PPRLGKALAVSPSVP*AVPWLACRRDARDH
Trigger: GTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCCTCGACGCAGTGGGTaGGTGAGGCCTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALPRRSG*VRPSSP
Trigger: AGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: LRDNREPGLPEARPLKSVELGST*WTTWVH
Trigger: ATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGATTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGC +
Preference number: 2 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGLQRCP*AWTGPR
Trigger: GCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAA...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACCTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGA +
Preference number: 2 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDLGSTC*TTWVHG
Trigger: TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAG...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALRYPRI*ALMGLQ
Trigger: CTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAAAACCTCCCCCTGCCTaGCACTTCGGCTGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGKPPPA*HFGWSG
Trigger: TCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTT...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR TCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDNPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 2 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGSLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGCAGAGAGCCCTGAGTaGTGGCTCCTTCACTGTGGT +
Preference number: 2 (lower is better)
Translates to: LIPEPASSSCPDALPTPAAESPE*WLLHCG
Trigger: ACCACAGTGAAGGAGCCAGCACTCAGGGCTCTCTGC...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTCAACCCCCAAGGGCATaGCTCTGGCTTCATGAACCT +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSQPPRA*LWLHEP
Trigger: AGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTG...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCACCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCCAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGT +
Preference number: 2 (lower is better)
Translates to: SPSVPLAVPWLACRRDARHPSCG*GRFGKC
Trigger: ACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACACTGCTAGACAGCAATaGTCGGTACCCCAGGATCTG +
Preference number: 2 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDTARQQ*SVPQDL
Trigger: CAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGT...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 90 bp GGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCCTGGACAGGACCCCGCTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: GSLRENEVSRGSVSG*QRCPWAWTGPRCVL
Trigger: CAGAACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCCCTCGACGCAGTGGGTaGGTGAGGCCTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPPRRSG*VRPSSP
Trigger: AGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGG...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR TCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACTCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 2 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDSRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCTATCCTGGTCCCCATaGTGGTTCTCAGCACATCAA +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGLSWSP*WFSAHQ
Trigger: TTGATGTGCTGAGAACCATCATGGGGACCAGGATAG...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 2 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRSLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACGTGTGCATGCATaGATGCACGCAGGGACACAC +
Preference number: 2 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKARVHA*MHAGTH
Trigger: GTGTGTCCCTGCGTGCATGCATGCATGCACACGTGC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGCCAGGTCCGACCTCTaGACCATGAGCATCCCCTGG +
Preference number: 2 (lower is better)
Translates to: DLSILFLPPKHSGSKARGARSDL*TMSIPW
Trigger: CCAGGGGATGCTCATGGTGCAGAGGTCGGACCTGGC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCCCAGCCACGTGACTTaGTGTGGCCAAGGGGAGAGC +
Preference number: 2 (lower is better)
Translates to: AELHHASTFKYAHTRTPAPSHVT*CGQGES
Trigger: GCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 2 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGACAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGTCCTCGCTCAAGGAGTaGCTTTCTGTGCAAATGGCT +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGSSLKE*LSVQMA
Trigger: AGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGA...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGTGCTTTGAAGTGGCATaGCCCAGCAGTGCCCACCCT +
Preference number: 2 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKCFEVA*PSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCA...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTTGCTTTGAAGTGGCATaGCCCAGCAGTGCCCACCCT +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALCFEVA*PSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCA...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCGTCCGGGTCAGGTCTTaGGGAGCAGCAGGGGTGAGA +
Preference number: 2 (lower is better)
Translates to: AELHHASTFKYAHTRTPAVRVRS*GAAGVR
Trigger: TCTCACCCCTGCTGCTCCCCAAGACCTGACCCGGAC...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGCGAGCAGTGCACGGTaGGGGTGGCACTTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHASSAR*GWHLVQ
Trigger: CTGCACCAAGTGCCACCCCCACCGTGCACTGCTCGC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACCACACTGGGCTGCTATaGAAAACTGAAAGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDHTGLL*KTERSE
Trigger: CTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTG...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGGCGGTTCCCTCTGACTaGAGACAGGACAGAATGCTT +
Preference number: 2 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWAVPSD*RQDRML
Trigger: AAGCATTCTGTCCTGTCTCCAGTCAGAGGGAACCGC...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp ATTGCATGGCACACACCCCAGGAGCCCAAAGATCTGGTTGTTCTCTaGAGATGCAGAGAGGAGGCCCACAGGTGGCGGAGGGGTGAAGGA +
Preference number: 2 (lower is better)
Translates to: IAWHTPQEPKDLVVL*RCREEAHRWRRGEG
Trigger: TCCTTCACCCCTCCGCCACCTGTGGGCCTCCTCTCTGCATCTCAAGAGAACAACCAGATCTTTGGGCTCCTGGGGTGTGTGCCATGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp TCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGAGGGGGTTTaGAAGCAGCTTCTGCGTCATTGGGAGCTGGCTGCTGCGCCCAGC +
Preference number: 2 (lower is better)
Translates to: SHFGDLHVPLFVEGV*KQLLRHWELAAAPS
Trigger: GCTGGGCGCAGCAGCCAGCTCCCAATGACGCAGAAGCTGCTTCAAAACCCCCTCAACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCGTGCCCAGGGCCTCTaGGGAGGTCCCCTCAACCCC +
Preference number: 2 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHRAQGL*GGPLNP
Trigger: GGGGTTGAGGGGACCTCCTCAGAGGCCCTGGGCACG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCAGAAGCAACATGGATaGGAAGCCCACCCCATTCCC +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALQKQHG*EAHPIP
Trigger: GGGAATGGGGTGGGCTTCTCATCCATGTTGCTTCTG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGGCAAGCATCGAGCCTaGCCACGTTGCCTCTTGGGT +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPGKHRA*PRCLLG
Trigger: ACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCTCAGGTGCGGTGGCTaGGCGTTCCACTGCAGCGTT +
Preference number: 2 (lower is better)
Translates to: VCLAHSERTRSQEEVCLALRCGG*AFHCSV
Trigger: AACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 2 (lower is better)
Translates to: STSRVFLPRRTRWRISGGATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVDPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGGCTGCTCATGGAGCTaGCCTCCCACCTTCAGACCC +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVGCSWS*PPTFRP
Trigger: GGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTATGGAAACCTCCCCCTaGCTGGCACTTCGGCTGGTC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSMETSP*LALRLV
Trigger: GACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCAT...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATGCCTGCAGGGGCCCCTaGAGAGCATACAGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: APPTPTWTKISLNGATSHACRGP*RAYREV
Trigger: CACCTCCCTGTATGCTCTGCAGGGGCCCCTGCAGGC...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: DLSILFLPPKHSGSKARGAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGA +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLFGKCV*LTPRER
Trigger: TCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAA...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTG +
Preference number: 2 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLGFLCK*LDTSKL
Trigger: CAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCGAGAAGCCGAGAAGGTaGAGGAGGCCGGTAAGTGGT +
Preference number: 2 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAEKPRR*RRPVSG
Trigger: ACCACTTACCGGCCTCCTCCACCTTCTCGGCTTCTC...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCACAGACCTGGGAACTTaGAAGTACCTGCTGGACGAC +
Preference number: 2 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSTDLGT*KYLLDD
Trigger: GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGT...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSVSTKA*KGTCCL
Trigger: GAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACAC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTCGCGGGGTTTTTGGCTaGTTTCCTCTAATTGCATCC +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSRGVFG*FPLIAS
Trigger: GGATGCAATTAGAGGAAACCAGCCAAAAACCCCGCG...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTCCTCTGAGGCAAAGTaGCCTGCAGGGGCCCCTGCA +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVSSEAK*PAGAPA
Trigger: TGCAGGGGCCCCTGCAGGCCACTTTGCCTCAGAGGA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGGACACACAGCTGGGTaGGCGTGTGGGAGTGCAGGT +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVGHTAG*ACGSAG
Trigger: ACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp CCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: PSASQLWLGTFWEVC*AHSERTRSQEEVCL
Trigger: CAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 90 bp GGCAGATGCCTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTaGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: GRCLSIGIPAVAGDV*GSVFGSLRENEVSR
Trigger: TCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAGGCATCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 2 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 2 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACT +
Preference number: 2 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRQTADS*PRSVLT
Trigger: AGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTG...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACT +
Preference number: 2 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKQTADS*PRSVLT
Trigger: AGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 2 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFRCPWA*TGPRCV
Trigger: AACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCT...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: STSRVFLPRRTRWRISGGRCPWA*TGPRCV
Trigger: AACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCT...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGC +
Preference number: 2 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRLQRCP*AWTGPR
Trigger: GCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAA...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGGTCCTGAAGGGAAGTaGAAGAGTCTAACTATTTCC +
Preference number: 2 (lower is better)
Translates to: QLMASEVLAGPRGADLTGGPEGK*KSLTIS
Trigger: GGAAATAGTTAGACTCTTCCACTTCCCTTCAGGACC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGC +
Preference number: 2 (lower is better)
Translates to: LIPEPASSSCPDALPTPALGRQT*ELGSTC
Trigger: GCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGGCCTCCAAAAGAGCTaGGCAACCTCTGCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHGLQKS*ATSASH
Trigger: GTGGCTGGCAGAGGTTGCCCAGCTCTTTTGGAGGCC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTCCAAGGCCAGGTAGGTaGCAGGTGAGACAGGCCCTT +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVPRPGR*QVRQAL
Trigger: AAGGGCCTGTCTCACCTGCCACCTACCTGGCCTTGG...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp CAGGTGGCACCTATGTTCTCTTGCCCGGCGTGGGTGACTACACAGTaGTCATTTACGGGGGAAGTAGGGCACAGCAGAGGTGAACATGAG +
Preference number: 2 (lower is better)
Translates to: QVAPMFSCPAWVTTQ*SFTGEVGHSRGEHE
Trigger: CTCATGTTCACCTCTGCTGTGCCCTACTTCCCCCGTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTATGGCCGTGCAGGGCTaGTTATCCCCTATTTGCACG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPMAVQG*LSPICT
Trigger: CGTGCAAATAGGGGATAATCAGCCCTGCACGGCCAT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGCTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: GTFWEVCLAHSERTRSQELCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGAAAAAGGCATCAGATaGTTCTCCAACAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGEKGIR*FSNSLR
Trigger: CCTCAGGCTGTTGGAGAAGCATCTGATGCCTTTTTC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGCACGCACGTGTGCATaGATGCATGCACGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTARTCA*MHARRD
Trigger: GTCCCTGCGTGCATGCATGCATGCACACGTGCGTGC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGCACGCACGTGTGCATaGATGCATGCACGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMARTCA*MHARRD
Trigger: GTCCCTGCGTGCATGCATGCATGCACACGTGCGTGC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTATTGTCAGAGGATCTTaGAAACACAAACACGCACGC +
Preference number: 2 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSIVRGS*KHKHAR
Trigger: GCGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAAT...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAGCGTCTCAGGTGCGGTaGCTGCGCGTTCCACTGCAG +
Preference number: 2 (lower is better)
Translates to: YPLFARSGGGKARSLMTEASQVR*LRVPLQ
Trigger: CTGCAGTGGAACGCGCAGCCACCGCACCTGAGACGC...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 2 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGTCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRSASQL*LGTFWE
Trigger: TTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGA...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTCTGGCTCCTTCACTGTaGTCGCTCTCACGTCCGACC +
Preference number: 2 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSLAPSL*SLSRPT
Trigger: GGTCGGACGTGAGAGCGACCACAGTGAAGGAGCCAG...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCGGAGAGCTGCAGGTGTaGTGTCCACCAAGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCGELQV*CPPRLG
Trigger: TCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCC...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCAACAGTGGCTGCTCATaGAGCTGCCCTCCCACCTTC +
Preference number: 2 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCNSGCS*SCPPTF
Trigger: GAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTT...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGCCTGGCACTTCGGCTaGTCAGGAACAGTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMAWHFG*SGTVAA
Trigger: AGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR TCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGTGCAGAGATGCAGCTaGTTGGTCCGGGTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMVQRCS*LVRVRS
Trigger: AGACCTGACCCGGACCAATCAGCTGCATCTCTGCAC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR TCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGCAGTCCTGGCTCCACTaGCTTAGGCTGCACCCCTGC +
Preference number: 2 (lower is better)
Translates to: QESTNFGQTISRLWVWPWQSWLH*LRLHPC
Trigger: GCAGGGGTGCAGCCTAAGTCAGTGGAGCCAGGACTG...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 2 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTLCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCTTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 2 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTCCTCAAGCCTGACTaGTCTTCCGCCTCTCTATCC +
Preference number: 2 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDLLKPD*SSASLS
Trigger: GGATAGAGAGGCGGAAGAGCAGTCAGGCTTGAGGAG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCT +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALRSGFL*KWLDTS
Trigger: AGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCT...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCC +
Preference number: 2 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMAWKGT*CLSLRA
Trigger: GGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGACACTACCACGTCCCTaGGACAAAGCAGATCATTGT +
Preference number: 2 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKTLPRP*DKADHC
Trigger: ACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGT...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGGTCCTGAAGGGAAGTaGAAGAGTCTAACTATTTCC +
Preference number: 2 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSGPEGK*KSLTIS
Trigger: GGAAATAGTTAGACTCTTCCACTTCCCTTCAGGACC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTACTGCTAGACAGCAATaGTCGGTACCCCAGGATCTG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSTARQQ*SVPQDL
Trigger: CAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGT...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTACCATGAGCATCCCCTaGGACTTAACAACCCACTGG +
Preference number: 2 (lower is better)
Translates to: DLSILFLPPKHSGSKARGTMSIP*DLTTHW
Trigger: CCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPVSTKA*KGTCCL
Trigger: GAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACAC...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGAGAGGGCATGGAAGTaGCCACAGGTCTGGACTTCT +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVERAWK*PQVWTS
Trigger: AGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 90 bp ACGCAGGGACACACGCACACATCGACCCATTCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCT +
Preference number: 2 (lower is better)
Translates to: TQGHTHTSTHSSPSW*LYLVELTLNNAKEP
Trigger: AGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGTGTGCGTGTGTCCCTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 90 bp GGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAAATGGCTCGA +
Preference number: 2 (lower is better)
Translates to: GFSPQKDAMEDFRRD*VSSLKEWLSVQMAR
Trigger: TCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCCCAGAAGGAGCAACTaGTACACAATCTTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: WPRGELQVWCPPRLGKALPRRSN*YTIFWK
Trigger: CTTCCAAAAGATTGTGTATCAGTTGCTCCTTCTGGG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGATTGTCAGAGGATCTTaGAAACACAAACACGCACGC +
Preference number: 2 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKIVRGS*KHKHAR
Trigger: GCGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAAT...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 2 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR GCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGGGCCTGCAGGAGGGATaGAAGAGACCACAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: QESTNFGQTISRLWVWPWGLQEG*KRPQSR
Trigger: CCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCC...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGAC +
Preference number: 2 (lower is better)
Translates to: YPLFARSGGGKARSLMTEVPWLA*RRDARD
Trigger: GTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCAC...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGGCACAGAGCCTGCCGTaGTTTGACCCAGCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: QESTNFGQTISRLWVWPWAQSLP*FDPASP
Trigger: GGGACTTGCTGGGTCAAAGCACGGCAGGCTCTGTGC...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 2 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTG +
Preference number: 2 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGGFLCK*LDTSKL
Trigger: CAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCC...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCGACGACCTGGGTTCATaGAGAAAAGAGAAGCCGAGA +
Preference number: 2 (lower is better)
Translates to: AELHHASTFKYAHTRTPADDLGS*RKEKPR
Trigger: TCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTC...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCACAGACCTGGGAACTTaGAAGTACCTGCTGGACGAC +
Preference number: 2 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCTDLGT*KYLLDD
Trigger: GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGT...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CAA 90 bp ACATCGACCCATTCAAGCCCCAGCTGGTTGCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCCAG +
Preference number: 2 (lower is better)
Translates to: TSTHSSPSWLLYLVE*TLNNAKEPHVEDPQ
Trigger: CTGGGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAACCTCGACGCAGTGGGTaGGTGAGGCCTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEPRRSG*VRPSSP
Trigger: AGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGG...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGATTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 2 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGAAAAAGGCATCAGATaGTTCTCCAACAGCCTGAGG +
Preference number: 2 (lower is better)
Translates to: DLSILFLPPKHSGSKARGEKGIR*FSNSLR
Trigger: CCTCAGGCTGTTGGAGAAGCATCTGATGCCTTTTTC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 2 (lower is better)
Translates to: STSRVFLPRRTRWRISGGGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTG +
Preference number: 2 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGKRKCV*LAKMSL
Trigger: CAGGGACATCTTTGCAAGCCAGACACACTTCCTCTT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATTCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNSASQL*LGTFWE
Trigger: TTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGA...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAA +
Preference number: 2 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPSASQL*LGTFWE
Trigger: TTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACAGAGGGAGAGTCTGTTaGGAAGACCTCATTCCCACA +
Preference number: 2 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDRGRVC*EDLIPT
Trigger: TGTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAGAGGGAGAGTCTGTTaGGAAGACCTCATTCCCACA +
Preference number: 2 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRRGRVC*EDLIPT
Trigger: TGTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCACACTGGGCTGCTATaGAAAACTGAAAGGTCAGAG +
Preference number: 2 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSHTGLL*KTERSE
Trigger: CTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CAA 90 bp CACACGCACACATCGACCCATTCAAGCCCCAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAA +
Preference number: 2 (lower is better)
Translates to: HTHTSTHSSPSWLLY*VELTLNNAKEPHVE
Trigger: TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGTGTGCGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGACTATCCTGGTCCCCATaGTGGTTCTCAGCACATCAA +
Preference number: 2 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRLSWSP*WFSAHQ
Trigger: TTGATGTGCTGAGAACCATCATGGGGACCAGGATAG...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCCCCACATCTATTTCTaGCAAACAAGAAGCAGACGA +
Preference number: 2 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSPHIYF*QTRSRR
Trigger: TCGTCTGCTTCTTGTTTGGCAGAAATAGATGTGGGG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 2 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACATTTCAGGAGGGATTTaGTCTCCTCGCTCAAGGAGT +
Preference number: 2 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDISGGI*SPRSRS
Trigger: ACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAAT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAAGAGATGCAGCTGATTaGTCCGGGTCAGGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: YPLFARSGGGKARSLMTERDAAD*SGSGLG
Trigger: CCCAAGACCTGACCCGGACCAATCAGCTGCATCTCT...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 90 bp AGCCCAGTTAGAGCGCTGACCTCCCATCTCAGGACTTCTTGGCCCTaGCCCATTGCCATACTCTACTGTCAGATTTTAAAACTGCTAGAC +
Preference number: 2 (lower is better)
Translates to: SPVRALTSHLRTSWP*PIAILYCQILKLLD
Trigger: GTCTAGCAGTTTTAAAATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATGGGAGGTCAGCGCTCTAACTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 2 (lower is better)
Translates to: TSRVFLPRRTRWRISGGISRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGGAAAGATGGTTGCATaGCTTGACCTCTCTTTGAAC +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVGKMVA*LDLSLN
Trigger: GTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTCTGATGGAGAGCTTTaGACATGCATTCACACACAC +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVSDGEL*TCIHTH
Trigger: GTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTCCTCGTGGGATGAATaGATGAATGATGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: VALVKASHFGDLHVPLFVSSWDE*MNDVEG
Trigger: TCCTTCCACATCATTCATGCATTCATCCCACGAGGA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 2 (lower is better)
Translates to: KWKSLTISRCPCLGWSANGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVERTIK*QACPPP
Trigger: GGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGCCAGAGGGCACAGCTTaGGCAGATTCCCATCATCTA +
Preference number: 2 (lower is better)
Translates to: QESTNFGQTISRLWVWPWPEGTA*ADSHHL
Trigger: TAGATGATGGGAATCTGCCCAAGCTGTGCCCTCTGG...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATTCTGTACTTGATCCATaGCTTGTGAGTTCTGAGTCC +
Preference number: 2 (lower is better)
Translates to: APPTPTWTKISLNGATSHSVLDP*LVSSES
Trigger: GGACTCAGAACTCACAAGTCATGGATCAAGTACAGA...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR TCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGCCCTCCCTCTGTACTTaGTCCATGACTTGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: QESTNFGQTISRLWVWPWPSLCT*SMTCEF
Trigger: GAACTCACAAGTCATGGATCAAGTACAGAGGGAGGG...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCTGGTTTCCTCTAATTaGATCCAGATTAAGGGAGTT +
Preference number: 2 (lower is better)
Translates to: AELHHASTFKYAHTRTPALVSSN*IQIKGV
Trigger: AACTCCCTTAATCTGGATGCAATTAGAGGAAACCAG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTG +
Preference number: 2 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIKRKCV*LAKMSL
Trigger: CAGGGACATCTTTGCAAGCCAGACACACTTCCTCTT...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATCCTCGCTCAAGGAGTaGCTTTCTGTGCAAATGGCT +
Preference number: 2 (lower is better)
Translates to: YPLFARSGGGKARSLMTESSLKE*LSVQMA
Trigger: AGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCT +
Preference number: 2 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDEKSFE*EEAFYP
Trigger: AGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCAATAAGCAGCATTGCTaGGGATGGCCGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVNKQHC*GWPCRA
Trigger: AGCCCTGCACGGCCATCCTCAGCAATGCTGCTTATT...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCT +
Preference number: 2 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSREKSFE*EEAFYP
Trigger: AGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 2 (lower is better)
Translates to: VPFVYQEDEMFKRINITSNPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCCCCACATCTATTTCTaGCAAACAAGAAGCAGACGA +
Preference number: 2 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFPHIYF*QTRSRR
Trigger: TCGTCTGCTTCTTGTTTGGCAGAAATAGATGTGGGG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAATTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 2 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGAGAGCCCTGAGTGCTaGCTCCTTCACTGTGGTCGC +
Preference number: 2 (lower is better)
Translates to: LSMRTHVRQPITLSVILKESPEC*LLHCGR
Trigger: GCGACCACAGTGAAGGAGCCAGCACTCAGGGCTCTC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 90 bp TGTCTTTTTCTATTGTGCTTGTTCATGGCCAGGAATCAACGAACTTaGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTGAAGGC +
Preference number: 2 (lower is better)
Translates to: CLFLLCLFMARNQRT*DRQSVDFGCGLGEG
Trigger: GCCTTCACCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTGGCCATGAACAAGCACAATAGAAAAAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCAT +
Preference number: 2 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVELGST*WTTWVH
Trigger: ATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCA +
Preference number: 2 (lower is better)
Translates to: YPLFARSGGGKARSLMTECPCLG*SANTLP
Trigger: TGGTAGTGTATTAGCTGACCAACCAAGACAAGGACA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATTGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCA +
Preference number: 2 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNCPCLG*SANTLP
Trigger: TGGTAGTGTATTAGCTGACCAACCAAGACAAGGACA...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGGTGGGGGTGGCACTTaGTGCAGAGATGCAGCTGAT +
Preference number: 2 (lower is better)
Translates to: LSMRTHVRQPITLSVILKGGGGT*CRDAAD
Trigger: ATCAGCTGCATCTCTGCACCAAGTGCCACCCCCACC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCAGGGAGAAAAGCTTTaGGTGGGAAGAAGCCTTCTA +
Preference number: 2 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVQGEKL*VGRSLL
Trigger: TAGAAGGCTTCTTCCCACTCAAAGCTTTTCTCCCTG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGA +
Preference number: 2 (lower is better)
Translates to: KWKSLTISRCPCLGWSANFGKCV*LTPRER
Trigger: TCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAA...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGT +
Preference number: 2 (lower is better)
Translates to: LSMRTHVRQPITLSVILKHPSCG*GRFGKC
Trigger: ACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR TCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCCCAGAAGGAGCAACTaGTACACAATCTTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVPRRSN*YTIFWK
Trigger: CTTCCAAAAGATTGTGTATCAGTTGCTCCTTCTGGG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATTTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 2 (lower is better)
Translates to: KWKSLTISRCPCLGWSANFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAATTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 2 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAATTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGC +
Preference number: 2 (lower is better)
Translates to: LSMRTHVRQPITLSVILKLGRQT*ELGSTC
Trigger: GCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATTTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 2 (lower is better)
Translates to: KWKSLTISRCPCLGWSANFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGGCAATGGATATAACTaGTTTCTAGCGGAGGGTCAG +
Preference number: 2 (lower is better)
Translates to: LSMRTHVRQPITLSVILKGNGYN*FLAEGQ
Trigger: CTGACCCTCCGCTAGAAACCAGTTATATCCATTGCC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTaGGGTCCGGGCCAGCCCATGGGGAGCGTGAGGTGC +
Preference number: 3 (lower is better)
Translates to: RGPGWSERCRPH*GPGQPMGSVRC
Trigger: GCACCTCACGCTCCCCATGGGCTGGCCCGGACCCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCATCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPSPSVP*AVPWLA
Trigger: GGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp CTGCCCAGCTGTGTGGCAAGGGCACTCCCTAGGCACTaGGCAGCCACCGCCAGCCCTGAGGGCTGCGGGACA +
Preference number: 3 (lower is better)
Translates to: LPSCVARALPRH*AATASPEGCGT
Trigger: TGTCCCGCAGCCCTCAGGGCTGGCGGTGGCTGCTCAGTGCCTAGGGAGTGCCCTTGCCACACAGCTGGGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp GGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATaGCCGCATGCAAAGGCGGCGTGTGGTACCGGCACT +
Preference number: 3 (lower is better)
Translates to: GGKPRPGPGASR*PHAKAACGTGT
Trigger: AGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 72 bp GAGAGGCTCGCCCTCGGCGGAGGACACACAGCTGGGTaGGCGTGTGGGAGTGCAGGTGTGCTGACTCCGAAC +
Preference number: 3 (lower is better)
Translates to: ERLALGGGHTAG*ACGSAGVLTPN
Trigger: GTTCGGAGTCAGCACACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCGCCGAGGGCGAGCCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 72 bp CTGGCGGGACCTTCCAGGGCTGGCAAGCATCGAGCCTaGCCACGTTGCCTCTTGGGTGCCAGCACGCCCACA +
Preference number: 3 (lower is better)
Translates to: LAGPSRAGKHRA*PRCLLGASTPT
Trigger: TGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCCAGCCCTGGAAGGTCCCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp CAGTGCTGGCTCTGCTCTTTCCTGGGGGAAGCCCACTaGTCCTCCTGGGGCCTAGTCCGTGGGACCTGCCCA +
Preference number: 3 (lower is better)
Translates to: QCWLCSFLGEAH*SSWGLVRGTCP
Trigger: TGGGCAGGTCCCACGGACTAGGCCCCAGGAGGAGCAGTGGGCTTCCCCCAGGAAAGAGCAGAGCCAGCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp TGGCCTGAGGTGGGGTTGTGGTGGGCCTTGTCCCCCTaGAGGGCTGACCCGTGCAGGTGGGATCATCCTTCC +
Preference number: 3 (lower is better)
Translates to: WPEVGLWWALSP*RADPCRWDHPS
Trigger: GGAAGGATGATCCCACCTGCACGGGTCAGCCCTGCAGGGGGACAAGGCCCACCACAACCCCACCTCAGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp CTCTGCTCTTTCCTGGGGGAAGCCCACTGCTCCTCCTaGGGCCTAGTCCGTGGGACCTGCCCAGCCAGCCTT +
Preference number: 3 (lower is better)
Translates to: LCSFLGEAHCSS*GLVRGTCPASL
Trigger: AAGGCTGGCTGGGCAGGTCCCACGGACTAGGCCCCAGGAGGAGCAGTGGGCTTCCCCCAGGAAAGAGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp GCACGGTGGGGGTGGCACTTGGTGCAGAGATGCAGCTaGTTGGTCCGGGTCAGGTCTTGGGGAGCAGCAGGG +
Preference number: 3 (lower is better)
Translates to: ARWGWHLVQRCS*LVRVRSWGAAG
Trigger: CCCTGCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGCCACCCCCACCGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp CGTCCTGAGCTCGCTGCCCCTCACGATGCACACGGCTaGTGGCTGAGGTCAGCGGTCTCTTCCCTGAGTGGC +
Preference number: 3 (lower is better)
Translates to: RPELAAPHDAHG*WLRSAVSSLSG
Trigger: GCCACTCAGGGAAGAGACCGCTGACCTCAGCCATCAGCCGTGTGCATCGTGAGGGGCAGCGAGCTCAGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 72 bp GGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTaGCCCAGCAAGTCCCACCGCACCTTCCAGAGGCAC +
Preference number: 3 (lower is better)
Translates to: GPCLPSTEPAVL*PSKSHRTFQRH
Trigger: GTGCCTCTGGAAGGTGCGGTGGGACTTGCTGGGTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp CCCTGCCTGGCACTTCGGCTGGTCAGGAACAGTGGCTaGTCATGGAGCTGCCCTCCCACCTTCAGACCCTCC +
Preference number: 3 (lower is better)
Translates to: PCLALRLVRNSG*SWSCPPTFRPS
Trigger: GGAGGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp CCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTaGTTTGACCCAGCAAGTCCCACCGCACCTTCCAGA +
Preference number: 3 (lower is better)
Translates to: PRGPVCPAQSLP*FDPASPTAPSR
Trigger: TCTGGAAGGTGCGGTGGGACTTGCTGGGTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp CTCCCCCTGCCTGGCACTTCGGCTGGTCAGGAACAGTaGCTGCTCATGGAGCTGCCCTCCCACCTTCAGACC +
Preference number: 3 (lower is better)
Translates to: LPLPGTSAGQEQ*LLMELPSHLQT
Trigger: GGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGGTCCGGGTCAGGTCTaGGGGAGCAGCAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSGPGQV*GSSRGE
Trigger: CTCACCCCTGCTGCTCCCCAAGACCTGACCCGGACC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGTGGGCCAAACCGCCTTaGCCCATCCCTCCCCTGACC +
Preference number: 3 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWWAKPP*PIPPLT
Trigger: GGTCAGGGGAGGGATGGGCAAAGGCGGTTTGGCCCA...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp GGGCAGGCCCAGCTGCGCAGCCAGTCCTGGCTCCACTaGCTTAGGCTGCACCCCTGCACATATGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GQAQLRSQSWLH*LRLHPCTYVCV
Trigger: CACACACACATATGTGCAGGGGTGCAGCCTAAGTCAGTGGAGCCAGGACTGGCTGCGCAGCTGGGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 72 bp TCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTaGGCCACCAGGTTCCTCCATCTTCATGTGGCCACC +
Preference number: 3 (lower is better)
Translates to: SRCLGGGDIRGP*ATRFLHLHVAT
Trigger: GGTGGCCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp AGCCTGCGTCTCAGGTGCGGTGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGACTTTCCTCTGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SLRLRCGGCAFH*SVSGADFPLGG
Trigger: GCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGACCACAGAGCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: SPSVPLAVPWLA*RRDARDHRAGP
Trigger: TGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GAGGTCCTCTCCCTCCTGGACATGGAAACCTCCCCCTaGCTGGCACTTCGGCTGGTCAGGAACAGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: EVLSLLDMETSP*LALRLVRNSGC
Trigger: GCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGACCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp GGGCTGGCAAGCATCGAGCCTGACCACGTTGCCTCTTaGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: GLASIEPDHVAS*VPARPHQRCPL
Trigger: GAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp AGGGGCGAGCCGATGACCGCATGCAAAGGCGGCGTGTaGTACCGGCACTCGGTGGCTTCAGACTCGCTTTCA +
Preference number: 3 (lower is better)
Translates to: RGEPMTACKGGV*YRHSVASDSLS
Trigger: TGAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR-3UTR CAA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACTCTCTGCTTTCCTCATaGCCTGGCGACGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDSLLSS*PGDAVW
Trigger: CCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGA...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp TGTGCTGACTCCGAACCAAGGGAGAGCTCTCCGTCCTaGGCTCGCTGCCCCTCACGATGCACACGGCTGATG +
Preference number: 3 (lower is better)
Translates to: CADSEPRESSPS*ARCPSRCTRLM
Trigger: CATCAGCCGTGTGCATCGTGAGGGGCAGCGAGCTCAGGACGGAGAGCTCTCCCTTGGTTCGGAGTCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 72 bp GAAGAGGGGGCACAGATGCAGGTATGCCCAGGTACCTaGGTCCCAGCCAAAGCGGCAAAGCCAGACCTCCCG +
Preference number: 3 (lower is better)
Translates to: EEGAQMQVCPGT*VPAKAAKPDLP
Trigger: CGGGAGGTCTGGCTTTGCCGCTTTGGCTGGGACTCAGGTACCTGGGCATACCTGCATCTGTGCCCCCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp AGGCACTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTaGCATGGCTGGCCTGCAGGAGGGATGCAAGAGACC +
Preference number: 3 (lower is better)
Translates to: RHLLSLPPCLWL*HGWPAGGMQET
Trigger: GGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CCCAGCCACGTGACTTGCTGTGGCCAAGGGGAGAGCTaGAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: PSHVTCCGQGES*RCGVHQGLERH
Trigger: GTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CCCGGGAATCCAAGTAGCCCCAGTGCGCTCCTGCCTTaGTTCCCTAGAGCGAGCCCACGGTACCATAGTCCT +
Preference number: 3 (lower is better)
Translates to: PGNPSSPSALLP*FPRASPRYHSP
Trigger: AGGACTATGGTACCGTGGGCTCGCTCTAGGGAAGCAAGGCAGGAGCGCACTGGGGCTACTTGGATTCCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp TCTGCCCCGGGAATCCAAGTAGCCCCAGTGCGCTCCTaGCTTGCTTCCCTAGAGCGAGCCCACGGTACCATA +
Preference number: 3 (lower is better)
Translates to: SAPGIQVAPVRS*LASLERAHGTI
Trigger: TATGGTACCGTGGGCTCGCTCTAGGGAAGCAAGGCAGGAGCGCACTGGGGCTACTTGGATTCCCGGGGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp GCCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTaGACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: AVLPFVNADRPP*TSTSSRLSQEG
Trigger: TCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 72 bp GGAAGTGTGTCTGGCTTGCAAAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACG +
Preference number: 3 (lower is better)
Translates to: GSVSGLQRCPWA*TGPRCVLQPST
Trigger: CGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTaGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: LSLPPCLWLCHG*PAGGMQETTEQ
Trigger: CTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TGGACATGGAAACCTCCCCCTGCCTGGCACTTCGGCTaGTCAGGAACAGTGGCTGCTCATGGAGCTGCCCTC +
Preference number: 3 (lower is better)
Translates to: WTWKPPPAWHFG*SGTVAAHGAAL
Trigger: GAGGGCAGCTCCATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp AAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGGACATaGAAACCTCCCCCTGCCTGGCACTTCGGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: KVRGWRSSPSWT*KPPPAWHFGWS
Trigger: TGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGACCTCCACCCTCTGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVSPSVP*AVPWLA
Trigger: GGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCCCTCAGGGCCGAGACTaGAGTCAGAACCTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: ALSRVRPREHSSILPSPSPQGRD*SQNLLE
Trigger: CTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGG...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp CCCCGCCGAGCTTCACACTGGGCTGCTATGGAAAACTaGAAGGTCAGAGGGTGGAGGTCCTCTCCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: PRRASHWAAMEN*KVRGWRSSPSW
Trigger: CCAGGAGGGAGAGGACCTCCACCCTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCTCGGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp ACGCAGTGGGTGAGTGAGGCCTTCCTCTCCTGTCTCTaGTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGC +
Preference number: 3 (lower is better)
Translates to: TQWVSEAFLSCL*FPHCLATLSGC
Trigger: GCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGAAGGCCTCACTCACCCACTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp TGGCAAGCATCGAGCCTGACCACGTTGCCTCTTGGGTaGCAGCACGCCCACATCAAAGGTGTCCCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: WQASSLTTLPLG*QHAHIKGVPSS
Trigger: GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp CTTGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATaGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGA +
Preference number: 3 (lower is better)
Translates to: LAVSPSVPLAVP*LACRRDARDHR
Trigger: TCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCCCTTAATGCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: LLPPDCAERTIK*QACPPPLNAEP
Trigger: GGGCTCAGCATTAAGGGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TCCTCTCCCTCCTGGACATGGAAACCTCCCCCTGCCTaGCACTTCGGCTGGTCAGGAACAGTGGCTGCTCAT +
Preference number: 3 (lower is better)
Translates to: SSPSWTWKPPPA*HFGWSGTVAAH
Trigger: ATGAGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp CATTCACACACACATGCCTGGCGGGATCGCAGAGGATaGGTCTCGTGGCAGGAGTGGGCAGAATGGGGTGCA +
Preference number: 3 (lower is better)
Translates to: HSHTHAWRDRRG*VSWQEWAEWGA
Trigger: TGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp GACCCCAGAGAACTTCCCCTCTGGAGCCTGTGCGGCTaGTTGAGTGTAAACGCTGAGTCATGCTCGCTGCCC +
Preference number: 3 (lower is better)
Translates to: DPRELPLWSLCG*LSVNAESCSLP
Trigger: GGGCAGCGAGCATGACTCAGCGTTTACACTCAACCAGCCGCACAGGCTCCAGAGGGGAAGTTCTCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp GGTCAGCAGCAGGTGTCTCCTGGTCTGGAGAGGGCATaGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: GQQQVSPGLERA*KWPQVWTSLGG
Trigger: TCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCAGACCAGGAGACACCTGCTGCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp TTTGTTGAGGGGGTTTTGAAGCAGCTTCTGCGTCATTaGGAGCTGGCTGCTGCGCCCAGCCTGAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: FVEGVLKQLLRH*ELAAAPSLRPW
Trigger: CCAGGGCCTCAGGCTGGGCGCAGCAGCCAGCTCCCAATGACGCAGAAGCTGCTTCAAAACCCCCTCAACAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 3 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAATCCTGGGACATGTTG +
Preference number: 3 (lower is better)
Translates to: LCFPHCLATLSG*PRGWSKSWDML
Trigger: CAACATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp TGCAAGAGACCACAGAGCAGGGCCAGGTCCGACCTCTaGACCATGAGCATCCCCTGGGACTTAACAACCCAC +
Preference number: 3 (lower is better)
Translates to: CKRPQSRARSDL*TMSIPWDLTTH
Trigger: GTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAGAGGTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCATG +
Preference number: 3 (lower is better)
Translates to: AGVVSTKAWKGT*CLSLRAFGCAM
Trigger: CATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GCCTCTCACCCTTCTCCCGACCAACCCCCAAGGGCATaGCTCTGGCTTCATGAACCTTCGGGGGAAATTAGC +
Preference number: 3 (lower is better)
Translates to: ASHPSPDQPPRA*LWLHEPSGEIS
Trigger: GCTAATTTCCCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTGGTCGGGAGAAGGGTGAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp CAGGTTCCTCCATCTTCATGTGGCCACCACGGCTGTTaGAGAGTCCACGGTAAGAGCCAGGACGTGGCTTCC +
Preference number: 3 (lower is better)
Translates to: QVPPSSCGHHGC*RVHGKSQDVAS
Trigger: GGAAGCCACGTCCTGGCTCTTACCGTGGACTCTGCAACAGCCGTGGTGGCCACATGAAGATGGAGGAACCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp CCCCAGGAGCCCAAAGATCTGGTTGTTCTCTTGAGATaGAGAGAGGAGGCCCACAGGTGGCGGAGGGGTGAA +
Preference number: 3 (lower is better)
Translates to: PQEPKDLVVLLR*REEAHRWRRGE
Trigger: TTCACCCCTCCGCCACCTGTGGGCCTCCTCTCTGCATCTCAAGAGAACAACCAGATCTTTGGGCTCCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp TCAAGAGGAAGTGTGTCTGGCTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: SRGSVSGLQRCP*AWTGPRCVLQP
Trigger: GGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CCACTGCTAGACAGCAATGGTCGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAGGACGGTCTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: PLLDSNGRYPRI*ALMGLQDGLLK
Trigger: TTTGAGGAGACCGTCCTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CGGCTGATGGCTGAGGTCAGCGGTCTCTTCCCTGAGTaGCAGGTGTGGTCCCTGGGACTTCATAAACCATCC +
Preference number: 3 (lower is better)
Translates to: RLMAEVSGLFPE*QVWSLGLHKPS
Trigger: GGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGACCGCTGACCTCAGCCATCAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp AATTGGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTaGTGGCCTGAGGTGGGGTTGTGGTGGGCCTTGTCC +
Preference number: 3 (lower is better)
Translates to: NWKGPSWQDRSS*WPEVGLWWALS
Trigger: GGACAAGGCCCACCACAACCCCACCTCAGGCCACCAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp TTGGAGAAGGAGGGCAGCCAAAGGCCACGCAGAAATTaGGGGTTCAAGGTTTGCCCAGCCGGCCCCAAAGGT +
Preference number: 3 (lower is better)
Translates to: LEKEGSQRPRRN*GFKVCPAGPKG
Trigger: ACCTTTGGGGCCGGCTGGGCAAACCTTGAACCCCCAATTTCTGCGTGGCCTTTGGCTGCCCTCCTTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGGGACAAAGCAGATCATaGTCAGAGGATCTTGCAAAC +
Preference number: 3 (lower is better)
Translates to: LRDNREPGLPEARPLKSVGQSRS*SEDLAN
Trigger: GTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCC...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAAAGAGGGAGAGTCTGTaGGGAAGACCTCATTCCCAC +
Preference number: 3 (lower is better)
Translates to: SPSVPLAVPWLACRRDARKRESL*GRPHSH
Trigger: GTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCTT...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: LIPEPASSSCPDALPTPAKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGATCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGSSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: LIPEPASSSCPDALPTPASSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR TCA 72 bp TCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTaGGACCCCGCGAGCACTCGTCAATTCTCCCATCAC +
Preference number: 3 (lower is better)
Translates to: SQLLRVNRPFPE*DPASTRQFSHH
Trigger: GTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp GTAAGTGGTGACCTCCGCTTTCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCCAGCAGTGCCCACCCT +
Preference number: 3 (lower is better)
Translates to: VSGDLRFPAEEH*FEVAWPSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGGAAAGCGGAGGTCACCACTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GACCAGAAGAATCACCCTGCCCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACTGTTGCAGGCCACCGA +
Preference number: 3 (lower is better)
Translates to: DQKNHPAQTADS*PRSVLTVAGHR
Trigger: TCGGTGGCCTGCAACAGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTGGGCAGGGTGATTCTTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CTGCAGGGCCCACACCACCCTTCTGATGGAGAGCTTTaGACATGCATTCACACACACATGCCTGGCGGGATC +
Preference number: 3 (lower is better)
Translates to: LQGPHHPSDGEL*TCIHTHMPGGI
Trigger: GATCCCGCCAGGCATGTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGGCCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp CCACATGGCCTCACCCAGGGGCCAGTGGGGTGGCTTTaGTCATTTGAGGGTGTGCAGGGTACATATGTGTCT +
Preference number: 3 (lower is better)
Translates to: PHGLTQGPVGWL*SFEGVQGTYVS
Trigger: AGACACATATGTACCCTGCACACCCTCAAATGAGCAAAGCCACCCCACTGGCCCCTGGGTGAGGCCATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp TGGCAGATGCCTTTCCATCGGCATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCG +
Preference number: 3 (lower is better)
Translates to: WQMPFHRHPSCG*GRFGKCVWLTP
Trigger: CGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAGGCATCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp AAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTT +
Preference number: 3 (lower is better)
Translates to: KGRAAGVVSTKA*KGTCCLSLRAF
Trigger: AAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp ACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTaGCAGGAGTGGGCAGAATGGGGTGCATTTTACAGA +
Preference number: 3 (lower is better)
Translates to: THAWRDRRGWVS*QEWAEWGAFYR
Trigger: TCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CCA 72 bp CTGGGCTGTATCCAGGGAACCAGCTGCCGGACAAATTaGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTGG +
Preference number: 3 (lower is better)
Translates to: LGCIQGTSCRTN*KGPSWQDRSSW
Trigger: CCAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGATACAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp GCCCGCCAGGTGGCACCTATGTTCTCTTGCCCGGCGTaGGTGACTACACAGTTGTCATTTACGGGGGAAGTA +
Preference number: 3 (lower is better)
Translates to: ARQVAPMFSCPA*VTTQLSFTGEV
Trigger: TACTTCCCCCGTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCCACCTGGCGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp GTTTTCCACGAGGTCAGCAGCAGGTGTCTCCTGGTCTaGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTT +
Preference number: 3 (lower is better)
Translates to: VFHEVSSRCLLV*RGHGSGHRSGL
Trigger: AAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCAGACCAGGAGACACCTGCTGCTGACCTCGTGGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: DLSILFLPPKHSGSKARGGSVSG*QRCPWA
Trigger: GGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 3 (lower is better)
Translates to: QLMASEVLAGPRGADLTGSWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 3 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDSWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGGGTGGCTTTGCTCATTaGAGGGTGTGCAGGGTACAT +
Preference number: 3 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRGGFAH*RVCRVH
Trigger: ATGTACCCTGCACACCCTCAAATGAGCAAAGCCACC...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp GCAGCCTGGCTTAGAAACAAGGGACGAAGTGGATCCTaGGGCTCATTCCCTGGGGACTCCAAGAATGGGGCA +
Preference number: 3 (lower is better)
Translates to: AAWLRNKGRSGS*GSFPGDSKNGA
Trigger: TGCCCCATTCTTGGAGTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCCCTTGTTTCTAAGCCAGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp ATGATGCTGCGTCTGGGCTGTATCCAGGGAACCAGCTaGCGGACAAATTGGAAGGGACCTTCTTGGCAGGAC +
Preference number: 3 (lower is better)
Translates to: MMLRLGCIQGTS*RTNWKGPSWQD
Trigger: GTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGATACAGCCCAGACGCAGCATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp GTGGTGGGAATGAAGCCTCTCAGACCGTCCATGCCGTaGTTCCCTTCGTTAATGCAGATCGTCCACCCTGCA +
Preference number: 3 (lower is better)
Translates to: VVGMKPLRPSMP*FPSLMQIVHPA
Trigger: TGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATTCCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CCA 72 bp ACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTGGGCCTGGACAGGACC +
Preference number: 3 (lower is better)
Translates to: TPRERGLKRKCV*LAKMSLGLDRT
Trigger: GGTCCTGTCCAGGCCCAGGGACATCTTTGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: PSCGWGRFGKCV*LTPRERGLKRK
Trigger: CTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGG +
Preference number: 3 (lower is better)
Translates to: FPSASQLWLGTF*EVCLAHSERTR
Trigger: CCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CGCAGAGGATGGGTCTCGTGGCAGGAGTGGGCAGAATaGGGTGCATTTTACAGAAGAGTCACAGAGAGGCTC +
Preference number: 3 (lower is better)
Translates to: RRGWVSWQEWAE*GAFYRRVTERL
Trigger: GAGCCTCTCTGTGACTCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTGCCACGAGACCCATCCTCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRGSVSG*QRCPWA
Trigger: GGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACG +
Preference number: 3 (lower is better)
Translates to: WPRGELQVWCPPRLGKALFWEVC*AHSERT
Trigger: CGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAA...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAGCCCAGCCACGTGACTaGCTGTGGCCAAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: YPLFARSGGGKARSLMTEAQPRD*LWPRGE
Trigger: CTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGGC...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GATAAACATTACAAGCGCCAGCTCCTCAAGCCTGACTaGTCTTCCGCCTCTCTATCCCCACATCGGTTGGGC +
Preference number: 3 (lower is better)
Translates to: DKHYKRQLLKPD*SSASLSPHRLG
Trigger: GCCCAACCGATGTGGGGATAGAGAGGCGGAAGAGCAGTCAGGCTTGAGGAGCTGGCGCTTGTAATGTTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CATGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: HVRVCVCVCVCV*AFSQGTSPPSS
Trigger: AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACACACACGCACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp TTAGGCTGCACCCCTGCACATATGTGTGTGTGTGTGTaGATGCGTGCGTGTGTGCATGTGCGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LGCTPAHMCVCV*MRACVHVRVCV
Trigger: CACACACACACGCACATGCACACACGCACGCATGCACACACACACACACATATGTGCAGGGGTGCAGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp GAAATGCGACACACTATACTTAAAAGGCCAGATGGCTaGAGGCTGTTTGCACCCCTGGCTCTGCCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: EMRHTILKRPDG*RLFAPLALPRD
Trigger: GTCCCTGGGCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp AAAAGTGTGGCCCGCCAGGTGGCACCTATGTTCTCTTaGCCGGCGTGGGTGACTACACAGTTGTCATTTACG +
Preference number: 3 (lower is better)
Translates to: KSVARQVAPMFS*PAWVTTQLSFT
Trigger: CGTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCCACCTGGCGGGCCACACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp GATGTGGAAGGAGCCAGAACAGGGCTGCAGACAGGATaGTCTCTCATAGAAGGACCCCAGAGAACTTCCCCT +
Preference number: 3 (lower is better)
Translates to: DVEGARTGLQTG*SLIEGPQRTSP
Trigger: AGGGGAAGTTCTCTGGGGTCCTTCTATGAGAGAGCATCCTGTCTGCAGCCCTGTTCTGGCTCCTTCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp CAGCAGTGCCCACCCTCCAGGGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCTGGTCCCCATGATGGT +
Preference number: 3 (lower is better)
Translates to: QQCPPSREKSFE*EEAFYPGPHDG
Trigger: ACCATCATGGGGACCAGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTCCCTGGAGGGTGGGCACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp GACGGTCTCCTCAAAAGGCTCTTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGCTGGACGACCTGGGTT +
Preference number: 3 (lower is better)
Translates to: DGLLKRLLGRQT*ELGSTCWTTWV
Trigger: AACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTGAGGAGACCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CACCCTTCTCCCGACCAACCCCCAAGGGCATGCCTCTaGCTTCATGAACCTTCGGGGGAAATTAGCTTTCTA +
Preference number: 3 (lower is better)
Translates to: HPSPDQPPRACL*LHEPSGEISFL
Trigger: TAGAAAGCTAATTTCCCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTGGTCGGGAGAAGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: AELHHASTFKYAHTRTPAKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAATCTCTGCTTTCCTCATaGCCTGGCGACGCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQSLLSS*PGDAVW
Trigger: CCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGA...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRGSVSG*QRCPWA
Trigger: GGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGATTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACG +
Preference number: 3 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGFWEVC*AHSERT
Trigger: CGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAA...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 3 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCAAGAGGGAGAGTCTGTaGGGAAGACCTCATTCCCAC +
Preference number: 3 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPKRESL*GRPHSH
Trigger: GTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCTT...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTCTGAGGAACACTGCTTaGAAGTGGCATGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: VALVKASHFGDLHVPLFVLRNTA*KWHGPA
Trigger: TGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAG...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTCGAGCCTGACCACGTaGCCTCTTGGGTGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: QESTNFGQTISRLWVWPWSSLTT*PLGCQH
Trigger: GTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGA...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR TCA 72 bp GGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTaGAGGCTTCCCACTTTGGTGACTTGCATGTGCCCC +
Preference number: 3 (lower is better)
Translates to: GQTISRLWVWPW*RLPTLVTCMCP
Trigger: GGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR GCA 72 bp GGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCTAAGCTGGCTGGGAGT +
Preference number: 3 (lower is better)
Translates to: GIWSPRSRSGFL*KWLDTSKLAGS
Trigger: ACTCCCAGCCAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TTTATGGCAGATGCCTTTCCATCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCAC +
Preference number: 3 (lower is better)
Translates to: FMADAFPSASQL*LGTFWEVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAGGCATCTGCCATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTGGCTGGGAGTTCTCAC +
Preference number: 3 (lower is better)
Translates to: WSPRSRSGFLCK*LDTSKLAGSSH
Trigger: GTGAGAACTCCCAGCCAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTaGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: PRRTRWRISGGI*SPRSRSGFLCK
Trigger: TTTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGAAGCCGAGAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: QTWELGSTCWTT*VHGEKRSREGG
Trigger: TCCACCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CCTCAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTaGAAGTACCTGCTGGACGACCTGGGTTCATGGAGA +
Preference number: 3 (lower is better)
Translates to: PQKALRQTDLGT*KYLLDDLGSWR
Trigger: TCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGACCAGGTGTCCTTGTCTaGGTTGGTCAGCTAATACAC +
Preference number: 3 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGPGVLV*VGQLIH
Trigger: GTGTATTAGCTGACCAACCAAGACAAGGACACCTGG...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 3 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 3 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp ACTGTGGTCGCTCTCACGTCCGACCACCTGAGAAGCTaGCTTACATATCTGAGTTCACAGGTCCTGAAGGGA +
Preference number: 3 (lower is better)
Translates to: TVVALTSDHLRS*LTYLSSQVLKG
Trigger: TCCCTTCAGGACCTGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp CTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCATGGAGAAAAGAGAAGC +
Preference number: 3 (lower is better)
Translates to: LLGRQTWELGST*WTTWVHGEKRS
Trigger: GCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACTTCTGTCACTTCCAGA +
Preference number: 3 (lower is better)
Translates to: RSTAAFQELTFL*VAVDLTSVTSR
Trigger: TCTGGAAGTGACAGAAGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp TTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGA +
Preference number: 3 (lower is better)
Translates to: LGRQTWELGSTC*TTWVHGEKRSR
Trigger: TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CCA 72 bp CCAGTTAGAGCGCTGACCTCCCATCTCAGGACTTCTTaGCCCTTGCCCATTGCCATACTCTACTGTCAGATT +
Preference number: 3 (lower is better)
Translates to: PVRALTSHLRTS*PLPIAILYCQI
Trigger: AATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATGGGAGGTCAGCGCTCTAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR-3UTR CAA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGACTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 3 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGLYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGATCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRSSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCCAGGTGTCCTTGTCTaGGTTGGTCAGCTAATACAC +
Preference number: 3 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFPGVLV*VGQLIH
Trigger: GTGTATTAGCTGACCAACCAAGACAAGGACACCTGG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp CTGTTGTCAGTACAGTTTTATTTGCTGTGGAATCCATaGGAGCCGGAAGCATCGTTGGGGCCGTGGCTAGCA +
Preference number: 3 (lower is better)
Translates to: LLSVQFYLLWNP*EPEASLGPWLA
Trigger: TGCTAGCCACGGCCCCAACGATGCTTCCGGCTCTCATGGATTCCACAGCAAATAAAACTGTACTGACAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp CTTCATGAACCTTCGGGGGAAATTAGCTTTCTAGTTTaGGGGCGGTTCCCTCTGACTGGAGACAGGACAGAA +
Preference number: 3 (lower is better)
Translates to: LHEPSGEISFLV*GRFPLTGDRTE
Trigger: TTCTGTCCTGTCTCCAGTCAGAGGGAACCGCCCCCAAACTAGAAAGCTAATTTCCCCCGAAGGTTCATGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAACATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 3 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGACTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 3 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRLYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGGACAAAGCAGATCATaGTCAGAGGATCTTGCAAAC +
Preference number: 3 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMGQSRS*SEDLAN
Trigger: GTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 3 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNLYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATGGACAAAGCAGATCATaGTCAGAGGATCTTGCAAAC +
Preference number: 3 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNGQSRS*SEDLAN
Trigger: GTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCC...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR GCA 72 bp GACCTCCCATCTCAGGACTTCTTGGCCCTTGCCCATTaGCATACTCTACTGTCAGATTTTAAAACTGCTAGA +
Preference number: 3 (lower is better)
Translates to: DLPSQDFLALAH*HTLLSDFKTAR
Trigger: TCTAGCAGTTTTAAAATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATGGGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CCA 72 bp TGTCTTGGTTGGTCAGCTAATACACTACCACGTCCCTaGGACAAAGCAGATCATTGTCAGAGGATCTTGCAA +
Preference number: 3 (lower is better)
Translates to: CLGWSANTLPRP*DKADHCQRILQ
Trigger: TTGCAAGATCCTCTGACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGTATTAGCTGACCAACCAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp CCCCAAAAGTGCTGGAGGAAAGATGGTTGCATGACTTaGCCTCTCTTTGAACTTGAAATGCTACCTTCCTAC +
Preference number: 3 (lower is better)
Translates to: PQKCWRKDGCMT*PLFELEMLPSY
Trigger: GTAGGAAGGTAGCATTTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCACTTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 3 (lower is better)
Translates to: KWKSLTISRCPCLGWSANHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR-3UTR CAA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGGTGTCCACCAAGGCTaGGAAAGGCACTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: LSMRTHVRQPITLSVILKGVHQG*ERHLLS
Trigger: AGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR TCA 72 bp CCTTACCCCAAAAGTGCTGGAGGAAAGATGGTTGCATaGCTTGACCTCTCTTTGAACTTGAAATGCTACCTT +
Preference number: 3 (lower is better)
Translates to: PYPKSAGGKMVA*LDLSLNLKCYL
Trigger: AAGGTAGCATTTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCACTTTTGGGGTAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR GCA 72 bp TCTTTGAACTTGAAATGCTACCTTCCTACCCGGAAATaGGACACACTATACTTAAAAGGCCAGATGGCTGCA +
Preference number: 3 (lower is better)
Translates to: SLNLKCYLPTRK*DTLYLKGQMAA
Trigger: TGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTAGGAAGGTAGCATTTCAAGTTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR-3UTR CAA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 3 (lower is better)
Translates to: KWKSLTISRCPCLGWSANSWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGCCCGCAGGGGTGGGCTaGGGCCCTCCCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVPAGVG*GPPSLC
Trigger: ACAGAGGGAGGGAGGGCCCCAGCCCACCCCTGCGGG...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCCGGCCAGCGCCGCGCTaGTGGGCGAGAGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLRPAPR*WARGRR
Trigger: CCTTCTGCCTCTCGCCCATCAGCGCGGCGCTGGCCG...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCCGTGCCCAGGGCCTCTaGGGAGGTCCCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLRAQGL*GGPLNP
Trigger: GGGGTTGAGGGGACCTCCTCAGAGGCCCTGGGCACG...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTCCGAGCCGGGATGGTaGCCGGTGCACTCCACCGCG +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLSEPGW*PVHSTA
Trigger: CGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGA...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCGTGCCCAGGGCCTCTaGGGAGGTCCCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGRAQGL*GGPLNP
Trigger: GGGGTTGAGGGGACCTCCTCAGAGGCCCTGGGCACG...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACCGGGATGGTGGCCGGTaGACTCCACCGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDRDGGR*TPPRAW
Trigger: CCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCG...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGCAAAGGCGGCGTGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: GNLDPGQGRADDRMQRRRGPRPR*APPGPT
Trigger: TGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCC...ACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGGTCGGGGAGGGCTGGTaGGAGGCTCCTGAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWVGEGW*EAPELR
Trigger: CCGGAGCTCAGGAGCCTCCCACCAGCCCTCCCCGAC...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCCCTCTGGCGCAGGGCTaGCGAGCATGCGGTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLPLAQG*RACGLE
Trigger: TTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGG...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGGCTGTTTGCACCCCTaGCTCTGCCCAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLGCLHP*LCPGTP
Trigger: GGGTGTCCCTGGGCAGAGCCAGGGGTGCAAACAGCC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACCGCTGCCCAGCTGTGTaGCAAGGGCACTCCCTAGGC +
Preference number: 4 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDRCPAV*QGHSLG
Trigger: GCCTAGGGAGTGCCCTTGCCACACAGCTGGGCAGCG...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGGGGAGCAGCAGGGGTaGGAAGCTGTAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDGEQQG*EAVGPG
Trigger: TCCTGGCCCTACAGCTTCTCACCCCTGCTGCTCCCC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCAGCCCATGGGGAGCGTaGGGTGCGAGCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSSPWGA*GASSAR
Trigger: CCGTGCACTGCTCGCACCTCACGCTCCCCATGGGCT...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACCAGTCCTGGCTCCACTaGCTTAGGCTGCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDQSWLH*LRLHPC
Trigger: GCAGGGGTGCAGCCTAAGTCAGTGGAGCCAGGACTG...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCACGATGCACACGGCTaGTGGCTGAGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSHDAHG*WLRSAV
Trigger: GACCGCTGACCTCAGCCATCAGCCGTGTGCATCGTG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGAGAGCTCTCCGTCCTaGGCTCGCTGCCCCTCACGA +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGESSPS*ARCPSR
Trigger: TCGTGAGGGGCAGCGAGCTCAGGACGGAGAGCTCTC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCAGCCACCGCCAGCCCTaGGGGCTGCGGGACAACAGA +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSSHRQP*GLRDNR
Trigger: TCTGTTGTCCCGCAGCCCTCAGGGCTGGCGGTGGCT...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCTGCTGCGCCCAGCCTaGGGCCCTGGACCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWLLRPA*GPGPLL
Trigger: CAAAAGGGGTCCAGGGCCTCAGGCTGGGCGCAGCAG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGTACTCCTTTCGCTTCTaGAGCCGCAGCGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TLHVHVQQAEPGGKPRPGYSFRF*SRSASR
Trigger: GCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTA...CCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTGGCAGAAGAGCATCTaGAGGCCGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLWQKSI*RPSSPS
Trigger: GCTGGGCGAGGACGGCCTGCAGATGCTCTTCTGCCA...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTACAGATCGTGCAGGCTaGAGGGGATCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSTDRAG*RGSGAG
Trigger: TCCTGCCCCGGATCCCCTGCAGCCTGCACGATCTGT...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCTCAGGTGCGGTGGCTaGGCGTTCCACTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSLRCGG*AFHCSV
Trigger: AACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCCCCAGCCACGTGACTTaGTGTGGCCAAGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLPSHVT*CGQGES
Trigger: GCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGG...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGATGGGGAGCGTGAGGTaGGAGCAGTGCACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLMGSVR*EQCTVG
Trigger: CCCCACCGTGCACTGCTCGCACCTCACGCTCCCCAT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGGCTGGTCCGAGAGGTaGAGACCTCACTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGGWSER*RPHWGP
Trigger: CGGACCCCAGTGAGGTCTGCACCTCTCGGACCAGCC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTGGCTGCAGGCTGTTTaGACCCCTGGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLWLQAV*TPGSAQ
Trigger: CTGGGCAGAGCCAGGGGTGCAAACAGCCTGCAGCCA...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGGCACAGAGCCTGCCGTaGTTTGACCCAGCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVAQSLP*FDPASP
Trigger: GGGACTTGCTGGGTCAAAGCACGGCAGGCTCTGTGC...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCCGGCTCGTCCCAGCGTaGGGTCTGCAGGAGGCCGTT +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSRLVPA*GLQEAV
Trigger: AACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCG...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACGGAGGGAGCGCATGTaGCCCAGGTCCACGCGGAAC +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARRRERM*PRSTRN
Trigger: GTTCCGCGTGGACCTGGGCCACATGCGCTCCCTCCG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGCCCACTGCTCCTCCTaGGGCCTAGTCCGTGGGACC +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARAHCSS*GLVRGT
Trigger: GGTCCCACGGACTAGGCCCCAGGAGGAGCAGTGGGC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCGGGAGCTCTCGGGTGTaGTGTAGCGCAGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSGSSRV*CSAGPP
Trigger: AGGAGGCCCTGCGCTACATCACACCCGAGAGCTCCC...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGCACCAGAAGGTGTCTaGCTCATCCAGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSAPEGV*LIQDLG
Trigger: GCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGC...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCACACGGCTGATGGCTaGGGTCAGCGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLHTADG*GQRSLP
Trigger: GGGAAGAGACCGCTGACCTCAGCCATCAGCCGTGTG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCCAGGGGCGAGCCGATaGCCGCATGCAAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: VLPFVNADRPPCTSTSSRPGASR*PHAKAA
Trigger: CGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGG...CCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGGGCTCGTCAAGACCTaGCCGGGTCCCGCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGGLVKT*PGPAAG
Trigger: CCCCGCAGCGGGACCCGGGCAGGTCTTGACGAGCCC...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp AGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: RSSTLHVHVQQAEPGGKPMLSSG*VSEDGS
Trigger: GCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCAT...AGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACTACTCCTTTCGCTTCTaGAGCCGCAGCGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDYSFRF*SRSASR
Trigger: GCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTA...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCAGCCGCTGTCCCACATaGCTGACCCGCACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLSRCPT*LTRTAY
Trigger: GTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCT...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCGGGATGGTGGCCGGTaGACTCCACCGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSERDGGR*TPPRAW
Trigger: CCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGGCACGTGTGCATGCATaGATGCACGCAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVARVHA*MHAGTH
Trigger: GTGTGTCCCTGCGTGCATGCATGCATGCACACGTGC...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCTGGCGTCTGCAGGCTaGCCTTGGGCTGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALLASAG*PWAATG
Trigger: CCCCGTGGCAGCCCAAGGGCAGCCTGCAGACGCCAG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCTGAGGAGCTGCCCTaGCCAGTCCCGTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWPEELP*PVPLPW
Trigger: CCAAGGCAACGGGACTGGGCAGGGCAGCTCCTCAGG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCATCCAGGCCGCCGTGGTaGAAGTGGAAAACCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPSRPPW*KWKTLY
Trigger: GTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGA...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CGAGCCGATGACCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCCCCGCTCCTCCGACGTaGACTCGTGGCTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: RADDRMQRRRVVPALGGFPAPPT*TRGCNS
Trigger: GCTATTACAGCCACGAGTCCACGTCGGAGGAGCGGG...GAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACTTCCAGGCACTGGGGTaGGAGCGAGGCTCCCAGTTG +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDFQALG*ERGSQL
Trigger: CAACTGGGAGCCTCGCTCCCACCCCAGTGCCTGGAA...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCCTGGGGCCTAGTCCGTaGGACCTGCCCAGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALLGPSP*DLPSQP
Trigger: AGGCTGGCTGGGCAGGTCCCACGGACTAGGCCCCAG...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCTGGTGGGAGGCTCCTaGGCTCCGGGTGCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFLVGGS*APGAPA
Trigger: GGCCGGCGCACCCGGAGCTCAGGAGCCTCCCACCAG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCGCTCATTCAGGTGGTTaGGCCAGGCGGAGACGCCGA +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSAHSGG*ARRRRR
Trigger: TCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGC...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GATGACCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGCTCATTCAGGTGGTTaGGCCAGGCGGAGACGCCGA +
Preference number: 4 (lower is better)
Translates to: DDRMQRRRVVPALGGFRLAHSGG*ARRRRR
Trigger: TCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGC...GAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGRPGVS*RRSCSA
Trigger: TGCAGAACACGATCTTCGTCAGCTCACCCCGGGACG...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGCTTTCCGGGGAACTCCCGCTTaGAGCACAGAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RMQRRRVVPALGGFRLAFRGTPA*STEGAS
Trigger: GCTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCG...GAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCTCGACGCAGTGGGTaGGTGAGGCCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWPRRSG*VRPSSP
Trigger: AGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCAATCTGGTTGTTCTCTTaGGATGCAGAGAGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPIWLFS*DAERRP
Trigger: GGGCCTCCTCTCTGCATCTCAAGAGAACAACCAGAT...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAGGGCGCACACCCGCTaGGGCTCGTCCCAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPARAHTR*GSSQRG
Trigger: CCCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCT...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCGAGCCTCTTGTACATaGTCTCCTCGGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: TLHVHVQQAEPGGKPRPGRASCT*SPRGAS
Trigger: AGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCG...CCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTAAGCCGAAGCCGTCCTaGGGCGTCTTTGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSKPKPS*GVFGPF
Trigger: GAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTT...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACTCAGGTGCGGTGGCTaGGCGTTCCACTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARLRCGG*AFHCSV
Trigger: AACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPADPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGCACGTGTGCATGCATaGATGCACGCAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLARVHA*MHAGTH
Trigger: GTGTGTCCCTGCGTGCATGCATGCATGCACACGTGC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLVPWLA*RRDARD
Trigger: GTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCAC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTTGGGCTGCCACGGGGCCCTGTTTGCCCAGCACAGAGCCTGCCGTGCTTTGACGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: LGLPRGPVCPAQSLPCFDAWKGT*CLSLRA
Trigger: GGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGC...GTCAAAGCACGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGCAGCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGGCTGGTCCGAGAGGTaGAGACCTCACTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALGWSER*RPHWGP
Trigger: CGGACCCCAGTGAGGTCTGCACCTCTCGGACCAGCC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACCTGCCCAGTCCCGTTaGCTTGGAGGCGGTGACATC +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARPAQSR*LGGGDI
Trigger: GATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTGCCCCAGTGCGCTCCTaGCTTGCTTCCCTAGAGCGA +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSAPVRS*LASLER
Trigger: TCGCTCTAGGGAAGCAAGGCAGGAGCGCACTGGGGC...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp AGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTGCAGATCGTCCACCCTaGACGTCCACGTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RSSTLHVHVQQAEPGGKPADRPP*TSTSSR
Trigger: CCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGC...AGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACT +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGRRTAA*GGGWRT
Trigger: AGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALGPRPR*APPGPT
Trigger: TGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGAGAAGGAGCCAGCGGTaGCAGAAGAGCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLHVHVQQAEPGGKPRPGRRSQR*QKSICR
Trigger: CCTGCAGATGCTCTTCTGCCACCGCTGGCTCCTTCT...CCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCACTCCACCGCGGGCATaGAGCCGCTGTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSTPPRA*SRCPTC
Trigger: GCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGT...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCCGAGCCGGGATGGTaGCCGGTGCACTCCACCGCG +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGSEPGW*PVHSTA
Trigger: CGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGA...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCTGGCTCCTTCACTGTaGTCGCTCTCACGTCCGACC +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLLAPSL*SLSRPT
Trigger: GGTCGGACGTGAGAGCGACCACAGTGAAGGAGCCAG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCCGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSRYPRI*ALMGLQ
Trigger: CTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCG...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAGTGCACGGTGGGGGTaGCACTTGGTGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGSARWG*HLVQRC
Trigger: GCATCTCTGCACCAAGTGCCACCCCCACCGTGCACT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGCGAGCAGTGCACGGTaGGGGTGGCACTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGASSAR*GWHLVQ
Trigger: CTGCACCAAGTGCCACCCCCACCGTGCACTGCTCGC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAAGAAGCCGGGCACACTaGCGTCTGCAGGCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARRSRAH*RLQAAL
Trigger: AAGGGCAGCCTGCAGACGCCAGTGTGCCCGGCTTCT...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCCCGGCCCCAAAGGTGTaGGGGTCCACATGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAPAPKV*GSTWPH
Trigger: GTGAGGCCATGTGGACCCCCACACCTTTGGGGCCGG...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTTGCAAAGGCGGCGTGTaGTACCGGCACTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSTLHVHVQQAEPGGKPCKGGV*YRHSVA
Trigger: AGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCA...AGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp CTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGACCTCCCCGCGGATTaGCACATCAATACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: LHVHVQQAEPGGKPRPGPDLPAD*HINTAK
Trigger: TTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTC...TGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp AATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAGCACCAGAAGGTGTCTaGCTCATCCAGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: NADRPPCTSTSSRLSQEGAPEGV*LIQDLG
Trigger: GCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGC...TCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp CGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGCTTTCGTCCTCGTCCCGGGGTaGGCTGACGAAGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: RMQRRRVVPALGGFRLAFVLVPG*ADEDRV
Trigger: AACACGATCTTCGTCAGCTCACCCCGGGACGAGGAC...GAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACGGGGAACTCCCGCTTaGAGCACAGAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGRGTPA*STEGAS
Trigger: GCTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCGTGCCCAGGGCCTCTaGGGAGGTCCCCTCAACCCC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGRAQGL*GGPLNP
Trigger: GGGGTTGAGGGGACCTCCTCAGAGGCCCTGGGCACG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCTCTTCCCAGAGGCCCTaGGCAACATCGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSSSQRP*ATSGDA
Trigger: AGCGTCGCCCGATGTTGCTCAGGGCCTCTGGGAAGA...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGTTGCTGTGGAATCCATaGGAGCCGGAAGCATCGTTG +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVLLWNP*EPEASL
Trigger: CAACGATGCTTCCGGCTCTCATGGATTCCACAGCAA...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCTGGGATCATCCTTCCTaGGGAGCTGCCCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSWDHPS*GAALPS
Trigger: ACTGGGCAGGGCAGCTCCTCAGGAAGGATGATCCCA...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCCGAGGCACGGCCCCTaGAAAGTGTGGCCCGCCAGG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAPRHGP*KVWPAR
Trigger: CCTGGCGGGCCACACTTTTCAGGGGCCGTGCCTCGG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGCGGCCCAGAGACATTaGCGGGCAAGTGTTTCCATC +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDAAQRH*RASVSI
Trigger: GATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGCAAAGGCGGCGTGGATGGAGAACTGCATaGATGTCTTATCGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: GNLDPGQGRADDRMQRRRGWRTA*MSYRGR
Trigger: TCGCCCCCGATAAGACATGCATGCAGTTCTCCATCC...ACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp ACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: TLHVHVQQAEPGGKPRPGRRMEN*MHVLSG
Trigger: CCCCGATAAGACATGCATGCAGTTCTCCATCCGCCG...CCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEMLSSG*VSEDGS
Trigger: GCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCAT...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGCTTTCCGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: RMQRRRVVPALGGFRLAFRQNAL*SSGVME
Trigger: CTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCG...GAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGTCCGTGGCCAGCTGCTaGTCGATGACGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLSVASC*SMTSSP
Trigger: CGGGGATGACGTCATCGAGCAGCAGCTGGCCACGGA...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGAGCTTACACAGATCGTaGAGGCTGCAGGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLSLHRS*RLQGIR
Trigger: CCGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGAGCCGCTGTCCCACATaGCTGACCCGCACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWSRCPT*LTRTAY
Trigger: GTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCT...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGCAGAGAGCCCTGAGTaGTGGCTCCTTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLAESPE*WLLHCG
Trigger: ACCACAGTGAAGGAGCCAGCACTCAGGGCTCTCTGC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVQTADS*PRSVLT
Trigger: AGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTG...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCCCGTGCCTTTGGCTGTaGCATGGCTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALPCLWL*HGWPAG
Trigger: TCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGG...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLAWKGT*CLSLRA
Trigger: GGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGGCTGCTCATGGAGCTaGCCTCCCACCTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLGCSWS*PPTFRP
Trigger: GGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCCCTCCCCTGACCCCTaGTGCACGGTTCCAAGGGCT +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALPSPDP*CTVPRA
Trigger: AGCCCTTGGAACCGTGCAGCAGGGGTCAGGGGAGGG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGAGGACCAGGAGACCTaGTCCATGGGCCAAACCGCC +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAEDQET*SMGQTA
Trigger: GGCGGTTTGGCCCATGGAGCAGGTCTCCTGGTCCTC...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCGGAGCCACCAGCCATaGCTGGTAGTGGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKRSHQP*LVVGAL
Trigger: GAGGGCACCCACTACCAGGCATGGCTGGTGGCTCCG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GATGACCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGAGCCGATGACCGCATaGAAAGGCGGCGTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: DDRMQRRRVVPALGGFRLEPMTA*KGGVWY
Trigger: GTACCACACGCCGCCTTTGCATGCGGTCATCGGCTC...GAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGGAGGTCCGAGGCTTTaGAGGAGGCCCTGCGAAGGA +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGGGPRL*RRPCEG
Trigger: TCCTTCGCAGGGCCTCCTCCAAAGCCTCGGACCTCC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACAAGCACAGGTAACCTaGGTGGTGCTCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGQAQVT*VVLPQP
Trigger: GGGCTGGGGGAGCACCACCCAGGTTACCTGTGCTTG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACT +
Preference number: 4 (lower is better)
Translates to: VLPFVNADRPPCTSTSSRRRTAA*GGGWRT
Trigger: AGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCG...CCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp CGAGCCGATGACCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCGCTCCTCGGGAGTCATaGAGAGCCTTTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RADDRMQRRRVVPALGGFAPRES*RAFSAG
Trigger: TCCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGC...GAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLGPRPR*APPGPT
Trigger: TGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGAGAAGGAGCCAGCGGTaGCAGAAGAGCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLRRSQR*QKSICR
Trigger: CCTGCAGATGCTCTTCTGCCACCGCTGGCTCCTTCT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCCCCGTTCATGTGCATaGCCAGGTTTCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSPRSCA*PGFRSA
Trigger: TGCACTTCGGAAACCTGGCCATGCACATGAACGGGG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGCAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGGGACGCTATTCCCCTaGAGCAGGCGGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEGTLFP*SRRVGK
Trigger: CTTCCCCACCCGCCTGCTCCAGGGGAATAGCGTCCC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGTCCGGGTCAGGTCTTaGGGAGCAGCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALVRVRS*GAAGVR
Trigger: TCTCACCCCTGCTGCTCCCCAAGACCTGACCCGGAC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCACGCGGGGTTTTTGGCTaGTTTCCTCTAATTGCATCC +
Preference number: 4 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPRGVFG*FPLIAS
Trigger: GGATGCAATTAGAGGAAACCAGCCAAAAACCCCGCG...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGGGACCTTCCAGGGCTaGCAAGCATCGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSGTFQG*QASSLT
Trigger: GGTCAGGCTCGATGCTTGCCAGCCCTGGAAGGTCCC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCGGAGGACACACAGCTaGGTGGGCGTGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKRRTHS*VGVWEC
Trigger: GCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGGCTGTTTGCACCCCTaGCTCTGCCCAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLGCLHP*LCPGTP
Trigger: GGGTGTCCCTGGGCAGAGCCAGGGGTGCAAACAGCC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTGTGTGGCCCGCCAGGTaGCACCTATGTTCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSVWPAR*HLCSLA
Trigger: GGCAAGAGAACATAGGTGCCACCTGGCGGGCCACAC...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGCTCATTCAGGTGGTTaGGCCAGGCGGAGACGCCGA +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEAHSGG*ARRRRR
Trigger: TCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGCACCAGAAGGTGTCTaGCTCATCCAGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAAPEGV*LIQDLG
Trigger: GCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGC...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCGGGGAACTCCCGCTTaGAGCACAGAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSERGTPA*STEGAS
Trigger: GCTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAGCCCATGGGGAGCGTaGGGTGCGAGCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPASPWGA*GASSAR
Trigger: CCGTGCACTGCTCGCACCTCACGCTCCCCATGGGCT...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACTCAGGGCCGAGACTTaGGTCAGAACCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARLRAET*VRTFWS
Trigger: GCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGGACGAAGTGGATCCTaGGGCTCATTCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLGRSGS*GSFPGD
Trigger: GTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTAAAGTGGGCGCTTGCTaGGCCCCTGGCCAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSKVGAC*APGQPP
Trigger: GGGAGGCTGGCCAGGGGCTCAGCAAGCGCCCACTTT...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCAGGGCCTCCTCGTCCTaGCTCTGGATGCGAGAGTTG +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSRASSS*LWMREL
Trigger: CAACTCTCGCATCCAGAGGCAGGACGAGGAGGCCCT...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVMLSSG*VSEDGS
Trigger: GCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCAT...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGACAGATCGTGCAGGCTaGAGGGGATCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRTDRAG*RGSGAG
Trigger: TCCTGCCCCGGATCCCCTGCAGCCTGCACGATCTGT...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGTCTTTGGGCCCTTCTTaGCTTCCCTCAGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLSLGPS*LPSGTW
Trigger: CCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGA...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGCACGCACGTGTGCATaGATGCATGCACGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGARTCA*MHARRD
Trigger: GTCCCTGCGTGCATGCATGCATGCACACGTGCGTGC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGGCCTGCAGGAGGGATaGAAGAGACCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALGLQEG*KRPQSR
Trigger: CCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGCTGTCTCTCCCTCCGTaGCTTTGGCTGTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLLSLPP*LWLCHG
Trigger: GCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAG...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCCCAGCCACGTGACTTaGTGTGGCCAAGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLPSHVT*CGQGES
Trigger: GCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCCTTGTCCTGATGCCCTaGCCACCCCCGCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQALVLMP*PPPPSF
Trigger: GAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAG...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCTGCAGGGCTGACCCGTaGAGGTGGGATCATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALCRADP*RWDHPS
Trigger: GGAAGGATGATCCCACCTGCACGGGTCAGCCCTGCA...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCCCTCTGGAGCCTGTaGGGCTGGTTGAGTGTAAAC +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWPLWSL*GWLSVN
Trigger: GTTTACACTCAACCAGCCGCACAGGCTCCAGAGGGG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGCCCACTTTGGTGACTTaGATGTGCCCCTCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVPTLVT*MCPSLL
Trigger: CAACAAAGAGGGGCACATGCAAGTCACCAAAGTGGG...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAAAATCGGTTTCCCTCTaGGGCTCTCTCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGKSVSL*GSLLPG
Trigger: GCCGGGGAGGAGAGAGCCGCAGAGGGAAACCGATTT...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAACTGGCTCTCTCGGCTaGCAACGACCAGCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGTGSLG*QRPAGR
Trigger: GCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGT...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACCCGCTCCTCCGACGTaGACTCGTGGCTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGPAPPT*TRGCNS
Trigger: GCTATTACAGCCACGAGTCCACGTCGGAGGAGCGGG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCAAGTGCAGGAGCATCTaGTCCGTGGCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAKCRSI*SVASCC
Trigger: GCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACTCCGAGCCGGGATGGTaGCCGGTGCACTCCACCGCG +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDSEPGW*PVHSTA
Trigger: CGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGA...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCTCTCCGAGCCGGGATaGTGGCCGGTGCACTCCACC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGLSEPG*WPVHST
Trigger: GGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACCATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDHPSCG*GRFGKC
Trigger: ACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATG...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCACAGACCTGGGAACTTaGAAGTACCTGCTGGACGAC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLTDLGT*KYLLDD
Trigger: GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGT...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLERTIK*QACPPP
Trigger: GGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGGGACGCTATTCCCCTaGAGCAGGCGGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGGTLFP*SRRVGK
Trigger: CTTCCCCACCCGCCTGCTCCAGGGGAATAGCGTCCC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGTCCGGGTCAGGTCTTaGGGAGCAGCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLVRVRS*GAAGVR
Trigger: TCTCACCCCTGCTGCTCCCCAAGACCTGACCCGGAC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAGAGATGCAGCTGATTaGTCCGGGTCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGRDAAD*SGSGLG
Trigger: CCCAAGACCTGACCCGGACCAATCAGCTGCATCTCT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACCTAATGCCTCTCGCTaGCTGGGAATAATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARPNASR*LGIIPG
Trigger: CCCCGGGATTATTCCCAGCCAGCGAGAGGCATTAGG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACTGAGGCTCATTCCCTaGGGACTCCAAGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARLRLIP*GLQEWG
Trigger: GCCCCATTCTTGGAGTCCCCAGGGAATGAGCCTCAG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGAACGGCCGTGCAGCCTaGCTTAGAAACAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLNGRAA*LRNKGR
Trigger: TCGTCCCTTGTTTCTAAGCCAGGCTGCACGGCCGTT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGGTCTCTTCCCTGAGTaGCAGGTGTGGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLGLFPE*QVWSLG
Trigger: TCCCAGGGACCACACCTGCCACTCAGGGAAGAGACC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGCATCGTTGGGGCCGTaGCTAGCAGAGCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALASLGP*LAELMV
Trigger: CACCATGAGCTCTGCTAGCCACGGCCCCAACGATGC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCAGGTGTCTCCTGGTCTaGAGAGGGCATGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSRCLLV*RGHGSG
Trigger: GCCACTTCCATGCCCTCTCCAGACCAGGAGACACCT...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp GTGGTGACCTCCGCTTTCCTGCTGAGGAACACTGCTTaGAAGTGGCATGGCCCAGCAGTGCCCACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVTSAFLLRNTA*KWHGPAVPTLQ
Trigger: CTGGAGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGGAAAGCGGAGGTCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CTTGGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: LGKALAVSPSVP*AVPWLACRRDA
Trigger: TGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CCCAGAGAACTTCCCCTCTGGAGCCTGTGCGGCTGGTaGAGTGTAAACGCTGAGTCATGCTCGCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PRELPLWSLCGW*SVNAESCSLPS
Trigger: GCTGGGCAGCGAGCATGACTCAGCGTTTACACTCAACCAGCCGCACAGGCTCCAGAGGGGAAGTTCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp CTTGGAGAAGGAGGGCAGCCAAAGGCCACGCAGAAATaGGGGGTTCAAGGTTTGCCCAGCCGGCCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGEGGQPKATQK*GVQGLPSRPQR
Trigger: CCTTTGGGGCCGGCTGGGCAAACCTTGAACCCCCAATTTCTGCGTGGCCTTTGGCTGCCCTCCTTCTCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGCTCATTCAGGTGGTTaGGCCAGGCGGAGACGCCGA +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGAHSGG*ARRRRR
Trigger: TCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCGTCTTTGTCCACAGTaGACTGCACATTACGCCAGA +
Preference number: 4 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSRLCPQ*TAHYAR
Trigger: TCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TTCGGGAGTGGTGGGAATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCCGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: FGSGGNEASQTVHAVLPFRPGVS*RRSCSA
Trigger: TGCAGAACACGATCTTCGTCAGCTCACCCCGGGACG...GAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATTCCCACCACTCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALRPGVS*RRSCSA
Trigger: TGCAGAACACGATCTTCGTCAGCTCACCCCGGGACG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCCGGGGAACTCCCGCTTaGAGCACAGAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGRGTPA*STEGAS
Trigger: GCTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCG...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACGATGGCCACGCAGATaGAAAGGTGGAAGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARRWPRR*KGGSSP
Trigger: CGGACTACTTCCACCTTTTCATCTGCGTGGCCATCG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGNPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGAGCCCATGGGGAGCGTaGGGTGCGAGCAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGSPWGA*GASSAR
Trigger: CCGTGCACTGCTCGCACCTCACGCTCCCCATGGGCT...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGATCTTCATCTTGTCCTaGTGCCCTGCCCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKIFILS*CPAHPR
Trigger: GCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGAT...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGGGAGTGCAGGTGTGCTaGCTCCGAACCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRGVQVC*LRTKGE
Trigger: CTCTCCCTTGGTTCGGAGTCAGCACACCTGCACTCC...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCGGCCCTTTCCCGAGTaGGACCCCGCGAGCACTCGT +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCRPFPE*DPASTR
Trigger: ACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGCCG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCCAGGTAGGTGGCAGGTaGGACAGGCCCTTCAGACAT +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALQVGGR*DRPFRH
Trigger: ATGTCTGAAGGGCCTGTCTCACCTGCCACCTACCTG...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTTTGCCTTGGAGGCGGTaGCATCAGGGGCCCCTGAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSLPWRR*HQGPLS
Trigger: GCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAA...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGTCCCCCTGCAGGGCTaGCCCGTGCAGGTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHVPLQG*PVQVGS
Trigger: TGATCCCACCTGCACGGGTCAGCCCTGCAGGGGGAC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCCGGGAGTGGTGGGAATaGAGCCTCTCAGACCGTCCA +
Preference number: 4 (lower is better)
Translates to: CFPSLMQIVHPARPRPAGREWWE*SLSDRP
Trigger: TGGACGGTCTGAGAGGCTTCATTCCCACCACTCCCG...GCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTAGATCCCGGAGGGGCTaGAAGCAGGCTGCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPRSRRG*KQAARL
Trigger: CAGCCTCGCAGCCTGCTTGCAGCCCCTCCGGGATCT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTTCCCAGCGTGGGGTCTaGAGGAGGCCGTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSSQRGV*RRPLLS
Trigger: GGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGA...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWRRMEN*MHVLSG
Trigger: CCCCGATAAGACATGCATGCAGTTCTCCATCCGCCG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGMLSSG*VSEDGS
Trigger: GCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCAT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCCGAGCCTCTTGTACATaGTCTCCTCGGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPARASCT*SPRGAS
Trigger: AGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCG...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGCAAAGGCGGCGTGTGTTGTCCACAGTGAACTaGACATTACGCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: NLDPGQGRADDRMQRRRVLSTVN*TLRQNA
Trigger: AGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAA...CACACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTAAGGCATCTCCACCGTaGCCCCGTAGGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALKASPP*PRRDSS
Trigger: AGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTT...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGGGGCCCGACCTATCTaGGGAAGCCGAAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGGARPI*GSRSRP
Trigger: AGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGSLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCCTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALLCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCGCAGAGAGCCCTGAGTaGTGGCTCCTTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSAESPE*WLLHCG
Trigger: ACCACAGTGAAGGAGCCAGCACTCAGGGCTCTCTGC...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKVPWLA*RRDARD
Trigger: GTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCAC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCCCCAGCCACGTGACTTaGTGTGGCCAAGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAPSHVT*CGQGES
Trigger: GCTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGG...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCATGGGGAGCGTGAGGTaGGAGCAGTGCACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAMGSVR*EQCTVG
Trigger: CCCCACCGTGCACTGCTCGCACCTCACGCTCCCCAT...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATGGGCCTTGTCCCCCTaGAGGGCTGACCCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAWALSP*RADPCR
Trigger: CCTGCACGGGTCAGCCCTGCAGGGGGACAAGGCCCA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCGCACCTATGTTCTCTTaGCCGGCGTGGGTGACTACA +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSAPMFS*PAWVTT
Trigger: TGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGC...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGCCAGTGGGGTGGCTTTaGTCATTTGAGGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWPVGWL*SFEGVQ
Trigger: CTGCACACCCTCAAATGAGCAAAGCCACCCCACTGG...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGAGAGCCCTGCATCTTaGCTGGGGCCCCTTGTATCT +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLESPAS*LGPLVS
Trigger: AGATACAAGGGGCCCCAGGCAAGATGCAGGGCTCTC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTCGGGAGTGGTGGGAATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCAAATCGGTTTCCCTCTaGGGCTCTCTCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: FGSGGNEASQTVHAVLPFKSVSL*GSLLPG
Trigger: GCCGGGGAGGAGAGAGCCGCAGAGGGAAACCGATTT...GAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATTCCCACCACTCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCTGGCAACGACCAGCTaGCCGCTGGTGCAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLALATTS*PLVQAS
Trigger: CGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGGCAGGAGGCGGAACTaGTACAGCAAACTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALGRRRN*YSKLLA
Trigger: GGCGAGGAGTTTGCTGTACCAGTTCCGCCTCCTGCC...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTACTCCACCGCGGGCATaGAGCCGCTGTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPTPPRA*SRCPTC
Trigger: GCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCTCTCCGAGCCGGGATaGTGGCCGGTGCACTCCACC +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFLSEPG*WPVHST
Trigger: GGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCGCGTCTCAGGTGCGGTaGCTGCGCGTTCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAASQVR*LRVPLQ
Trigger: CTGCAGTGGAACGCGCAGCCACCGCACCTGAGACGC...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCCAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLRCPWA*TGPRCV
Trigger: AACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALLQRCP*AWTGPR
Trigger: GCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAA...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPASASQL*LGTFWE
Trigger: TTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGACACTACCACGTCCCTaGGACAAAGCAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVTLPRP*DKADHC
Trigger: ACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGT...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGACCATGAGCATCCCCTaGGACTTAACAACCCACTGG +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLTMSIP*DLTTHW
Trigger: CCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGT...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGTCCGGGTCAGGTCTTaGGGAGCAGCAGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGVRVRS*GAAGVR
Trigger: TCTCACCCCTGCTGCTCCCCAAGACCTGACCCGGAC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTAGGTGCAGACCTCACTaGGGTCCGGGCCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGRCRPH*GPGQPM
Trigger: CATGGGCTGGCCCGGACCCCAGTGAGGTCTGCACCT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCTTCCGAGGTCCTGGCTaGTCCGAGAGGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLFRGPG*SERCRP
Trigger: AGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAA...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGGCCTCCAAAAGAGCTaGGCAACCTCTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLGLQKS*ATSASH
Trigger: GTGGCTGGCAGAGGTTGCCCAGCTCTTTTGGAGGCC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCTCCTCTGAGGCAAAGTaGCCTGCAGGGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVSSEAK*PAGAPA
Trigger: TGCAGGGGCCCCTGCAGGCCACTTTGCCTCAGAGGA...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCGGCTTCCAGGCAGGATaGGGAAGCACCTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVGFQAG*GSTSHS
Trigger: GGAGTGGGAGGTGCTTCCCCATCCTGCCTGGAAGCC...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCTCCTCCATCTTCATGTaGCCACCACGGCTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSSSIFM*PPRLLQ
Trigger: CTGCAACAGCCGTGGTGGCCACATGAAGATGGAGGA...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAGGGTCCGTCTCACTaGGACGAAGAGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGEGPSH*DEEGAQ
Trigger: CTGTGCCCCCTCTTCGTCCCAGTGAGACGGACCCTC...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GATGACCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTGGCTTCAGACTCGGTACCGGCACTCGGTaGCTTCAGACTCGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: DDRMQRRRVVPALGGFRLGTGTR*LQTRFH
Trigger: ATGAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACC...GAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
3UTR CAA 72 bp CAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTaGGAAAGGCACTTGCTGTCTCTCCCTCCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: QGESCRCGVHQG*ERHLLSLPPCL
Trigger: AAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CACACACCCCAGGAGCCCAAAGATCTGGTTGTTCTCTaGAGATGCAGAGAGGAGGCCCACAGGTGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: HTPQEPKDLVVL*RCREEAHRWRR
Trigger: CCTCCGCCACCTGTGGGCCTCCTCTCTGCATCTCAAGAGAACAACCAGATCTTTGGGCTCCTGGGGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGTCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 4 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLSRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCATGGCCGTGCAGGGCTaGTTATCCCCTATTTGCACG +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAMAVQG*LSPICT
Trigger: CGTGCAAATAGGGGATAATCAGCCCTGCACGGCCAT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCAATAAGCAGCATTGCTaGGGATGGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSNKQHC*GWPCRA
Trigger: AGCCCTGCACGGCCATCCTCAGCAATGCTGCTTATT...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCGGCAAGCATCGAGCCTaGCCACGTTGCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVGKHRA*PRCLLG
Trigger: ACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCC...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTGCTGCTATGGAAAACTaGAAGGTCAGAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSAAMEN*KVRGWR
Trigger: CCTCCACCCTCTGACCTTTCAGTTTTCCATAGCAGC...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCATCTTCATCTTGTCCTaGTGCCCTGCCCACCCCCGC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAIFILS*CPAHPR
Trigger: GCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGAT...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGAGCCTGCCGTGCTTTaGCCCAGCAAGTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGEPAVL*PSKSHR
Trigger: GCGGTGGGACTTGCTGGGTCAAAGCACGGCAGGCTC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACAGGCCCTTCAGACATaGGACCCGAGTGATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARQALQT*DPSDVD
Trigger: ATCTACATCACTCGGGTCTCATGTCTGAAGGGCCTG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCCCTGCCCAGTCCCGTTGCCTTGGAGGCGGTGACATCAGGGGCCCCTGAGCCATCTTTTGTCTCATGTTaGAGAGCTGATGACATCGGA +
Preference number: 4 (lower is better)
Translates to: ALPSPVALEAVTSGAPEPSFVSC*RADDIG
Trigger: TCCGATGTCATCAGCTCTTCAACATGAGACAAAAGA...TGGCTCAGGGGCCCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGGCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGTTTCCATCCTCCGCATaGGTCGGCCCGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRFPSSA*VGPGRA
Trigger: AGCCCTGCCCGGGCCGACGCATGCGGAGGATGGAAA...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGAGGGCGGGGTGCCTTaGGAACGGGGGAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIEGGVP*ERGSSR
Trigger: CCGAGAGCTCCCCCGTTCGCAAGGCACCCCGCCCTC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGCAGGATCCTCCTCATaGTCTCCACATTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDAGSSS*SPHWDC
Trigger: ACAATCCCAATGTGGAGAGCATGAGGAGGATCCTGC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGATGGTCCGTGGCCAGCTaGTGCTCGATGACGTCATCC +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGWSVAS*CSMTSS
Trigger: GGATGACGTCATCGAGCAGCAGCTGGCCACGGACCA...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCAGCTCCCCGTTCATGTaGATGGCCAGGTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPASSPFM*MARFPK
Trigger: CTTCGGAAACCTGGCCATGCACATGAACGGGGAGCT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAGAGGGCATGGAAGTGGCCACAGGTCTGGACTTCTCTGGGTGGATGTGAGGAGCTTACACAGATCGTaGAGGCTGCAGGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: WRGHGSGHRSGLLWVDVRSLHRS*RLQGIR
Trigger: CCGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCT...CCTCACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCAGCCGCTGTCCCACATaGCTGACCCGCACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGSRCPT*LTRTAY
Trigger: GTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCT...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCGGGATGGTGGCCGGTaGACTCCACCGCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIRDGGR*TPPRAW
Trigger: CCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRDPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACTCCTCAAGCCTGACTaGTCTTCCGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGLLKPD*SSASLS
Trigger: GGATAGAGAGGCGGAAGAGCAGTCAGGCTTGAGGAG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCAGAGAGCCCTGAGTaGTGGCTCCTTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKAESPE*WLLHCG
Trigger: ACCACAGTGAAGGAGCCAGCACTCAGGGCTCTCTGC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTCCGTGCCTTTGGCTGTaGCATGGCTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPPCLWL*HGWPAG
Trigger: TCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGG...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGACCGTGCCTTTGGCTGTaGCATGGCTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGPCLWL*HGWPAG
Trigger: TCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGG...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCACGTTGCCTCTTGGGTaGCAGCACGCCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPATLPLG*QHAHIK
Trigger: TTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGCCTGCAGGGGCCCCTaGAGAGCATACAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRACRGP*RAYREV
Trigger: CACCTCCCTGTATGCTCTGCAGGGGCCCCTGCAGGC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGTGTGTGTGTGTGTGTaGGCATTTTCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALVCVCV*AFSQGT
Trigger: GGTCCCCTGGGAAAATGCGCACACACACACACACAC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCATTCACACACACATaGCTGGCGGGATCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKAFTHT*LAGSQR
Trigger: CCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCACCGAGGGGTAGGACCTaGAGGGCCCACACCACCCTT +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAPRGRT*RAHTTL
Trigger: AAGGGTGGTGTGGGCCCTGCAGGTCCTACCCCTCGG...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACTTGCACCCCTGGCTCTaGCCAGGGACACCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDLHPWL*PGTPLS
Trigger: GGAGAGGGGTGTCCCTGGGCAGAGCCAGGGGTGCAA...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGGGCACACTGGCGTCTaGAGGCTGCCCTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSGHTGV*RLPLGC
Trigger: GCAGCCCAAGGGCAGCCTGCAGACGCCAGTGTGCCC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATCCTGAGGTCCGGAGCTaGTCTTCCTCCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHPEVRS*SSSWQP
Trigger: GGGCTGCCAGGAGGAAGAGCAGCTCCGGACCTCAGG...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTATCCAGGGAACCAGCTaGCGGACAAATTGGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSIQGTS*RTNWKG
Trigger: TCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGAT...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTGGGGGTTCAAGGTTTaGCCAGCCGGCCCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGWGFKV*PAGPKG
Trigger: ACCTTTGGGGCCGGCTGGGCAAACCTTGAACCCCCA...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGCTCCTCGGGAGTCATaGAGAGCCTTTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLAPRES*RAFSAG
Trigger: TCCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCGGCAGGAGGCGGAACTaGTACAGCAAACTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAGRRRN*YSKLLA
Trigger: GGCGAGGAGTTTGCTGTACCAGTTCCGCCTCCTGCC...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAACTCTCCGAGCCGGGATaGTGGCCGGTGCACTCCACC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQLSEPG*WPVHST
Trigger: GGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAG...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATCCTGGCGACGCTGTCTaGCTGCCCTCGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHPGDAV*LPSRVE
Trigger: CTCCACCCTCGAGGGCAGCCAGACAGCGTCGCCAGG...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAGAGGGAGAGTCTGTTaGGAAGACCTCATTCCCACA +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGRGRVC*EDLIPT
Trigger: TGTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCAACACTGCTTTGAAGTaGCATGGCCCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALNTALK*HGPAVP
Trigger: GGGCACTGCTGGGCCATGCCACTTCAAAGCAGTGTT...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCACCATGAGCATCCCCTaGGACTTAACAACCCACTGG +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSTMSIP*DLTTHW
Trigger: CCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGT...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGGGACGCTATTCCCCTaGAGCAGGCGGGTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRGTLFP*SRRVGK
Trigger: CTTCCCCACCCGCCTGCTCCAGGGGAATAGCGTCCC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGCGAGCAGTGCACGGTaGGGGTGGCACTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDASSAR*GWHLVQ
Trigger: CTGCACCAAGTGCCACCCCCACCGTGCACTGCTCGC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCTGGCTTCCGAGGTCCTaGCTGGTCCGAGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPWLPRS*LVREVQ
Trigger: CTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCA...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCAGATTAAGGGAGTTGTaGAGGGGCGGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPARLREL*RGGASP
Trigger: TGGAGAAGCCCCGCCCCTCCACAACTCCCTTAATCT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCCTAATGCCTCTCGCTaGCTGGGAATAATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEPNASR*LGIIPG
Trigger: CCCCGGGATTATTCCCAGCCAGCGAGAGGCATTAGG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACCAGAGGGCACAGCTTaGGCAGATTCCCATCATCTA +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARPEGTA*ADSHHL
Trigger: TAGATGATGGGAATCTGCCCAAGCTGTGCCCTCTGG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATGCACTCCCAGGAGGTaGCCTGGGCAGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLACTPRR*PGQAGI
Trigger: GATGCCTGCCTGCCCAGGCCACCTCCTGGGAGTGCA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCGGGATCGCAGAGGATaGGTCTCGTGGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGRDRRG*VSWQEW
Trigger: CCACTCCTGCCACGAGACCCATCCTCTGCGATCCCG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCGGGATCGCAGAGGATaGGTCTCGTGGCAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPARDRRG*VSWQEW
Trigger: CCACTCCTGCCACGAGACCCATCCTCTGCGATCCCG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTTCACACACACATGCCTaGCGGGATCGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALSHTHA*RDRRGW
Trigger: CCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGA...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCCCCATCTCAGAACATaGGAGAAGCCGGGCACACTG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEPHLRT*EKPGTL
Trigger: CAGTGTGCCCGGCTTCTCCCATGTTCTGAGATGGGG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAGAACTTCCCCTCTaGAGCCTGTGCGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSERELPL*SLCGWL
Trigger: CAACCAGCCGCACAGGCTCCAGAGGGGAAGTTCTCT...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGTGTGGGGGTCCACATaGCCTCACCCAGGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRVWGST*PHPGAS
Trigger: ACTGGCCCCTGGGTGAGGCCATGTGGACCCCCACAC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGGCCCCTTGTATCTCTaGCTCATGGCCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGGPLYL*LMACPG
Trigger: CCCAGGACAGGCCATGAGCCAGAGATACAAGGGGCC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGAGGAGGCCCACAGGTaGCGGAGGGGTGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHEEAHR*RRGEGG
Trigger: TCCTCCTTCACCCCTCCGCCACCTGTGGGCCTCCTC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTGCAGGCCTCGTCGCTaGAGAAAAGGCGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVCRPRR*RKGGGS
Trigger: GCTCCCTCCGCCTTTTCTTCAGCGACGAGGCCTGCA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGACCTCCCCGCGGATTaGCACATCAATACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLDLPAD*HINTAK
Trigger: TTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR TCA 90 bp AGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTCGTCTTTGTCCACAGTaGACTGCACATTACGCCAGA +
Preference number: 4 (lower is better)
Translates to: RSSTLHVHVQQAEPGGKPRLCPQ*TAHYAR
Trigger: TCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACG...AGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCCTCGACGCAGTGGGTaGGTGAGGCCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGPRRSG*VRPSSP
Trigger: AGGAGAGGAAGGCCTCACTCACCCACTGCGTCGAGG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCAGAAGCAACATGGATaGGAAGCCCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEQKQHG*EAHPIP
Trigger: GGGAATGGGGTGGGCTTCTCATCCATGTTGCTTCTG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGGGGAGCAGCAGGGGTaGGAAGCTGTAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQGEQQG*EAVGPG
Trigger: TCCTGGCCCTACAGCTTCTCACCCCTGCTGCTCCCC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGGGGAGCAGCAGGGGTaGGAAGCTGTAGGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSGEQQG*EAVGPG
Trigger: TCCTGGCCCTACAGCTTCTCACCCCTGCTGCTCCCC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGACTCAGGGCCGAGACTTaGGTCAGAACCTTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGLRAET*VRTFWS
Trigger: GCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAG...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCATGACTTGTGAGTTCTaGGTCCTCAGGGCCGAGACT +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAMTCEF*VLRAET
Trigger: AGTCTCGGCCCTGAGGACTCAGAACTCACAAGTCAT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCATGACTTGTGAGTTCTaGGTCCTCAGGGCCGAGACT +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSMTCEF*VLRAET
Trigger: AGTCTCGGCCCTGAGGACTCAGAACTCACAAGTCAT...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTGGGGGCGGTTCCCTCTaGCTGGAGACAGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSGGGSL*LETGQN
Trigger: ATTCTGTCCTGTCTCCAGTCAGAGGGAACCGCCCCC...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCACACGGCTGATGGCTaGGGTCAGCGGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGHTADG*GQRSLP
Trigger: GGGAAGAGACCGCTGACCTCAGCCATCAGCCGTGTG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCCCACACCACCCTTCTaGTGGAGAGCTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLPTPPF*WRALHM
Trigger: CATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGTTGAGTGTAAACGCTaGGTCATGCTCGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLVECKR*VMLAAQ
Trigger: CTGGGCAGCGAGCATGACTCAGCGTTTACACTCAAC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTAGCCCCTCCGGCGGGTaGACGCAGACATTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGSPSGG*TQTLFL
Trigger: CAAGAACAATGTCTGCGTGCACCCGCCGGAGGGGCT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTGTGCAGTATTTCCACTaGTGGAACACGTCAGACAGC +
Preference number: 4 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSVQYFH*WNTSDS
Trigger: GCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCAC...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKRRMEN*MHVLSG
Trigger: CCCCGATAAGACATGCATGCAGTTCTCCATCCGCCG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTTACTCCTTTCGCTTCTaGAGCCGCAGCGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFYSFRF*SRSASR
Trigger: GCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTA...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPARQNAL*SSGVME
Trigger: CTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATGGCAGAAGAGCATCTaGAGGCCGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAWQKSI*RPSSPS
Trigger: GCTGGGCGAGGACGGCCTGCAGATGCTCTTCTGCCA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTACAGATCGTGCAGGCTaGAGGGGATCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLATDRAG*RGSGAG
Trigger: TCCTGCCCCGGATCCCCTGCAGCCTGCACGATCTGT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAAGCCGAAGCCGTCCTaGGGCGTCTTTGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRKPKPS*GVFGPF
Trigger: GAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGGGGCCCGACCTATCTaGGGAAGCCGAAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMGARPI*GSRSRP
Trigger: AGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGGGCCCGACCTATCTaGGGAAGCCGAAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGARPI*GSRSRP
Trigger: AGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTSLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCCTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVLCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGCACGCACGTGTGCATaGATGCATGCACGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGARTCA*MHARRD
Trigger: GTCCCTGCGTGCATGCATGCATGCACACGTGCGTGC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGCACGCACGTGTGCATaGATGCATGCACGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPARTCA*MHARRD
Trigger: GTCCCTGCGTGCATGCATGCATGCACACGTGCGTGC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGGCCTGCAGGAGGGATaGAAGAGACCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGGLQEG*KRPQSR
Trigger: CCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGTGAGGTGCGAGCAGTaGACGGTGGGGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRVRCEQ*TVGVAL
Trigger: AAGTGCCACCCCCACCGTGCACTGCTCGCACCTCAC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGATGGGGAGCGTGAGGTaGGAGCAGTGCACGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVMGSVR*EQCTVG
Trigger: CCCCACCGTGCACTGCTCGCACCTCACGCTCCCCAT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGGCTGGTCCGAGAGGTaGAGACCTCACTGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRGWSER*RPHWGP
Trigger: CGGACCCCAGTGAGGTCTGCACCTCTCGGACCAGCC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCGGCTGCTCATGGAGCTaGCCTCCCACCTTCAGACCC +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCGCSWS*PPTFRP
Trigger: GGGTCTGAAGGTGGGAGGGCAGCTCCATGAGCAGCC...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGGAGACAGGACAGAATaGTTTCACACCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALGDRTE*FHTQER
Trigger: CCGTTCCTGGGTGTGAAAGCATTCTGTCCTGTCTCC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCCCCCTTCCACAGCACTaGCTCTCACCCTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPPLPQH*LSPFSR
Trigger: TCGGGAGAAGGGTGAGAGGCAGTGCTGTGGAAGGGG...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACCGAGGGGTAGGACCTaGAGGGCCCACACCACCCTT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTPRGRT*RAHTTL
Trigger: AAGGGTGGTGTGGGCCCTGCAGGTCCTACCCCTCGG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCCTGGCAGCCCAGCCTaGAGGCCTAGTGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGPGSPA*RPSAVQ
Trigger: TTGGACAGCACTAGGCCTGCAGGCTGGGCTGCCAGG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGCTGGGGGAAGCCCACTaGTCCTCCTGGGGCCTAGTC +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVLGEAH*SSWGLV
Trigger: GACTAGGCCCCAGGAGGAGCAGTGGGCTTCCCCCAG...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGGCCACCACGGCTGTTaGAGAGTCCACGGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPGHHGC*RVHGKS
Trigger: GCTCTTACCGTGGACTCTGCAACAGCCGTGGTGGCC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCTCCTTCCTGAGGAGCTaGCCTGCCCAGTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCSFLRS*PAQSRC
Trigger: GCAACGGGACTGGGCAGGGCAGCTCCTCAGGAAGGA...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAGGAGCAGAGAGCCCTaGATCTTGCCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRRSREP*ILPGAP
Trigger: AGGGGCCCCAGGCAAGATGCAGGGCTCTCTGCTCCT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTRRTAA*GGGWRT
Trigger: AGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCCCCAGCTCATTCAGGTaGTTGAGCCAGGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPPSSFR*LSQAET
Trigger: CGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGG...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCTCCTCGGGAGTCATaGAGAGCCTTTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKAPRES*RAFSAG
Trigger: TCCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCGTCATCCCCGTAGATaGCCACGATGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGRHPRR*PRWPRR
Trigger: TCTGCGTGGCCATCGTGGCCATCTACGGGGATGACG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTAAGTGCAGGAGCATCTaGTCCGTGGCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPKCRSI*SVASCC
Trigger: GCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGCCCCGTTCATGTGCATaGCCAGGTTTCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKPRSCA*PGFRSA
Trigger: TGCACTTCGGAAACCTGGCCATGCACATGAACGGGG...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDARELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGGCTGCCCTCGAGGGTaGAGCAAATCCTGGGACATG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPGCPRG*SKSWDM
Trigger: CATGTCCCAGGATTTGCTCCACCCTCGAGGGCAGCC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCAGCCCTCGACGCAGTaGGTGAGTGAGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAQPSTQ*VSEAFL
Trigger: GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSLQRCP*AWTGPR
Trigger: GCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAA...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGGTCCTGAAGGGAAGTaGAAGAGTCTAACTATTTCC +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLGPEGK*KSLTIS
Trigger: GGAAATAGTTAGACTCTTCCACTTCCCTTCAGGACC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCCTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALLGSTC*TTWVHG
Trigger: TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAG...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGGGCAATGGATATAACTaGTTTCTAGCGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGGNGYN*FLAEGQ
Trigger: CTGACCCTCCGCTAGAAACCAGTTATATCCATTGCC...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGGAGAGCTGCAGGTGTaGTGTCCACCAAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGGELQV*CPPRLG
Trigger: TCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGGTGGGGGTGGCACTTaGTGCAGAGATGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGGGGGT*CRDAAD
Trigger: ATCAGCTGCATCTCTGCACCAAGTGCCACCCCCACC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCGACCACGTTGCCTCTTaGGTGCCAGCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPADHVAS*VPARPH
Trigger: ATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTC...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGCCTGGCACTTCGGCTaGTCAGGAACAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGAWHFG*SGTVAA
Trigger: AGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACCACACTGGGCTGCTATaGAAAACTGAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDHTGLL*KTERSE
Trigger: CTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTG...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACATTAGCTTTCTAGTTTaGGGGCGGTTCCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDISFLV*GRFPLT
Trigger: AGTCAGAGGGAACCGCCCCCAAACTAGAAAGCTAAT...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGGCAGGTGTGGTCCCTaGGACTTCATAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGGRCGP*DFINHP
Trigger: AGGATGGTTTATGAAGTCCCAGGGACCACACCTGCC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGACCTGAGTGGCAGGTGTaGTCCCTGGGACTTCATAAA +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGPEWQV*SLGLHK
Trigger: TTTATGAAGTCCCAGGGACCACACCTGCCACTCAGG...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGGACACACAGCTGGGTaGGCGTGTGGGAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHGHTAG*ACGSAG
Trigger: ACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTCGGAGGACACACAGCTaGGTGGGCGTGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSRRTHS*VGVWEC
Trigger: GCACTCCCACACGCCCACCCAGCTGTGTGTCCTCCG...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATGAGGTGGGGTTGTGGTaGGCCTTGTCCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHEVGLW*ALSPCR
Trigger: CCTGCAGGGGGACAAGGCCCACCACAACCCCACCTC...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCAGCTTCTGCGTCATTaGGAGCTGGCTGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGQLLRH*ELAAAP
Trigger: GGGCGCAGCAGCCAGCTCCCAATGACGCAGAAGCTG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp TGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTaGCTGTCTCTCCCTCCGTGCCTTTGGCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: CRCGVHQGLERH*LSLPPCLWLCH
Trigger: ATGGCACAGCCAAAGGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CGTGCTCGCCTGAGTCTCTGGAGTAAGAGTCACGCCTaGGAGAAGGAGGGCAGCCAAAGGCCACGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: RARLSLWSKSHA*EKEGSQRPRRN
Trigger: ATTTCTGCGTGGCCTTTGGCTGCCCTCCTTCTCCAAGGCGTGACTCTTACTCCAGAGACTCAGGCGAGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAACGCTGCCACCGGGGGTaGGGGTCAGGAGGTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVERCHRG*GSGGPR
Trigger: CCTCGGACCTCCTGACCCTCACCCCCGGTGGCAGCG...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGCACCAGAAGGTGTCTaGCTCATCCAGGACCTCGGC +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRAPEGV*LIQDLG
Trigger: GCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTGTCCTCGTCCCGGGGTaGGCTGACGAAGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFVLVPG*ADEDRV
Trigger: AACACGATCTTCGTCAGCTCACCCCGGGACGAGGAC...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCCAGCTGCTGCTCGATaGCGTCATCCCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAPAAAR*RHPRRW
Trigger: CCATCTACGGGGATGACGTCATCGAGCAGCAGCTGG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLNPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCTCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALSRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTGTGCAGAGATGCAGCTaGTTGGTCCGGGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSVQRCS*LVRVRS
Trigger: AGACCTGACCCGGACCAATCAGCTGCATCTCTGCAC...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGGACGAAGTGGATCCTaGGGCTCATTCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVGRSGS*GSFPGD
Trigger: GTCCCCAGGGAATGAGCCTCAGGATCCACTTCGTCC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCACGATGCACACGGCTaGTGGCTGAGGTCAGCGGTC +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMHDAHG*WLRSAV
Trigger: GACCGCTGACCTCAGCCATCAGCCGTGTGCATCGTG...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGAGAGCTCTCCGTCCTaGGCTCGCTGCCCCTCACGA +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIESSPS*ARCPSR
Trigger: TCGTGAGGGGCAGCGAGCTCAGGACGGAGAGCTCTC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGGAGTGCAGGTGTGCTaGCTCCGAACCAAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEGVQVC*LRTKGE
Trigger: CTCTCCCTTGGTTCGGAGTCAGCACACCTGCACTCC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCGTGGCTTTGCTCATTTaGGGGTGTGCAGGGTACATA +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSVALLI*GCAGYI
Trigger: TATGTACCCTGCACACCCTCAAATGAGCAAAGCCAC...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCGGTGACATCCTaGGGACTGACCGTCGACAAG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPSSVTS*GLTVDK
Trigger: CTTGTCGACGGTCAGTCCGCAGGATGTCACCGAGGA...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGAACACGCCGCAAATCTaGTCCAGGGCGCACACCCGC +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMNTPQI*SRAHTR
Trigger: GCGGGTGTGCGCCCTGGAGCAGATTTGCGGCGTGTT...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCGAGCCTCTTGTACATaGTCTCCTCGGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGRASCT*SPRGAS
Trigger: AGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGATACTCCTTTCGCTTCTaGAGCCGCAGCGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRYSFRF*SRSASR
Trigger: GCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTA...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTATGGAGAGCCTTTTCTaGTGGATCTCAGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: RSSTLHVHVQQAEPGGKPMESLF*WISEYS
Trigger: GGAGTACTCTGAGATCCAGCAGAAAAGGCTCTCCAT...AGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFRQNAL*SSGVME
Trigger: CTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGCGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAG +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQERQNAL*SSGVME
Trigger: CTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCG...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCGTTAATGCAGATCGTTGGCAGAAGAGCATCTaGAGGCCGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NEASQTVHAVLPFVNADRWQKSI*RPSSPS
Trigger: GCTGGGCGAGGACGGCCTGCAGATGCTCTTCTGCCA...ACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCCGTGGCCAGCTGCTaGTCGATGACGTCATCCCCG +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVSVASC*SMTSSP
Trigger: CGGGGATGACGTCATCGAGCAGCAGCTGGCCACGGA...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAAAGGCATCTCCACCGTaGCCCCGTAGGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAKASPP*PRRDSS
Trigger: AGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTT...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCCTCCTCAAGCCTGACTaGTCTTCCGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGLLKPD*SSASLS
Trigger: GGATAGAGAGGCGGAAGAGCAGTCAGGCTTGAGGAG...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLELGST*WTTWVH
Trigger: ATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGCCAGGTCCGACCTCTaGACCATGAGCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSARSDL*TMSIPW
Trigger: CCAGGGGATGCTCATGGTGCAGAGGTCGGACCTGGC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGGCCTGCAGGAGGGATaGAAGAGACCACAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGGLQEG*KRPQSR
Trigger: CCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGCTTGGAAAGGCACTTaGTGTCTCTCCCTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPAWKGT*CLSLRA
Trigger: GGCACGGAGGGAGAGACAGCAAGTGCCTTTCCAAGC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGTGAGGTGCGAGCAGTaGACGGTGGGGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTVRCEQ*TVGVAL
Trigger: AAGTGCCACCCCCACCGTGCACTGCTCGCACCTCAC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCGTCAGGAACAGTGGCTaGTCATGGAGCTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCVRNSG*SWSCPP
Trigger: GGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGAC...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGTCAGGAACAGTGGCTaGTCATGGAGCTGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEVRNSG*SWSCPP
Trigger: GGGAGGGCAGCTCCATGAGCAGCCACTGTTCCTGAC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCATGGAAACCTCCCCCTaGCTGGCACTTCGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCMETSP*LALRLV
Trigger: GACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCAT...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGATGGAAACCTCCCCCTaGCTGGCACTTCGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEMETSP*LALRLV
Trigger: GACCAGCCGAAGTGCCAGGCAGGGGGAGGTTTCCAT...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTGAGCTGGGCAACCTCTaGCAGCCACTACCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAELGNL*QPLPLS
Trigger: GCTAAGGGGTAGTGGCTGGCAGAGGTTGCCCAGCTC...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGTGGGCGTGTGGGAGTaGAGGTGTGCTGACTCCGAA +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGVGVWE*RCADSE
Trigger: TTCGGAGTCAGCACACCTGCACTCCCACACGCCCAC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAGCGAGGCTCCCAGTTaGTCAGAGTTAACCGGCCCT +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGSEAPS*SELTGP
Trigger: AGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCTGAGTCATGCTCGCTaGCCAGCTGTGTGGCAAGGG +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCLSHAR*PAVWQG
Trigger: CCCTTGCCACACAGCTGGGCAGCGAGCATGACTCAG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGGGTACATATGTGTCTaGCCCGGGAATCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKGYICV*PGNPSS
Trigger: GCTACTTGGATTCCCGGGGCAGACACATATGTACCC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTAAATCGGTTTCCCTCTaGGGCTCTCTCCTCCCCGGC +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFKSVSL*GSLLPG
Trigger: GCCGGGGAGGAGAGAGCCGCAGAGGGAAACCGATTT...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAAGACCGTCCATGCCGTaGTTCCCTTCGTTAATGCAG +
Preference number: 4 (lower is better)
Translates to: PCFPSLMQIVHPARPRPARPSMP*FPSLMQ
Trigger: CTGCATTAACGAAGGGAAGCACGGCATGGACGGTCT...TGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCGGTCTGGAACACTCTaGGCCACCACCAGGATGTCC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDRSGTL*ATTRMS
Trigger: GGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCTTGTCCAGGCCGCCGTaGTGGAAGTGGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQALSRPP*WKWKTL
Trigger: CAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAA...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATCCCAGCTCATTCAGGTaGTTGAGCCAGGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHPSSFR*LSQAET
Trigger: CGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGG...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCGTTAATGCAGATCGTCCCCAGCTCATTCAGGTaGTTGAGCCAGGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: MKPLRPSMPCFPSLMQIVPSSFR*LSQAET
Trigger: CGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGG...GACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTCCCGCTCCTCCGACGTaGACTCGTGGCTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVPAPPT*TRGCNS
Trigger: GCTATTACAGCCACGAGTCCACGTCGGAGGAGCGGG...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCCCGCTCCTCCGACGTaGACTCGTGGCTGTAATAGC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDPAPPT*TRGCNS
Trigger: GCTATTACAGCCACGAGTCCACGTCGGAGGAGCGGG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGGGTGGAGCAAATCCTaGGACATGTTGAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLGWSKS*DMLKSS
Trigger: GGAGGATTTCAACATGTCCCAGGATTTGCTCCACCC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCCATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGHPSCG*GRFGKC
Trigger: ACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATG...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGTTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: LRDNREPGLPEARPLKSVFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGAGAGCCCTGAGTGCTaGCTCCTTCACTGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDESPEC*LLHCGR
Trigger: GCGACCACAGTGAAGGAGCCAGCACTCAGGGCTCTC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCAACACTGCTTTGAAGTaGCATGGCCCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVNTALK*HGPAVP
Trigger: GGGCACTGCTGGGCCATGCCACTTCAAAGCAGTGTT...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGACGACCTGGGTTCATaGAGAAAAGAGAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALDDLGS*RKEKPR
Trigger: TCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGACAGACCTGGGAACTTaGAAGTACCTGCTGGACGAC +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKTDLGT*KYLLDD
Trigger: GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGT...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCGGAGAGCTGCAGGTGTaGTGTCCACCAAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAGELQV*CPPRLG
Trigger: TCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCC...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGERTIK*QACPPP
Trigger: GGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAGTGCACGGTGGGGGTaGCACTTGGTGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRSARWG*HLVQRC
Trigger: GCATCTCTGCACCAAGTGCCACCCCCACCGTGCACT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTTCCGAGGTCCTGGCTaGTCCGAGAGGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAFRGPG*SERCRP
Trigger: AGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAA...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAATGGCTTCCGAGGTCCTaGCTGGTCCGAGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQWLPRS*LVREVQ
Trigger: CTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCA...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACATGGCTTCCGAGGTCCTaGCTGGTCCGAGAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTWLPRS*LVREVQ
Trigger: CTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCA...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGACCACGTTGCCTCTTaGGTGCCAGCACGCCCACAT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRDHVAS*VPARPH
Trigger: ATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGTC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGGACCTTCCAGGGCTaGCAAGCATCGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGTFQG*QASSLT
Trigger: GGTCAGGCTCGATGCTTGCCAGCCCTGGAAGGTCCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCCAAGGGCATGCCTCTaGCTTCATGAACCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSPRACL*LHEPSG
Trigger: CCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGACACACAGCTGGGTaGGCGTGTGGGAGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGHTAG*ACGSAG
Trigger: ACCTGCACTCCCACACGCCCACCCAGCTGTGTGTCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTCAAGGCCTCCCAAAGTaGGCGCTTGCTGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSQGLPK*ALAEPL
Trigger: CAGGGGCTCAGCAAGCGCCCACTTTGGGAGGCCTTG...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGAGGAGACCTGCTCCATaGGCCAAACCGCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRRRPAP*AKPPLP
Trigger: GGGCAAAGGCGGTTTGGCCCATGGAGCAGGTCTCCT...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCACCAAGGCCAGGTAGGTaGCAGGTGAGACAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAPRPGR*QVRQAL
Trigger: AAGGGCCTGTCTCACCTGCCACCTACCTGGCCTTGG...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCAGCCTGAGGCCCTaGACCCCTTTTGCACCATCC +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMPSLRP*TPFAPS
Trigger: GGATGGTGCAAAAGGGGTCCAGGGCCTCAGGCTGGG...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTaGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAG +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDV*GSVFGSLRENE
Trigger: CTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp TCTGGGCTGTATCCAGGGAACCAGCTGCCGGACAAATaGGAAGGGACCTTCTTGGCAGGACAGGTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: SGLYPGNQLPDK*EGTFLAGQVQL
Trigger: CAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTGGTTCCCTGGATACAGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGACGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRRPGVS*RRSCSA
Trigger: TGCAGAACACGATCTTCGTCAGCTCACCCCGGGACG...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGTCCTCGTCCCGGGGTaGGCTGACGAAGATCGTGTT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTVLVPG*ADEDRV
Trigger: AACACGATCTTCGTCAGCTCACCCCGGGACGAGGAC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAACCAGCTGCTGCTCGATaGCGTCATCCCCGTAGATGG +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQPAAAR*RHPRRW
Trigger: CCATCTACGGGGATGACGTCATCGAGCAGCAGCTGG...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGCTGTCCCACATGCCTaGCCCGCACAGCTTACACAG +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSAVPHA*PAQLTQ
Trigger: CTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGCTGTCCCACATGCCTaGCCCGCACAGCTTACACAG +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRAVPHA*PAQLTQ
Trigger: CTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGCAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCCAGGGAGAAAAGCTTTaGGTGGGAAGAAGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAQGEKL*VGRSLL
Trigger: TAGAAGGCTTCTTCCCACTCAAAGCTTTTCTCCCTG...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGTGCAGAGATGCAGCTaGTTGGTCCGGGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGVQRCS*LVRVRS
Trigger: AGACCTGACCCGGACCAATCAGCTGCATCTCTGCAC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTATGGCCGTGCAGGGCTaGTTATCCCCTATTTGCACG +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGMAVQG*LSPICT
Trigger: CGTGCAAATAGGGGATAATCAGCCCTGCACGGCCAT...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTAATAAGCAGCATTGCTaGGGATGGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPNKQHC*GWPCRA
Trigger: AGCCCTGCACGGCCATCCTCAGCAATGCTGCTTATT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGGCAAGCATCGAGCCTaGCCACGTTGCCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSGKHRA*PRCLLG
Trigger: ACCCAAGAGGCAACGTGGTCAGGCTCGATGCTTGCC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCCTTGGTAGGGCAGCCTaGATTTTCCCTAACTCCCAC +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQALGRAA*IFPNSH
Trigger: GTGGGAGTTAGGGAAAATTCAGGCTGCCCTACCAAG...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGATTGTTGAGGGGGTTTTaGAGCAGCTTCTGCGTCATT +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGLLRGF*SSFCVI
Trigger: AATGACGCAGAAGCTGCTTCAAAACCCCCTCAACAA...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTCTGCAGGAGGCCGTTaGTGTCCGGGAACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPSAGGR*CPGTAG
Trigger: GCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACATGGTCCGTGGCCAGCTaGTGCTCGATGACGTCATCC +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTWSVAS*CSMTSS
Trigger: GGATGACGTCATCGAGCAGCAGCTGGCCACGGACCA...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAGCTCCCCGTTCATGTaGATGGCCAGGTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGSSPFM*MARFPK
Trigger: CTTCGGAAACCTGGCCATGCACATGAACGGGGAGCT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAAAGGCATCTCCACCGTaGCCCCGTAGGGACAGCTCT +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRKASPP*PRRDSS
Trigger: AGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTT...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGGCTGCGCGTTCCACTaGAGCGTTTCAGGAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSGCAFH*SVSGAD
Trigger: GTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAAGCCTGCGTCTCAGGTaGGGTGGCTGCGCGTTCCAC +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTESLRLR*GGCAFH
Trigger: GTGGAACGCGCAGCCACCGCACCTGAGACGCAGGCT...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGACCCCGCTGTGTTCTaGAGCCCTCGACGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPDPAVF*SPRRSG
Trigger: CCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVQTADS*PRSVLT
Trigger: AGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTG...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGTGCCATGGCTGGCCTaGAGGAGGGATGCAAGAGAC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQVPWLA*RRDARD
Trigger: GTCTCTTGCATCCCTCCTGCAGGCCAGCCATGGCAC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCTTGTCCTGATGCCCTaGCCACCCCCGCCGAGCTTC +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFLVLMP*PPPPSF
Trigger: GAAGCTCGGCGGGGGTGGGCAGGGCATCAGGACAAG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGCCTGCAGGGGCCCCTaGAGAGCATACAGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPACRGP*RAYREV
Trigger: CACCTCCCTGTATGCTCTGCAGGGGCCCCTGCAGGC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCTCCACTGACTTAGGCTaGACCCCTGCACATATGTGT +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLSTDLG*TPAHMC
Trigger: ACACATATGTGCAGGGGTGCAGCCTAAGTCAGTGGA...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACTTGCACCCCTGGCTCTaGCCAGGGACACCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHLHPWL*PGTPLS
Trigger: GGAGAGGGGTGTCCCTGGGCAGAGCCAGGGGTGCAA...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCAAAAGGCCAGATGGCTaGAGGCTGTTTGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPKRPDG*RLFAPL
Trigger: CAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTT...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTAAAAGGCCAGATGGCTaGAGGCTGTTTGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSKRPDG*RLFAPL
Trigger: CAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTT...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTCCCCTGACCCCTGCTaGACGGTTCCAAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGISPDPC*TVPRAW
Trigger: CCAAGCCCTTGGAACCGTGCAGCAGGGGTCAGGGGA...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCGTCTAAATTaGATGGCACACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKALRLN*MAHTPG
Trigger: TCCTGGGGTGTGTGCCATGCAATTTAGACGAAGTGC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGATTGGCCCTTGCCCATTaGCATACTCTACTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGLALAH*HTLLSD
Trigger: ATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAA...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATCTTCTCCTCATCCTCTaGCGCAGGGCTGGCGAGCAT +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHLLLIL*RRAGEH
Trigger: ATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAG...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTAGAAGGAGCCAGCGGTaGCAGAAGAGCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVRRSQR*QKSICR
Trigger: CCTGCAGATGCTCTTCTGCCACCGCTGGCTCCTTCT...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGCAGGAGGCGGAACTaGTACAGCAAACTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGRRRN*YSKLLA
Trigger: GGCGAGGAGTTTGCTGTACCAGTTCCGCCTCCTGCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALFGKCV*LTPRER
Trigger: TCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAA...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGGGTCCTGAAGGGAAGTaGAAGAGTCTAACTATTTCC +
Preference number: 4 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWGPEGK*KSLTIS
Trigger: GGAAATAGTTAGACTCTTCCACTTCCCTTCAGGACC...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGACTGGCTCCTTCACTGTaGTCGCTCTCACGTCCGACC +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRLAPSL*SLSRPT
Trigger: GGTCGGACGTGAGAGCGACCACAGTGAAGGAGCCAG...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGAGAGCCCTGAGTGCTaGCTCCTTCACTGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSESPEC*LLHCGR
Trigger: GCGACCACAGTGAAGGAGCCAGCACTCAGGGCTCTC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGAGAGCCCTGAGTGCTaGCTCCTTCACTGTGGTCGC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQESPEC*LLHCGR
Trigger: GCGACCACAGTGAAGGAGCCAGCACTCAGGGCTCTC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTTCGACACTTCTAAGCTaGCTGGGAGTTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: WPRGELQVWCPPRLGKALSTLLS*LGVLTA
Trigger: TGCTGTGAGAACTCCCAGCCAGCTTAGAAGTGTCGA...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCATTTCAGGAGGGATTTaGTCTCCTCGCTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSISGGI*SPRSRS
Trigger: ACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAAT...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTGCTTTGAAGTGGCATaGCCCAGCAGTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVCFEVA*PSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIRYPRI*ALMGLQ
Trigger: CTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCACTGCTAGACAGCAATaGTCGGTACCCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVTARQQ*SVPQDL
Trigger: CAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGT...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCGGCAATGGATATAACTaGTTTCTAGCGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALGNGYN*FLAEGQ
Trigger: CTGACCCTCCGCTAGAAACCAGTTATATCCATTGCC...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGAGCGGACAATAAAGTaGCAGGCCTGTCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQERTIK*QACPPP
Trigger: GGGTGGGGGACAGGCCTGCCACTTTATTGTCCGCTC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTGGTGGGGGTGGCACTTaGTGCAGAGATGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAGGGGT*CRDAAD
Trigger: ATCAGCTGCATCTCTGCACCAAGTGCCACCCCCACC...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGGTGGGGGTGGCACTTaGTGCAGAGATGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGGGGGT*CRDAAD
Trigger: ATCAGCTGCATCTCTGCACCAAGTGCCACCCCCACC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCGAGCAGTGCACGGTaGGGGTGGCACTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFASSAR*GWHLVQ
Trigger: CTGCACCAAGTGCCACCCCCACCGTGCACTGCTCGC...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTTTCCGAGGTCCTGGCTaGTCCGAGAGGTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSFRGPG*SERCRP
Trigger: AGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAA...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCGCGGGGTTTTTGGCTaGTTTCCTCTAATTGCATCC +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLRGVFG*FPLIAS
Trigger: GGATGCAATTAGAGGAAACCAGCCAAAAACCCCGCG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCCCGCAGGGGTGGGCTaGGGCCCTCCCTCCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANPAGVG*GPPSLC
Trigger: ACAGAGGGAGGGAGGGCCCCAGCCCACCCCTGCGGG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGCCTGGCACTTCGGCTaGTCAGGAACAGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTAWHFG*SGTVAA
Trigger: AGCAGCCACTGTTCCTGACCAGCCGAAGTGCCAGGC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGAAACCTCCCCCTGCCTaGCACTTCGGCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVKPPPA*HFGWSG
Trigger: TCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATAGGTCCTCTCCCTCCTaGACATGGAAACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHRSSPS*TWKPPP
Trigger: AGGGGGAGGTTTCCATGTCCAGGAGGGAGAGGACCT...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATGGCCTCCAAAAGAGCTaGGCAACCTCTGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHGLQKS*ATSASH
Trigger: GTGGCTGGCAGAGGTTGCCCAGCTCTTTTGGAGGCC...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGACACCTCTATTCCCTGTaGCCTCCAAAAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGHLYSL*PPKELG
Trigger: GCCCAGCTCTTTTGGAGGCCACAGGGAATAGAGGTG...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATGCACTCCCAGGAGGTaGCCTGGGCAGGCAGGCATC +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTECTPRR*PGQAGI
Trigger: GATGCCTGCCTGCCCAGGCCACCTCCTGGGAGTGCA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTTCACACACACATGCCTaGCGGGATCGCAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFSHTHA*RDRRGW
Trigger: CCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGA...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATGGGAGGGGCACCCCTaGGCATGTGGAGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTEWEGHP*ACGEEV
Trigger: CACCTCCTCTCCACATGCCCAGGGGTGCCCCTCCCA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGACAGGTCCAGTTGGTaGCCTGAGGTGGGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVDRSSW*PEVGLW
Trigger: CCACAACCCCACCTCAGGCCACCAACTGGACCTGTC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCAGGGGCCAGTGGGGTaGCTTTGCTCATTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRQGPVG*LCSFEG
Trigger: ACCCTCAAATGAGCAAAGCCACCCCACTGGCCCCTG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCTATTGTGCTTGTTCATaGCCAGGAATCAACGAACTT +
Preference number: 4 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLYCACS*PGINEL
Trigger: AAGTTCGTTGATTCCTGGCCATGAACAAGCACAATA...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCATCTCAGGACTTCTTaGCCCTTGCCCATTGCCATA +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEHLRTS*PLPIAI
Trigger: TATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp TCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQLWLGTFWEVC*AHSERTRSQEE
Trigger: TTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAGTGGCTTTCTGTGCAA +
Preference number: 4 (lower is better)
Translates to: PQKDAMEDFRRD*VSSLKEWLSVQ
Trigger: TTGCACAGAAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CCTATGTTCTCTTGCCCGGCGTGGGTGACTACACAGTaGTCATTTACGGGGGAAGTAGGGCACAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PMFSCPAWVTTQ*SFTGEVGHSRG
Trigger: ACCTCTGCTGTGCCCTACTTCCCCCGTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp GAAAAGTGTGGCCCGCCAGGTGGCACCTATGTTCTCTaGCCCGGCGTGGGTGACTACACAGTTGTCATTTAC +
Preference number: 4 (lower is better)
Translates to: EKCGPPGGTYVL*PGVGDYTVVIY
Trigger: GTAAATGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCCACCTGGCGGGCCACACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATCGACCTGCTGGTCTTTaGGCTGCATCTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHRPAGL*AASRCS
Trigger: ACTGCACCGAGATGCAGCTCAAAGACCAGCAGGTCG...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGACCTCCCCGCGGATTaGCACATCAATACCGCCAAA +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEDLPAD*HINTAK
Trigger: TTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR TCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGCTGTCCCACATGCCTaGCCCGCACAGCTTACACAG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIAVPHA*PAQLTQ
Trigger: CTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGACGCAGTGGGTGAGTaGGGCCTTCCTCTCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIDAVGE*GLPLLS
Trigger: AGACAGGAGAGGAAGGCCTCACTCACCCACTGCGTC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCCTATCCTGGTCCCCATaGTGGTTCTCAGCACATCAA +
Preference number: 4 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVLSWSP*WFSAHQ
Trigger: TTGATGTGCTGAGAACCATCATGGGGACCAGGATAG...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGTGCAGAGATGCAGCTaGTTGGTCCGGGTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQVQRCS*LVRVRS
Trigger: AGACCTGACCCGGACCAATCAGCTGCATCTCTGCAC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTCTTCCCAGAGGCCCTaGGCAACATCGGGCGACGCT +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPSSQRP*ATSGDA
Trigger: AGCGTCGCCCGATGTTGCTCAGGGCCTCTGGGAAGA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCAGTCCTGGCTCCACTaGCTTAGGCTGCACCCCTGC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNQSWLH*LRLHPC
Trigger: GCAGGGGTGCAGCCTAAGTCAGTGGAGCCAGGACTG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCCCACACCACCCTTCTaGTGGAGAGCTTTGCACATG +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCPTPPF*WRALHM
Trigger: CATGTGCAAAGCTCTCCATCAGAAGGGTGGTGTGGG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCTTGCCCGGCGTGGGTaGCTACACAGTTGTCATTTA +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGLARRG*LHSCHL
Trigger: TAAATGACAACTGTGTAGTCACCCACGCCGGGCAAG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCTTCTCTGGGTGGATGTaGGGGAGGGTGATTGAACTG +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAFSGWM*GRVIEL
Trigger: CAGTTCAATCACCCTCCCTCACATCCACCCAGAGAA...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGACAAAGGAGCTGTCTCTaGTCACGCCCTCGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRQRSCL*SRPRLT
Trigger: TGTCAGCCGAGGGCGTGAGCAGAGACAGCTCCTTTG...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGTTGTCCACAGTGAACTaGACATTACGCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSELSTVN*TLRQNA
Trigger: AGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAA...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TCTCAGACCGTCCATGCCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCGCAGGATCCTCCTCATaGTCTCCACATTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SQTVHAVLPFVNADRPPCAGSSS*SPHWDC
Trigger: ACAATCCCAATGTGGAGAGCATGAGGAGGATCCTGC...GCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCACGAAGATCGTGTTCTaGATCAAACCCACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSTKIVF*IKPTKH
Trigger: GTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGT...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGCCAGGTTTCCGAAGTaGAGGAGCATCTGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTARFPK*RSIWSV
Trigger: CACGGACCAGATGCTCCTGCACTTCGGAAACCTGGC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAAGCTCCCCGTTCATGTaGATGGCCAGGTTTCCGAAG +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLASSPFM*MARFPK
Trigger: CTTCGGAAACCTGGCCATGCACATGAACGGGGAGCT...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTCTTTGGGCCCTTCTTaGCTTCCCTCAGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLASLGPS*LPSGTW
Trigger: CCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGA...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: LIPEPASSSCPDALPTPAFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGAAAAAGGCATCAGATaGTTCTCCAACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEEKGIR*FSNSLR
Trigger: CCTCAGGCTGTTGGAGAAGCATCTGATGCCTTTTTC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGAAAAAGGCATCAGATaGTTCTCCAACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKEKGIR*FSNSLR
Trigger: CCTCAGGCTGTTGGAGAAGCATCTGATGCCTTTTTC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCCTGCTGAGGAACACTaGTTTGAAGTGGCATGGCCC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDPAEEH*FEVAWP
Trigger: GGGCCATGCCACTTCAAAGCAGTGTTCCTCAGCAGG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTGAGGTGCGAGCAGTaGACGGTGGGGGTGGCACTT +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHVRCEQ*TVGVAL
Trigger: AAGTGCCACCCCCACCGTGCACTGCTCGCACCTCAC...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGCTGGTTTCCTCTAATTaGATCCAGATTAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: QLMASEVLAGPRGADLTGLVSSN*IQIKGV
Trigger: AACTCCCTTAATCTGGATGCAATTAGAGGAAACCAG...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAACGTTGCCTCTTGGGTaGCAGCACGCCCACATCAAA +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLATLPLG*QHAHIK
Trigger: TTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGT...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCAACCCCCAAGGGCATaGCTCTGGCTTCATGAACCT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRQPPRA*LWLHEP
Trigger: AGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGTGGGCGTGTGGGAGTaGAGGTGTGCTGACTCCGAA +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIVGVWE*RCADSE
Trigger: TTCGGAGTCAGCACACCTGCACTCCCACACGCCCAC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGTAAACGCTGAGTCATaGTCGCTGCCCAGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEVNAES*SLPSCV
Trigger: CACACAGCTGGGCAGCGAGCATGACTCAGCGTTTAC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGGGCTGCAGACAGGATaGTCTCTCATAGAAGGACCC +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHGLQTG*SLIEGP
Trigger: GGGTCCTTCTATGAGAGAGCATCCTGTCTGCAGCCC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CCGTGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCATACCGCCAAAGAAAATaGCCTTCCGCAGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: PCFPSLMQIVHPARPRPAYRQRK*PSAACT
Trigger: AGTACAAGCTGCGGAAGGCCATTTTCTTTGGCGGTA...TGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp GTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGAGAGCCTTTTCTGCTaGATCTCAGAGTACTCCTTT +
Preference number: 4 (lower is better)
Translates to: VNADRPPCTSTSSRLSQEESLFC*ISEYSF
Trigger: AAAGGAGTACTCTGAGATCCAGCAGAAAAGGCTCTC...CTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CCA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGGAGAGCCTTTTCTGCTaGATCTCAGAGTACTCCTTT +
Preference number: 4 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLESLFC*ISEYSF
Trigger: AAAGGAGTACTCTGAGATCCAGCAGAAAAGGCTCTC...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCGTCATCCCCGTAGATaGCCACGATGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIRHPRR*PRWPRR
Trigger: TCTGCGTGGCCATCGTGGCCATCTACGGGGATGACG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGTTTGGGAAGTGTGTTTaGCTCACTCCGAGAGAACGA +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEFGKCV*LTPRER
Trigger: TCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAA...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGATGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTTCGGCATCCCAGCTGTaGCTGGGGACGTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSSASQL*LGTFWE
Trigger: TTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGA...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCCCTTTCCCGAGTGAGACCCCGCGAGCACTCGTCAATTCTCCCATCACCCTCCTGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCA +
Preference number: 4 (lower is better)
Translates to: ALSRVRPREHSSILPSPSCPCLG*SANTLP
Trigger: TGGTAGTGTATTAGCTGACCAACCAAGACAAGGACA...GGAGGGTGATGGGAGAATTGACGAGTGCTCGCGGGGTCTCACTCGGGAAAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGAGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCT +
Preference number: 4 (lower is better)
Translates to: SPSVPLAVPWLACRRDAREKSFE*EEAFYP
Trigger: AGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTC...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACATGCTTTGAAGTGGCATaGCCCAGCAGTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTCFEVA*PSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCA...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGAGAAGCCGAGAAGGTaGAGGAGGCCGGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMEKPRR*RRPVSG
Trigger: ACCACTTACCGGCCTCCTCCACCTTCTCGGCTTCTC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGAGAAGCCGAGAAGGTaGAGGAGGCCGGTAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVEKPRR*RRPVSG
Trigger: ACCACTTACCGGCCTCCTCCACCTTCTCGGCTTCTC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAACAGACCTGGGAACTTaGAAGTACCTGCTGGACGAC +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGTDLGT*KYLLDD
Trigger: GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAACGGTACCCCAGGATCTaGGCACTGATGGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTERYPRI*ALMGLQ
Trigger: CTGGAGCCCCATCAGTGCCCAGATCCTGGGGTACCG...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGVSTKA*KGTCCL
Trigger: GAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACAC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSVSTKA*KGTCCL
Trigger: GAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACAC...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTAGAGATGCAGCTGATTaGTCCGGGTCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLARDAAD*SGSGLG
Trigger: CCCAAGACCTGACCCGGACCAATCAGCTGCATCTCT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACAGATTAAGGGAGTTGTaGAGGGGCGGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDRLREL*RGGASP
Trigger: TGGAGAAGCCCCGCCCCTCCACAACTCCCTTAATCT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGAACAGTGGCTGCTCATaGAGCTGCCCTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVNSGCS*SCPPTF
Trigger: GAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAAACAGTGGCTGCTCATaGAGCTGCCCTCCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTNSGCS*SCPPTF
Trigger: GAAGGTGGGAGGGCAGCTCCATGAGCAGCCACTGTT...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCCCAGAGGGCACAGCTTaGGCAGATTCCCATCATCTA +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPPEGTA*ADSHHL
Trigger: TAGATGATGGGAATCTGCCCAAGCTGTGCCCTCTGG...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTCCTCTGAGGCAAAGTaGCCTGCAGGGGCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QESTNFGQTISRLWVWPWSSEAK*PAGAPA
Trigger: TGCAGGGGCCCCTGCAGGCCACTTTGCCTCAGAGGA...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAAACGGCCGTGCAGCCTaGCTTAGAAACAAGGGACGA +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLANGRAA*LRNKGR
Trigger: TCGTCCCTTGTTTCTAAGCCAGGCTGCACGGCCGTT...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGTGCTGGAGGAAAGATaGTTGCATGACTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKVLEER*LHDLTS
Trigger: AGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCAC...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGTGCTGGAGGAAAGATaGTTGCATGACTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEVLEER*LHDLTS
Trigger: AGAGGTCAAGTCATGCAACCATCTTTCCTCCAGCAC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAGCTGCCGGACAAATTaGAAGGGACCTTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGSCRTN*KGPSWQ
Trigger: CTGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCAGGCCACGCAGAAATTaGGGGTTCAAGGTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPRPRRN*GFKVCP
Trigger: TGGGCAAACCTTGAACCCCCAATTTCTGCGTGGCCT...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATGCTCACGCCCTCGGCTaGCAGTTCCAAAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNAHALG*QFQRAI
Trigger: GATGGCTCTTTGGAACTGTCAGCCGAGGGCGTGAGC...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACGATGGCCACGCAGATaGAAAGGTGGAAGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTRWPRR*KGGSSP
Trigger: CGGACTACTTCCACCTTTTCATCTGCGTGGCCATCG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCCAGGGAGAAAAGCTTTaGGTGGGAAGAAGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGQGEKL*VGRSLL
Trigger: TAGAAGGCTTCTTCCCACTCAAAGCTTTTCTCCCTG...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAACAGAAGCAACATGGATaGGAAGCCCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQQKQHG*EAHPIP
Trigger: GGGAATGGGGTGGGCTTCTCATCCATGTTGCTTCTG...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATATGGCCGTGCAGGGCTaGTTATCCCCTATTTGCACG +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHMAVQG*LSPICT
Trigger: CGTGCAAATAGGGGATAATCAGCCCTGCACGGCCAT...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATAATAAGCAGCATTGCTaGGGATGGCCGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHNKQHC*GWPCRA
Trigger: AGCCCTGCACGGCCATCCTCAGCAATGCTGCTTATT...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCCCCTCCCTCTGTACTTaGTCCATGACTTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPAPSLCT*SMTCEF
Trigger: GAACTCACAAGTCATGGATCAAGTACAGAGGGAGGG...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGGCTGCTATGGAAAACTaGAAGGTCAGAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGAAMEN*KVRGWR
Trigger: CCTCCACCCTCTGACCTTTCAGTTTTCCATAGCAGC...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGACCAGTCCTGGGCCTaGCCAATGGGTGATTACATT +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVDQSWA*PMGDYI
Trigger: AATGTAATCACCCATTGGTCAGGCCCAGGACTGGTC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTAGGAGGGGGCTGGCTTaGGACCTTCCTGTTCTATGT +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSRRGLA*DLPVLC
Trigger: ACATAGAACAGGAAGGTCTCAAGCCAGCCCCCTCCT...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAAGAGTTGGGGACCCATaGCAGGATGAGGGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTERVGDP*QDEGGS
Trigger: GGAGCCACCCTCATCCTGGCATGGGTCCCCAACTCT...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACGGATGGAGAACTGCATaGATGTCTTATCGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDGWRTA*MSYRGR
Trigger: TCGCCCCCGATAAGACATGCATGCAGTTCTCCATCC...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTGCAGGATCCTCCTCATaGTCTCCACATTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPAGSSS*SPHWDC
Trigger: ACAATCCCAATGTGGAGAGCATGAGGAGGATCCTGC...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TGCTTCCCTTCGTTAATGCAGATCGTCCACCCTGCACGTCCACGTCCAGCAGGCACGAAGATCGTGTTCTaGATCAAACCCACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: CFPSLMQIVHPARPRPAGTKIVF*IKPTKH
Trigger: GTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGT...GCCTGCTGGACGTGGACGTGCAGGGTGGACGATCTGCATTAACGAAGGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR GCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTTGGTCCGTGGCCAGCTaGTGCTCGATGACGTCATCC +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFWSVAS*CSMTSS
Trigger: GGATGACGTCATCGAGCAGCAGCTGGCCACGGACCA...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGCCAGGTTTCCGAAGTaGAGGAGCATCTGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIARFPK*RSIWSV
Trigger: CACGGACCAGATGCTCCTGCACTTCGGAAACCTGGC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGCACGTGTGCATGCATaGATGCACGCAGGGACACAC +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIARVHA*MHAGTH
Trigger: GTGTGTCCCTGCGTGCATGCATGCATGCACACGTGC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCATTGTCAGAGGATCTTaGAAACACAAACACGCACGC +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLIVRGS*KHKHAR
Trigger: GCGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAAT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: ILSLLPPDCAERTIKWQARSGFL*KWLDTS
Trigger: AGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCT...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCTGTCTCTCCCTCCGTaGCTTTGGCTGTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNLSLPP*LWLCHG
Trigger: GCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATGAGCTGGGCAACCTCTaGCAGCCACTACCCCTTAGC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNELGNL*QPLPLS
Trigger: GCTAAGGGGTAGTGGCTGGCAGAGGTTGCCCAGCTC...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCTCCACTGACTTAGGCTaGACCCCTGCACATATGTGT +
Preference number: 4 (lower is better)
Translates to: AELHHASTFKYAHTRTPASTDLG*TPAHMC
Trigger: ACACATATGTGCAGGGGTGCAGCCTAAGTCAGTGGA...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCCACGGGGCCCTGTTTaGCCAGCACAGAGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVPRGPV*PAQSLP
Trigger: CGGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCTCCTCGTGGGATGAATaGATGAATGATGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLSSWDE*MNDVEG
Trigger: TCCTTCCACATCATTCATGCATTCATCCCACGAGGA...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACAGTGCGCTCCTGCCTTaGTTCCCTAGAGCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHSALLP*FPRASP
Trigger: TGGGCTCGCTCTAGGGAAGCAAGGCAGGAGCGCACT...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTTGGTGACTTGCATGTaGCCCTCTTTGTTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVLVTCM*PSLLRG
Trigger: CCCCCTCAACAAAGAGGGGCACATGCAAGTCACCAA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATTCCTCGTCCTGCCTCTaGATGCGAGAGTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNSSSCL*MRELGT
Trigger: GGTCCCCAACTCTCGCATCCAGAGGCAGGACGAGGA...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCAGCAGGCTGCGAGGCTaGCTGGGCACCATCCACCCC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVSRLRG*LGTIHP
Trigger: GGGGTGGATGGTGCCCAGCCAGCCTCGCAGCCTGCT...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCTGGAAAACCTTGTACTaGCTCTCTCGGCTGGCAACG +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCWKTLY*LSRLAT
Trigger: CGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCA...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGAGAGCCTTTTCTGCTaGATCTCAGAGTACTCCTTT +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLESLFC*ISEYSF
Trigger: AAAGGAGTACTCTGAGATCCAGCAGAAAAGGCTCTC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGCTCCTCGGGAGTCATaGAGAGCCTTTTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVAPRES*RAFSAG
Trigger: TCCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACAAGTGCAGGAGCATCTaGTCCGTGGCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHKCRSI*SVASCC
Trigger: GCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTT...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACCCCGTTCATGTGCATaGCCAGGTTTCCGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTPRSCA*PGFRSA
Trigger: TGCACTTCGGAAACCTGGCCATGCACATGAACGGGG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTAGATGTCCCTGGGCCTaGACAGGACCCCGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFRCPWA*TGPRCV
Trigger: AACACAGCGGGGTCCTGTCCAGGCCCAGGGACATCT...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACTTGCAAAGATGTCCCTaGGCCTGGACAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHLQRCP*AWTGPR
Trigger: GCGGGGTCCTGTCCAGGCCCAGGGACATCTTTGCAA...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATTGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCTGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCA +
Preference number: 4 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSCPCLG*SANTLP
Trigger: TGGTAGTGTATTAGCTGACCAACCAAGACAAGGACA...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLALGSTC*TTWVHG
Trigger: TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCTTGGAAGTACCTGCTaGACGACCTGGGTTCATGGA +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGLGSTC*TTWVHG
Trigger: TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATAGTGCACGGTGGGGGTaGCACTTGGTGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNSARWG*HLVQRC
Trigger: GCATCTCTGCACCAAGTGCCACCCCCACCGTGCACT...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGAGATTAAGGGAGTTGTaGAGGGGCGGGGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVRLREL*RGGASP
Trigger: TGGAGAAGCCCCGCCCCTCCACAACTCCCTTAATCT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATAAACCTCCCCCTGCCTaGCACTTCGGCTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNKPPPA*HFGWSG
Trigger: TCCTGACCAGCCGAAGTGCCAGGCAGGGGGAGGTTT...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGGGTCTCTTCCCTGAGTaGCAGGTGTGGTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QESTNFGQTISRLWVWPWGLFPE*QVWSLG
Trigger: TCCCAGGGACCACACCTGCCACTCAGGGAAGAGACC...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCCCTCCCACTCCCACATaGACAAAGATTTCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSPPTPT*TKISLN
Trigger: GTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGG...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAAGGTCTGGACTTCTCTaGGTGGATGTGAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTRSGLL*VDVREG
Trigger: ACCCTCCCTCACATCCACCCAGAGAAGTCCAGACCT...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp CACACGCACACATCGACCCATTCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTGACCTTAAACAACGCC +
Preference number: 4 (lower is better)
Translates to: HTHTSTHSSPSW*LYLVELTLNNA
Trigger: GGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGTGTGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTCGTCTTTGTCCACAGTaGACTGCACATTACGCCAGA +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFRLCPQ*TAHYAR
Trigger: TCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACG...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCGTCTTTGTCCACAGTaGACTGCACATTACGCCAGA +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGRLCPQ*TAHYAR
Trigger: TCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCAGAAGCAACATGGATaGGAAGCCCACCCCATTCCC +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIQKQHG*EAHPIP
Trigger: GGGAATGGGGTGGGCTTCTCATCCATGTTGCTTCTG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCTTCCTAGTCAGAGACTaGATGGCATATTTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSFLVRD*MAYFQS
Trigger: GCTTTGAAAATATGCCATTCAGTCTCTGACTAGGAA...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGGATGGAGAACTGCATaGATGTCTTATCGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQGWRTA*MSYRGR
Trigger: TCGCCCCCGATAAGACATGCATGCAGTTCTCCATCC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCGAGCCTCTTGTACATaGTCTCCTCGGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFRASCT*SPRGAS
Trigger: AGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAACGAAGATCGTGTTCTaGATCAAACCCACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGTKIVF*IKPTKH
Trigger: GTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGT...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGCCAGGTTTCCGAAGTaGAGGAGCATCTGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPARFPK*RSIWSV
Trigger: CACGGACCAGATGCTCCTGCACTTCGGAAACCTGGC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTCTTTGGGCCCTTCTTaGCTTCCCTCAGGGACTTGG +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGISLGPS*LPSGTW
Trigger: CCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGA...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCTCTGCTTTCCTCATTaGCTGGCGACGCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNLCFPH*LATLSG
Trigger: GCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPRSGFL*KWLDTS
Trigger: AGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCT...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGCCAGGTCCGACCTCTaGACCATGAGCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEARSDL*TMSIPW
Trigger: CCAGGGGATGCTCATGGTGCAGAGGTCGGACCTGGC...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGCATTCACACACACATaGCTGGCGGGATCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPAFTHT*LAGSQR
Trigger: CCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCGCTCATTTGAGGGTGTaGAGGGTACATATGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPAHLRV*RVHMCL
Trigger: CAGACACATATGTACCCTGCACACCCTCAAATGAGC...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGTTGTTCTCTTGAGATaGAGAGAGGAGGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQVVLLR*REEAHR
Trigger: CCTGTGGGCCTCCTCTCTGCATCTCAAGAGAACAAC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCTCATTGGGAGCTGGCTaGTGCGCCCAGCCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVSLGAG*CAQPEA
Trigger: GGCCTCAGGCTGGGCGCAGCAGCCAGCTCCCAATGA...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACT +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANRRTAA*GGGWRT
Trigger: AGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANGPRPR*APPGPT
Trigger: TGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTAGAAGGAGCCAGCGGTaGCAGAAGAGCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFRRSQR*QKSICR
Trigger: CCTGCAGATGCTCTTCTGCCACCGCTGGCTCCTTCT...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCACTCCACCGCGGGCATaGAGCCGCTGTCCCACATGC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVTPPRA*SRCPTC
Trigger: GCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGT...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCTCGACACTTCTAAGCTaGCTGGGAGTTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCSTLLS*LGVLTA
Trigger: TGCTGTGAGAACTCCCAGCCAGCTTAGAAGTGTCGA...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGTCCTCGCTCAAGGAGTaGCTTTCTGTGCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: STSRVFLPRRTRWRISGGSSLKE*LSVQMA
Trigger: AGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGA...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATCCTCGCTCAAGGAGTaGCTTTCTGTGCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLASSLKE*LSVQMA
Trigger: AGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCT +
Preference number: 4 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEEKSFE*EEAFYP
Trigger: AGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACTGCTTTGAAGTGGCATaGCCCAGCAGTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHCFEVA*PSSAHP
Trigger: AGGGTGGGCACTGCTGGGCCATGCCACTTCAAAGCA...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGACGACCTGGGTTCATaGAGAAAAGAGAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEDDLGS*RKEKPR
Trigger: TCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTGACGACCTGGGTTCATaGAGAAAAGAGAAGCCGAGA +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLADDLGS*RKEKPR
Trigger: TCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTC...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACTTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDLGRQT*ELGSTC
Trigger: GCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAACTGCTAGACAGCAATaGTCGGTACCCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQTARQQ*SVPQDL
Trigger: CAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGT...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCAGGTGCAGACCTCACTaGGGTCCGGGCCAGCCCATG +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVRCRPH*GPGQPM
Trigger: CATGGGCTGGCCCGGACCCCAGTGAGGTCTGCACCT...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAACCTAATGCCTCTCGCTaGCTGGGAATAATCCCGGGG +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTEPNASR*LGIIPG
Trigger: CCCCGGGATTATTCCCAGCCAGCGAGAGGCATTAGG...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCACCTCTATTCCCTGTaGCCTCCAAAAGAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIHLYSL*PPKELG
Trigger: GCCCAGCTCTTTTGGAGGCCACAGGGAATAGAGGTG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCTGAGGCTCATTCCCTaGGGACTCCAAGAATGGGGC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHLRLIP*GLQEWG
Trigger: GCCCCATTCTTGGAGTCCCCAGGGAATGAGCCTCAG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGCGGTTCCCTCTGACTaGAGACAGGACAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVAVPSD*RQDRML
Trigger: AAGCATTCTGTCCTGTCTCCAGTCAGAGGGAACCGC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACCTGAGTGGCAGGTGTaGTCCCTGGGACTTCATAAA +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTPEWQV*SLGLHK
Trigger: TTTATGAAGTCCCAGGGACCACACCTGCCACTCAGG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATTCACCCAGGGGCCAGTaGGGTGGCTTTGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNSPRGQ*GGFAHL
Trigger: CAAATGAGCAAAGCCACCCCACTGGCCCCTGGGTGA...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGGTAAGAGTCACGCCTTaGAGAAGGAGGGCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMVRVTP*RRRAAK
Trigger: TTTGGCTGCCCTCCTTCTCCAAGGCGTGACTCTTAC...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCGCTCATGGCCTGTCCTaGGCACGGGGAGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSAHGLS*ARGGRE
Trigger: CTCCCTTCCTCCCCGTGCCCAGGACAGGCCATGAGC...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATAAGTGGCCACAGGTCTaGACTTCTCTGGGTGGATGT +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHKWPQV*TSLGGC
Trigger: ACATCCACCCAGAGAAGTCCAGACCTGTGGCCACTT...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCGATGGCCACGCAGATaGAAAGGTGGAAGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNRWPRR*KGGSSP
Trigger: CGGACTACTTCCACCTTTTCATCTGCGTGGCCATCG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTCTATCCTGGTCCCCATaGTGGTTCTCAGCACATCAA +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSLSWSP*WFSAHQ
Trigger: TTGATGTGCTGAGAACCATCATGGGGACCAGGATAG...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCAGGGAGAAAAGCTTTaGGTGGGAAGAAGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAQGEKL*VGRSLL
Trigger: TAGAAGGCTTCTTCCCACTCAAAGCTTTTCTCCCTG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAACGGCGGATGGAGAACTaGATGCATGTCTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTERRMEN*MHVLSG
Trigger: CCCCGATAAGACATGCATGCAGTTCTCCATCCGCCG...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTATGGAGAGCCTTTTCTaGTGGATCTCAGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFMESLF*WISEYS
Trigger: GGAGTACTCTGAGATCCAGCAGAAAAGGCTCTCCAT...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCTGGCAGAAGAGCATCTaGAGGCCGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVWQKSI*RPSSPS
Trigger: GCTGGGCGAGGACGGCCTGCAGATGCTCTTCTGCCA...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATAAGCCGAAGCCGTCCTaGGGCGTCTTTGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANKPKPS*GVFGPF
Trigger: GAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTT...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCTCAGGTGCGGTGGCTaGGCGTTCCACTGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANLRCGG*AFHCSV
Trigger: AACGCTGCAGTGGAACGCGCAGCCACCGCACCTGAG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGCGACGCTGTCTGGCTaGCCTCGAGGGTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANATLSG*PRGWSK
Trigger: TTTGCTCCACCCTCGAGGGCAGCCAGACAGCGTCGC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTTTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: DLSILFLPPKHSGSKARGFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCTCCTCAAGCCTGACTaGTCTTCCGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHLLKPD*SSASLS
Trigger: GGATAGAGAGGCGGAAGAGCAGTCAGGCTTGAGGAG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTAGGAGTGGCTTTCTGTaGAAATGGCTCGACACTTCT +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLARSGFL*KWLDTS
Trigger: AGAAGTGTCGAGCCATTTGCACAGAAAGCCACTCCT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCTGGTTTCCTCTAATTaGATCCAGATTAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLLVSSN*IQIKGV
Trigger: AACTCCCTTAATCTGGATGCAATTAGAGGAAACCAG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTAGCTTCACACTGGGCTaGTATGGAAAACTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPSFTLG*YGKLKG
Trigger: ACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCT...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGTGTGTGTGTGTGTGTaGGCATTTTCCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPVCVCV*AFSQGT
Trigger: GGTCCCCTGGGAAAATGCGCACACACACACACACAC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCAACCCCCAAGGGCATaGCTCTGGCTTCATGAACCT +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFQPPRA*LWLHEP
Trigger: AGGTTCATGAAGCCAGAGGCATGCCCTTGGGGGTTG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCGCTGCCCCTCACGATaGACACGGCTGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANRCPSR*TRLMAE
Trigger: CTCAGCCATCAGCCGTGTGCATCGTGAGGGGCAGCG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATTCCTTACCCCAAAAGTaGTGGAGGAAAGATGGTTGC +
Preference number: 4 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHSLPQK*WRKDGC
Trigger: GCAACCATCTTTCCTCCAGCACTTTTGGGGTAAGGA...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTAGGCACTGTACAGCGTaGATCTGTTGTCAGTACAGT +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFRHCTA*ICCQYS
Trigger: ACTGTACTGACAACAGATGCACGCTGTACAGTGCCT...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGCCCTGGACCCCTTTTaGACCATCCTAATTTCAACA +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRALDPF*TILIST
Trigger: TGTTGAAATTAGGATGGTGCAAAAGGGGTCCAGGGC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATACCGCCAAAGAAAATaGCCTTCCGCAGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAYRQRK*PSAACT
Trigger: AGTACAAGCTGCGGAAGGCCATTTTCTTTGGCGGTA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CCA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTACCGCCAAAGAAAATaGCCTTCCGCAGCTTGTACT +
Preference number: 4 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAYRQRK*PSAACT
Trigger: AGTACAAGCTGCGGAAGGCCATTTTCTTTGGCGGTA...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CCA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VALVKASHFGDLHVPLFVKRKCV*LAKMSL
Trigger: CAGGGACATCTTTGCAAGCCAGACACACTTCCTCTT...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCATCCCAGCTGTGGCTaGGGACGTTTTGGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHHPSCG*GRFGKC
Trigger: ACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACACACTACCACGTCCCTaGGACAAAGCAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDTLPRP*DKADHC
Trigger: ACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAAGAGGGAGAGTCTGTTaGGAAGACCTCATTCCCACA +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRRGRVC*EDLIPT
Trigger: TGTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCT...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGTCGACACTTCTAAGCTaGCTGGGAGTTCTCACAGCA +
Preference number: 4 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMSTLLS*LGVLTA
Trigger: TGCTGTGAGAACTCCCAGCCAGCTTAGAAGTGTCGA...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEGFLCK*LDTSKL
Trigger: CAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCC...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCGFLCK*LDTSKL
Trigger: CAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCC...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCGAGAAAAGCTTTGAGTaGGAAGAAGCCTTCTATCCT +
Preference number: 4 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGEKSFE*EEAFYP
Trigger: AGGATAGAAGGCTTCTTCCCACTCAAAGCTTTTCTC...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATAACACTGCTTTGAAGTaGCATGGCCCAGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNNTALK*HGPAVP
Trigger: GGGCACTGCTGGGCCATGCCACTTCAAAGCAGTGTT...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGATTAGCTTTCTAGTTTaGGGGCGGTTCCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQEISFLV*GRFPLT
Trigger: AGTCAGAGGGAACCGCCCCCAAACTAGAAAGCTAAT...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGCACCCCTGGGCATGTaGAGAGGAGGTGATGAGGCG +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVAPLGM*RGGDEA
Trigger: CGCCTCATCACCTCCTCTCCACATGCCCAGGGGTGC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGAGAGGGCATGGAAGTaGCCACAGGTCTGGACTTCT +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHERAWK*PQVWTS
Trigger: AGAAGTCCAGACCTGTGGCCACTTCCATGCCCTCTC...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCCCAGAAGGAGCAACTaGTACACAATCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCPRRSN*YTIFWK
Trigger: CTTCCAAAAGATTGTGTATCAGTTGCTCCTTCTGGG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGTCTGTACTTGATCCATaGCTTGTGAGTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: GTFWEVCLAHSERTRSQESVLDP*LVSSES
Trigger: GGACTCAGAACTCACAAGTCATGGATCAAGTACAGA...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGTATGCCCAGGTACCTaGGTCCCAGCCAAAGCGGCA +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANVCPGT*VPAKAA
Trigger: TGCCGCTTTGGCTGGGACTCAGGTACCTGGGCATAC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAATGGAGAGCCTTTTCTaGTGGATCTCAGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTMESLF*WISEYS
Trigger: GGAGTACTCTGAGATCCAGCAGAAAAGGCTCTCCAT...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACATTGTCCACAGTGAACTaGACATTACGCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTLSTVN*TLRQNA
Trigger: AGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAA...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACACGAAGATCGTGTTCTaGATCAAACCCACAAAGCAC +
Preference number: 4 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDTKIVF*IKPTKH
Trigger: GTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCAATTGTCAGAGGATCTTaGAAACACAAACACGCACGC +
Preference number: 4 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAIVRGS*KHKHAR
Trigger: GCGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAAT...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIELGST*WTTWVH
Trigger: ATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCAGACTGCTGACTCCTaGCCTAGATCAGTGCTGACT +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNQTADS*PRSVLT
Trigger: AGTCAGCACTGATCTAGGGCAGGAGTCAGCAGTCTG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCTGTCTCTCCCTCCGTaGCTTTGGCTGTGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANLSLPP*LWLCHG
Trigger: GCCATGGCACAGCCAAAGGCACGGAGGGAGAGACAG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCCCCACATCTATTTCTaGCAAACAAGAAGCAGACGA +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRPHIYF*QTRSRR
Trigger: TCGTCTGCTTCTTGTTTGGCAGAAATAGATGTGGGG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCCCCACATCTATTTCTaGCAAACAAGAAGCAGACGA +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCPHIYF*QTRSRR
Trigger: TCGTCTGCTTCTTGTTTGGCAGAAATAGATGTGGGG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCCCCCTTCCACAGCACTaGCTCTCACCCTTCTCCCGA +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSPLPQH*LSPFSR
Trigger: TCGGGAGAAGGGTGAGAGGCAGTGCTGTGGAAGGGG...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTTCCTTACCCCAAAAGTaGTGGAGGAAAGATGGTTGC +
Preference number: 4 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSSLPQK*WRKDGC
Trigger: GCAACCATCTTTCCTCCAGCACTTTTGGGGTAAGGA...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGCCCAGCACAGAGCCTaGCGTGCTTTGACCCAGCAA +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVAQHRA*RALTQQ
Trigger: TTGCTGGGTCAAAGCACGGCAGGCTCTGTGCTGGGC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGTGTCTTTTTCTATTGTaGTTGTTCATGGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKCLFLL*LFMARN
Trigger: ATTCCTGGCCATGAACAAGCACAATAGAAAAAGACA...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATCAGTATTTCCACTGCTaGAACACGTCAGACAGCTTG +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHQYFHC*NTSDSL
Trigger: CAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTG...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCCCAGCTCATTCAGGTaGTTGAGCCAGGCGGAGACG +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANPSSFR*LSQAET
Trigger: CGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGCTTTCCTCATTGCCTaGCGACGCTGTCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVAFLIA*RRCLAA
Trigger: GGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQKRKCV*LAKMSL
Trigger: CAGGGACATCTTTGCAAGCCAGACACACTTCCTCTT...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATGGCTGGGGACGTTTTaGGAAGTGTGTTTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTEWLGTF*EVCLAH
Trigger: GTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCCTGGCTCCTTCACTGTaGTCGCTCTCACGTCCGACC +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSLAPSL*SLSRPT
Trigger: GGTCGGACGTGAGAGCGACCACAGTGAAGGAGCCAG...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGGCTTTCTGTGCAAATaGCTCGACACTTCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRGFLCK*LDTSKL
Trigger: CAGCTTAGAAGTGTCGAGCCATTTGCACAGAAAGCC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAATTTCAGGAGGGATTTaGTCTCCTCGCTCAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTISGGI*SPRSRS
Trigger: ACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAAT...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCACTGCTAGACAGCAATaGTCGGTACCCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPTARQQ*SVPQDL
Trigger: CAGATCCTGGGGTACCGACCATTGCTGTCTAGCAGT...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATGGCAGGTGTGGTCCCTaGGACTTCATAAACCATCCT +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNGRCGP*DFINHP
Trigger: AGGATGGTTTATGAAGTCCCAGGGACCACACCTGCC...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATCAGGAGTGGGCAGAATaGGGTGCATTTTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHQEWAE*GAFYRR
Trigger: TCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTG...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCCTGGGCCTGACCAATaGGTGATTACATTTAAAAAC +
Preference number: 4 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSPGPDQ*VITFKN
Trigger: GTTTTTAAATGTAATCACCCATTGGTCAGGCCCAGG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATTCTCTTGCCCGGCGTaGGTGACTACACAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTEFSCPA*VTTQLS
Trigger: TGACAACTGTGTAGTCACCCACGCCGGGCAAGAGAA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGCAGCAGGTGTCTCCTaGTCTGGAGAGGGCATGGAA +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEAAGVS*SGEGME
Trigger: TTCCATGCCCTCTCCAGACCAGGAGACACCTGCTGC...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
3UTR CAA 72 bp ACATCGACCCATTCAAGCCCCAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAACAACGCCAAGGAACCT +
Preference number: 4 (lower is better)
Translates to: TSTHSSPSWLLY*VELTLNNAKEP
Trigger: AGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATGGGTCGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATCAGCGTTTCAGGAGCTaGCTTTCCTCTGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANQRFRS*LSSGWL
Trigger: CAGCCACCCAGAGGAAAGTCAGCTCCTGAAACGCTG...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTCACGTCCGACCACCTaGGAAGCTGACTTACATATC +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPSRPTT*EADLHI
Trigger: GATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTGATGGTTGCATGACTTaGCCTCTCTTTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFDGCMT*PLFELE
Trigger: TTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATC...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCGATGGTTGCATGACTTaGCCTCTCTTTGAACTTGAA +
Preference number: 4 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCDGCMT*PLFELE
Trigger: TTCAAGTTCAAAGAGAGGTCAAGTCATGCAACCATC...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAGGAAAGATGGTTGCATaGCTTGACCTCTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQGKMVA*LDLSLN
Trigger: GTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCC...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGCGTGGGATGAATGCATaGATGATGTGGAAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QESTNFGQTISRLWVWPWRGMNA*MMWKEP
Trigger: TGGCTCCTTCCACATCATTCATGCATTCATCCCACG...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGGACACGTGCTCGCCTaGGTCTCTGGAGTAAGAGTC +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANGHVLA*VSGVRV
Trigger: GACTCTTACTCCAGAGACTCAGGCGAGCACGTGTCC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACTTTGGAGGAGGCCCTaGGAAGGAGGCGGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKLWRRP*EGGGPE
Trigger: CTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCCAAAG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATAGCTTACACAGATCGTaGAGGCTGCAGGGGATCCGG +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANSLHRS*RLQGIR
Trigger: CCGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCT...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGGAACTTGGAAGTACCTaGTGGACGACCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: QESTNFGQTISRLWVWPWELGST*WTTWVH
Trigger: ATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGATGGAGAGCTTTaGACATGCATTCACACACAC +
Preference number: 4 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVSDGEL*TCIHTH
Trigger: GTGTGTGTGAATGCATGTGCAAAGCTCTCCATCAGA...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGCGTCTCAGGTGCGGTaGCTGCGCGTTCCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKASQVR*LRVPLQ
Trigger: CTGCAGTGGAACGCGCAGCCACCGCACCTGAGACGC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCAGAGGGAGAGTCTGTTaGGAAGACCTCATTCCCACA +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPRGRVC*EDLIPT
Trigger: TGTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCT...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTELGRQT*ELGSTC
Trigger: GCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCGGAGAGCTGCAGGTGTaGTGTCCACCAAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSGELQV*CPPRLG
Trigger: TCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCC...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCGCGGGGTTTTTGGCTaGTTTCCTCTAATTGCATCC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHRGVFG*FPLIAS
Trigger: GGATGCAATTAGAGGAAACCAGCCAAAAACCCCGCG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCCAAGGGCATGCCTCTaGCTTCATGAACCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVPRACL*LHEPSG
Trigger: CCCCGAAGGTTCATGAAGCCAGAGGCATGCCCTTGG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
3UTR CAA 72 bp CATTCAAGCCCCAGCTGGTTGCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAGGAACCTCACGTAGAA +
Preference number: 4 (lower is better)
Translates to: HSSPSWLLYLVE*TLNNAKEPHVE
Trigger: TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCTGGGGCTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp AGAGCGCTGACCTCCCATCTCAGGACTTCTTGGCCCTaGCCCATTGCCATACTCTACTGTCAGATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: RALTSHLRTSWP*PIAILYCQILK
Trigger: TTTTAAAATCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCTGAGATGGGAGGTCAGCGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAAATCCTGGGACATGTTaGAATCCTCCAGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVENPGTC*NPPGQP
Trigger: TGGCTGCCCTGGAGGATTTCAACATGTCCCAGGATT...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACATGGAGAGCCTTTTCTaGTGGATCTCAGAGTACTCC +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHMESLF*WISEYS
Trigger: GGAGTACTCTGAGATCCAGCAGAAAAGGCTCTCCAT...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTTGTCCACAGTGAACTaGACATTACGCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPLSTVN*TLRQNA
Trigger: AGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGAAAAAGGCATCAGATaGTTCTCCAACAGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHEKGIR*FSNSLR
Trigger: CCTCAGGCTGTTGGAGAAGCATCTGATGCCTTTTTC...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTATTGTCAGAGGATCTTaGAAACACAAACACGCACGC +
Preference number: 4 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIIVRGS*KHKHAR
Trigger: GCGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAAT...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCTGGTTTCCTCTAATTaGATCCAGATTAAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRLVSSN*IQIKGV
Trigger: AACTCCCTTAATCTGGATGCAATTAGAGGAAACCAG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGGAGACAGGACAGAATaGTTTCACACCCAGGAACGG +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEGDRTE*FHTQER
Trigger: CCGTTCCTGGGTGTGAAAGCATTCTGTCCTGTCTCC...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACGCTGCCCCTCACGATaGACACGGCTGATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKRCPSR*TRLMAE
Trigger: CTCAGCCATCAGCCGTGTGCATCGTGAGGGGCAGCG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAATGGCTGCAGGCTGTTTaGACCCCTGGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKWLQAV*TPGSAQ
Trigger: CTGGGCAGAGCCAGGGGTGCAAACAGCCTGCAGCCA...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGGCGAGCATGCGGTCTaGAACACTCTGGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKGEHAV*NTLGHH
Trigger: GTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCAAGAGGAAGTGTGTCTaGCTTGCAAAGATGTCCCTG +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPKRKCV*LAKMSL
Trigger: CAGGGACATCTTTGCAAGCCAGACACACTTCCTCTT...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATGGCAATGGATATAACTaGTTTCTAGCGGAGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNGNGYN*FLAEGQ
Trigger: CTGACCCTCCGCTAGAAACCAGTTATATCCATTGCC...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAACAGGAGTGGGCAGAATaGGGTGCATTTTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: YPLFARSGGGKARSLMTEQEWAE*GAFYRR
Trigger: TCTTCTGTAAAATGCACCCCATTCTGCCCACTCCTG...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAATGTGTTTCCAGGCACTaGGGTGGGAGCGAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKCVSRH*GGSEAP
Trigger: GGGAGCCTCGCTCCCACCCCAGTGCCTGGAAACACA...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCCCAGAAGGAGCAACTaGTACACAATCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNPRRSN*YTIFWK
Trigger: CTTCCAAAAGATTGTGTATCAGTTGCTCCTTCTGGG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR TCA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCCCAGAAGGAGCAACTaGTACACAATCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFPRRSN*YTIFWK
Trigger: CTTCCAAAAGATTGTGTATCAGTTGCTCCTTCTGGG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAACCCTCCCTCTGTACTTaGTCCATGACTTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEPSLCT*SMTCEF
Trigger: GAACTCACAAGTCATGGATCAAGTACAGAGGGAGGG...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGGGGGCGGTTCCCTCTaGCTGGAGACAGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKGGGSL*LETGQN
Trigger: ATTCTGTCCTGTCTCCAGTCAGAGGGAACCGCCCCC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGCAGGATCCTCCTCATaGTCTCCACATTGGGATTGT +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEAGSSS*SPHWDC
Trigger: ACAATCCCAATGTGGAGAGCATGAGGAGGATCCTGC...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACGTCATCCCCGTAGATaGCCACGATGGCCACGCAGA +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKRHPRR*PRWPRR
Trigger: TCTGCGTGGCCATCGTGGCCATCTACGGGGATGACG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGAGCTGACTTTCCTCTaGGTGGCTGTAGATCTGACT +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEELTFL*VAVDLT
Trigger: AGTCAGATCTACAGCCACCCAGAGGAAAGTCAGCTC...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGATTTGCTTTTCTTTTATaGCAGATGCCTTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRFAFLL*QMPFHR
Trigger: CCGATGGAAAGGCATCTGCCATAAAAGAAAAGCAAA...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCGGTCCTGAAGGGAAGTaGAAGAGTCTAACTATTTCC +
Preference number: 4 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPGPEGK*KSLTIS
Trigger: GGAAATAGTTAGACTCTTCCACTTCCCTTCAGGACC...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCACCATGAGCATCCCCTaGGACTTAACAACCCACTGG +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSTMSIP*DLTTHW
Trigger: CCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGT...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGTGTCCACCAAGGCTTaGAAAGGCACTTGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVVSTKA*KGTCCL
Trigger: GAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACAC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACTTACCCCAAAAGTGCTaGAGGAAAGATGGTTGCATG +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHLPQKC*RKDGCM
Trigger: CATGCAACCATCTTTCCTCCAGCACTTTTGGGGTAA...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACAGGACAGGTCCAGTTaGTGGCCTGAGGTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKQDRSS*WPEVGL
Trigger: CAACCCCACCTCAGGCCACCAACTGGACCTGTCCTG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAATGCTGGTCTTTGAGCTaGATCTCGGTGCAGTATTTC +
Preference number: 4 (lower is better)
Translates to: LLYLVELTLNNAKEPHVECWSLS*ISVQYF
Trigger: GAAATACTGCACCGAGATGCAGCTCAAAGACCAGCA...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACTGTCCTTGTCTTGGTTaGTCAGCTAATACACTACCA +
Preference number: 4 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHCPCLG*SANTLP
Trigger: TGGTAGTGTATTAGCTGACCAACCAAGACAAGGACA...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCTCCTCGCTCAAGGAGTaGCTTTCTGTGCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVSSLKE*LSVQMA
Trigger: AGCCATTTGCACAGAAAGCCACTCCTTGAGCGAGGA...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATACCTGCTGGACGACCTaGGTTCATGGAGAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANTCWTT*VHGEKR
Trigger: TCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGT...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCTTAGGCAGACAGACCTaGGAACTTGGAAGTACCTGC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVLGRQT*ELGSTC
Trigger: GCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAA...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
3UTR CAA 72 bp CTATTGTGCTTGTTCATGGCCAGGAATCAACGAACTTaGGACAGACAATCAGTAGACTTTGGGTGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LLCLFMARNQRT*DRQSVDFGCGL
Trigger: AAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTGGCCATGAACAAGCACAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR GCA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATTTAAAAATTCACAAATaGAGGACTGAGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: APPTPTWTKISLNGATSHLKIHK*RTEAFP
Trigger: AGGAAAAGCCTCAGTCCTGCATTTGTGAATTTTTAA...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAAGAGATGCAGCTGATTaGTCCGGGTCAGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKRDAAD*SGSGLG
Trigger: CCCAAGACCTGACCCGGACCAATCAGCTGCATCTCT...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCCACACTGGGCTGCTATaGAAAACTGAAAGGTCAGAG +
Preference number: 4 (lower is better)
Translates to: VPFVYQEDEMFKRINITSHTGLL*KTERSE
Trigger: CTCTGACCTTTCAGTTTTCCATAGCAGCCCAGTGTG...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAATGGAGCCTGTGCGGCTaGTTGAGTGTAAACGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKWSLCG*LSVNAE
Trigger: CTCAGCGTTTACACTCAACCAGCCGCACAGGCTCCA...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR TCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATTCTGTACTTGATCCATaGCTTGTGAGTTCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANSVLDP*LVSSES
Trigger: GGACTCAGAACTCACAAGTCATGGATCAAGTACAGA...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGGAAAGATGGTTGCATaGCTTGACCTCTCTTTGAAC +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVGKMVA*LDLSLN
Trigger: GTTCAAAGAGAGGTCAAGTCATGCAACCATCTTTCC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR GCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCTTCTTTTATGGCAGATaGCTTTCCATCGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVFFYGR*LSIGIP
Trigger: TGGGATGCCGATGGAAAGGCATCTGCCATAAAAGAA...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGAGAGCCTTTTCTGCTaGATCTCAGAGTACTCCTTT +
Preference number: 4 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVESLFC*ISEYSF
Trigger: AAAGGAGTACTCTGAGATCCAGCAGAAAAGGCTCTC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATTTACCCCAAAAGTGCTaGAGGAAAGATGGTTGCATG +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANLPQKC*RKDGCM
Trigger: CATGCAACCATCTTTCCTCCAGCACTTTTGGGGTAA...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR TCA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGGCCTGACCAATGGGTaGTTACATTTAAAAACCAAA +
Preference number: 4 (lower is better)
Translates to: KWKSLTISRCPCLGWSANGLTNG*LHLKTK
Trigger: TTTGGTTTTTAAATGTAATCACCCATTGGTCAGGCC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAACACTACCACGTCCCTaGGACAAAGCAGATCATTGT +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKTLPRP*DKADHC
Trigger: ACAATGATCTGCTTTGTCCCAGGGACGTGGTAGTGT...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR GCA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAAGCTTCACACTGGGCTaGTATGGAAAACTGAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSMRTHVRQPITLSVILKSFTLG*YGKLKG
Trigger: ACCTTTCAGTTTTCCATAGCAGCCCAGTGTGAAGCT...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS GCA 90 bp TGCTCCAGGGCGCACACCCGCTGCGGCTCGTCCCAGCGTGGGGTCTaGAGGAGGCCGTTGCTGTCCGGGAACCGCAGGCCGGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: CSRAHTRCGSSQRGV*RRPLLSGNRRPASE
Trigger: CTCCGACGCCGGCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS GCA 90 bp CCGTGCCCCCGTAGGGACAGCTCTCCGAGCCGGGATGGTGGCCGGTaGACTCCACCGCGGGCATGGAGCCGCTGTCCCACATGCCTGACC +
Preference number: 5 (lower is better)
Translates to: PCPRRDSSPSRDGGR*TPPRAWSRCPTCLT
Trigger: GGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAGCTGTCCCTACGGGGGCACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp GCAAATCTGCTCCAGGGCGCACACCCGCTGCGGCTCGTCCCAGCGTaGGGTCTGCAGGAGGCCGTTGCTGTCCGGGAACCGCAGGCCGGC +
Preference number: 5 (lower is better)
Translates to: ANLLQGAHPLRLVPA*GLQEAVAVREPQAG
Trigger: GCCGGCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAGCAGATTTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS GCA 90 bp AGGGAGCGCATGTGGCCCAGGTCCACGCGGAACACGCCGCAAATCTaGTCCAGGGCGCACACCCGCTGCGGCTCGTCCCAGCGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RERMWPRSTRNTPQI*SRAHTRCGSSQRGV
Trigger: GACCCCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAGCAGATTTGCGGCGTGTTCCGCGTGGACCTGGGCCACATGCGCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS GCA 90 bp CAAGCAGGCTGCGAGGCTGGCTGGGCACCATCCACCCCCAAGCCCTaGGCCAGCTTCTCCTCATCCTCTGGCGCAGGGCTGGCGAGCATG +
Preference number: 5 (lower is better)
Translates to: QAGCEAGWAPSTPKP*ASFSSSSGAGLASM
Trigger: CATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAGCTGGCGCAGGGCTTGGGGGTGGATGGTGCCCAGCCAGCCTCGCAGCCTGCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS TCA 90 bp GCCGGTGCACTCCACCGCGGGCATGGAGCCGCTGTCCCACATGCCTaGCCCGCACAGCTTACACAGATCGTGCAGGCTGCAGGGGATCCG +
Preference number: 5 (lower is better)
Translates to: AGALHRGHGAAVPHA*PAQLTQIVQAAGDP
Trigger: CGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp CGAGGCTTTGGAGGAGGCCCTGCGAAGGAGGCGGCCCAGAGACATTaGCGGGCAAGTGTTTCCATCCTCCGCATGCGTCGGCCCGGGCAG +
Preference number: 5 (lower is better)
Translates to: RGFGGGPAKEAAQRH*RASVSILRMRRPGQ
Trigger: CTGCCCGGGCCGACGCATGCGGAGGATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCCAAAGCCTCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp AGCCAGGCGGAGACGCCGAGCCTCTTGTACATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTGC +
Preference number: 5 (lower is better)
Translates to: SQAETPSLLYMLSSG*VSEDGSLGRRMENC
Trigger: GCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTCCGCCTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 90 bp GGTGGCCGGTGCACTCCACCGCGGGCATGGAGCCGCTGTCCCACATaGCTGACCCGCACAGCTTACACAGATCGTGCAGGCTGCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GGRCTPPRAWSRCPT*LTRTAYTDRAGCRG
Trigger: TCCCCTGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp CCTTCTTGCCTTCCCTCAGGGACTTGGGGGAAGGCATCTCCACCGTaGCCCCGTAGGGACAGCTCTCCGAGCCGGGATGGTGGCCGGTGC +
Preference number: 5 (lower is better)
Translates to: PSCLPSGTWGKASPP*PRRDSSPSRDGGRC
Trigger: GCACCGGCCACCATCCCGGCTCGGAGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp TCCGGTGTCGGGGGCCCGACCTATCTGCGGAAGCCGAAGCCGTCCTaGGGCGTCTTTGGGCCCTTCTTGCCTTCCCTCAGGGACTTGGGG +
Preference number: 5 (lower is better)
Translates to: SGVGGPTYLRKPKPS*GVFGPFLPSLRDLG
Trigger: CCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCCCGACACCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp GGCACCATCCACCCCCAAGCCCTGCGCCAGCTTCTCCTCATCCTCTaGCGCAGGGCTGGCGAGCATGCGGTCTGGAACACTCTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: GTIHPQALRQLLLIL*RRAGEHAVWNTLGH
Trigger: GTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAGCTGGCGCAGGGCTTGGGGGTGGATGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp CTGGTGCAGGCCTCGTCGCTGAAGAAAAGGCGGAGGGAGCGCATGTaGCCCAGGTCCACGCGGAACACGCCGCAAATCTGCTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LVQASSLKKRRRERM*PRSTRNTPQICSRA
Trigger: CGCCCTGGAGCAGATTTGCGGCGTGTTCCGCGTGGACCTGGGCCACATGCGCTCCCTCCGCCTTTTCTTCAGCGACGAGGCCTGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp AGCTCTCCGAGCCGGGATGGTGGCCGGTGCACTCCACCGCGGGCATaGAGCCGCTGTCCCACATGCCTGACCCGCACAGCTTACACAGAT +
Preference number: 5 (lower is better)
Translates to: SSPSRDGGRCTPPRA*SRCPTCLTRTAYTD
Trigger: ATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp CGTCCTGCGGCGTCTTTGGGCCCTTCTTGCCTTCCCTCAGGGACTTaGGGGAAGGCATCTCCACCGTGCCCCCGTAGGGACAGCTCTCCG +
Preference number: 5 (lower is better)
Translates to: RPAASLGPSCLPSGT*GKASPPCPRRDSSP
Trigger: CGGAGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LSQEGNLDPGQGRADDRMETPSL*YMLSSG
Trigger: CCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTC...CATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp CTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGAGCTCATTCAGGTGGTaGAGCCAGGCGGAGACGCCG +
Preference number: 5 (lower is better)
Translates to: LSQEGNLDPGQGRADDRMSSFRW*SQAETP
Trigger: CGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCT...CATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp CTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGACCGCATGCAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: LSQEGNLDPGQGRADDRMQVRHP*GIADGR
Trigger: CCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTG...CATGCGGTCATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTCCCAGTCCCGTTGCCTaGGAGGCGGTGACATCAGGG +
Preference number: 5 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSPSPVA*EAVTSG
Trigger: CCCTGATGTCACCGCCTCCAAGGCAACGGGACTGGG...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS TCA 90 bp CACTTTCCAGAAACACGGAGCCGCGGCTCTCGGCCAGCGCCGCGCTaGTGGGCGAGAGGCAGAAGGGCGAGGAGAAGGTGTCTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: HFPETRSRGSRPAPR*WARGRRARRRCLSL
Trigger: CAGACTCAGACACCTTCTCCTCGCCCTTCTGCCTCTCGCCCATCAGCGCGGCGCTGGCCGAGAGCCGCGGCTCCGTGTTTCTGGAAAGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp GAGCCGCTGTCCCACATGCCTGACCCGCACAGCTTACACAGATCGTaGAGGCTGCAGGGGATCCGGGGCAGGAGGCGGAACTGGTACAGC +
Preference number: 5 (lower is better)
Translates to: EPLSHMPDPHSLHRS*RLQGIRGRRRNWYS
Trigger: GCTGTACCAGTTCCGCCTCCTGCCCCGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp ATCTGCGGAAGCCGAAGCCGTCCTGCGGCGTCTTTGGGCCCTTCTTaGCTTCCCTCAGGGACTTGGGGGAAGGCATCTCCACCGTGCCCC +
Preference number: 5 (lower is better)
Translates to: ICGSRSRPAASLGPS*LPSGTWGKASPPCP
Trigger: GGGGCACGGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp GGGCCCGACCTATCTGCGGAAGCCGAAGCCGTCCTGCGGCGTCTTTaGGCCCTTCTTGCCTTCCCTCAGGGACTTGGGGGAAGGCATCTC +
Preference number: 5 (lower is better)
Translates to: GPDLSAEAEAVLRRL*ALLAFPQGLGGRHL
Trigger: GAGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp GGCCGCCGTGGTGGAAGTGGAAAACCTTGTACTGGCTCTCTCGGCTaGCAACGACCAGCTGGCCGCTGGTGCAGGCCTCGTCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRRGGSGKPCTGSLG*QRPAGRWCRPRRSF
Trigger: GAAGGAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571872.1
ENST00000574241.6
CDS-3UTR CAA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCCAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLQVRHP*GIADGR
Trigger: CCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTG...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGCGTCCTGCGGCGTCTTaGGGCCCTTCTTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLRPAAS*GPSCLP
Trigger: GGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACG...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QLMASEVLAGPRGADLTGSPSVP*AVPWLA
Trigger: GGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CCCAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGCCCAGCCACGTGACTaGCTGTGGCCAAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PSSWLPRSWLVREVQTSLAQPRD*LWPRGE
Trigger: CTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGGC...CAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS TCA 90 bp GCAGCCCCTCCGGCGGGTGCACGCAGACATTGTTCTTGGAGTAGATaGTCTCTCCATCCAGGACAGAGGGGGACCCGCTGCCGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: AAPPAGARRHCSWSR*SLHPGQRGTRCRCH
Trigger: GTGGCAGCGGCAGCGGGTCCCCCTCTGTCCTGGATGGAGAGATCATCTACTCCAAGAACAATGTCTGCGTGCACCCGCCGGAGGGGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp GGGTGCGTCTCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGCTGGTCTTTGAGCTGC +
Preference number: 5 (lower is better)
Translates to: GCVSEDGSLGRRMEN*MHVLSGATCWSLSC
Trigger: GCAGCTCAAAGACCAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp GGGTGCGTCTCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGCTGGACGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GCVSEDGSLGRRMEN*MHVLSGATCWTGGK
Trigger: TTTTCCTCCCGTCCAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573782.5
ENST00000574427.1
CDS CCA 90 bp GACAGCTTGTCCAGGCCGCCGTGGTGGAAGTGGAAAACCTTGTACTaGCTCTCTCGGCTGGCAACGACCAGCTGGCCGCTGGTGCAGGCC +
Preference number: 5 (lower is better)
Translates to: DSLSRPPWWKWKTLY*LSRLATTSWPLVQA
Trigger: GGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 90 bp AGCAGGAAGGGCCAGACCTTCCGCAGCTTGTACTCCTCCTCCACCTaGCCCAGCTCATTCAGGTGGTTGAGCCAGGCGGAGACGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SRKGQTFRSLYSSST*PSSFRWLSQAETPS
Trigger: GCTCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGGCCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGTCTGGCCCTTCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573782.5
ENST00000574241.6
ENST00000576768.5
CDS CCA 90 bp ACCCGGGCCAGGGGCGAGCCGATGACCGCATGCAAAGGCGGCGTGTaGTACCGGCACTCGGTGGCTTCAGACTCGCTTTCATCAGACATC +
Preference number: 5 (lower is better)
Translates to: TRARGEPMTACKGGV*YRHSVASDSLSSDI
Trigger: GATGTCTGATGAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGGTCATCGGCTCGCCCCTGGCCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp ACCACGTTGCCTCTTGGGTGCCAGCACGCCCACATCAAAGGTGTCCCCTCTTCCTCGGAGGACGGCAGCTaGGGGCGGCGGATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: TTLPLGCQHAHIKGVPSSSEDGS*GRRMEN
Trigger: GTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA...GGAAGAGGGGACACCTTTGATGTGGGCGTGCTGGCACCCAAGAGGCAACGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp CTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCCACCCCGGAAGAACTGGTaGTTCCGATCTGTCCGGACC +
Preference number: 5 (lower is better)
Translates to: LHVHVQQAEPGGKPRPGPPRKNW*FRSVRT
Trigger: GGTCCGGACAGATCGGAACAACCAGTTCTTCCGGGG...TGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGTCCAGATTAAGGGAGTaGTGGAGGGGCGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LRDNREPGLPEARPLKSVSRLRE*WRGGAS
Trigger: AGAAGCCCCGCCCCTCCACAACTCCCTTAATCTGGA...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp TCATCCTCTGGCGCAGGGCTGGCGAGCATGCGGTCTGGAACACTCTaGGCCACCACCAGGATGTCCTCATCTTTGGGGGTCAGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SSSGAGLASMRSGTL*ATTRMSSSLGVRVG
Trigger: GCCTACCCTGACCCCCAAAGATGAGGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TCCTCTCCTGTCTCTGCTTTCCTCATTGCCTGGCGACGCTGTCTGGCTGCCCTCAGGAGGTCCGAGGCTTaGGAGGAGGCCCTGCGAAGG +
Preference number: 5 (lower is better)
Translates to: SSPVSAFLIAWRRCLAALRRSEA*EEALRR
Trigger: CCTTCGCAGGGCCTCCTCCAAAGCCTCGGACCTCCT...GAGGGCAGCCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGACAGGAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTCGGGAGTGGTGGGAATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCTCGGAGGACGGCAGCTaGGGGCGGCGGATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: FGSGGNEASQTVHAVLPFSEDGS*GRRMEN
Trigger: GTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA...GAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCATTCCCACCACTCCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp TCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATAGACCTCCCCGCGGATaGACACATCAATACCGCCAA +
Preference number: 5 (lower is better)
Translates to: SSRLSQEGNLDPGQGRADRPPRG*THQYRQ
Trigger: TTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCT...ATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp TCCAGCAGGCTGAGCCAGGAGGGAAACCTAGACCCGGGCCAGGGGCGAGCCGATGTCCGGACCACGTCTTaGTCCACAGTGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: SSRLSQEGNLDPGQGRADVRTTS*STVNCT
Trigger: TGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGAC...ATCGGCTCGCCCCTGGCCCGGGTCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp GGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGAGGCCTTCCTCGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GPRCVLQPSTQWVSEAFLGSVSG*QRCPWA
Trigger: GGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC...GAGGAAGGCCTCACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGGTCCGGGTCAGGTCTaGGGGAGCAGCAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEGPGQV*GSSRGE
Trigger: CTCACCCCTGCTGCTCCCCAAGACCTGACCCGGACC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTGCGGGACAACAGAGAGCCGGGCCTGCCCGAGGCACGGCCCCTGAAAAGTGTGAGTAAGAGTCACGCCTaGGAGAAGGAGGGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LRDNREPGLPEARPLKSVSKSHA*EKEGSQ
Trigger: TTGGCTGCCCTCCTTCTCCAAGGCGTGACTCTTACT...CACACTTTTCAGGGGCCGTGCCTCGGGCAGGCCCGGCTCTCTGTTGTCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCGCAGCTTCTGCGTCATaGGGAGCTGGCTGCTGCGCC +
Preference number: 5 (lower is better)
Translates to: LIPEPASSSCPDALPTPAAASAS*GAGCCA
Trigger: GGCGCAGCAGCCAGCTCCCAATGACGCAGAAGCTGC...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp TGTCCCACATGCCTGACCCGCACAGCTTACACAGATCGTGCAGGCTaGAGGGGATCCGGGGCAGGAGGCGGAACTGGTACAGCAAACTCC +
Preference number: 5 (lower is better)
Translates to: CPTCLTRTAYTDRAG*RGSGAGGGTGTANS
Trigger: GGAGTTTGCTGTACCAGTTCCGCCTCCTGCCCCGGATCCCCTGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp CAGCTTCTCCTCATCCTCTGGCGCAGGGCTGGCGAGCATGCGGTCTaGAACACTCTGGGCCACCACCAGGATGTCCTCATCTTTGGGGGT +
Preference number: 5 (lower is better)
Translates to: QLLLILWRRAGEHAV*NTLGHHQDVLIFGG
Trigger: ACCCCCAAAGATGAGGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp TCTTGTACATGCTCTCCTCGGGGTGCGTCTCGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACTGCATGCATGTCTTATCGGGGGCGA +
Preference number: 5 (lower is better)
Translates to: SCTCSPRGASRRTAA*GGGWRTACMSYRGR
Trigger: TCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CCA 90 bp CCGCCAAAGAAAATGGCCTTCCGCAGCTTGTACTCCTCCTCCACCTaGCCCAGCTCATTCAGGTGGTTGAGCCAGGCGGAGACGCCGAGC +
Preference number: 5 (lower is better)
Translates to: PPKKMAFRSLYSSST*PSSFRWLSQAETPS
Trigger: GCTCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGGCCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGCCATTTTCTTTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000574427.1
CDS CCA 90 bp AAGTGGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACGACCAGCTaGCCGCTGGTGCAGGCCTCGTCGCTCCTTCGTTGCGTGTGGGTG +
Preference number: 5 (lower is better)
Translates to: KWKTLYWLSRLATTS*PLVQASSLLRCVWV
Trigger: CACCCACACGCAACGAAGGAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571872.1
ENST00000574241.6
CDS-3UTR CAA 90 bp TCGTCCACCCTGCACGTCCACGTCCAGCAGGCTGAGCCAGGAGGGAAACCTAGAATGGCCTTCCGCAGCTaGTACTCCTCCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SSTLHVHVQQAEPGGKPRMAFRS*YSSSTW
Trigger: CCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGCCAT...TCTAGGTTTCCCTCCTGGCTCAGCCTGCTGGACGTGGACGTGCAGGGTGGACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTGTCCGGACCACGTCTTaGTCCACAGTGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSVRTTS*STVNCT
Trigger: TGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGAC...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp ATGGCTGGCCTGCAGGAGGGATGCAAGAGACCACAGAGCAGGGCCAGGTCCGACGTCTTTGGGCCCTTCTaGCCTTCCCTCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: MAGLQEGCKRPQSRARSDVFGPF*PSLRDL
Trigger: CAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGAC...GTCGGACCTGGCCCTGCTCTGTGGTCTCTTGCATCCCTCCTGCAGGCCAGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp ATGGAGAGCCTTTTCTGCTGGATCTCAGAGTACTCCTTTCGCTTCTaGAGCCGCAGCGCCTCCCGCTCCTCCGACGTGGACTCGTGGCTG +
Preference number: 5 (lower is better)
Translates to: MESLFCWISEYSFRF*SRSASRSSDVDSWL
Trigger: CAGCCACGAGTCCACGTCGGAGGAGCGGGAGGCGCTGCGGCTGCAGAAGCGAAAGGAGTACTCTGAGATCCAGCAGAAAAGGCTCTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 90 bp CGGAGAACGAGCTCCCCGTTCATGTGCATGGCCAGGTTTCCGAAGTaGAGGAGCATCTGGTCCGTGGCCAGCTGCTGCTCGATGACGTCA +
Preference number: 5 (lower is better)
Translates to: RRTSSPFMCMARFPK*RSIWSVASCCSMTS
Trigger: TGACGTCATCGAGCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCTCGTTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 90 bp AAGTGGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACGACCAGCTaGCCGCTGGTGCAGGCCTCGTCGCTGAAGAAAAGGCGGAGGGAG +
Preference number: 5 (lower is better)
Translates to: KWKTLYWLSRLATTS*PLVQASSLKKRRRE
Trigger: CTCCCTCCGCCTTTTCTTCAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp CAAAGCACCAGAAGGTGTCTGACTCATCCAGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACATCCCTTGGGAATAGCCGACGGCAG +
Preference number: 5 (lower is better)
Translates to: QSTRRCLTHPGPRPR*APPGPTSLGNSRRQ
Trigger: CTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCCTGGATGAGTCAGACACCTTCTGGTGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CCA 90 bp GCAAACTCCTCGCCTTCCGGAGAACGAGCTCCCCGTTCATGTGCATaGCCAGGTTTCCGAAGTGCAGGAGCATCTGGTCCGTGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: ANSSPSGERAPRSCA*PGFRSAGASGPWPA
Trigger: AGCTGGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCTCGTTCTCCGGAAGGCGAGGAGTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGAGCTCATTCAGGTGGTaGAGCCAGGCGGAGACGCCG +
Preference number: 5 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKSSFRW*SQAETP
Trigger: CGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCT...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAGCTCATTCAGGTGGTaGAGCCAGGCGGAGACGCCG +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLSSFRW*SQAETP
Trigger: CGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CAGCTCATGGCTTCCGAGGTCCTGGCTGGTCCGAGAGGTGCAGACCTCACTGGGAGACCTCCCCGCGGATaGACACATCAATACCGCCAA +
Preference number: 5 (lower is better)
Translates to: QLMASEVLAGPRGADLTGRPPRG*THQYRQ
Trigger: TTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCT...CCCAGTGAGGTCTGCACCTCTCGGACCAGCCAGGACCTCGGAAGCCATGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTCGGGGAACTCCCGCTaGAAGCACAGAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LIPEPASSSCPDALPTPASGNSR*KHRRSQ
Trigger: CTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCGA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGACGTCCTGCGGCGTCTTaGGGCCCTTCTTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGRPAAS*GPSCLP
Trigger: GGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACG...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAGCCGGAAGCATCGTaGGGGCCGTGGCTAGCAGAG +
Preference number: 5 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGEPEAS*GPWLAE
Trigger: CTCTGCTAGCCACGGCCCCAACGATGCTTCCGGCTC...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCTTGCCTGGGGCCCCTaGTATCTCTGGCTCATGGCC +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLLAWGP*YLWLMA
Trigger: GGCCATGAGCCAGAGATACAAGGGGCCCCAGGCAAG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp TACAGCAAACTCCTCGCCTTCCGGAGAACGAGCTCCCCGTTCATGTaGATGGCCAGGTTTCCGAAGTGCAGGAGCATCTGGTCCGTGGCC +
Preference number: 5 (lower is better)
Translates to: YSKLLAFRRTSSPFM*MARFPKCRSIWSVA
Trigger: GGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCTCGTTCTCCGGAAGGCGAGGAGTTTGCTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 90 bp GGGGCGACCTGGTCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTaGTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GATWSLSCISVQYFH*WNTSDSLSRPPWWK
Trigger: CTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCAGGTCGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574241.6
CDS CCA 90 bp TGCTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAGTaGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACGACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: CWNTSDSLSRPPWWK*KTLYWLSRLATTSW
Trigger: CCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS-3UTR CAA 90 bp GTCTCTTCCCTGAGTGGCAGGTGTGGTCCCTGGGACTTCATAAACCATCCTCATGTCTGCAGGAGGCCGTaGCTGTCCGGGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: VSSLSGRCGPWDFINHPHVCRRP*LSGNRR
Trigger: CCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGAC...ATGAGGATGGTTTATGAAGTCCCAGGGACCACACCTGCCACTCAGGGAAGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTGCTGTGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGTCGGGGAACTCCCGCTaGAAGCACAGAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: LLWPRGELQVWCPPRLGKSGNSR*KHRRSQ
Trigger: CTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCGA...CTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCACAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCACTTGGTGCAGAGATGCAGCTGATTGGTCCGGGTCAGGTCTTGGGGAGCAGCGTCTTTGGGCCCTTCTaGCCTTCCCTCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: ALGAEMQLIGPGQVLGSSVFGPF*PSLRDL
Trigger: CAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGAC...GCTGCTCCCCAAGACCTGACCCGGACCAATCAGCTGCATCTCTGCACCAAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGGGCCTGGACAGGACCCCGCTGTGTTCTGCAGCCCTCGACGCAGTGGGTGAGTTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: WAWTGPRCVLQPSTQWVSFWEVC*AHSERT
Trigger: CGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAA...ACTCACCCACTGCGTCGAGGGCTGCAGAACACAGCGGGGTCCTGTCCAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGTCCAGATTAAGGGAGTaGTGGAGGGGCGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLSRLRE*WRGGAS
Trigger: AGAAGCCCCGCCCCTCCACAACTCCCTTAATCTGGA...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCCCTCAGGGCCGAGACTaGAGTCAGAACCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: LIPEPASSSCPDALPTPAPQGRD*SQNLLE
Trigger: CTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGG...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp ATTCTCAGCCTACTGCCACCCGACTGTGCAGAGCGGACAATAAAGTGGCAGGCCGAGCGAGGCTCCCAGTaGCTCAGAGTTAACCGGCCC +
Preference number: 5 (lower is better)
Translates to: ILSLLPPDCAERTIKWQAERGSQ*LRVNRP
Trigger: GGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTC...GGCCTGCCACTTTATTGTCCGCTCTGCACAGTCGGGTGGCAGTAGGCTGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp AGGGCGAGGAGAAGGTGTCTGAGTCTGAGTCAAAGGAGCTGTCTCTaGTCACGCCCTCGGCTGACAGTTCCAAAGAGCCATCCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: RARRRCLSLSQRSCL*SRPRLTVPKSHPPP
Trigger: GGGAGGAGGATGGCTCTTTGGAACTGTCAGCCGAGGGCGTGAGCAGAGACAGCTCCTTTGACTCAGACTCAGACACCTTCTCCTCGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp GCGACCTGCTGGTCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTaGTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: ATCWSLSCISVQYFH*WNTSDSLSRPPWWK
Trigger: CTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCAGCAGGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS CCA 90 bp TTCCACTGCTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTaGAAGTGGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACGACC +
Preference number: 5 (lower is better)
Translates to: FHCWNTSDSLSRPPW*KWKTLYWLSRLATT
Trigger: GGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 90 bp GCGACCTGGTCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTGCTaGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: ATWSLSCISVQYFHC*NTSDSLSRPPWWKW
Trigger: CCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCAGGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574241.6
CDS CCA 90 bp CTGGTGCAGGCCTCGTCGCTCCTTCGTTGCGTGTGGGTGGAACTCTaGGAGAACCCTCCAGGGAAACTCAGTAAACATCCGTCAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LVQASSLLRCVWVEL*ENPPGKLSKHPSVL
Trigger: CAGCACTGACGGATGTTTACTGAGTTTCCCTGGAGGGTTCTCCCAGAGTTCCACCCACACGCAACGAAGGAGCGACGAGGCCTGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571872.1
CDS-3UTR CAA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGCGAGGGCGGGGTGCCTaGCGAACGGGGGAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: QESTNFGQTISRLWVWPWRGRGA*RTGELS
Trigger: CGAGAGCTCCCCCGTTCGCAAGGCACCCCGCCCTCG...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTTCGGAGGACGGCAGCTaGGGGCGGCGGATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSSEDGS*GRRMEN
Trigger: GTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGETPSL*YMLSSG
Trigger: CCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTC...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GAAGGAATGCCTTCTACTAGGACCTTCCCAAGTGAGGGGAGCCCTGGACCTGTCATGGCCTTCCGCAGCTaGTACTCCTCCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: EGMPSTRTFPSEGSPGPVMAFRS*YSSSTW
Trigger: CCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGCCAT...GACAGGTCCAGGGCTCCCCTCACTTGGGAAGGTCCTAGTAGAAGGCATTCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CAA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCCTTCCCTCAGGGACTaGGGGGAAGGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: DLSILFLPPKHSGSKARGPSLRD*GEGIST
Trigger: GGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGATCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SPSVPLAVPWLACRRDARSSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGCCCAGCCACGTGACTaGCTGTGGCCAAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRAQPRD*LWPRGE
Trigger: CTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGGC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGGTCCGGGTCAGGTCTaGGGGAGCAGCAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRGPGQV*GSSRGE
Trigger: CTCACCCCTGCTGCTCCCCAAGACCTGACCCGGACC...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTGGCCTGAGGTGGGGTaGTGGTGGGCCTTGTCCCCC +
Preference number: 5 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVWPEVG*WWALSP
Trigger: GGGGGACAAGGCCCACCACAACCCCACCTCAGGCCA...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGATTGGGGGTTCAAGGTTaGCCCAGCCGGCCCCAAAGG +
Preference number: 5 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGLGVQG*PSRPQR
Trigger: CCTTTGGGGCCGGCTGGGCAAACCTTGAACCCCCAA...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp ACCTGCTGGTCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTGCTaGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAGTGG +
Preference number: 5 (lower is better)
Translates to: TCWSLSCISVQYFHC*NTSDSLSRPPWWKW
Trigger: CCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS-3UTR CAA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGGCGGCCCAGAGACATaGCCGGGCAAGTGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: DLSILFLPPKHSGSKARGGGPET*PGKCFH
Trigger: ATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGCC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFETPSL*YMLSSG
Trigger: CCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTC...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCGTCCGGACCACGTCTTaGTCCACAGTGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLVRTTS*STVNCT
Trigger: TGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGAC...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCACAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAQVRHP*GIADGR
Trigger: CCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTG...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCCTTCCCTCAGGGACTaGGGGGAAGGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDPSLRD*GEGIST
Trigger: GGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTCGTCCTGCGGCGTCTTaGGGCCCTTCTTGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSRPAAS*GPSCLP
Trigger: GGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACG...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCTCTGCTTTCCTCATaGCCTGGCGACGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGSLLSS*PGDAVW
Trigger: CCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGA...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGGGGTGGGAGCGAGGCTCCCAGTTGCTCAGAGTTAACCGGCCCTTTCCCGAGTTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: WGGSEAPSCSELTGPFPSFWEVC*AHSERT
Trigger: CGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAA...ACTCGGGAAAGGGCCGGTTAACTCTGAGCAACTGGGAGCCTCGCTCCCACCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TCTCCCTCCGTGCCTTTGGCTGTGCCATGGCTGGCCTGCAGGAGGGATGCAAGACCAGGTGTCCTTGTCTaGGTTGGTCAGCTAATACAC +
Preference number: 5 (lower is better)
Translates to: SPSVPLAVPWLACRRDARPGVLV*VGQLIH
Trigger: GTGTATTAGCTGACCAACCAAGACAAGGACACCTGG...TCTTGCATCCCTCCTGCAGGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCAAGAGGGAGAGTCTGTaGGGAAGACCTCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: LIPEPASSSCPDALPTPAKRESL*GRPHSH
Trigger: GTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCTT...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp TTAGCCCAAGGGGAGTCCTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LAQGESSFQSQHLHLVLMSPSVP*AVPWLA
Trigger: GGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA...CATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAGGACTCCCCTTGGGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGGTGTCCACCAAGGCTaGGAAAGGCACTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEGVHQG*ERHLLS
Trigger: AGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACAGCCCAGCCACGTGACTaGCTGTGGCCAAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTAQPRD*LWPRGE
Trigger: CTCTCCCCTTGGCCACAGCAAGTCACGTGGCTGGGC...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCCAGCTGCCGGACAAATaGGAAGGGACCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLQLPDK*EGTFLA
Trigger: TGCCAAGAAGGTCCCTTCCAATTTGTCCGGCAGCTG...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAAGGCCACGCAGAAATaGGGGGTTCAAGGTTTGCCC +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLKATQK*GVQGLP
Trigger: GGGCAAACCTTGAACCCCCAATTTCTGCGTGGCCTT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GCATTCACACACACATGCCTGGCGGGATCGCAGAGGATGGGTCTCGTGGCAGGAGATCTGGTTGTTCTCTaGAGATGCAGAGAGGAGGCC +
Preference number: 5 (lower is better)
Translates to: AFTHTCLAGSQRMGLVAGDLVVL*RCREEA
Trigger: GGCCTCCTCTCTGCATCTCAAGAGAACAACCAGATC...TCCTGCCACGAGACCCATCCTCTGCGATCCCGCCAGGCATGTGTGTGTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGAGGACTTCTTGGCCCTaGCCCATTGCCATACTCTAC +
Preference number: 5 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLRTSWP*PIAILY
Trigger: GTAGAGTATGGCAATGGGCAAGGGCCAAGAAGTCCT...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 90 bp TATTTCCACTGCTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTaGTGGAAGTGGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACG +
Preference number: 5 (lower is better)
Translates to: YFHCWNTSDSLSRPP*WKWKTLYWLSRLAT
Trigger: CGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTAGGATGTCCTCATCTTaGGGGGTCAGGGTAGGCCGC +
Preference number: 5 (lower is better)
Translates to: VCLAHSERTRSQEEVCLARMSSS*GVRVGR
Trigger: GCGGCCTACCCTGACCCCCAAAGATGAGGACATCCT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATCGGAGGACGGCAGCTaGGGGCGGCGGATGGAGAAC +
Preference number: 5 (lower is better)
Translates to: YPLFARSGGGKARSLMTESEDGS*GRRMEN
Trigger: GTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCACCTCCCACTCCCACATGGACAAAGATTTCTTTAAACGGAGCCACCAGCCATAGCTCATTCAGGTGGTaGAGCCAGGCGGAGACGCCG +
Preference number: 5 (lower is better)
Translates to: APPTPTWTKISLNGATSHSSFRW*SQAETP
Trigger: CGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCT...ATGGCTGGTGGCTCCGTTTAAAGAAATCTTTGTCCATGTGGGAGTGGGAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCCCCGGAAGAACTGGTaGTTCCGATCTGTCCGGACC +
Preference number: 5 (lower is better)
Translates to: VCLAHSERTRSQEEVCLAPRKNW*FRSVRT
Trigger: GGTCCGGACAGATCGGAACAACCAGTTCTTCCGGGG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGTCGGGGAACTCCCGCTaGAAGCACAGAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GTFWEVCLAHSERTRSQESGNSR*KHRRSQ
Trigger: CTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCGA...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp ATGAAGCCTCTCAGACCGTCCATGCCGTGCTTCCCTTCGTTAATGCAGATCGTCTCGGGGAACTCCCGCTaGAAGCACAGAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: MKPLRPSMPCFPSLMQIVSGNSR*KHRRSQ
Trigger: CTGGCTCCTTCTGTGCTTCAAGCGGGAGTTCCCCGA...GACGATCTGCATTAACGAAGGGAAGCACGGCATGGACGGTCTGAGAGGCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS-3UTR CAA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACACCTTCCCTCAGGGACTaGGGGGAAGGCATCTCCACC +
Preference number: 5 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTPSLRD*GEGIST
Trigger: GGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGG...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGGTGTCCACCAAGGCTaGGAAAGGCACTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: GRQTWELGSTCWTTWVHGGVHQG*ERHLLS
Trigger: AGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACC...TCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGGTCCGGGTCAGGTCTaGGGGAGCAGCAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHGPGQV*GSSRGE
Trigger: CTCACCCCTGCTGCTCCCCAAGACCTGACCCGGACC...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGTCGCTCTCACGTCCGACCACCTGAGAAGCTGACTTACATATCTGAGTTCACATCGAGCCTGACCACGTaGCCTCTTGGGTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GRSHVRPPEKLTYISEFTSSLTT*PLGCQH
Trigger: GTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGA...TGTGAACTCAGATATGTAAGTCAGCTTCTCAGGTGGTCGGACGTGAGAGCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCGAGCCTGACCACGTaGCCTCTTGGGTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVSSLTT*PLGCQH
Trigger: GTGCTGGCACCCAAGAGGCAACGTGGTCAGGCTCGA...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTCCTCAGGGCCGAGACTaGAGTCAGAACCTTCTGGAG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSPQGRD*SQNLLE
Trigger: CTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGG...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GAGGCGGTGACATCAGGGGCCCCTGAGCCACCAGGTTCCTCCATCTTCATGTGGTGGGTGACTACACAGTaGTCATTTACGGGGGAAGTA +
Preference number: 5 (lower is better)
Translates to: EAVTSGAPEPPGSSIFMWWVTTQ*SFTGEV
Trigger: TACTTCCCCCGTAAATGACAACTGTGTAGTCACCCA...CCACATGAAGATGGAGGAACCTGGTGGCTCAGGGGCCCCTGATGTCACCGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAGCACTTCGTCTAAATaGCATGGCACACACCCCAGG +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLSTSSK*HGTHPR
Trigger: CCTGGGGTGTGTGCCATGCAATTTAGACGAAGTGCT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGCTTGGCCCTTGCCCATaGCCATACTCTACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSELGPCP*PYSTVR
Trigger: TCTGACAGTAGAGTATGGCAATGGGCAAGGGCCAAG...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS TCA 90 bp GTGGCTGTAATAGCGCAGCAGGAAGGGCCAGACCTCCCCGCGGATTaGCACATCAATACCGCCAAAGAAAATGGCCTTCCGCAGCTTGTA +
Preference number: 5 (lower is better)
Translates to: VAVIAQQEGPDLPAD*HINTAKENGLPQLV
Trigger: TACAAGCTGCGGAAGGCCATTTTCTTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCTGGCCCTTCCTGCTGCGCTATTACAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000574427.1
CDS TCA 90 bp CTCGCGCAGGTACAGCAGTTGTTTCTCCATGTCCTCGTCCCGGGGTaGGCTGACGAAGATCGTGTTCTGCATCAAACCCACAAAGCACCA +
Preference number: 5 (lower is better)
Translates to: LAQVQQLFLHVLVPG*ADEDRVLHQTHKAP
Trigger: TGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAAACAACTGCTGTACCTGCGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000576768.5
CDS GCA 90 bp TGGTTGTTCCGATCTGTCCGGACCACGTCTTTGTCCACAGTGAACTaGACATTACGCCAGAACGCTCTGTGCTCCTCGGGAGTCATGGAG +
Preference number: 5 (lower is better)
Translates to: WLFRSVRTTSLSTVN*TLRQNALCSSGVME
Trigger: CTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGACAGATCGGAACAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS-3UTR CAA 90 bp GAACTTGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAATGGCCTTCCGCAGCTaGTACTCCTCCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: ELGSTCWTTWVHGEKRSRMAFRS*YSSSTW
Trigger: CCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGCCAT...TCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CAA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTTCTCTGCTTTCCTCATaGCCTGGCGACGCTGTCTGG +
Preference number: 5 (lower is better)
Translates to: VALVKASHFGDLHVPLFVSLLSS*PGDAVW
Trigger: CCAGACAGCGTCGCCAGGCAATGAGGAAAGCAGAGA...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGGAAGTGTGTCTGGCTaGCAAAGATGTCCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: VALVKASHFGDLHVPLFVGSVSG*QRCPWA
Trigger: GGCCCAGGGACATCTTTGCAAGCCAGACACACTTCC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TGGCCAAGGGGAGAGCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTCCAGGTGTCCTTGTCTaGGTTGGTCAGCTAATACAC +
Preference number: 5 (lower is better)
Translates to: WPRGELQVWCPPRLGKALPGVLV*VGQLIH
Trigger: GTGTATTAGCTGACCAACCAAGACAAGGACACCTGG...AAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGCTCTCCCCTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCAAGAGGGAGAGTCTGTaGGGAAGACCTCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGKRESL*GRPHSH
Trigger: GTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCTT...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTCTGAGGAACACTGCTTaGAAGTGGCATGGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: CVCVCVCVCAFSQGTSPPLRNTA*KWHGPA
Trigger: TGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAG...AGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATTCTCCCTCCGTGCCTTaGGCTGTGCCATGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNSPSVP*AVPWLA
Trigger: GGCCAGCCATGGCACAGCCAAAGGCACGGAGGGAGA...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAAGCCTGTGCGGCTGGTaGAGTGTAAACGCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: PEGRDGGFQEGFGLLAQGSLCGW*SVNAES
Trigger: TGACTCAGCGTTTACACTCAACCAGCCGCACAGGCT...TCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGAGAGAGCCCTGCATCTaGCCTGGGGCCCCTTGTATC +
Preference number: 5 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVREPCI*PGAPCI
Trigger: GATACAAGGGGCCCCAGGCAAGATGCAGGGCTCTCT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CTCATTCCAGAGCCAGCATCTTCATCTTGTCCTGATGCCCTGCCCACCCCCGCCTTTGTTGAGGGGGTTTaGAAGCAGCTTCTGCGTCAT +
Preference number: 5 (lower is better)
Translates to: LIPEPASSSCPDALPTPAFVEGV*KQLLRH
Trigger: ATGACGCAGAAGCTGCTTCAAAACCCCCTCAACAAA...GGCGGGGGTGGGCAGGGCATCAGGACAAGATGAAGATGCTGGCTCTGGAATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS TCA 90 bp AGAACTGGTTGTTCCGATCTGTCCGGACCACGTCTTTGTCCACAGTaGACTGCACATTACGCCAGAACGCTCTGTGCTCCTCGGGAGTCA +
Preference number: 5 (lower is better)
Translates to: RTGCSDLSGPRLCPQ*TAHYARTLCAPRES
Trigger: TGACTCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGACAGATCGGAACAACCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS TCA 90 bp GCAGGTACAGCAGTTGTTTCTCCATGTCCTCGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCATCAAACCCACAAAGCACCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AGTAVVSPCPRPGVS*RRSCSASNPQSTRR
Trigger: CCTTCTGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAAACAACTGCTGTACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000576768.5
CDS GCA 90 bp TTCTCCATGTCCTCGTCCCGGGGTGAGCTGACGAAGATCGTGTTCTaGATCAAACCCACAAAGCACCAGAAGGTGTCTGACTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: FSMSSSRGELTKIVF*IKPTKHQKVSDSSR
Trigger: CCTGGATGAGTCAGACACCTTCTGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000576768.5
CDS-3UTR CAA 90 bp GCAGAGCTGCACCACGCATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCTGGAAGTGGAAAACCTaGTACTGGCTCTCTCGGCTG +
Preference number: 5 (lower is better)
Translates to: AELHHASTFKYAHTRTPAWKWKT*YWLSRL
Trigger: CAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCA...GGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATGCGTGGTGCAGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACAGACCTCCCCGCGGATaGACACATCAATACCGCCAA +
Preference number: 5 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDRPPRG*THQYRQ
Trigger: TTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCT...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000340848.11
CDS-3UTR CAA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTCCCCGGAAGAACTGGTaGTTCCGATCTGTCCGGACC +
Preference number: 5 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIPRKNW*FRSVRT
Trigger: GGTCCGGACAGATCGGAACAACCAGTTCTTCCGGGG...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGG +
Preference number: 5 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNQVRHP*GIADGR
Trigger: CCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTGGGGAAGGAGTGCTCCAAAGCAGGCATTATTAGGACACAGACTCTCCAGAGTGTCTTTGGGCCCTTCTaGCCTTCCCTCAGGGACTTG +
Preference number: 5 (lower is better)
Translates to: VGKECSKAGIIRTQTLQSVFGPF*PSLRDL
Trigger: CAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGAC...ACTCTGGAGAGTCTGTGTCCTAATAATGCCTGCTTTGGAGCACTCCTTCCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp AGGTGCGGTGGCTGCGCGTTCCACTGCAGCGTTTCAGGAGCTGACTTTCCTCTGAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 5 (lower is better)
Translates to: RCGGCAFHCSVSGADFPLSWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...CAGAGGAAAGTCAGCTCCTGAAACGCTGCAGTGGAACGCGCAGCCACCGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGTGTGTGTGTGTGTGTGTGCGCATTTTCCCAGGGGACCTCTCCTCCTTCCTCTTCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: CVCVCVCAFSQGTSPPSSSSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...AGAGGAAGGAGGAGAGGTCCCCTGGGAAAATGCGCACACACACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: DLSILFLPPKHSGSKARGDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGCTGAGGAACACTGCTTaGAAGTGGCATGGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GTFWEVCLAHSERTRSQELRNTA*KWHGPA
Trigger: TGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAG...CTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CAAAAGGCTCTTAGGCAGACAGACCTGGGAACTTGGAAGTACCTGCTGGACGACCTGAGGAACACTGCTTaGAAGTGGCATGGCCCAGCA +
Preference number: 5 (lower is better)
Translates to: QKALRQTDLGTWKYLLDDLRNTA*KWHGPA
Trigger: TGCTGGGCCATGCCACTTCAAAGCAGTGTTCCTCAG...GTCGTCCAGCAGGTACTTCCAAGTTCCCAGGTCTGTCTGCCTAAGAGCCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGGGTGTCCACCAAGGCTaGGAAAGGCACTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRGVHQG*ERHLLS
Trigger: AGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACC...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATAGAGCCTGCCGTGCTTaGACCCAGCAAGTCCCACCG +
Preference number: 5 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNRACRA*TQQVPP
Trigger: CGGTGGGACTTGCTGGGTCAAAGCACGGCAGGCTCT...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATGCCACGGGGCCCTGTTaGCCCAGCACAGAGCCTGCC +
Preference number: 5 (lower is better)
Translates to: KWKSLTISRCPCLGWSANATGPC*PSTEPA
Trigger: GGCAGGCTCTGTGCTGGGCAAACAGGGCCCCGTGGC...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTCACGGTTCCAAGGGCTaGGTAGGGCAGCCTGAATTT +
Preference number: 5 (lower is better)
Translates to: VALVKASHFGDLHVPLFVHGSKG*VGQPEF
Trigger: AAATTCAGGCTGCCCTACCAAGCCCTTGGAACCGTG...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCTTGGAAGGGACCTTCTaGGCAGGACAGGTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCLEGTF*AGQVQL
Trigger: CAACTGGACCTGTCCTGCCAAGAAGGTCCCTTCCAA...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 90 bp ACGTCTTTGTCCACAGTGAACTGCACATTACGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAGAGCCTTTTCTGCTGGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: TSLSTVNCTLRQNAL*SSGVMESLFCWISE
Trigger: CTCTGAGATCCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS-3UTR CAA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCCTCTGGATGCGAGAGTaGGGGACCCATGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPLWMRE*GTHARM
Trigger: CATCCTGGCATGGGTCCCCAACTCTCGCATCCAGAG...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCCCCCGGAAGAACTGGTaGTTCCGATCTGTCCGGACC +
Preference number: 5 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPPRKNW*FRSVRT
Trigger: GGTCCGGACAGATCGGAACAACCAGTTCTTCCGGGG...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
53% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCTGCAGGTGTGGTGTCCACCAAGGCTTGGAAAGGCACTTGCTGTCTCTCCCTCAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 5 (lower is better)
Translates to: AAGVVSTKAWKGTCCLSLSWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...GAGGGAGAGACAGCAAGTGCCTTTCCAAGCCTTGGTGGACACCACACCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCTCACTCCGAGGGACAAAGCAGATCATaGTCAGAGGATCTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ASQLWLGTFWEVCLAHSEGQSRS*SEDLAN
Trigger: GTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCC...CTCGGAGTGAGCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTGGCCTTGGTGAAGGCTTCCCACTTTGGTGACTTGCATGTGCCCCTCTTTGTTGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: VALVKASHFGDLHVPLFVDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGAAGCCTTCACCAAGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCTGATTATCCCCTATTaGCACGTTCTGGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VCLAHSERTRSQEEVCLALIIPY*HVLAVG
Trigger: TCCCACCGCCAGAACGTGCAAATAGGGGATAATCAG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp AGCACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGCTGATTATCCCCTATTaGCACGTTCTGGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: STSRVFLPRRTRWRISGGLIIPY*HVLAVG
Trigger: TCCCACCGCCAGAACGTGCAAATAGGGGATAATCAG...CCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAGGCACCTATGTTCTCTaGCCCGGCGTGGGTGACTAC +
Preference number: 5 (lower is better)
Translates to: YPLFARSGGGKARSLMTEGTYVL*PGVGDY
Trigger: GTAGTCACCCACGCCGGGCAAGAGAACATAGGTGCC...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp AGTCCTCAGGGCCGAGACTTGAGTCAGAACCTTCTGGAGCAGTACGCATTTCCCTCCCACTTTGGTGACTaGCATGTGCCCCTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: SPQGRDLSQNLLEQYAFPSHFGD*HVPLFV
Trigger: AACAAAGAGGGGCACATGCAAGTCACCAAAGTGGGA...GGGAAATGCGTACTGCTCCAGAAGGTTCTGACTCAAGTCTCGGCCCTGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp ACATCAAGGGTTTTTCTCCCCAGAAGGACGCGATGGAGGATTTCAGGAGGGATTGTCCGGACCACGTCTTaGTCCACAGTGAACTGCACA +
Preference number: 5 (lower is better)
Translates to: TSRVFLPRRTRWRISGGIVRTTS*STVNCT
Trigger: TGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGAC...AATCCCTCCTGAAATCCTCCATCGCGTCCTTCTGGGGAGAAAAACCCTTGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp ACGCGATGGAGGATTTCAGGAGGGATTTGGTCTCCTCGCTCAAGGAGTGGCTTTTTTTGGGAAGTGTGTTaGGCTCACTCCGAGAGAACG +
Preference number: 5 (lower is better)
Translates to: TRWRISGGIWSPRSRSGFFWEVC*AHSERT
Trigger: CGTTCTCTCGGAGTGAGCCAAACACACTTCCCAAAA...AAAGCCACTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATCCTCCATCGCGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTTTCCATCGGCATCCCAGCTGTGGCTGGGGACGTTTTGGGAAGTGTGTTTGGCCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSIGIPAVAGDVLGSVFGLYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...GCCAAACACACTTCCCAAAACGTCCCCAGCCACAGCTGGGATGCCGATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAAGACCCCTCCAGATTAAGGGAGTaGTGGAGGGGCGGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: YLVELTLNNAKEPHVEDPSRLRE*WRGGAS
Trigger: AGAAGCCCCGCCCCTCCACAACTCCCTTAATCTGGA...GGGGTCTTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GACCTGTCTATCCTCTTCCTCCCTCCCAAACACAGCGGTTCAAAGGCACGAGGTCTGGAGGAAAGATGGTaGCATGACTTGACCTCTCTT +
Preference number: 5 (lower is better)
Translates to: DLSILFLPPKHSGSKARGLEERW*HDLTSL
Trigger: AAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAG...ACCTCGTGCCTTTGAACCGCTGTGTTTGGGAGGGAGGAAGAGGATAGACAGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTAACCCCAAAGGGCGCTaGATGAAGAGCTGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFNPKGR*MKSWSS
Trigger: GGAGCTCCAGCTCTTCATCAAGCGCCCTTTGGGGTT...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTGGGAAGTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGGGCCCTGGACCCCTTTaGCACCATCCTAATTTCAAC +
Preference number: 5 (lower is better)
Translates to: LGSVFGSLRENEVSRGSVGPGPL*HHPNFN
Trigger: GTTGAAATTAGGATGGTGCAAAAGGGGTCCAGGGCC...CACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACACTTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCAACACGTCAGACAGCTaGTCCAGGCCGCCGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVNTSDS*SRPPWW
Trigger: CCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTT...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 5 (lower is better)
Translates to: VCLAHSERTRSQEEVCLALYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTGTGTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTAGCTGGTTGCTGTATTaGGTGGAGTTGACCTTAAAC +
Preference number: 5 (lower is better)
Translates to: VCLAHSERTRSQEEVCLASWLLY*VELTLN
Trigger: GTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT...AGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CAGGAATCAACGAACTTTGGACAGACAATCAGTAGACTTTGGGTGTGGCCTTGGTCAAGCCCCAGCTGGTaGCTGTATTTGGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: QESTNFGQTISRLWVWPWSSPSW*LYLVEL
Trigger: CAACTCCACCAAATACAGCAACCAGCTGGGGCTTGA...CCAAGGCCACACCCAAAGTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAAGATTTCAGGAGGGATTaGGTCTCCTCGCTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: YPLFARSGGGKARSLMTEDFRRD*VSSLKE
Trigger: CTCCTTGAGCGAGGAGACCAAATCCCTCCTGAAATC...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTCTGATTATCCCCTATTaGCACGTTCTGGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFLIIPY*HVLAVG
Trigger: TCCCACCGCCAGAACGTGCAAATAGGGGATAATCAG...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp ACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGCACCCCTGGCTCTGCCCAAGAACAGATCACTaGCCATGGACATCAGTAATC +
Preference number: 5 (lower is better)
Translates to: TLYLKGQMAAGCLHPWLCPRTDH*PWTSVI
Trigger: GATTACTGATGTCCATGGCAAGTGATCTGTTCTTGG...GCAGAGCCAGGGGTGCAAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAAAACAACAGAAAACAGTaGGAAACCCCAAAGGGCGCT +
Preference number: 5 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQNNRKQ*ETPKGA
Trigger: AGCGCCCTTTGGGGTTTCCAACTGTTTTCTGTTGTT...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TACCCGGAAATGCGACACACTATACTTAAAAGGCCAGATGGCTGCAGGCTGTTTGGTGGCTTTGCTCATTaGAGGGTGTGCAGGGTACAT +
Preference number: 5 (lower is better)
Translates to: YPEMRHTILKRPDGCRLFGGFAH*RVCRVH
Trigger: ATGTACCCTGCACACCCTCAAATGAGCAAAGCCACC...AAACAGCCTGCAGCCATCTGGCCTTTTAAGTATAGTGTGTCGCATTTCCGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TGGAAGTACCTGCTGGACGACCTGGGTTCATGGAGAAAAGAGAAGCCGAGAAGGCTGTGTCTTTTTCTATaGTGCTTGTTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: WKYLLDDLGSWRKEKPRRLCLFL*CLFMAR
Trigger: CCTGGCCATGAACAAGCACAATAGAAAAAGACACAG...CCTTCTCGGCTTCTCTTTTCTCCATGAACCCAGGTCGTCCAGCAGGTACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCAGACCTTCCGCAGCTaGTACTCCTCCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVQTFRS*YSSSTW
Trigger: CCAGGTGGAGGAGGAGTACAAGCTGCGGAAGGTCTG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCCAGGTGTCCTTGTCTaGGTTGGTCAGCTAATACAC +
Preference number: 5 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNPGVLV*VGQLIH
Trigger: GTGTATTAGCTGACCAACCAAGACAAGGACACCTGG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LSMRTHVRQPITLSVILKETPSL*YMLSSG
Trigger: CCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp AGCTGGTTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACCATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 5 (lower is better)
Translates to: SWLLYLVELTLNNAKEPHHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...GTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAACCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GGCTGGGAGTTCTCACAGCATAGATCGCACACCCTTTTCTGTCCATCTCTAAATCTGGAGGAAAGATGGTaGCATGACTTGACCTCTCTT +
Preference number: 5 (lower is better)
Translates to: GWEFSQHRSHTLFCPSLNLEERW*HDLTSL
Trigger: AAGAGAGGTCAAGTCATGCAACCATCTTTCCTCCAG...ATTTAGAGATGGACAGAAAAGGGTGTGCGATCTATGCTGTGAGAACTCCCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000576768.5
CDS-3UTR CAA 90 bp GTTTGGCTCACTCCGAGAGAACGAGGTCTCAAGAGGAAGTGTGTCTGGCTTGCATACAGCGTGCATCTGTaGTCAGTACAGTTTTATTTG +
Preference number: 5 (lower is better)
Translates to: VWLTPRERGLKRKCVWLAYSVHL*SVQFYL
Trigger: CAAATAAAACTGTACTGACAACAGATGCACGCTGTA...TGCAAGCCAGACACACTTCCTCTTGAGACCTCGTTCTCTCGGAGTGAGCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCCGGGATTCCTTGAGTTaGGACAAAGGGTGTCCCGAC +
Preference number: 5 (lower is better)
Translates to: VPFVYQEDEMFKRINITSRDSLS*DKGCPD
Trigger: GTCGGGACACCCTTTGTCCAAACTCAAGGAATCCCG...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAGCGACCTGCTGGTCTTaGAGCTGCATCTCGGTGCAG +
Preference number: 5 (lower is better)
Translates to: LSMRTHVRQPITLSVILKATCWS*SCISVQ
Trigger: CTGCACCGAGATGCAGCTCAAAGACCAGCAGGTCGC...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp AAGTGGAAGAGTCTAACTATTTCCAGGTGTCCTTGTCTTGGTTGGTCAGCTAATAAATCCTGGGACATGTaGAAATCCTCCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: KWKSLTISRCPCLGWSANKSWDM*KSSRAA
Trigger: GGCTGCCCTGGAGGATTTCAACATGTCCCAGGATTT...ATTAGCTGACCAACCAAGACAAGGACACCTGGAAATAGTTAGACTCTTCCACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp GTTCCCTTCGTGTACCAGGAGGACGAAATGTTTAAACGGATAAACATTACAAGCAAGAGGGAGAGTCTGTaGGGAAGACCTCATTCCCAC +
Preference number: 5 (lower is better)
Translates to: VPFVYQEDEMFKRINITSKRESL*GRPHSH
Trigger: GTGGGAATGAGGTCTTCCCAACAGACTCTCCCTCTT...GCTTGTAATGTTTATCCGTTTAAACATTTCGTCCTCCTGGTACACGAAGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CTGCACCATGAGCATCCCCTGGGACTTAACAACCCACTGGCCCTAAACAAACAACTTTTTCTATTGTGCTaGTTCATGGCCAGGAATCAA +
Preference number: 5 (lower is better)
Translates to: LHHEHPLGLNNPLALNKQLFLLC*FMARNQ
Trigger: TTGATTCCTGGCCATGAACAAGCACAATAGAAAAAG...TTGTTTGTTTAGGGCCAGTGGGTTGTTAAGTCCCAGGGGATGCTCATGGTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp TTGCTGTATTTGGTGGAGTTGACCTTAAACAACGCCAAGGAACCTCACGTAGAACATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 5 (lower is better)
Translates to: LLYLVELTLNNAKEPHVEHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...TTCTACGTGAGGTTCCTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TATCCCCTATTTGCACGTTCTGGCGGTGGGAAGGCTAGAAGTCTAATGACTGAATCAATAAAATACTGTTaGTGTTTCCAGGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: YPLFARSGGGKARSLMTESIKYC*CFQALG
Trigger: CCCCAGTGCCTGGAAACACAAACAGTATTTTATTGA...TTCAGTCATTAGACTTCTAGCCTTCCCACCGCCAGAACGTGCAAATAGGGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS-3UTR CAA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCCTGTATTTGGTGGAGTaGACCTTAAACAACGCCAAG +
Preference number: 5 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVLYLVE*TLNNAK
Trigger: CTTGGCGTTGTTTAAGGTCAACTCCACCAAATACAG...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp CATCAACTTTTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCGGACAAAGCAGATCATaGTCAGAGGATCTTGCAAAC +
Preference number: 5 (lower is better)
Translates to: HQLLSMRTHVRQPITLSVGQSRS*SEDLAN
Trigger: GTTTGCAAGATCCTCTGACAATGATCTGCTTTGTCC...GACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAAAAGTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAACATTGTCAGAGGATCTaGCAAACACAAACACGCACG +
Preference number: 5 (lower is better)
Translates to: LSMRTHVRQPITLSVILKHCQRI*QTQTRT
Trigger: CGTGCGTGTTTGTGTTTGCAAGATCCTCTGACAATG...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS-3UTR CAA 90 bp TTAAGTATGCGCACACACGTACGCCAGCCAATAACATTAAGTGTCATTTTAAAAAGGAATCAACGAACTTaGGACAGACAATCAGTAGAC +
Preference number: 5 (lower is better)
Translates to: LSMRTHVRQPITLSVILKRNQRT*DRQSVD
Trigger: GTCTACTGATTGTCTGTCCAAAGTTCGTTGATTCCT...TTTTAAAATGACACTTAATGTTATTGGCTGGCGTACGTGTGTGCGCATACTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp GCGCACACCCGCTGCGGCTCGTCCCAGCGTGGGGTCTaGAGGAGGCCGTTGCTGTCCGGGAACCGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: AHTRCGSSQRGV*RRPLLSGNRRP
Trigger: CGGCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCGCAGCGGGTGTGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS CCA 72 bp CTCCAGGGCGCACACCCGCTGCGGCTCGTCCCAGCGTaGGGTCTGCAGGAGGCCGTTGCTGTCCGGGAACCG +
Preference number: 6 (lower is better)
Translates to: LQGAHPLRLVPA*GLQEAVAVREP
Trigger: CGGTTCCCGGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS CAA 72 bp TGCGGCTCGTCCCAGCGTGGGGTCTGCAGGAGGCCGTaGCTGTCCGGGAACCGCAGGCCGGCGTCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: CGSSQRGVCRRP*LSGNRRPASEL
Trigger: CAGCTCCGACGCCGGCCTGCGGTTCCCGGACAGCAACGGCCTCCTGCAGACCCCACGCTGGGACGAGCCGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS GCA 72 bp TCGGGCCGCGGCTCCCGCCCCTCCTCGGTGACATCCTaGGGACTGACCGTCGACAAGATCCCGGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SGRGSRPSSVTS*GLTVDKIPEGL
Trigger: CAGCCCCTCCGGGATCTTGTCGACGGTCAGTCCGCAGGATGTCACCGAGGAGGGGCGGGAGCCGCGGCCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp CGTAGGGACAGCTCTCCGAGCCGGGATGGTGGCCGGTaGACTCCACCGCGGGCATGGAGCCGCTGTCCCACA +
Preference number: 6 (lower is better)
Translates to: RRDSSPSRDGGR*TPPRAWSRCPT
Trigger: TGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCGGCTCGGAGAGCTGTCCCTACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp AGCCGGGATGGTGGCCGGTGCACTCCACCGCGGGCATaGAGCCGCTGTCCCACATGCCTGACCCGCACAGCT +
Preference number: 6 (lower is better)
Translates to: SRDGGRCTPPRA*SRCPTCLTRTA
Trigger: AGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCACCGGCCACCATCCCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS TCA 72 bp GGCGGGGTGCCTTGCGAACGGGGGAGCTCTCGGGTGTaGTGTAGCGCAGGGCCTCCTCGTCCTGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: GGVPCERGSSRV*CSAGPPRPASG
Trigger: TCCAGAGGCAGGACGAGGAGGCCCTGCGCTACATCACACCCGAGAGCTCCCCCGTTCGCAAGGCACCCCGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS TCA 72 bp GAAACACGGAGCCGCGGCTCTCGGCCAGCGCCGCGCTaGTGGGCGAGAGGCAGAAGGGCGAGGAGAAGGTGT +
Preference number: 6 (lower is better)
Translates to: ETRSRGSRPAPR*WARGRRARRRC
Trigger: ACACCTTCTCCTCGCCCTTCTGCCTCTCGCCCATCAGCGCGGCGCTGGCCGAGAGCCGCGGCTCCGTGTTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp ATGTGGCCCAGGTCCACGCGGAACACGCCGCAAATCTaGTCCAGGGCGCACACCCGCTGCGGCTCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: MWPRSTRNTPQI*SRAHTRCGSSQ
Trigger: CTGGGACGAGCCGCAGCGGGTGTGCGCCCTGGAGCAGATTTGCGGCGTGTTCCGCGTGGACCTGGGCCACAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310924.7
ENST00000571872.1
CDS GCA 72 bp GGCTCTCTCGGCTGGCAACGACCAGCTGGCCGCTGGTaGAGGCCTCGTCGCTCCTTCGTTGCGTGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: GSLGWQRPAGRW*RPRRSFVACGW
Trigger: CCACCCACACGCAACGAAGGAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571872.1
ENST00000574241.6
CDS CAA 90 bp CCGAGGCTTTGGAGGAGGCCCTGCGAAGGAGGCGGCCCAGAGACATaGCCGGGCAAGTGTTTCCATCCTCCGCATGCGTCGGCCCGGGCA +
Preference number: 6 (lower is better)
Translates to: PRLWRRPCEGGGPET*PGKCFHPPHASARA
Trigger: TGCCCGGGCCGACGCATGCGGAGGATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCCAAAGCCTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp GAGACGCCGAGCCTCTTGTACATGCTCTCCTCGGGGTaGGTCTCGGAGGACGGCAGCTTGGGGCGGCGGATG +
Preference number: 6 (lower is better)
Translates to: ETPSLLYMLSSG*VSEDGSLGRRM
Trigger: CATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 72 bp GGGGGCCCGACCTATCTGCGGAAGCCGAAGCCGTCCTaGGGCGTCTTTGGGCCCTTCTTGCCTTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: GGPTYLRKPKPS*GVFGPFLPSLR
Trigger: CCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp ACTGGCTCTCTCGGCTGGCAACGACCAGCTGGCCGCTaGTGCAGGCCTCGTCGCTCCTTCGTTGCGTGTGGG +
Preference number: 6 (lower is better)
Translates to: TGSLGWQRPAGR*CRPRRSFVACG
Trigger: CCCACACGCAACGAAGGAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571872.1
ENST00000574241.6
CDS CAA 72 bp CGCAGGGCCTCCTCGTCCTGCCTCTGGATGCGAGAGTaGGGGACCCATGCCAGGATGAGGGTGGCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: RRASSSCLWMRE*GTHARMRVAPS
Trigger: GCTGGGAGCCACCCTCATCCTGGCATGGGTCCCCAACTCTCGCATCCAGAGGCAGGACGAGGAGGCCCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp GGAGGAGGCCCTGCGAAGGAGGCGGCCCAGAGACATTaGCGGGCAAGTGTTTCCATCCTCCGCATGCGTCGG +
Preference number: 6 (lower is better)
Translates to: GGGPAKEAAQRH*RASVSILRMRR
Trigger: CCGACGCATGCGGAGGATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp CTTCCCTCAGGGACTTGGGGGAAGGCATCTCCACCGTaGCCCCGTAGGGACAGCTCTCCGAGCCGGGATGGT +
Preference number: 6 (lower is better)
Translates to: LPSGTWGKASPP*PRRDSSPSRDG
Trigger: ACCATCCCGGCTCGGAGAGCTGTCCCTACGGGGGCACGGTGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp CACCCCCAAGCCCTGCGCCAGCTTCTCCTCATCCTCTaGCGCAGGGCTGGCGAGCATGCGGTCTGGAACACT +
Preference number: 6 (lower is better)
Translates to: HPQALRQLLLIL*RRAGEHAVWNT
Trigger: AGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGAGGAGAAGCTGGCGCAGGGCTTGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CAA 90 bp ATGCGGTCTGGAACACTCTGGGCCACCACCAGGATGTCCTCATCTTaGGGGGTCAGGGTAGGCCGCAGCTCCGTCGGGGAGGGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: MRSGTLWATTRMSSS*GVRVGRSSVGEGWW
Trigger: CCACCAGCCCTCCCCGACGGAGCTGCGGCCTACCCTGACCCCCAAAGATGAGGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CAA 90 bp GGGGCCCGACCTATCTGCGGAAGCCGAAGCCGTCCTGCGGCGTCTTaGGGCCCTTCTTGCCTTCCCTCAGGGACTTGGGGGAAGGCATCT +
Preference number: 6 (lower is better)
Translates to: GARPICGSRSRPAAS*GPSCLPSGTWGKAS
Trigger: AGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCTTCCGCAGATAGGTCGGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS TCA 72 bp GCAGGAGCATCTGGTCCGTGGCCAGCTGCTGCTCGATaGCGTCATCCCCGTAGATGGCCACGATGGCCACGC +
Preference number: 6 (lower is better)
Translates to: AGASGPWPAAAR*RHPRRWPRWPR
Trigger: GCGTGGCCATCGTGGCCATCTACGGGGATGACGTCATCGAGCAGCAGCTGGCCACGGACCAGATGCTCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS TCA 72 bp CTCCACCGCGGGCATGGAGCCGCTGTCCCACATGCCTaGCCCGCACAGCTTACACAGATCGTGCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: LHRGHGAAVPHA*PAQLTQIVQAA
Trigger: TGCAGCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 72 bp TGCACTCCACCGCGGGCATGGAGCCGCTGTCCCACATaGCTGACCCGCACAGCTTACACAGATCGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: CTPPRAWSRCPT*LTRTAYTDRAG
Trigger: GCCTGCACGATCTGTGTAAGCTGTGCGGGTCAGGCATGTGGGACAGCGGCTCCATGCCCGCGGTGGAGTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 72 bp AGGACGGCAGCTTGGGGCGGCGGATGGAGAACTGCATaGATGTCTTATCGGGGGCGACCTGCTGGACGGGAG +
Preference number: 6 (lower is better)
Translates to: RTAAWGGGWRTA*MSYRGRPAGRE
Trigger: CTCCCGTCCAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573782.5
ENST00000574427.1
CDS GCA 72 bp TCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGCTGGACG +
Preference number: 6 (lower is better)
Translates to: SEDGSLGRRMEN*MHVLSGATCWT
Trigger: CGTCCAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000573782.5
ENST00000574427.1
CDS CCA 72 bp GGCGCAGGGCTGGCGAGCATGCGGTCTGGAACACTCTaGGCCACCACCAGGATGTCCTCATCTTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: GAGLASMRSGTL*ATTRMSSSLGV
Trigger: GACCCCCAAAGATGAGGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 72 bp ACCTTGTACTGGCTCTCTCGGCTGGCAACGACCAGCTaGCCGCTGGTGCAGGCCTCGTCGCTCCTTCGTTGC +
Preference number: 6 (lower is better)
Translates to: TLYWLSRLATTS*PLVQASSLLRC
Trigger: GCAACGAAGGAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571872.1
ENST00000574241.6
CDS CAA 72 bp TGGAGGAGGCCCTGCGAAGGAGGCGGCCCAGAGACATaGCCGGGCAAGTGTTTCCATCCTCCGCATGCGTCG +
Preference number: 6 (lower is better)
Translates to: WRRPCEGGGPET*PGKCFHPPHAS
Trigger: CGACGCATGCGGAGGATGGAAACACTTGCCCGGCAATGTCTCTGGGCCGCCTCCTTCGCAGGGCCTCCTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CAA 90 bp CCCAGCTCATTCAGGTGGTTGAGCCAGGCGGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGGTGCGTCTCGGAGGACGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PSSFRWLSQAETPSL*YMLSSGCVSEDGSL
Trigger: CAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 72 bp TCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: SEDGSLGRRMEN*MHVLSGATCWS
Trigger: AGACCAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp AGCCGAAGCCGTCCTGCGGCGTCTTTGGGCCCTTCTTaGCTTCCCTCAGGGACTTGGGGGAAGGCATCTCCA +
Preference number: 6 (lower is better)
Translates to: SRSRPAASLGPS*LPSGTWGKASP
Trigger: TGGAGATGCCTTCCCCCAAGTCCCTGAGGGAAGGCAAGAAGGGCCCAAAGACGCCGCAGGACGGCTTCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp CTCATCCTCTGGCGCAGGGCTGGCGAGCATGCGGTCTaGAACACTCTGGGCCACCACCAGGATGTCCTCATC +
Preference number: 6 (lower is better)
Translates to: LILWRRAGEHAV*NTLGHHQDVLI
Trigger: GATGAGGACATCCTGGTGGTGGCCCAGAGTGTTCCAGACCGCATGCTCGCCAGCCCTGCGCCAGAGGATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 72 bp TCCAGGCCGCCGTGGTGGAAGTGGAAAACCTTGTACTaGCTCTCTCGGCTGGCAACGACCAGCTGGCCGCTG +
Preference number: 6 (lower is better)
Translates to: SRPPWWKWKTLY*LSRLATTSWPL
Trigger: CAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 72 bp CCGCTGGTGCAGGCCTCGTCGCTCCTTCGTTGCGTGTaGGTGGAACTCTGGGAGAACCCTCCAGGGAAACTC +
Preference number: 6 (lower is better)
Translates to: PLVQASSLLRCV*VELWENPPGKL
Trigger: GAGTTTCCCTGGAGGGTTCTCCCAGAGTTCCACCCACACGCAACGAAGGAGCGACGAGGCCTGCACCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571872.1
CDS CAA 72 bp TTCAGGTGGTTGAGCCAGGCGGAGACGCCGAGCCTCTaGTACATGCTCTCCTCGGGGTGCGTCTCGGAGGAC +
Preference number: 6 (lower is better)
Translates to: FRWLSQAETPSL*YMLSSGCVSED
Trigger: GTCCTCCGAGACGCACCCCGAGGAGAGCATGTACAAGAGGCTCGGCGTCTCCGCCTGGCTCAACCACCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CAA 72 bp CTCGGCCAAGATGGGCGCCACCAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGGGTTGTACACGGCGTA +
Preference number: 6 (lower is better)
Translates to: LGQDGRHQVRHP*GIADGRVVHGV
Trigger: TACGCCGTGTACAACCCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTGGTGGCGCCCATCTTGGCCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CAA 90 bp ACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAGTGGAAAACCTaGTACTGGCTCTCTCGGCTGGCAACGACCAGCTGGCCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: TSDSLSRPPWWKWKT*YWLSRLATTSWPLV
Trigger: CACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CAA 90 bp ATCCAGGACCTCGGCCAAGATGGGCGCCACCAGGTCCGACATCCCTaGGGAATAGCCGACGGCAGGGTTGTACACGGCGTAGTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: IQDLGQDGRHQVRHP*GIADGRVVHGVVQQ
Trigger: CTGCTGAACTACGCCGTGTACAACCCTGCCGTCGGCTATTCCCAAGGGATGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCCTGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS TCA 72 bp ACTCCTCCTCCACCTGGCCCAGCTCATTCAGGTGGTTaGGCCAGGCGGAGACGCCGAGCCTCTTGTACATGC +
Preference number: 6 (lower is better)
Translates to: TPPPPGPAHSGG*ARRRRRASCTC
Trigger: GCATGTACAAGAGGCTCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGGCCAGGTGGAGGAGGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 72 bp AGCTCCCCGTTCATGTGCATGGCCAGGTTTCCGAAGTaGAGGAGCATCTGGTCCGTGGCCAGCTGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: SSPFMCMARFPK*RSIWSVASCCS
Trigger: CGAGCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 72 bp TCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGCTTCATC +
Preference number: 6 (lower is better)
Translates to: SEDGSLGRRMEN*MHVLSGATCFI
Trigger: GATGAAGCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000570373.5
ENST00000576768.5
CDS GCA 72 bp TCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTGGTCTTTG +
Preference number: 6 (lower is better)
Translates to: SEDGSLGRRMEN*MHVLSGATWSL
Trigger: CAAAGACCAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000574241.6
CDS CCA 72 bp ACCTTGTACTGGCTCTCTCGGCTGGCAACGACCAGCTaGCCGCTGGTGCAGGCCTCGTCGCTGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: TLYWLSRLATTS*PLVQASSLKKR
Trigger: CCTTTTCTTCAGCGACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CCA 72 bp GGTGGAAGTGGAAAACCTTGTACTGGCTCTCTCGGCTaGCAACGACCAGCTGGCCGCTGGTGCAGGCCTCGT +
Preference number: 6 (lower is better)
Translates to: GGSGKPCTGSLG*QRPAGRWCRPR
Trigger: ACGAGGCCTGCACCAGCGGCCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 72 bp TGCTCTCCTCGGGGTGCGTCTCGGAGGACGGCAGCTTaGGGCGGCGGATGGAGAACTGCATGCATGTCTTAT +
Preference number: 6 (lower is better)
Translates to: CSPRGASRRTAA*GGGWRTACMSY
Trigger: ATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CCA 72 bp CCGCATGCAAAGGCGGCGTGTGGTACCGGCACTCGGTaGCTTCAGACTCGCTTTCATCAGACATCAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PHAKAACGTGTR*LQTRFHQTSAP
Trigger: GGGGGCTGATGTCTGATGAAAGCGAGTCTGAAGCCACCGAGTGCCGGTACCACACGCCGCCTTTGCATGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572862.5
CDS CAA 72 bp ATGCTCTCCTCGGGGTGCGTCTCGGAGGACGGCAGCTaGGGGCGGCGGATGGAGAACTGCATGCATGTCTTA +
Preference number: 6 (lower is better)
Translates to: MLSSGCVSEDGS*GRRMENCMHVL
Trigger: TAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGAGACGCACCCCGAGGAGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 72 bp CTCGTCCTGCCTCTGGATGCGAGAGTTGGGGACCCATaGCAGGATGAGGGTGGCTCCCAGCATCTCATCCTT +
Preference number: 6 (lower is better)
Translates to: LVLPLDARVGDP*QDEGGSQHLIL
Trigger: AAGGATGAGATGCTGGGAGCCACCCTCATCCTGGCATGGGTCCCCAACTCTCGCATCCAGAGGCAGGACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS GCA 72 bp CTCCTCGCCTTCCGGAGAACGAGCTCCCCGTTCATGTaGATGGCCAGGTTTCCGAAGTGCAGGAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: LLAFRRTSSPFM*MARFPKCRSIW
Trigger: CCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCTCGTTCTCCGGAAGGCGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp TCGCCTTCCGGAGAACGAGCTCCCCGTTCATGTGCATaGCCAGGTTTCCGAAGTGCAGGAGCATCTGGTCCG +
Preference number: 6 (lower is better)
Translates to: SPSGERAPRSCA*PGFRSAGASGP
Trigger: CGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACATGAACGGGGAGCTCGTTCTCCGGAAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CAA 72 bp AGCTTGTCCAGGCCGCCGTGGTGGAAGTGGAAAACCTaGTACTGGCTCTCTCGGCTGGCAACGACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SLSRPPWWKWKT*YWLSRLATTSW
Trigger: CCAGCTGGTCGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CAA 72 bp TACTCCTCCTCCACCTGGCCCAGCTCATTCAGGTGGTaGAGCCAGGCGGAGACGCCGAGCCTCTTGTACATG +
Preference number: 6 (lower is better)
Translates to: YSSSTWPSSFRW*SQAETPSLLYM
Trigger: CATGTACAAGAGGCTCGGCGTCTCCGCCTGGCTCAACCACCTGAATGAGCTGGGCCAGGTGGAGGAGGAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS TCA 72 bp CGTCATCCCCGTAGATGGCCACGATGGCCACGCAGATaGAAAGGTGGAAGTAGTCCGTCTGGTAGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: RHPRRWPRWPRR*KGGSSPSGSGP
Trigger: GGGCCCACTACCAGACGGACTACTTCCACCTTTTCATCTGCGTGGCCATCGTGGCCATCTACGGGGATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS GCA 72 bp TCGGAGGACGGCAGCTTGGGGCGGCGGATGGAGAACTaGATGCATGTCTTATCGGGGGCGACCTTCATCTTA +
Preference number: 6 (lower is better)
Translates to: SEDGSLGRRMEN*MHVLSGATFIL
Trigger: TAAGATGAAGGTCGCCCCCGATAAGACATGCATGCAGTTCTCCATCCGCCGCCCCAAGCTGCCGTCCTCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340848.11
ENST00000572862.5
CDS CCA 72 bp ACGTCAGACAGCTTGTCCAGGCCGCCGTGGTGGAAGTaGAAAACCTTGTACTGGCTCTCTCGGCTGGCAACG +
Preference number: 6 (lower is better)
Translates to: TSDSLSRPPWWK*KTLYWLSRLAT
Trigger: CGTTGCCAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 72 bp AGAAGGTGTCTGACTCATCCAGGACCTCGGCCAAGATaGGCGCCACCAGGTCCGACATCCCTTGGGAATAGC +
Preference number: 6 (lower is better)
Translates to: RRCLTHPGPRPR*APPGPTSLGNS
Trigger: GCTATTCCCAAGGGATGTCGGACCTGGTGGCGCCCATCTTGGCCGAGGTCCTGGATGAGTCAGACACCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CCA 72 bp ATGTGCATGGCCAGGTTTCCGAAGTGCAGGAGCATCTaGTCCGTGGCCAGCTGCTGCTCGATGACGTCATCC +
Preference number: 6 (lower is better)
Translates to: MCMARFPKCRSI*SVASCCSMTSS
Trigger: GGATGACGTCATCGAGCAGCAGCTGGCCACGGACCAGATGCTCCTGCACTTCGGAAACCTGGCCATGCACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000576768.5
CDS CCA 72 bp TGGTGCAGGCCTCGTCGCTCCTTCGTTGCGTGTGGGTaGAACTCTGGGAGAACCCTCCAGGGAAACTCAGTA +
Preference number: 6 (lower is better)
Translates to: WCRPRRSFVACG*NSGRTLQGNSV
Trigger: TACTGAGTTTCCCTGGAGGGTTCTCCCAGAGTTCCACCCACACGCAACGAAGGAGCGACGAGGCCTGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571872.1
CDS CCA 72 bp TGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGGTaGAAGTGGAAAACCTTGTACTGGCTCTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: WNTSDSLSRPPW*KWKTLYWLSRL
Trigger: CAGCCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 72 bp TGCTGGAACACGTCAGACAGCTTGTCCAGGCCGCCGTaGTGGAAGTGGAAAACCTTGTACTGGCTCTCTCGG +
Preference number: 6 (lower is better)
Translates to: CWNTSDSLSRPP*WKWKTLYWLSR
Trigger: CCGAGAGAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CCA 72 bp GCCTCGTCGCTCCTTCGTTGCGTGTGGGTGGAACTCTaGGAGAACCCTCCAGGGAAACTCAGTAAACATCCG +
Preference number: 6 (lower is better)
Translates to: ASSLLRCVWVEL*ENPPGKLSKHP
Trigger: CGGATGTTTACTGAGTTTCCCTGGAGGGTTCTCCCAGAGTTCCACCCACACGCAACGAAGGAGCGACGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571872.1
CDS CAA 90 bp CGTGGCTGTAATAGCGCAGCAGGAAGGGCCAGACCTCCCCGCGGATaGACACATCAATACCGCCAAAGAAAATGGCCTTCCGCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: RGCNSAAGRARPPRG*THQYRQRKWPSAAC
Trigger: ACAAGCTGCGGAAGGCCATTTTCTTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCTGGCCCTTCCTGCTGCGCTATTACAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000574427.1
CDS TCA 72 bp ATAGCGCAGCAGGAAGGGCCAGACCTCCCCGCGGATTaGCACATCAATACCGCCAAAGAAAATGGCCTTCCG +
Preference number: 6 (lower is better)
Translates to: IAQQEGPDLPAD*HINTAKENGLP
Trigger: CGGAAGGCCATTTTCTTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCTGGCCCTTCCTGCTGCGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000574427.1
CDS GCA 72 bp TGGTCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTaGTGGAACACGTCAGACAGCTTGTCCAGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: WSLSCISVQYFH*WNTSDSLSRPP
Trigger: CGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS GCA 72 bp CGATCTGTCCGGACCACGTCTTTGTCCACAGTGAACTaGACATTACGCCAGAACGCTCTGTGCTCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: RSVRTTSLSTVN*TLRQNALCSSG
Trigger: TCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGACAGATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS CCA 72 bp TCTTTGAGCTGCATCTCGGTGCAGTATTTCCACTGCTaGAACACGTCAGACAGCTTGTCCAGGCCGCCGTGG +
Preference number: 6 (lower is better)
Translates to: SLSCISVQYFHC*NTSDSLSRPPW
Trigger: CCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCAGCTCAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CAA 90 bp TGCATCTCGGTGCAGTATTTCCACTGCTGGAACACGTCAGACAGCTaGTCCAGGCCGCCGTGGTGGAAGTGGAAAACCTTGTACTGGCTC +
Preference number: 6 (lower is better)
Translates to: CISVQYFHCWNTSDS*SRPPWWKWKTLYWL
Trigger: GAGCCAGTACAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCACCGAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS GCA 72 bp TCCACAGTGAACTGCACATTACGCCAGAACGCTCTGTaGTCCTCGGGAGTCATGGAGAGCCTTTTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: STVNCTLRQNAL*SSGVMESLFCW
Trigger: CCAGCAGAAAAGGCTCTCCATGACTCCCGAGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS GCA 72 bp TCCTCGTCCCGGGGTGAGCTGACGAAGATCGTGTTCTaGATCAAACCCACAAAGCACCAGAAGGTGTCTGAC +
Preference number: 6 (lower is better)
Translates to: SSSRGELTKIVF*IKPTKHQKVSD
Trigger: GTCAGACACCTTCTGGTGCTTTGTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000576768.5
CDS CAA 72 bp GTGCAGTATTTCCACTGCTGGAACACGTCAGACAGCTaGTCCAGGCCGCCGTGGTGGAAGTGGAAAACCTTG +
Preference number: 6 (lower is better)
Translates to: VQYFHCWNTSDS*SRPPWWKWKTL
Trigger: CAAGGTTTTCCACTTCCACCACGGCGGCCTGGACAAGCTGTCTGACGTGTTCCAGCAGTGGAAATACTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310924.7
ENST00000571872.1
ENST00000574241.6
CDS CAA 72 bp AATAGCGCAGCAGGAAGGGCCAGACCTCCCCGCGGATaGACACATCAATACCGCCAAAGAAAATGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: NSAAGRARPPRG*THQYRQRKWPS
Trigger: GGAAGGCCATTTTCTTTGGCGGTATTGATGTGTCAATCCGCGGGGAGGTCTGGCCCTTCCTGCTGCGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000574427.1
CDS TCA 72 bp TGTTCCGATCTGTCCGGACCACGTCTTTGTCCACAGTaGACTGCACATTACGCCAGAACGCTCTGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: CSDLSGPRLCPQ*TAHYARTLCAP
Trigger: AGGAGCACAGAGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGACAGATCGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5
CDS TCA 72 bp GCAGTTGTTTCTCCATGTCCTCGTCCCGGGGTGAGCTaGCGAAGATCGTGTTCTGCATCAAACCCACAAAGC +
Preference number: 6 (lower is better)
Translates to: AVVSPCPRPGVS*RRSCSASNPQS
Trigger: GCTTTGTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAAACAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000576768.5
CDS TCA 72 bp GTACAGCAGTTGTTTCTCCATGTCCTCGTCCCGGGGTaGGCTGACGAAGATCGTGTTCTGCATCAAACCCAC +
Preference number: 6 (lower is better)
Translates to: VQQLFLHVLVPG*ADEDRVLHQTH
Trigger: GTGGGTTTGATGCAGAACACGATCTTCGTCAGCTCACCCCGGGACGAGGACATGGAGAAACAACTGCTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000576768.5
CDS GCA 72 bp AGAAGGTGTCTGAGTCTGAGTCAAAGGAGCTGTCTCTaGTCACGCCCTCGGCTGACAGTTCCAAAGAGCCAT +
Preference number: 6 (lower is better)
Translates to: RRCLSLSQRSCL*SRPRLTVPKSH
Trigger: ATGGCTCTTTGGAACTGTCAGCCGAGGGCGTGAGCAGAGACAGCTCCTTTGACTCAGACTCAGACACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310924.7
CDS CAA 72 bp AAGAACTGGTTGTTCCGATCTGTCCGGACCACGTCTTaGTCCACAGTGAACTGCACATTACGCCAGAACGCT +
Preference number: 6 (lower is better)
Translates to: KNWLFRSVRTTS*STVNCTLRQNA
Trigger: AGCGTTCTGGCGTAATGTGCAGTTCACTGTGGACAAAGACGTGGTCCGGACAGATCGGAACAACCAGTTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000310924.7
ENST00000340848.11
ENST00000570373.5
ENST00000572862.5
ENST00000573782.5
ENST00000574241.6
ENST00000574427.1
ENST00000576768.5