RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D15 (Homo sapiens)

Ensembl gene IDs: ENSG00000121749

Ensembl transcript IDs: ENST00000319106.12, ENST00000460818.1, ENST00000462788.6, ENST00000468049.2, ENST00000472611.6, ENST00000474468.5, ENST00000479971.1, ENST00000482439.6, ENST00000483828.6, ENST00000485960.7, ENST00000491063.5, ENST00000498482.5, ENST00000546932.5, ENST00000548679.5, ENST00000549402.5, ENST00000550746.5

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGTCTTCACCAACGTCTGAATCTGGTGTTGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAGACTGCTTGTGGCAATTCCTTGCAT +
Preference number: 1 (lower is better)
Translates to: SSSPTSESGVVTSLP*SPRISQTACGNSLH
Trigger: ATGCAAGGAATTGCCACAAGCAGTCTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTACAACACCAGATTCAGACGTTGGTGAAGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 90 bp TGTAGGACAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTCACTGCCTTGAAGCCCAAGGATCTC +
Preference number: 1 (lower is better)
Translates to: CRTRSHDNIFVFTNV*IWCCNFTALKPKDL
Trigger: GAGATCCTTGGGCTTCAAGGCAGTGAAGTTACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTGTCCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 90 bp TCATTTCTGGCTCCACTGGCAGAGAGTGTAGGCAAGGCATTACTTTaGAATGCAGATGTAGGACAAGGAGTCATGACAACATTTTCGTCT +
Preference number: 1 (lower is better)
Translates to: SFLAPLAESVGKALL*NADVGQGVMTTFSS
Trigger: AGACGAAAATGTTGTCATGACTCCTTGTCCTACATCTGCATTTCAAAGTAATGCCTTGCCTACACTCTCTGCCAGTGGAGCCAGAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 90 bp TGTATTAACCATGTCCCATTCTGCTTCGTAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTCTTTTGGGGCCTGAGTCCATTCTAC +
Preference number: 1 (lower is better)
Translates to: CINHVPFCFVTVQMF*SSMTSFFWGLSPFY
Trigger: GTAGAATGGACTCAGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACGAAGCAGAATGGGACATGGTTAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR TCA 90 bp TCAATGTTCTTAGTCCATTCTTCCAGTGATACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCCAAATCAATTCTTGTGATGACTTCA +
Preference number: 1 (lower is better)
Translates to: SMFLVHSSSDTGSLL*TTGRSPKSILVMTS
Trigger: TGAAGTCATCACAAGAATTGATTTGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGACTAAGAACATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 90 bp CCCAAATCAATTCTTGTGATGACTTCAAATCCTGGTTCTTCTTGTTaGTTTATCTTTAGACCTGGAATAGCATCACTAAGAAAATCTGCC +
Preference number: 1 (lower is better)
Translates to: PKSILVMTSNPGSSC*FIFRPGIASLRKSA
Trigger: GGCAGATTTTCTTAGTGATGCTATTCCAGGTCTAAAGATAAATCAACAAGAAGAACCAGGATTTGAAGTCATCACAAGAATTGATTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCACCAGAAGGCGGAGGCTaGAGTGAGCCAGGACTGCGC +
Preference number: 2 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSPEGGG*SEPGLR
Trigger: GCGCAGTCCTGGCTCACTGCAGCCTCCGCCTTCTGG...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR TCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCAGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAG +
Preference number: 2 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAVTSLP*SPRISQ
Trigger: CTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTAC...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR TCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCC +
Preference number: 2 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVTGSLL*TTGRSP
Trigger: GGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGT...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATGCTTGCTTTCTCAATaGATGACTAAGTCCCCCTCT +
Preference number: 2 (lower is better)
Translates to: TSEDTGICVGLSFLAPLACLLSQ*MTKSPS
Trigger: AGAGGGGGACTTAGTCATGCATTGAGAAAGCAAGCA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CCA 90 bp CTGCAGACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTTTTCTCTTGTTCCTaGCTGATGGATTTCCACTGC +
Preference number: 2 (lower is better)
Translates to: LQTSEDTGICVGLSFLAPLFSCS*LMDFHC
Trigger: GCAGTGGAAATCCATCAGCCAGGAACAAGAGAAAAG...TGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CCA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCAGTAATCTCAGCACTTTaGGAGGCTGAAGCGAGTGGA +
Preference number: 2 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSVISAL*EAEASG
Trigger: TCCACTCGCTTCAGCCTCCCAAAGTGCTGAGATTAC...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR TCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTATCTGAAGGTGGTCGTTaGTGTGTAGAGGGATCGCTG +
Preference number: 2 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVSEGGR*CVEGSL
Trigger: CAGCGATCCCTCTACACATCAACGACCACCTTCAGA...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCACTTGTGGCAATTCCTTaGATTTTACCATCTGTAGAG +
Preference number: 2 (lower is better)
Translates to: TSEDTGICVGLSFLAPLALVAIP*ILPSVE
Trigger: CTCTACAGATGGTAAAATGCAAGGAATTGCCACAAG...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAGCAGTGAGCCAGGACTaGGCCACTGCACTCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEAVSQD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAGTCCTGGCTCACTGC...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR TCA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTCTCTTGTTCCTGGCTaGTGGATTTCCACTGCAGTT +
Preference number: 2 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGISLVPG*WISTAV
Trigger: AACTGCAGTGGAAATCCATCAGCCAGGAACAAGAGA...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR TCA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTCTGGACTCTGTGGACTaGTTTAAGACTTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVLDSVD*FKTSPG
Trigger: TCCAGGAGAAGTCTTAAATCAGTCCACAGAGTCCAG...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR CCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTGGGTTCTTTCCTCCTTaGTACTGTCCCAGGGAAAAT +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVGFFPP*YCPREN
Trigger: ATTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCC...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CCA 90 bp CTTCGTAACTGTTCAGATGTTCTGATCCTCGATGACCTCTTTCTTTTGGGGCCTAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 2 (lower is better)
Translates to: LRNCSDVLILDDLFLLGPSRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...AGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR-3UTR TCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAAGTCCATTCTTCCAGTaGTACCGGTTCTCTCCTTTG +
Preference number: 2 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVSPFFQ*YRFSPL
Trigger: CAAAGGAGAGAACCGGTATCACTGGAAGAATGGACT...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR TCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTAGTAAGGTACTCAGCTaGATTAGCTGGGTCTTCATG +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVSKVLS*ISWVFM
Trigger: CATGAAGACCCAGCTAATTCAGCTGAGTACCTTACT...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR TCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTC +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVVFTNV*IWCCNF
Trigger: GAAGTTACAACACCAGATTCAGACGTTGGTGAAGAC...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTAAGGATCTCACAGACTaGTTGTGGCAATTCCTTGCA +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVKDLTD*LWQFLA
Trigger: TGCAAGGAATTGCCACAAGCAGTCTGTGAGATCCTT...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR TCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTTGCTTTCTCAATGCATaGCTAAGTCCCCCTCTAAAT +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVCFLNA*LSPPLN
Trigger: ATTTAGAGGGGGACTTAGTCATGCATTGAGAAAGCA...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTCTCACAGACTGCTTGTaGCAATTCCTTGCATTTTAC +
Preference number: 2 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVLTDCL*QFLAFY
Trigger: GTAAAATGCAAGGAATTGCCACAAGCAGTCTGTGAG...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CCA 90 bp CTAATGCATCATCCAATGGTCTCCAGTCCACTATTACTTCGGCATCCTTTTCTAGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 2 (lower is better)
Translates to: LMHHPMVSSPLLLRHPFLEIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...TAGAAAAGGATGCCGAAGTAATAGTGGACTGGAGACCATTGGATGATGCATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR-3UTR TCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTACCTGGTTCTTCTTGTTaGTTTATCTTTAGACCTGGA +
Preference number: 2 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVPGSSC*FIFRPG
Trigger: TCCAGGTCTAAAGATAAATCAACAAGAAGAACCAGG...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp CTTCGTAACTGTTCAGATGTTCTGATCCTCGATGACCTCTTTCTTTTGGGGCCTATACCCTCTTTGTTTTaGTTGATTGATTTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: LRNCSDVLILDDLFLLGPIPSLF*LIDFRS
Trigger: AGACCTGAAATCAATCAAGCAAAACAAAGAGGGTAT...AGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR-3UTR GCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAAAATTGCTTCTGCCTTaGAGAGTATATCTTCCACAT +
Preference number: 2 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVKLLLP*RVYLPH
Trigger: ATGTGGAAGATATACTCTGCAAGGCAGAAGCAATTT...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTAAATCCTATCATAGTTaGCGTATAAGGGTCCTTTTT +
Preference number: 2 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLKSYHS*RIRVLF
Trigger: AAAAAGGACCCTTATACGGCAACTATGATAGGATTT...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR GCA 90 bp GATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACCAAATATACCCTCTTTGTTTTaGTTGATTGATTTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: DESVEQGERRHPLDRIPNIPSLF*LIDFRS
Trigger: AGACCTGAAATCAATCAAGCAAAACAAAGAGGGTAT...ATTTGGTATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
3UTR-3UTR TCA 90 bp CCACTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 2 (lower is better)
Translates to: PLLLRHPFLKHVIFLKSSGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...GCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR-3UTR GCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGTACTTGAAAAAGGGTTaGAACAAAGTGTCTCTTCCC +
Preference number: 2 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKYLKKG*NKVSLP
Trigger: GGGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTA...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR GCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCTCCAACTCATCCACTTaGAATATTTATCCAATTCCA +
Preference number: 2 (lower is better)
Translates to: CFTESNNCIFQGNTVPISSNSST*NIYPIP
Trigger: TGGAATTGGATAAATATTGCAAGTGGATGAGTTGGA...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR GCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATCTTCTCAGCTTAGAATaGTATAGAAAGCCTCCACAT +
Preference number: 2 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINLLSLE*YRKPPH
Trigger: ATGTGGAGGCTTTCTATAGCATTCTAAGCTGAGAAG...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAAAAGGCTGGAGATGCTaGGTTTTTGATCAGTTTATG +
Preference number: 2 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEKGWRC*VFDQFM
Trigger: CATAAACTGATCAAAAACTCAGCATCTCCAGCCTTT...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR CAA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATACCGGTTCTCTCCTTaGAACAACAGGGCGTTCCCC +
Preference number: 3 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAYRFSP*NNRAFP
Trigger: GGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 72 bp CCAACGTCTGAATCTGGTGTTGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAGACTGCTTGTGGCAAT +
Preference number: 3 (lower is better)
Translates to: PTSESGVVTSLP*SPRISQTACGN
Trigger: ATTGCCACAAGCAGTCTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTACAACACCAGATTCAGACGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTTGGGTTCTTTCCTCCTaGGTACTGTCCCAGGGAAAA +
Preference number: 3 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVWVLSS*VLSQGK
Trigger: TTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCCA...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCACGAATTTCTTTTCTCTaGTTCCTGGCTGATGGATTT +
Preference number: 3 (lower is better)
Translates to: TSEDTGICVGLSFLAPLARISFL*FLADGF
Trigger: AAATCCATCAGCCAGGAACAAGAGAAAAGAAATTCG...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 72 bp GCTCCACTGGCAGAGAGTGTAGGCAAGGCATTACTTTaGAATGCAGATGTAGGACAAGGAGTCATGACAACA +
Preference number: 3 (lower is better)
Translates to: APLAESVGKALL*NADVGQGVMTT
Trigger: TGTTGTCATGACTCCTTGTCCTACATCTGCATTTCAAAGTAATGCCTTGCCTACACTCTCTGCCAGTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 72 bp CATGTCCCATTCTGCTTCGTAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTCTTTTGGGGCCTGAGT +
Preference number: 3 (lower is better)
Translates to: HVPFCFVTVQMF*SSMTSFFWGLS
Trigger: ACTCAGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACGAAGCAGAATGGGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR-3UTR CAA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCAAAGAAATTTCCATGCTaGCTTTCTCAATGCATGACT +
Preference number: 3 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAKKFPC*LSQCMT
Trigger: AGTCATGCATTGAGAAAGCAAGCATGGAAATTTCTT...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp CTGCAGACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCAAAAATTCTGATGCATTaGGTCCATGTAAGAGGCAAA +
Preference number: 3 (lower is better)
Translates to: LQTSEDTGICVGLSFLAPKILMH*VHVRGK
Trigger: TTTGCCTCTTACATGGACCAAATGCATCAGAATTTT...TGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGTCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTTGTAACTTCACTGCCTaGAAGCCCAAGGATCTCACA +
Preference number: 3 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVCNFTA*KPKDLT
Trigger: TGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTACA...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGAGACAGGAGAATCGCTaGAACCCAGAAGGCGGAGGC +
Preference number: 3 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKRQENR*NPEGGG
Trigger: GCCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGTCT...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR TCA 72 bp TTAGTCCATTCTTCCAGTGATACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCCAAATCAATTCTTGTG +
Preference number: 3 (lower is better)
Translates to: LVHSSSDTGSLL*TTGRSPKSILV
Trigger: CACAAGAATTGATTTGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 72 bp AGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTCACTGCCTTGAAGCCC +
Preference number: 3 (lower is better)
Translates to: RSHDNIFVFTNV*IWCCNFTALKP
Trigger: GGGCTTCAAGGCAGTGAAGTTACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCCCATCTGTAGAGAAATaGCTTCTGCCTTGCAGAGTA +
Preference number: 3 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGIPSVEK*LLPCRV
Trigger: TACTCTGCAAGGCAGAAGCAATTTCTCTACAGATGG...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTGATCTCACAGACTGCTaGTGGCAATTCCTTGCATTT +
Preference number: 3 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVDLTDC*WQFLAF
Trigger: AAATGCAAGGAATTGCCACAAGCAGTCTGTGAGATC...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTAATGGCACAGAGTATTaGCTAACTGGACTCTGTGGA +
Preference number: 3 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVNGTEY*LTGLCG
Trigger: TCCACAGAGTCCAGTTAGCAAATACTCTGTGCCATT...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTGAAGAAGATGGAAATTaGTACATGGTAGTTCGGTCC +
Preference number: 3 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVEEDGN*YMVVRS
Trigger: GGACCGAACTACCATGTACAAATTTCCATCTTCTTC...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCGCTTGTGGCAATTCCTaGCATTTTACCATCTGTAGA +
Preference number: 3 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGIACGNS*HFTICR
Trigger: TCTACAGATGGTAAAATGCAAGGAATTGCCACAAGC...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR CCA 72 bp CCAAGTAAAGACGCCCAAGCTAAAATGATGTTCTCCTaGTACATATCTGCACGTAAGTCAGTTGAAGCTGTA +
Preference number: 3 (lower is better)
Translates to: PSKDAQAKMMFS*YISARKSVEAV
Trigger: TACAGCTTCAACTGACTTACGTGCAGATATGTACCAGGAGAACATCATTTTAGCTTGGGCGTCTTTACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR CAA 90 bp GATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACCAAATCAGCCCATACCCTCTTaGTTTTGCTTGATTGATTTC +
Preference number: 3 (lower is better)
Translates to: DESVEQGERRHPLDRIPNQPIPS*FCLIDF
Trigger: GAAATCAATCAAGCAAAACAAAGAGGGTATGGGCTG...ATTTGGTATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
3UTR TCA 72 bp AATCCACTGTCTAACAATCGAAGTAAGGTACTCAGCTaGATTAGCTGGGTCTTCATGCCTTGCATTTGTTCT +
Preference number: 3 (lower is better)
Translates to: NPLSNNRSKVLS*ISWVFMPCICS
Trigger: AGAACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACAGTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR TCA 72 bp GTTAAAATGCAGATTCCTGATCTGACTTCCAAAGACTaGTTCTGTAAGCCTGAAGTAGCACCTAGACATGTA +
Preference number: 3 (lower is better)
Translates to: VKMQIPDLTSKD*FCKPEVAPRHV
Trigger: TACATGTCTAGGTGCTACTTCAGGCTTACAGAATCAGTCTTTGGAAGTCAGATCAGGAATCTGCATTTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR-3UTR CAA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGGTACTTGAAAAAGGGTaGCAACAAAGTGTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKVLEKG*QQSVSS
Trigger: GGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTAC...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
3UTR GCA 72 bp ATAACCCAGAAGAAATTTCCATGCTTGCTTTCTCAATaGATGACTAAGTCCCCCTCTAAATATCATCTGCTT +
Preference number: 3 (lower is better)
Translates to: ITQKKFPCLLSQ*MTKSPSKYHLL
Trigger: AAGCAGATGATATTTAGAGGGGGACTTAGTCATGCATTGAGAAAGCAAGCATGGAAATTTCTTCTGGGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR CCA 72 bp CACGTAATATTCCTGAAATCAAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGTGAATATATACTCCTT +
Preference number: 3 (lower is better)
Translates to: HVIFLKSSRLGH*SFHKMSEYILL
Trigger: AAGGAGTATATATTCACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGGAATATTACGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR GCA 72 bp TGCATTTTACCATCTGTAGAGAAATTGCTTCTGCCTTaGAGAGTATATCTTCCACATCAATTTTCATGGACA +
Preference number: 3 (lower is better)
Translates to: CILPSVEKLLLP*RVYLPHQFSWT
Trigger: TGTCCATGAAAATTGATGTGGAAGATATACTCTGCAAGGCAGAAGCAATTTCTCTACAGATGGTAAAATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR-3UTR CAA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAATTCCAACTCATCCACTaGCAATATTTATCCAATTCC +
Preference number: 3 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEFQLIH*QYLSNS
Trigger: GGAATTGGATAAATATTGCAAGTGGATGAGTTGGAA...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATCTGAAGGTGGTCGTTaGTGTGTAGAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: TSEDTGICVGLSFLAPLASEGGR*CVEGSL
Trigger: CAGCGATCCCTCTACACATCAACGACCACCTTCAGA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATTGGGCTGTCATTTCTaGCTCCACTGGCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: TSEDTGICVGLSFLAPLALGCHF*LHWQRV
Trigger: CACTCTCTGCCAGTGGAGCCAGAAATGACAGCCCAA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCATCTCTTGTTCCTGGCTaGTGGATTTCCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPSLVPG*WISTAV
Trigger: AACTGCAGTGGAAATCCATCAGCCAGGAACAAGAGA...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR CAA 72 bp TTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTaGGGCTGTCATTTCTGGCTCCACTGGCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: LICRHLRTLVSV*GCHFWLHWQRV
Trigger: CACTCTCTGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCACTTTCTTTTGGGGCCTaGGTCCATTCTACAACTGAA +
Preference number: 4 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPLSFGA*VHSTTE
Trigger: TTCAGTTGTAGAATGGACTCAGGCCCCAAAAGAAAG...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TSEDTGICVGLSFLAPLATVQMF*SSMTSF
Trigger: GAAAGAGGTCATCGAGGATCAGAACATCTGAACAGT...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVTGSLL*TTGRSP
Trigger: GGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGT...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCATGCTTGCTTTCTCAATaGATGACTAAGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPCLLSQ*MTKSPS
Trigger: AGAGGGGGACTTAGTCATGCATTGAGAAAGCAAGCA...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTCGCCGCCATGTTTCCTaGGCGTGCCTGGTAATGACG +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTRRHVS*ACLVMT
Trigger: CGTCATTACCAGGCACGCGCAGGAAACATGGCGGCG...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCACTTTTCTCTTGTTCCTaGCTGATGGATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPLFSCS*LMDFHC
Trigger: GCAGTGGAAATCCATCAGCCAGGAACAAGAGAAAAG...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISTGSLL*TTGRSP
Trigger: GGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGT...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGGCAGTGAGCCAGGACTaGGCCACTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKAVSQD*ATALQP
Trigger: AGGCTGGAGTGCAGTGGCGCAGTCCTGGCTCACTGC...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACCAGAAGGCGGAGGCTaGAGTGAGCCAGGACTGCGC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIPEGGG*SEPGLR
Trigger: GCGCAGTCCTGGCTCACTGCAGCCTCCGCCTTCTGG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTTCTGATCCTCGATaGCCTCTTTCTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGICSDPR*PLSFGA
Trigger: GGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACA...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCACTTGTGGCAATTCCTTaGATTTTACCATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPLVAIP*ILPSVE
Trigger: CTCTACAGATGGTAAAATGCAAGGAATTGCCACAAG...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATACTTGAAAAAGGGTTaGAACAAAGTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAYLKKG*NKVSLP
Trigger: GGGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTCACTGGTATCTGTGTTaGGCTGTCATTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVHWYLC*AVISGS
Trigger: GGAGCCAGAAATGACAGCCCAACACAGATACCAGTG...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCAAGTCCATTCTACAACTaGACTGGAGTCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSSPFYN*TGVLSS
Trigger: GCTAGAAAGGACTCCAGTTCAGTTGTAGAATGGACT...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTCTGAAGGTGGTCGTTaGTGTGTAGAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTSEGGR*CVEGSL
Trigger: CAGCGATCCCTCTACACATCAACGACCACCTTCAGA...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCAGTCCATTCTTCCAGTaGTACCGGTTCTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGISPFFQ*YRFSPL
Trigger: CAAAGGAGAGAACCGGTATCACTGGAAGAATGGACT...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLVTSLP*SPRISQ
Trigger: CTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTAC...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTAGCGAGTGGATCACTTaGGGTCAAGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTSEWIT*GQEFET
Trigger: GGTCTCGAACTCTTGACCTCAAGTGATCCACTCGCT...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCATGGGTCTTCATGCCTTaGATTTGTTCTTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAWVFMP*ICSSKF
Trigger: GAATTTTGAAGAACAAATGCAAGGCATGAAGACCCA...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
3UTR CAA 72 bp TGTTCAGATGTTCTGATCCTCGATGACCTCTTTCTTTaGGGGCCTGAGTCCATTCTACAACTGAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: CSDVLILDDLFL*GPESILQLNWS
Trigger: ACTCCAGTTCAGTTGTAGAATGGACTCAGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498482.5
3UTR CAA 72 bp CTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTaGCATACAGTGAGGTTCCTGGATCCTCTGAAAACC +
Preference number: 4 (lower is better)
Translates to: LPPKTFRYIHKT*HTVRFLDPLKT
Trigger: GGTTTTCAGAGGATCCAGGAACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCAGTCCATTCTACAACTaGACTGGAGTCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGISPFYN*TGVLSS
Trigger: GCTAGAAAGGACTCCAGTTCAGTTGTAGAATGGACT...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAACCGGTTCTCTCCTTTaGACAACAGGGCGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKITGSLL*TTGRSP
Trigger: GGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCAGTAAGGTACTCAGCTaGATTAGCTGGGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGISKVLS*ISWVFM
Trigger: CATGAAGACCCAGCTAATTCAGCTGAGTACCTTACT...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGACAGGAGAATCGCTTaGACCCAGAAGGCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIDRRIA*TQKAEA
Trigger: AGCCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGTC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CTGCAGACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCAAAATCCTATCATAGTTaGCGTATAAGGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LQTSEDTGICVGLSFLAPKSYHS*RIRVLF
Trigger: AAAAAGGACCCTTATACGGCAACTATGATAGGATTT...TGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGTCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTAAGGATCTCACAGACTaGTTGTGGCAATTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVKDLTD*LWQFLA
Trigger: TGCAAGGAATTGCCACAAGCAGTCTGTGAGATCCTT...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CTCCTTGATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATAAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: LLDESVEQGERRHPLDRISRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...TATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATCAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR CCA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTGGGTTCTTTCCTCCTTaGTACTGTCCCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVGFFPP*YCPREN
Trigger: ATTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCC...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCACTCACAGACTGCTTGTaGCAATTCCTTGCATTTTAC +
Preference number: 4 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSLTDCL*QFLAFY
Trigger: GTAAAATGCAAGGAATTGCCACAAGCAGTCTGTGAG...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CATCCAATGGTCTCCAGTCCACTATTACTTCGGCATCCTTTTCTAAAACACGTAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: HPMVSSPLLLRHPFLKHVTVQMF*SSMTSF
Trigger: GAAAGAGGTCATCGAGGATCAGAACATCTGAACAGT...TACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGGACTGGAGACCATTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp GATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACCAAATTCAGGTCTGTCAAACTaGACAGGAATGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: DESVEQGERRHPLDRIPNSGLSN*TGMTIC
Trigger: GCAAATGGTCATTCCTGTTCAGTTTGACAGACCTGA...ATTTGGTATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR TCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTAGTCCATTCTTCCAGTaGTACCGGTTCTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTSPFFQ*YRFSPL
Trigger: CAAAGGAGAGAACCGGTATCACTGGAAGAATGGACT...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVVFTNV*IWCCNF
Trigger: GAAGTTACAACACCAGATTCAGACGTTGGTGAAGAC...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTACGGTTCTACTGTCGTaGTTGTCAGTTAATGCTCAA +
Preference number: 4 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVTVLLS*LSVNAQ
Trigger: TTGAGCATTAACTGACAATCACGACAGTAGAACCGT...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTAACCATGTCCCATTCTaGTTCGTAACTGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVNHVPF*FVTVQM
Trigger: CATCTGAACAGTTACGAAGCAGAATGGGACATGGTT...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVSRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp GTAATATTCCTGAAATCAAGCCGTCTTGGTCATTGGTCTTTCCACAAGATGAGTCTTTCTTTTGGGGCCTaGGTCCATTCTACAACTGAA +
Preference number: 4 (lower is better)
Translates to: VIFLKSSRLGHWSFHKMSLSFGA*VHSTTE
Trigger: TTCAGTTGTAGAATGGACTCAGGCCCCAAAAGAAAG...ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGGAATATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp ATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTCTTGTTCTGATCCTCGATaGCCTCTTTCTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ITSASFSKTRNIPEIKPSCSDPR*PLSFGA
Trigger: GGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACA...AGACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CGTAATATTCCTGAAATCAAGCCGTCTTGGTCATTGGTCTTTCCACAAGATGAGCTTTTCCCATTTCTATaGCTTGGAGCATCTCCATTG +
Preference number: 4 (lower is better)
Translates to: RNIPEIKPSWSLVFPQDELFPFL*LGASPL
Trigger: CAATGGAGATGCTCCAAGTCATAGAAATGGGAAAAG...CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGGAATATTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp GTAATATTCCTGAAATCAAGCCGTCTTGGTCATTGGTCTTTCCACAAGATGAGTTCAGGTCTGTCAAACTaGACAGGAATGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: VIFLKSSRLGHWSFHKMSSGLSN*TGMTIC
Trigger: GCAAATGGTCATTCCTGTTCAGTTTGACAGACCTGA...ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGGAATATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTCCTCTTTGTTTTGCTTaGTTGATTTCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVPLCFA*LISGLS
Trigger: TGACAGACCTGAAATCAATCAAGCAAAACAAAGAGG...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATCTGAAGGTGGTCGTTaGTGTGTAGAGGGATCGCTG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISEGGR*CVEGSL
Trigger: CAGCGATCCCTCTACACATCAACGACCACCTTCAGA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTTGCTTTCTCAATGCATaGCTAAGTCCCCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVCFLNA*LSPPLN
Trigger: ATTTAGAGGGGGACTTAGTCATGCATTGAGAAAGCA...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTVFTNV*IWCCNF
Trigger: GAAGTTACAACACCAGATTCAGACGTTGGTGAAGAC...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CATCCAATGGTCTCCAGTCCACTATTACTTCGGCATCCTTTTCTAAAACACGTAAACCATGTCCCATTCTaGTTCGTAACTGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: HPMVSSPLLLRHPFLKHVNHVPF*FVTVQM
Trigger: CATCTGAACAGTTACGAAGCAGAATGGGACATGGTT...TACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGGACTGGAGACCATTGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR GCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTGCTTGCTTTCTCAATaGATGACTAAGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTCLLSQ*MTKSPS
Trigger: AGAGGGGGACTTAGTCATGCATTGAGAAAGCAAGCA...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp TTCAAAATTCTGATGCATTTGGTCCATGTAAGAGGCAAAGCACCAAAAGGCATCAAGGATCTCACAGACTaGTTGTGGCAATTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: FKILMHLVHVRGKAPKGIKDLTD*LWQFLA
Trigger: TGCAAGGAATTGCCACAAGCAGTCTGTGAGATCCTT...GATGCCTTTTGGTGCTTTGCCTCTTACATGGACCAAATGCATCAGAATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp TTCAAAATTCTGATGCATTTGGTCCATGTAAGAGGCAAAGCACCAAAAGGCATCATGCAGGTGTTAATCTaGAGACATCTGAGGACACTG +
Preference number: 4 (lower is better)
Translates to: FKILMHLVHVRGKAPKGIMQVLI*RHLRTL
Trigger: CAGTGTCCTCAGATGTCTGCAGATTAACACCTGCAT...GATGCCTTTTGGTGCTTTGCCTCTTACATGGACCAAATGCATCAGAATTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLEIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp CGTCATCCTTTAGACAGAATACCAAATAGGACCAGCCCATACCCTCTTTGTTTTGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: RHPLDRIPNRTSPYPLCFEIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...AAAACAAAGAGGGTATGGGCTGGTCCTATTTGGTATTCTGTCTAAAGGATGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATTGGGCTGTCATTTCTaGCTCCACTGGCAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILGCHF*LHWQRV
Trigger: CACTCTCTGCCAGTGGAGCCAGAAATGACAGCCCAA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATCACTGGTATCTGTGTTaGGCTGTCATTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINHWYLC*AVISGS
Trigger: GGAGCCAGAAATGACAGCCCAACACAGATACCAGTG...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp CGTCATCCTTTAGACAGAATACCAAATAGGACCAGCCCATACCCTCTTTGTTTTGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: RHPLDRIPNRTSPYPLCFGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...AAAACAAAGAGGGTATGGGCTGGTCCTATTTGGTATTCTGTCTAAAGGATGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGTTCTGATCCTCGATaGCCTCTTTCTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKICSDPR*PLSFGA
Trigger: GGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAATGTTCTGATCCTCGATaGCCTCTTTCTTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSECSDPR*PLSFGA
Trigger: GGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACA...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCCTTTTCCCATTTCTATaGCTTGGAGCATCTCCATTG +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISLFPFL*LGASPL
Trigger: CAATGGAGATGCTCCAAGTCATAGAAATGGGAAAAG...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp GATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACCAAATCAAACTGAACAGGAATaGCCATTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: DESVEQGERRHPLDRIPNQTEQE*PFAFPI
Trigger: AATGGGAAAAGCAAATGGTCATTCCTGTTCAGTTTG...ATTTGGTATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR TCA 90 bp CATCCAATGGTCTCCAGTCCACTATTACTTCGGCATCCTTTTCTAAAACACGTACAAACTGAACAGGAATaGCCATTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: HPMVSSPLLLRHPFLKHVQTEQE*PFAFPI
Trigger: AATGGGAAAAGCAAATGGTCATTCCTGTTCAGTTTG...TACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGGACTGGAGACCATTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CGTCATCCTTTAGACAGAATACCAAATAGGACCAGCCCATACCCTCTTTGTTTTCCTCTTTGTTTTGCTTaGTTGATTTCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: RHPLDRIPNRTSPYPLCFPLCFA*LISGLS
Trigger: TGACAGACCTGAAATCAATCAAGCAAAACAAAGAGG...AAAACAAAGAGGGTATGGGCTGGTCCTATTTGGTATTCTGTCTAAAGGATGACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR TCA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTCCTGGTTCTTCTTGTTaGTTTATCTTTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLPGSSC*FIFRPG
Trigger: TCCAGGTCTAAAGATAAATCAACAAGAAGAACCAGG...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIVTSLP*SPRISQ
Trigger: CTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTAC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAGTAACTTCACTGCCTTaGAGCCCAAGGATCTCACAG +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEVTSLP*SPRISQ
Trigger: CTGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTAC...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGCTGGACTCTGTGGACTaGTTTAAGACTTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKLDSVD*FKTSPG
Trigger: TCCAGGAGAAGTCTTAAATCAGTCCACAGAGTCCAG...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAGGTTCCTGGATCCTCTaGAAACCCCAAGTAAAGACG +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEGSWIL*KPQVKT
Trigger: CGTCTTTACTTGGGGTTTTCAGAGGATCCAGGAACC...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCCTGACTTCCAAAGACTaGTTCTGTAAGCCTGAAGTA +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISLTSKD*FCKPEV
Trigger: TACTTCAGGCTTACAGAATCAGTCTTTGGAAGTCAG...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCAACCATGTCCCATTCTaGTTCGTAACTGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISNHVPF*FVTVQM
Trigger: CATCTGAACAGTTACGAAGCAGAATGGGACATGGTT...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCATCCAACTCATCCACTTaGAATATTTATCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSSNSST*NIYPIP
Trigger: TGGAATTGGATAAATATTGCAAGTGGATGAGTTGGA...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACACTGGTATCTGTGTTaGGCTGTCATTTCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIHWYLC*AVISGS
Trigger: GGAGCCAGAAATGACAGCCCAACACAGATACCAGTG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAGTCCATTCTTCCAGTaGTACCGGTTCTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISPFFQ*YRFSPL
Trigger: CAAAGGAGAGAACCGGTATCACTGGAAGAATGGACT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATCTCTTGTTCCTGGCTaGTGGATTTCCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISLVPG*WISTAV
Trigger: AACTGCAGTGGAAATCCATCAGCCAGGAACAAGAGA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAATCTCTTGTTCCTGGCTaGTGGATTTCCACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSESLVPG*WISTAV
Trigger: AACTGCAGTGGAAATCCATCAGCCAGGAACAAGAGA...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATAGTAAGGTACTCAGCTaGATTAGCTGGGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINSKVLS*ISWVFM
Trigger: CATGAAGACCCAGCTAATTCAGCTGAGTACCTTACT...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCCTTTCAGAAACTATGTaGCCTGCCTCCAAAAACATT +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISLSETM*PASKNI
Trigger: AATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAAG...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CTCCTTGATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATAATACCCTCTTTGTTTTaGTTGATTGATTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LLDESVEQGERRHPLDRIIPSLF*LIDFRS
Trigger: AGACCTGAAATCAATCAAGCAAAACAAAGAGGGTAT...TATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATCAAGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR GCA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTAAATCCTATCATAGTTaGCGTATAAGGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVKSYHS*RIRVLF
Trigger: AAAAAGGACCCTTATACGGCAACTATGATAGGATTT...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTAAATTGCTTCTGCCTTaGAGAGTATATCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLKLLLP*RVYLPH
Trigger: ATGTGGAAGATATACTCTGCAAGGCAGAAGCAATTT...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR GCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATATGCAGGTGTTAATCTaGAGACATCTGAGGACACTG +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINMQVLI*RHLRTL
Trigger: CAGTGTCCTCAGATGTCTGCAGATTAACACCTGCAT...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTACTTGAAAAAGGGTTaGAACAAAGTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTYLKKG*NKVSLP
Trigger: GGGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTA...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTAGAAACTATGTGACCTaGCTCCAAAAACATTCAGGT +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTRNYVT*LQKHSG
Trigger: ACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCT...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: LLLRHPFLKHVIFLKSSRSRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...ACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR CCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKSRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CGTCATCCTTTAGACAGAATACCAAATAGGACCAGCCCATACCCTCTTTGTTTTTGTTCTTTTATCCTGTaGAGATTCACACAATACCAC +
Preference number: 4 (lower is better)
Translates to: RHPLDRIPNRTSPYPLCFCSFIL*RFTQYH
Trigger: GTGGTATTGTGTGAATCTCCACAGGATAAAAGAACA...AAAACAAAGAGGGTATGGGCTGGTCCTATTTGGTATTCTGTCTAAAGGATGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGGGTTCTTTCCTCCTTaGTACTGTCCCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIGFFPP*YCPREN
Trigger: ATTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAGGGTTCTTTCCTCCTTaGTACTGTCCCAGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEGFFPP*YCPREN
Trigger: ATTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCC...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTTGTTCTTTTATCCTGTaGAGATCTCCATTGGTATGT +
Preference number: 4 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVCSFIL*RSPLVC
Trigger: ACATACCAATGGAGATCTCCACAGGATAAAAGAACA...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGTTTTCCAGTGGTGAATaGCCCACAACAGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKFSSGE*PTTAFF
Trigger: GAAGAAAGCTGTTGTGGGCCATTCACCACTGGAAAA...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAGTCCATTCTACAACTaGACTGGAGTCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISPFYN*TGVLSS
Trigger: GCTAGAAAGGACTCCAGTTCAGTTGTAGAATGGACT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp TCCACTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGAGTCCATTCTACAACTaGACTGGAGTCCTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: STITSASFSKTRNIPEIKSPFYN*TGVLSS
Trigger: GCTAGAAAGGACTCCAGTTCAGTTGTAGAATGGACT...CTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTTCTTTTGGGGCCTaGGTCCATTCTACAACTGAA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILSFGA*VHSTTE
Trigger: TTCAGTTGTAGAATGGACTCAGGCCCCAAAAGAAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKITVQMF*SSMTSF
Trigger: GAAAGAGGTCATCGAGGATCAGAACATCTGAACAGT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAACTGTTCAGATGTTCTaGTCCTCGATGACCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSETVQMF*SSMTSF
Trigger: GAAAGAGGTCATCGAGGATCAGAACATCTGAACAGT...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATCAGGTCTGTCAAACTaGACAGGAATGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISGLSN*TGMTIC
Trigger: GCAAATGGTCATTCCTGTTCAGTTTGACAGACCTGA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAATCAGGTCTGTCAAACTaGACAGGAATGACCATTTGC +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSESGLSN*TGMTIC
Trigger: GCAAATGGTCATTCCTGTTCAGTTTGACAGACCTGA...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAGTAAGGTACTCAGCTaGATTAGCTGGGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISKVLS*ISWVFM
Trigger: CATGAAGACCCAGCTAATTCAGCTGAGTACCTTACT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGTCTTCACCAACGTCTaGATCTGGTGTTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIVFTNV*IWCCNF
Trigger: GAAGTTACAACACCAGATTCAGACGTTGGTGAAGAC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTAACAGATCAAAGATTTaGGGAAGTAGCACCACCTGT +
Preference number: 4 (lower is better)
Translates to: LLLRHPFLKHVIFLKSSRNRSKI*GSSTTC
Trigger: ACAGGTGGTGCTACTTCCTCAAATCTTTGATCTGTT...ACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGTGCAGATTCCTGATCTaGCTTCCAAAGACTGATTCT +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKCRFLI*LPKTDS
Trigger: AGAATCAGTCTTTGGAAGTCAGATCAGGAATCTGCA...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CGTCATCCTTTAGACAGAATACCAAATAGGACCAGCCCATACCCTCTTTGTTTTAAATCCTATCATAGTTaGCGTATAAGGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RHPLDRIPNRTSPYPLCFKSYHS*RIRVLF
Trigger: AAAAAGGACCCTTATACGGCAACTATGATAGGATTT...AAAACAAAGAGGGTATGGGCTGGTCCTATTTGGTATTCTGTCTAAAGGATGACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGCTTGCTTTCTCAATaGATGACTAAGTCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKICLLSQ*MTKSPS
Trigger: AGAGGGGGACTTAGTCATGCATTGAGAAAGCAAGCA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAGGATCTCACAGACTaGTTGTGGCAATTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKDLTD*LWQFLA
Trigger: TGCAAGGAATTGCCACAAGCAGTCTGTGAGATCCTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAATGCAGGTGTTAATCTaGAGACATCTGAGGACACTG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIMQVLI*RHLRTL
Trigger: CAGTGTCCTCAGATGTCTGCAGATTAACACCTGCAT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISRLGH*SFHKMS
Trigger: ACTCATCTTGTGGAAAGACCAATGACCAAGACGGCT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: LLLRHPFLKHVIFLKSSREIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...ACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR CCA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCTGTTCTTTTATCCTGTaGAGATTCACACAATACCAC +
Preference number: 4 (lower is better)
Translates to: CFTESNNCIFQGNTVPISCSFIL*RFTQYH
Trigger: GTGGTATTGTGTGAATCTCCACAGGATAAAAGAACA...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTTTCTCTTGTTCCTaGCTGATGGATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILFSCS*LMDFHC
Trigger: GCAGTGGAAATCCATCAGCCAGGAACAAGAGAAAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAACTTTTCTCTTGTTCCTaGCTGATGGATTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSELFSCS*LMDFHC
Trigger: GCAGTGGAAATCCATCAGCCAGGAACAAGAGAAAAG...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTAAAATGATGTTCTCCTaGTACATATCTGCACGTAAG +
Preference number: 4 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTKMMFS*YISARK
Trigger: CTTACGTGCAGATATGTACCAGGAGAACATCATTTT...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp ATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTCTGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: ITSASFSKTRNIPEIKPSGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...AGACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTTTCCCATTTCTATaGCTTGGAGCATCTCCATTG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILFPFL*LGASPL
Trigger: CAATGGAGATGCTCCAAGTCATAGAAATGGGAAAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATCAAACTGAACAGGAATaGCCATTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINQTEQE*PFAFPI
Trigger: AATGGGAAAAGCAAATGGTCATTCCTGTTCAGTTTG...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGCCTGGTTCTTCTTGTTaGTTTATCTTTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKPGSSC*FIFRPG
Trigger: TCCAGGTCTAAAGATAAATCAACAAGAAGAACCAGG...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGCTTTCTCAATGCATaGCTAAGTCCCCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKICFLNA*LSPPLN
Trigger: ATTTAGAGGGGGACTTAGTCATGCATTGAGAAAGCA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAATGCTTTCTCAATGCATaGCTAAGTCCCCCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSECFLNA*LSPPLN
Trigger: ATTTAGAGGGGGACTTAGTCATGCATTGAGAAAGCA...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGAAAGGCTGGAGATGCTaGGTTTTTGATCAGTTTATG +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKKGWRC*VFDQFM
Trigger: CATAAACTGATCAAAAACTCAGCATCTCCAGCCTTT...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAACCATGTCCCATTCTaGTTCGTAACTGTTCAGATG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKINHVPF*FVTVQM
Trigger: CATCTGAACAGTTACGAAGCAGAATGGGACATGGTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATCTTGTGGCAATTCCTTaGATTTTACCATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINLVAIP*ILPSVE
Trigger: CTCTACAGATGGTAAAATGCAAGGAATTGCCACAAG...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIEIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAGAAATCAAGCCGTCTTaGTCATTGGTCTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEEIKPS*SLVFPQ
Trigger: TTGTGGAAAGACCAATGACCAAGACGGCTTGATTTC...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTCACAGACTGCTTGTaGCAATTCCTTGCATTTTAC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILTDCL*QFLAFY
Trigger: GTAAAATGCAAGGAATTGCCACAAGCAGTCTGTGAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATTGGGTACTCAAAGTATaGTTTCTATTCAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINWVLKV*FLFSAL
Trigger: CAGTGCACTGAATAGAAACCATACTTTGAGTACCCA...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGGTCTTTCCACAAGATaGGTGAATATATACTCCTTC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIGLSTR*VNIYSF
Trigger: GAAGGAGTATATATTCACTCATCTTGTGGAAAGACC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACAAACTGAACAGGAATaGCCATTTGCTTTTCCCATT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIQTEQE*PFAFPI
Trigger: AATGGGAAAAGCAAATGGTCATTCCTGTTCAGTTTG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACCTCTTTGTTTTGCTTaGTTGATTTCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIPLCFA*LISGLS
Trigger: TGACAGACCTGAAATCAATCAAGCAAAACAAAGAGG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp TCCACTATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCTCTTTGTTTTGCTTaGTTGATTTCAGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: STITSASFSKTRNIPEIKPLCFA*LISGLS
Trigger: TGACAGACCTGAAATCAATCAAGCAAAACAAAGAGG...CTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAATAGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACCTGGTTCTTCTTGTTaGTTTATCTTTAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIPGSSC*FIFRPG
Trigger: TCCAGGTCTAAAGATAAATCAACAAGAAGAACCAGG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTACATATAACAGGCTaGGCTGTCATCACTTTTTAC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILHITG*AVITFY
Trigger: GTAAAAAGTGATGACAGCTCAGCCTGTTATATGTAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGAAATTGCTTCTGCCTTaGAGAGTATATCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKKLLLP*RVYLPH
Trigger: ATGTGGAAGATATACTCTGCAAGGCAGAAGCAATTT...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTGTGGCAATTCCTTaGATTTTACCATCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILVAIP*ILPSVE
Trigger: CTCTACAGATGGTAAAATGCAAGGAATTGCCACAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATACTTGAAAAAGGGTTaGAACAAAGTGTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIYLKKG*NKVSLP
Trigger: GGGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTCTCAGCTTAGAATaGTATAGAAAGCCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILLSLE*YRKPPH
Trigger: ATGTGGAGGCTTTCTATAGCATTCTAAGCTGAGAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATAGAGTATTTGCTAACTaGACTCTGTGGACTGATTTA +
Preference number: 4 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINRVFAN*TLWTDL
Trigger: TAAATCAGTCCACAGAGTCCAGTTAGCAAATACTCT...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAACATGTTATAAGGGTGTaGACAGAGCATCTTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEHVIRV*TEHLVK
Trigger: TTTCACAAGATGCTCTGTCCACACCCTTATAACATG...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR TCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATTTCGTGCTCAGAAGTaGCACAGAAAGCTTAATTTT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIFRAQK*HRKLNF
Trigger: AAAATTAAGCTTTCTGTGTCACTTCTGAGCACGAAA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGGGTCTTCATGCCTTaGATTTGTTCTTCAAAATTC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIWVFMP*ICSSKF
Trigger: GAATTTTGAAGAACAAATGCAAGGCATGAAGACCCA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAATTGCTTCTGCCTTaGAGAGTATATCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKLLLP*RVYLPH
Trigger: ATGTGGAAGATATACTCTGCAAGGCAGAAGCAATTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAATGGTTTCTATTCAGTaGACTGCTTTAAAGCCATCA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIMVSIQ*TALKPS
Trigger: TGATGGCTTTAAAGCAGTGCACTGAATAGAAACCAT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGTTCTTTTATCCTGTaGAGATTCACACAATACCAC +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKICSFIL*RFTQYH
Trigger: GTGGTATTGTGTGAATCTCCACAGGATAAAAGAACA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAATCCTATCATAGTTaGCGTATAAGGGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKSYHS*RIRVLF
Trigger: AAAAAGGACCCTTATACGGCAACTATGATAGGATTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR GCA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATCCAACTCATCCACTTaGAATATTTATCCAATTCCA +
Preference number: 4 (lower is better)
Translates to: PTHPLAIFIQFQFISKKISNSST*NIYPIP
Trigger: TGGAATTGGATAAATATTGCAAGTGGATGAGTTGGA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CCA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAAGTAAAAGTGAAAAATaGCTGTATGGGTACTCAAAG +
Preference number: 4 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSESKSEK*LYGYSK
Trigger: CTTTGAGTACCCATACAGCCATTTTTCACTTTTACT...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp TCCATTCTTCCAGTGATACCGGTTCTCTCCTTTGAACAACAGGGCGTTCCCCCATGGGTTCTTTCCTCCTaGGTACTGTCCCAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: SILPVIPVLSFEQQGVPPWVLSS*VLSQGK
Trigger: TTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCCA...TGGGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTATCACTGGAAGAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp CTGCAGACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCAACACTGGTATCTGTGTaGGGCTGTCATTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LQTSEDTGICVGLSFLAPTLVSV*GCHFWL
Trigger: GAGCCAGAAATGACAGCCCAACACAGATACCAGTGT...TGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGTCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTTACCGGTTCTCTCCTTaGAACAACAGGGCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVYRFSP*NNRAFP
Trigger: GGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTA...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCACTGTGGAGATCTCCATaGGTATGTGGTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: TSEDTGICVGLSFLAPLALWRSP*VCGFLL
Trigger: TAAAAGGAAACCACATACCAATGGAGATCTCCACAG...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp ACATCTGAGGACACTGGTATCTGTGTTGGGCTGTCATTTCTGGCTCCACTGGCAGTACTTGAAAAAGGGTaGCAACAAAGTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TSEDTGICVGLSFLAPLAVLEKG*QQSVSS
Trigger: GGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTAC...TGCCAGTGGAGCCAGAAATGACAGCCCAACACAGATACCAGTGTCCTCAGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp CTTCGTAACTGTTCAGATGTTCTGATCCTCGATGACCTCTTTCTTTTGGGGCCTAAGCCGTCTTGGTCATaGGTCTTTCCACAAGATGAG +
Preference number: 5 (lower is better)
Translates to: LRNCSDVLILDDLFLLGPKPSWS*VFPQDE
Trigger: CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTT...AGGCCCCAAAAGAAAGAGGTCATCGAGGATCAGAACATCTGAACAGTTACGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR CAA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTTGGGTTCTTTCCTCCTaGGTACTGTCCCAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVWVLSS*VLSQGK
Trigger: TTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCCA...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTAAGCCGTCTTGGTCATaGGTCTTTCCACAAGATGAG +
Preference number: 5 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVKPSWS*VFPQDE
Trigger: CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTT...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp CTCCTTGATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATAAAGCCGTCTTGGTCATaGGTCTTTCCACAAGATGAG +
Preference number: 5 (lower is better)
Translates to: LLDESVEQGERRHPLDRIKPSWS*VFPQDE
Trigger: CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTT...TATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATCAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR CAA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTAAGCCGTCTTGGTCATaGGTCTTTCCACAAGATGAG +
Preference number: 5 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVKPSWS*VFPQDE
Trigger: CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTT...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTAACTTCACTGCCTaGAAGCCCAAGGATCTCACA +
Preference number: 5 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGICNFTA*KPKDLT
Trigger: TGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTACA...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCACTTGGAGCATCTCCATaGGTATGTGGTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSLGASP*VCGFLL
Trigger: TAAAAGGAAACCACATACCAATGGAGATGCTCCAAG...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGTACCGGTTCTCTCCTTaGAACAACAGGGCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKYRFSP*NNRAFP
Trigger: GGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTA...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCAGCTTGTGGCAATTCCTaGCATTTTACCATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSACGNS*HFTICR
Trigger: TCTACAGATGGTAAAATGCAAGGAATTGCCACAAGC...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAGACAGGAGAATCGCTaGAACCCAGAAGGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIRQENR*NPEGGG
Trigger: GCCTCCGCCTTCTGGGTTCAAGCGATTCTCCTGTCT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp CTCCTTGATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACAGCCCATACCCTCTTaGTTTTGCTTGATTGATTTC +
Preference number: 5 (lower is better)
Translates to: LLDESVEQGERRHPLDRIQPIPS*FCLIDF
Trigger: GAAATCAATCAAGCAAAACAAAGAGGGTATGGGCTG...TATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATCAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATACCGGTTCTCTCCTTaGAACAACAGGGCGTTCCCC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIYRFSP*NNRAFP
Trigger: GGGGAACGCCCTGTTGTTCAAAGGAGAGAACCGGTA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTGCATACAGTGAGGTTGAAGAAGATGGAAATTaGTACATGGTAGTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PASKNIQVHPQDFAYSEVEEDGN*YMVVRS
Trigger: GGACCGAACTACCATGTACAAATTTCCATCTTCTTC...AACCTCACTGTATGCAAAGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp ATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCATTTGTTGATCTCACAGACTGCTaGTGGCAATTCCTTGCATTT +
Preference number: 5 (lower is better)
Translates to: IEVRYSAELAGSSCLAFVDLTDC*WQFLAF
Trigger: AAATGCAAGGAATTGCCACAAGCAGTCTGTGAGATC...AACAAATGCAAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp AGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCTGTGTTCGAATTTCTTTTCTCTaGTTCCTGGCTGATGGATTT +
Preference number: 5 (lower is better)
Translates to: SDHAGVNLQTSEDTGICVRISFL*FLADGF
Trigger: AAATCCATCAGCCAGGAACAAGAGAAAAGAAATTCG...AACACAGATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGAAGAAGATGGAAATTaGTACATGGTAGTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLEEDGN*YMVVRS
Trigger: GGACCGAACTACCATGTACAAATTTCCATCTTCTTC...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp TGCTTTACTGAGTCAAATAACTGTATCTTTCAAGGCAACACTGTGCCCATTTCCCCATCTGTAGAGAAATaGCTTCTGCCTTGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: CFTESNNCIFQGNTVPISPSVEK*LLPCRV
Trigger: TACTCTGCAAGGCAGAAGCAATTTCTCTACAGATGG...GGAAATGGGCACAGTGTTGCCTTGAAAGATACAGTTATTTGACTCAGTAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp TGTCTAACAATCGAAGTAAGGTACTCAGCTGAATTAGCTGGGTCTTCATGCCTTGCTTGTGGCAATTCCTaGCATTTTACCATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: CLTIEVRYSAELAGSSCLACGNS*HFTICR
Trigger: TCTACAGATGGTAAAATGCAAGGAATTGCCACAAGC...AAGGCATGAAGACCCAGCTAATTCAGCTGAGTACCTTACTTCGATTGTTAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp GGGTACTCAAAGTATGGTTTCTATTCAGTGCACTGCTTTAAAGCCATCATAAATACACTGGTATCTGTGTaGGGCTGTCATTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GYSKYGFYSVHCFKAIINTLVSV*GCHFWL
Trigger: GAGCCAGAAATGACAGCCCAACACAGATACCAGTGT...ATTTATGATGGCTTTAAAGCAGTGCACTGAATAGAAACCATACTTTGAGTACCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AGCAGGAACAAACTCCCAAAAAGTCACTGTCCAGGAAGAACAAGGAGGACATCAAAGGGAATTGTCCACTaGGCCATAAATCAAAAGATT +
Preference number: 5 (lower is better)
Translates to: SRNKLPKSHCPGRTRRTSKGIVH*AINQKI
Trigger: AATCTTTTGATTTATGGCCAAGTGGACAATTCCCTT...TGATGTCCTCCTTGTTCTTCCTGGACAGTGACTTTTTGGGAGTTTGTTCCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS TCA 90 bp ATATATAATCTTGAGAAAAAGAAAGGGAAGAACAGATCAAAGATTTaGGGAAGTAGCACCACCTGTCACCAAGCGAATCTTCCCGCTCAC +
Preference number: 5 (lower is better)
Translates to: IYNLEKKKGKNRSKI*GSSTTCHQANLPAH
Trigger: GTGAGCGGGAAGATTCGCTTGGTGACAGGTGGTGCTACTTCCTCAAATCTTTGATCTGTTCTTCCCTTTCTTTTTCTCAAGATTATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491063.5
ENST00000549402.5
CDS GCA 90 bp AACCTCGAATTTCTTTTCTCTTGTTCCTGGCTGATGGATTTCCACTaGAGTTTCATTCTGAAGTATTCATCACTGGAAAGTTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: NLEFLFSCSWLMDFH*SFILKYSSLESWSV
Trigger: CACAGACCAACTTTCCAGTGATGAATACTTCAGAATGAAACTGCAGTGGAAATCCATCAGCCAGGAACAAGAGAAAAGAAATTCGAGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548679.5
CDS-3UTR CAA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTCAGCCCATACCCTCTTaGTTTTGCTTGATTGATTTC +
Preference number: 5 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTQPIPS*FCLIDF
Trigger: GAAATCAATCAAGCAAAACAAAGAGGGTATGGGCTG...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGGGTTCTTTCCTCCTaGGTACTGTCCCAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIWVLSS*VLSQGK
Trigger: TTTTCCCTGGGACAGTACCAAGGAGGAAAGAACCCA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp AAGAACAGTGATCATGCAGGTGTTAATCTGCAGACATCTGAGGACACTGGTATCAAAATTCTGATGCATTaGGTCCATGTAAGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: KNSDHAGVNLQTSEDTGIKILMH*VHVRGK
Trigger: TTTGCCTCTTACATGGACCAAATGCATCAGAATTTT...GATACCAGTGTCCTCAGATGTCTGCAGATTAACACCTGCATGATCACTGTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAACACTGGTATCTGTGTaGGGCTGTCATTTCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKITLVSV*GCHFWL
Trigger: GAGCCAGAAATGACAGCCCAACACAGATACCAGTGT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTGTACTTGAAAAAGGGTaGCAACAAAGTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTVLEKG*QQSVSS
Trigger: GGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTAC...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp GATGAAAGTGTAGAGCAGGGAGAACGACGTCATCCTTTAGACAGAATACCAAATTCCCATTTCTATGACTaGGAGCATCTTTCTAGCATA +
Preference number: 5 (lower is better)
Translates to: DESVEQGERRHPLDRIPNSHFYD*EHLSSI
Trigger: TATGCTAGAAAGATGCTCCAAGTCATAGAAATGGGA...ATTTGGTATTCTGTCTAAAGGATGACGTCGTTCTCCCTGCTCTACACTTTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472611.6
CDS TCA 90 bp CCTGAAATCAAGCCGTCTTGGTCATTGGTCTTTCCACAAGATGAGTaGATATATACTCCTTCTTGTTCATATATAATCTTCCCGCTCACA +
Preference number: 5 (lower is better)
Translates to: PEIKPSWSLVFPQDE*IYTPSCSYIIFPLT
Trigger: TGTGAGCGGGAAGATTATATATGAACAAGAAGGAGTATATATTCACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000462788.6
ENST00000468049.2
ENST00000472611.6
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAGCCGTCTTGGTCATaGGTCTTTCCACAAGATGAG +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKPSWS*VFPQDE
Trigger: CTCATCTTGTGGAAAGACCAATGACCAAGACGGCTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CAAGGAGTCATGACAACATTTTCGTCTTCACCAACGTCTGAATCTGGTGTTGTAAAGAAATTTCCATGCTaGCTTTCTCAATGCATGACT +
Preference number: 5 (lower is better)
Translates to: QGVMTTFSSSPTSESGVVKKFPC*LSQCMT
Trigger: AGTCATGCATTGAGAAAGCAAGCATGGAAATTTCTT...TACAACACCAGATTCAGACGTTGGTGAAGACGAAAATGTTGTCATGACTCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462788.6
CDS-3UTR CAA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTCGAATTTCTTTTCTCTaGTTCCTGGCTGATGGATTT +
Preference number: 5 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTRISFL*FLADGF
Trigger: AAATCCATCAGCCAGGAACAAGAGAAAAGAAATTCG...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp AAATTTCTTGGCAATGTCAAGTTCCTAAGAATCACTCACTATCTGTCCCAAAAGGATCTCACAGACTGCTaGTGGCAATTCCTTGCATTT +
Preference number: 5 (lower is better)
Translates to: KFLGNVKFLRITHYLSQKDLTDC*WQFLAF
Trigger: AAATGCAAGGAATTGCCACAAGCAGTCTGTGAGATC...CTTTTGGGACAGATAGTGAGTGATTCTTAGGAACTTGACATTGCCAAGAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATGTAACTTCACTGCCTaGAAGCCCAAGGATCTCACA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKICNFTA*KPKDLT
Trigger: TGTGAGATCCTTGGGCTTCAAGGCAGTGAAGTTACA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp ATTACTTCGGCATCCTTTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTCTCTTGGAGCATCTCCATaGGTATGTGGTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: ITSASFSKTRNIPEIKPSLGASP*VCGFLL
Trigger: TAAAAGGAAACCACATACCAATGGAGATGCTCCAAG...AGACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAAAGGATGCCGAAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACCATCTGTAGAGAAATaGCTTCTGCCTTGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIPSVEK*LLPCRV
Trigger: TACTCTGCAAGGCAGAAGCAATTTCTCTACAGATGG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGATCTCACAGACTGCTaGTGGCAATTCCTTGCATTT +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIDLTDC*WQFLAF
Trigger: AAATGCAAGGAATTGCCACAAGCAGTCTGTGAGATC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp TTTCAGAAACTATGTGACCTGCCTCCAAAAACATTCAGGTACATCCACAAGACTTTCCAACTCATCCACTaGCAATATTTATCCAATTCC +
Preference number: 5 (lower is better)
Translates to: FQKLCDLPPKTFRYIHKTFQLIH*QYLSNS
Trigger: GGAATTGGATAAATATTGCAAGTGGATGAGTTGGAA...AGTCTTGTGGATGTACCTGAATGTTTTTGGAGGCAGGTCACATAGTTTCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS TCA 90 bp CCTGAAATCAAGCCGTCTTGGTCATTGGTCTTTCCACAAGATGAGTaGATATATACTCCTTCTTGTTCATATATAATCATACTCCTACCA +
Preference number: 5 (lower is better)
Translates to: PEIKPSWSLVFPQDE*IYTPSCSYIIILLP
Trigger: TGGTAGGAGTATGATTATATATGAACAAGAAGGAGTATATATTCACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319106.12
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACTTGGAGCATCTCCATaGGTATGTGGTTTCCTTTTA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKILGASP*VCGFLL
Trigger: TAAAAGGAAACCACATACCAATGGAGATGCTCCAAG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACAGCCCATACCCTCTTaGTTTTGCTTGATTGATTTC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIQPIPS*FCLIDF
Trigger: GAAATCAATCAAGCAAAACAAAGAGGGTATGGGCTG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGAAGAAGATGGAAATTaGTACATGGTAGTTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIEEDGN*YMVVRS
Trigger: GGACCGAACTACCATGTACAAATTTCCATCTTCTTC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGCTTGTGGCAATTCCTaGCATTTTACCATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIACGNS*HFTICR
Trigger: TCTACAGATGGTAAAATGCAAGGAATTGCCACAAGC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAGTACTTGAAAAAGGGTaGCAACAAAGTGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIVLEKG*QQSVSS
Trigger: GGAAGAGACACTTTGTTGCAACCCTTTTTCAAGTAC...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATACGAATTTCTTTTCTCTaGTTCCTGGCTGATGGATTT +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIRISFL*FLADGF
Trigger: AAATCCATCAGCCAGGAACAAGAGAAAAGAAATTCG...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS TCA 90 bp ATATATAATCTTGAGAAAAAGAAAGGGAAGAACAGATCAAAGATTTaGGGAAGTAGCACCACCTGTCACCAAGCGAATCATCTGTTAAAA +
Preference number: 5 (lower is better)
Translates to: IYNLEKKKGKNRSKI*GSSTTCHQANHLLK
Trigger: TTTTAACAGATGATTCGCTTGGTGACAGGTGGTGCTACTTCCTCAAATCTTTGATCTGTTCTTCCCTTTCTTTTTCTCAAGATTATATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS CCA 90 bp TTTCTAAAACACGTAATATTCCTGAAATCAAGCCGTCTTGGTCATTaGTCTTTCCACAAGATGAGTGAATATATACTCCTTCTTGTTCAT +
Preference number: 5 (lower is better)
Translates to: FLKHVIFLKSSRLGH*SFHKMSEYILLLVH
Trigger: ATGAACAAGAAGGAGTATATATTCACTCATCTTGTGGAAAGACCAATGACCAAGACGGCTTGATTTCAGGAATATTACGTGTTTTAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000319106.12
ENST00000460818.1
ENST00000462788.6
ENST00000468049.2
ENST00000472611.6
ENST00000474468.5
ENST00000482439.6
ENST00000485960.7
ENST00000491063.5
ENST00000498482.5
ENST00000546932.5
ENST00000549402.5
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAGAAATTTCCATGCTaGCTTTCTCAATGCATGACT +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKKFPC*LSQCMT
Trigger: AGTCATGCATTGAGAAAGCAAGCATGGAAATTTCTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATAAAAATTCTGATGCATTaGGTCCATGTAAGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIKILMH*VHVRGK
Trigger: TTTGCCTCTTACATGGACCAAATGCATCAGAATTTT...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS-3UTR CAA 90 bp CTAGACATGTATCTTAATAATACAGACCAAGGATCTGGAAACAAGCATTCTGAAAAAATTCTGATGCATTaGGTCCATGTAAGAGGCAAA +
Preference number: 5 (lower is better)
Translates to: LDMYLNNTDQGSGNKHSEKILMH*VHVRGK
Trigger: TTTGCCTCTTACATGGACCAAATGCATCAGAATTTT...TTCAGAATGCTTGTTTCCAGATCCTTGGTCTGTATTATTAAGATACATGTCTAG
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000550746.5
CDS-3UTR CAA 90 bp CCAACTCATCCACTTGCAATATTTATCCAATTCCAGTTCATCAGCAAGAAAATATTCCAACTCATCCACTaGCAATATTTATCCAATTCC +
Preference number: 5 (lower is better)
Translates to: PTHPLAIFIQFQFISKKIFQLIH*QYLSNS
Trigger: GGAATTGGATAAATATTGCAAGTGGATGAGTTGGAA...TATTTTCTTGCTGATGAACTGGAATTGGATAAATATTGCAAGTGGATGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485960.7
ENST00000550746.5
CDS CAA 90 bp GGAAGTAGCACCACCTGTCACCAAGCGAATCATCTGTTAAAATTCTaGAATATCTTGCTGATAATGTCGCCTTCCCGCTCACAACACCCG +
Preference number: 6 (lower is better)
Translates to: GSSTTCHQANHLLKF*NILLIMSPSRSQHP
Trigger: CGGGTGTTGTGAGCGGGAAGGCGACATTATCAGCAAGATATTCAAGAATTTTAACAGATGATTCGCTTGGTGACAGGTGGTGCTACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS CAA 72 bp ACCACCTGTCACCAAGCGAATCATCTGTTAAAATTCTaGAATATCTTGCTGATAATGTCGCCTTCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: TTCHQANHLLKF*NILLIMSPSRS
Trigger: TGAGCGGGAAGGCGACATTATCAGCAAGATATTCAAGAATTTTAACAGATGATTCGCTTGGTGACAGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498482.5
CDS GCA 72 bp ATAACCCAGAAGAAATTTCCATGCTTGCTTTCTCAATaGATGACTAAGTCCCTGAAGAAAGCATACATATTA +
Preference number: 6 (lower is better)
Translates to: ITQKKFPCLLSQ*MTKSLKKAYIL
Trigger: TAATATGTATGCTTTCTTCAGGGACTTAGTCATGCATTGAGAAAGCAAGCATGGAAATTTCTTCTGGGTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483828.6
CDS CAA 72 bp CACAGTACTTATCACAGCAAGGCCAAAAACCCAGCTTaGCAAAGATATAACTTCATCAAAAAGAATGTAATG +
Preference number: 6 (lower is better)
Translates to: HSTYHSKAKNPA*QRYNFIKKNVM
Trigger: CATTACATTCTTTTTGATGAAGTTATATCTTTGCAAAGCTGGGTTTTTGGCCTTGCTGTGATAAGTACTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479971.1