RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D14 (Homo sapiens)

Ensembl gene IDs: ENSG00000132405

Ensembl transcript IDs: ENST00000409757.9, ENST00000410031.5, ENST00000427736.1, ENST00000439515.2, ENST00000444368.1, ENST00000446947.6, ENST00000448507.5, ENST00000451522.6, ENST00000467966.1

Found 1041 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCCACTGAACAGGCAGGTGGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: SHCWHKGPPPPHVLF*AAALASTEQAGGRG
Trigger: CCCTCTCCCACCTGCCTGTTCAGTGGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp CGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTGCAGCCTCTACACTGTGACTGTGTC +
Preference number: 1 (lower is better)
Translates to: RRTDAREQSPRAQSH*SPRVHLQPLHCDCV
Trigger: GACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp AGGATGGGTCCAGCTGTGCAGGGCTCAAAGGCAGAGAGGAGCCACTaGTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: RMGPAVQGSKAERSH*WHKGPPPPHVLFWA
Trigger: AGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp GCAGTCCCACTGGAGCCCACGTGTGCACCTGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: AVPLEPTCAPAASTL*LCQGNMAQSSPAGW
Trigger: CCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp GAAGGGCCGTGGAGTGCAGAGCACCCCAAGGCACACATGTACGCATaGCTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: EGPWSAEHPKAHMYA*LTKPVTGSAECSPG
Trigger: TCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp CCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACTGTGACTGTGTCAAGGCAACATGGC +
Preference number: 1 (lower is better)
Translates to: PGSSLPERSPTGAHV*TCSLYTVTVSRQHG
Trigger: GCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp AGGAGTGGGGGTGAGCCACTGCCCATCGTTCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCCGCAGCAGCTCATCCTTCCACTGAG +
Preference number: 1 (lower is better)
Translates to: RSGGEPLPIVQLCSR*SGWLWSAAAHPSTE
Trigger: CTCAGTGGAAGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAGTGGCTCACCCCCACTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp AGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACTGTGTCAAGGCAACATGGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SSLPERSPTGAHVCT*SLYTVTVSRQHGPE
Trigger: CTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCTGGGAGACTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp TGGGAAGGAGGGCACGGGGCAGCCACTGGCTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCC +
Preference number: 1 (lower is better)
Translates to: WEGGHGAATGSATCS*TSRSISGYGRHKKS
Trigger: GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGCCCTCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp TCCCTGGAGATTCAGCTGAGATGTAGGGGCAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGAAGGAGGGCACGGGGCAGCCACTGG +
Preference number: 1 (lower is better)
Translates to: SLEIQLRCRGRVRET*HMIVLGRRARGSHW
Trigger: CCAGTGGCTGCCCCGTGCCCTCCTTCCCAGCACTATCATGTGTCACGTTTCCCGGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp CGTGTGCACCTGCAGCCTCTACACTGTGACTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGGTATCCA +
Preference number: 1 (lower is better)
Translates to: RVHLQPLHCDCVKAT*PRAHLQAGSMPRYP
Trigger: TGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp GGTGAGCCACTGCCCATCGTTCAACTGTGCAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCTCATCCTTCCACTGAGCTGCTTAAG +
Preference number: 1 (lower is better)
Translates to: GEPLPIVQLCSRCSG*LWSAAAHPSTELLK
Trigger: CTTAAGCAGCTCAGTGGAAGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAGTGGCTCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp AAACTTAAAGAGCGTCTGTTCTTCTCGGCTGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCGGCATGGGGCTCTGATTGGTGCCGA +
Preference number: 1 (lower is better)
Translates to: KLKERLFFSAARVSV*NNRGAAAWGSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGACGCTCTTTAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp GTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACACACATCAGTGGCCATCCTCAGAGAG +
Preference number: 1 (lower is better)
Translates to: VSRQHGPELTCRLGR*PGIHKHTSVAILRE
Trigger: CTCTCTGAGGATGGCCACTGATGTGTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp CCACTGCCCATCGTTCAACTGTGCAGCAGATGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCTTCCACTGAGCTGCTTAAGGCTAAG +
Preference number: 1 (lower is better)
Translates to: PLPIVQLCSRCSGWL*SAAAHPSTELLKAK
Trigger: CTTAGCCTTAAGCAGCTCAGTGGAAGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp CCTCCGAGAGGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCAGCCTCCCTGGAGATTCAGCTGAGA +
Preference number: 1 (lower is better)
Translates to: PPRGGESAFKGRGRK*SPRCSAASLEIQLR
Trigger: TCTCAGCTGAATCTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCCTCTCGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 90 bp CTCTACACTGTGACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCAGGTATCCACAAACACACATCAGTG +
Preference number: 1 (lower is better)
Translates to: LYTVTVSRQHGPELT*RLGRCPGIHKHTSV
Trigger: CACTGATGTGTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 90 bp CCTGCAGGCTGGGTCGATGCCCAGGTATCCACAAACACACATCAGTaGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGT +
Preference number: 1 (lower is better)
Translates to: PAGWVDAQVSTNTHQ*PSSESPCSFNAIFR
Trigger: ACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp GTCTGTACAACGGGTCATGAAGCACACGTTCTAAAGTCAAATGTGTaGGGGACTCACTGGCACTTAGGATGGGTCCAGCTGTGCAGGGCT +
Preference number: 1 (lower is better)
Translates to: VCTTGHEAHVLKSNV*GTHWHLGWVQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTGAGTCCCTCACACATTTGACTTTAGAACGTGTGCTTCATGACCCGTTGTACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp CTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTCAAATGTGTGAGGGACTCACTGGCA +
Preference number: 1 (lower is better)
Translates to: LLDVCCSLLRLYNGS*STRSKVKCVRDSLA
Trigger: TGCCAGTGAGTCCCTCACACATTTGACTTTAGAACGTGTGCTTCATGACCCGTTGTACAGACGGAGGAGCGAGCAACACACGTCTAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 90 bp AGTAAGAAAATATATACATCTTTAAGGAACGGAACGCCCGTAACATaGACAAAAATAAGTACATCTGCGAGGACAACAGCGCACAGGCCT +
Preference number: 1 (lower is better)
Translates to: SKKIYTSLRNGTPVT*TKISTSARTTAHRP
Trigger: AGGCCTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTTGTTCATGTTACGGGCGTTCCGTTCCTTAAAGATGTATATATTTTCTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: SAGPMPGSSLPERSPTGASRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGG +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDSPGPA*QRTATW
Trigger: CCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 2 (lower is better)
Translates to: KPVTGSAECSPGPACQRTLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGRRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGG +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECSPGPA*QRTATW
Trigger: CCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCTGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 2 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGATTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGTCCAGAGAACGAATaGCAGCTCGGCTTTCCTTCC +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLSPENE*QLGFPS
Trigger: GGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLASPGPA*QRTATW
Trigger: CCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDRRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARRNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCTCTGTTCTTCTCGGCTaGCCGGGTGTCAGTCTGAAA +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPSVLLG*PGVSLK
Trigger: TTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGA...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFRRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCACGGGGCAGCCACTaGCTCAGCAACCTGCTCCTG +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQARGSH*LSNLLL
Trigger: CAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATCCCCAGGGGCAATCTaGACACACTGCACGAGGCCC +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLASPGAI*THCTRP
Trigger: GGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACGCAGGGCTGGGCGCTaGAGACACAGAAGATCCCCA +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLARRAGR*RHRRSP
Trigger: TGGGGATCTTCTGTGTCTTCAGCGCCCAGCCCTGCG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACATACAAGCCACTTCTaGACTAAGATTGGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGHTSHF*TKIGKV
Trigger: CACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTGCCAACAGCCTCTGTaGCGAGGTGTTAAGGGACCC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFCQQPL*RGVKGP
Trigger: GGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 2 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 2 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CAA 90 bp GCTAAAATGGGGAGGCTGATGGTCCAGTATGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: AKMGRLMVQYEHLTR*SRLLDVCCSLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAGATGCTCATACTGGACCATCAGCCTCCCCATTTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CAA 90 bp ACAGAAGATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGTAC +
Preference number: 2 (lower is better)
Translates to: TEDPQGQSEHTARGP*PRHLLYDLRNIFMY
Trigger: GTACATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATCTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCCCTGGAGATTCAGCTaGGATGTAGGGGCAGAGTCC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQPWRFS*DVGAES
Trigger: GGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFTSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLARNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CAA 90 bp CATGTGACCCCTGAACAGGTCATACAAGCCACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTGGCATGGGATCCTGTTCAGAAGCGG +
Preference number: 2 (lower is better)
Translates to: HVTPEQVIQATSELR*GRCSTLAWDPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTGTTCAGGGGTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: STLANSLCAEVLRDPGRGNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 2 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: AGMAGIKSPENECQLGFPILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQSATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 2 (lower is better)
Translates to: SSSGKTISITQSAIPFLSRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: PRGALAGMAGIKSPENECLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 2 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: THVRMTNQARDRVRRMLPNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 2 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLALLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLALDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: SSSGKTISITQSAIPFLSSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: SCTSRSISGYGRHKKSREICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: SSSGKTISITQSAIPFLSQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 2 (lower is better)
Translates to: VECADLWRSSTSMSHFQFRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 2 (lower is better)
Translates to: YGRHKKSRERMPARLSFPNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLAKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 2 (lower is better)
Translates to: QVIQATSELRLGRCSTLARDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 2 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGGGCCCTGCTTCCAGAC +
Preference number: 3 (lower is better)
Translates to: VTGSAECSPGPA*QRTATWALLPD
Trigger: GTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCCTGGCCTCCACTGAAC +
Preference number: 3 (lower is better)
Translates to: ATAGTRGHLPHM*CSGLLPWPPLN
Trigger: GTTCAGTGGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 3 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GGGCACGGGGCAGCCACTGGCTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGCGGGTATGGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: GHGAATGSATCS*TSRSISGYGRH
Trigger: ATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GAAGGAGGGCACGGGGCAGCCACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGCATTAGCGGGTATGGC +
Preference number: 3 (lower is better)
Translates to: EGGHGAATGSAT*SCTSRSISGYG
Trigger: GCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGCCCTCCTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp CTCCTCCTCTCGAACTTTCCACCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTG +
Preference number: 3 (lower is better)
Translates to: LLLSNFPPPQDR*QGAVSQSAVPL
Trigger: CAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGGTGGAAAGTTCGAGAGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp GATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTGCAGCCTCTACACTGT +
Preference number: 3 (lower is better)
Translates to: DAREQSPRAQSH*SPRVHLQPLHC
Trigger: ACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp GAGCGTCTGTTCTTCTCGGCTGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCGGCATGGGGCTCTGAT +
Preference number: 3 (lower is better)
Translates to: ERLFFSAARVSV*NNRGAAAWGSD
Trigger: ATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp AGGAGTGGGGGTGAGCCACTGCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGGCTGTGGTCCGCAGCA +
Preference number: 3 (lower is better)
Translates to: RSGGEPLPIVQL*SRCSGWLWSAA
Trigger: TGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAGTGGCTCACCCCCACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp ATGATAGTGCTGGGAAGGAGGGCACGGGGCAGCCACTaGCTCAGCAACCTGCTCCTGCACCTCGAGGAGCAT +
Preference number: 3 (lower is better)
Translates to: MIVLGRRARGSH*LSNLLLHLEEH
Trigger: ATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGCCCTCCTTCCCAGCACTATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 3 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLTARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GGTGAGCCACTGCCCATCGTTCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCCGCAGCAGCTCATCCT +
Preference number: 3 (lower is better)
Translates to: GEPLPIVQLCSR*SGWLWSAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAGTGGCTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp CTGGGGTGGGAAGTGTGGCTGAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACACATGTACGCATGACT +
Preference number: 3 (lower is better)
Translates to: LGWEVWLRRAVE*RAPQGTHVRMT
Trigger: AGTCATGCGTACATGTGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp CTGCAGCCTCTACACTGTGACTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCC +
Preference number: 3 (lower is better)
Translates to: LQPLHCDCVKAT*PRAHLQAGSMP
Trigger: GGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp CTGGAGCCCACGTGTGCACCTGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATGGCCCAGAGCTCACCT +
Preference number: 3 (lower is better)
Translates to: LEPTCAPAASTL*LCQGNMAQSSP
Trigger: AGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp TGGAGTGCAGAGCACCCCAAGGCACACATGTACGCATaGCTAACCAAGCCCGTGACCGGGTCCGCAGAATGC +
Preference number: 3 (lower is better)
Translates to: WSAEHPKAHMYA*LTKPVTGSAEC
Trigger: GCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGCCTTGGGGTGCTCTGCACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp CCAGAGCGCAGTCCCACTGGAGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACTGTGTCAAGGCAACAT +
Preference number: 3 (lower is better)
Translates to: PERSPTGAHVCT*SLYTVTVSRQH
Trigger: ATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp CTGCCCATCGTTCAACTGTGCAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCTCATCCTTCCACTGAG +
Preference number: 3 (lower is better)
Translates to: LPIVQLCSRCSG*LWSAAAHPSTE
Trigger: CTCAGTGGAAGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCTGCACAGTTGAACGATGGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp GGGACCCTGGCCGGGGACTCAGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAGGAAACTGGCGAGACC +
Preference number: 3 (lower is better)
Translates to: GTLAGDSELRTF*PLKRTQETGET
Trigger: GGTCTCGCCAGTTTCCTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTCTGAGTCCCCGGCCAGGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 3 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp CAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACACACATCAGTGGCCATC +
Preference number: 3 (lower is better)
Translates to: QHGPELTCRLGR*PGIHKHTSVAI
Trigger: GATGGCCACTGATGTGTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR GCA 72 bp GTGACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCAGGTATCCACAAACAC +
Preference number: 3 (lower is better)
Translates to: VTVSRQHGPELT*RLGRCPGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGATTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: STLANSLCAEVLRDPGRGLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 3 (lower is better)
Translates to: HVRMTNQARDRVRRMLPREHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp TGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCCACAAACACACATCAG +
Preference number: 3 (lower is better)
Translates to: CQGNMAQSSPAG*VDAQVSTNTHQ
Trigger: CTGATGTGTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCAGCCTCCCTGGAGATT +
Preference number: 3 (lower is better)
Translates to: GGESAFKGRGRK*SPRCSAASLEI
Trigger: AATCTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTG +
Preference number: 3 (lower is better)
Translates to: STLANSLCAEVLRDPGRGTSELR*GRCSTL
Trigger: CAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 3 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 3 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSEHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp ACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTaGTGTCAGGAAATGGCTACGTCTGGAGGCCACCGG +
Preference number: 3 (lower is better)
Translates to: TGPAQTRLHSTS*CQEMATSGGHR
Trigger: CCGGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: PRGALAGMAGIKSPENECLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: SCTSRSISGYGRHKKSRELSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 3 (lower is better)
Translates to: QVIQATSELRLGRCSTLAAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp GTGTGTTGCTCGCTCCTCCGTCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTCAAATGTGTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: VCCSLLRLYNGS*STRSKVKCVRD
Trigger: GTCCCTCACACATTTGACTTTAGAACGTGTGCTTCATGACCCGTTGTACAGACGGAGGAGCGAGCAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CCA 72 bp GAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTT +
Preference number: 3 (lower is better)
Translates to: ESTACEVECADL*RSSTSMSHFQF
Trigger: AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp AGAAGCGGAATACATCGTAGTGCTATCTGGAGAGACTaGTGTGAAACTGCTTCACCAGGAACACGCAGGGCT +
Preference number: 3 (lower is better)
Translates to: RSGIHRSAIWRD*CETASPGTRRA
Trigger: AGCCCTGCGTGTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 3 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQEHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTG +
Preference number: 3 (lower is better)
Translates to: VECADLWRSSTSMSHFQFTSELR*GRCSTL
Trigger: CAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: VECADLWRSSTSMSHFQFFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: SCTSRSISGYGRHKKSREFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 3 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 3 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR TCA 72 bp ATATATACATCTTTAAGGAACGGAACGCCCGTAACATaGACAAAAATAAGTACATCTGCGAGGACAACAGCG +
Preference number: 3 (lower is better)
Translates to: IYTSLRNGTPVT*TKISTSARTTA
Trigger: CGCTGTTGTCCTCGCAGATGTACTTATTTTTGTTCATGTTACGGGCGTTCCGTTCCTTAAAGATGTATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGAGGCCCGCTCGGGGATaGGGTCGGAGTCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVRPARG*GRSRTA
Trigger: AGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTSPGPA*QRTATW
Trigger: CCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTCCCCAGGACCAGCCTaGCAGCGGACCGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLSPGPA*QRTATW
Trigger: CCACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCGCAGGGCTGGGCGCTaGAGACACAGAAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVRRAGR*RHRRSP
Trigger: TGGGGATCTTCTGTGTCTTCAGCGCCCAGCCCTGCG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCAGGCCCGCTCGGGGATaGGGTCGGAGTCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLRPARG*GRSRTA
Trigger: AGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCTGCTAGGAGCTGGTaGCGCACAGGATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTAARSW*RTGWQR
Trigger: GCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGATGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTCACGTGGACCGCGCTaGAGGGTACAGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLSRGPR*RVQAPG
Trigger: ACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGCACGGGGCAGCCACTaGCTCAGCAACCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLARGSH*LSNLLL
Trigger: CAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGCTGCTAGGAGCTGGTaGCGCACAGGATGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLAARSW*RTGWQR
Trigger: GCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGTCCAAGGAGAAACTaGTCGGCTCCACCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGPRRN*SAPPAA
Trigger: GGCTGCGGGTGGAGCCGACCAGTTTCTCCTTGGACC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448507.5
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTRRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGALGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLLGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCCCGAGTCCACGGACTaGAGGCTGTGCCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAPESTD*RLCRSS
Trigger: AGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGCGCGCAGGCGCTCTaGAAGGCCCGCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLSAQAL*KARSGM
Trigger: CATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGGTGCTGCTAGGAGCTaGTGGCGCACAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLGAARS*WRTGWQ
Trigger: CTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCCCTGGAGATTCAGCTaGGATGTAGGGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTPWRFS*DVGAES
Trigger: GGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCCCTCCTCAGCTTCATaGACACAGTCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVPSSAS*TQSCWC
Trigger: ACACCAGCAGGACTGTGTTCATGAAGCTGAGGAGGG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVVLEDE*GGGKWF
Trigger: GAACCACTTTCCACCACCGCACTCATCCTCGAGGAC...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCAGTGCGAATTCCCGCTaGAGCCTCAGTGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLSANSR*SLSVGG
Trigger: CCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGARRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGCAGCCTCTACACTTaGCAACAGCCTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGSLYT*QQPLCR
Trigger: TCGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTRNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCTGTCCTGGGAAACGTaGAGGATTTGCGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVLSWET*RICARS
Trigger: AGAGCGTGCGCAAATCCTCCACGTTTCCCAGGACAG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLVCPRG*VRWWKV
Trigger: CACTTTCCACCACCGCACTCATCCTCGAGGACAGAC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAVCPRG*VRWWKV
Trigger: CACTTTCCACCACCGCACTCATCCTCGAGGACAGAC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVTSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCACGTGTTGCAGGTTCTaGAGGGGGTTTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTTCCRF*RGFPGR
Trigger: TCGACCAGGAAACCCCCTTCAGAACCTGCAACACGT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGTCTTCTAAAGCCCTaGGTTTCAGCTTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGLLKP*VSAWAR
Trigger: ACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTVLEDE*GGGKWF
Trigger: GAACCACTTTCCACCACCGCACTCATCCTCGAGGAC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLLIGAE*EFPLQP
Trigger: AGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTTTGCCTCTCACACTTaGAGGGATTCCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVFASHT*RDSLPP
Trigger: TGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCACCGCCACCTCTCCTTaGCTCGGGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLTATSP*LGQDRC
Trigger: ACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGT...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCTCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGASGSWR*RQTAPR
Trigger: CCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGA...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGCACGGGGCAGCCACTaGCTCAGCAACCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLARGSH*LSNLLL
Trigger: CAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGC...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLRNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCAGCCATCTTGGAAGTaGGAAGCGGCCGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLQPSWK*EAAGRG
Trigger: CCCCCTCCCGGCCGCTTCCCACTTCCAAGATGGCTG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448507.5
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGCCCGGGTGTCAGTCTaGAACAACAGAGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPARVSV*NNRGAA
Trigger: CGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTGGCGAGACCTCATGTaGCCCCTGAACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLWRDLM*PLNRSY
Trigger: GTATGACCTGTTCAGGGGTCACATGAGGTCTCGCCA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCTAAGCTCCAGACTTTaGCTCTCACACTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVLSSRL*LSHLEG
Trigger: TCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGASATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLSATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTPHILL*RGWLAR
Trigger: CCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTGCTGGGAGATTTGCTaGTCTGTCCTCGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTCWEIC*SVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGAGAGGAGCCACTGCTaGCACAAGGGGCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRERSHC*HKGPPP
Trigger: GGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGCACGGGGCAGCCACTaGCTCAGCAACCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGARGSH*LSNLLL
Trigger: CAGGAGCAGGTTGCTGAGCCAGTGGCTGCCCCGTGC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATG +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLECADL*RSSTSM
Trigger: CATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCTGTGCAACATGTCATaGTATGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCATATCATGACATGTTGCACAG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTRNWAM*MKSILV
Trigger: GACCAAGATGGACTTCATTCACATGGCCCAGTTCCT...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATCCCCAGGGGCAATCTaGACACACTGCACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPSPGAI*THCTRP
Trigger: GGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCGCAGGGCTGGGCGCTaGAGACACAGAAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRRRAGR*RHRRSP
Trigger: TGGGGATCTTCTGTGTCTTCAGCGCCCAGCCCTGCG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTGCTTTCCTCGACTCTaGATCTTTCTTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVCFPRL*IFLPAA
Trigger: AGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCACAGCGTTTCCAATaGTTTCCTCGACTCTGCATC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTAQRFQ*FPRLCI
Trigger: GATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCTTGGAGGGATTCCCTaGCACCATAAATCTCGAACT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVLGGIP*HHKSRT
Trigger: AGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCTGTCTTTCTGCAATaGAGTCAGTACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTAVFLQ*SQYLSP
Trigger: TGGGCTCAGGTACTGACTGCATTGCAGAAAGACAGC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGTGCGAATTCCCGCTaGAGCCTCAGTGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLSANSR*SLSVGG
Trigger: CCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGATNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGAAGGTGTTCCACACTaGCATGGGATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTEGVPH*HGILFR
Trigger: TCTGAACAGGATCCCATGCCAGTGTGGAACACCTTC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLVCPRG*VRWWKV
Trigger: CACTTTCCACCACCGCACTCATCCTCGAGGACAGAC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTCAACACTGCTGCTATaGAGGACATGCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLSTLLL*RTCPGH
Trigger: ATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCTCAACACTGCTGCTATaGAGGACATGCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGASTLLL*RTCPGH
Trigger: ATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGA...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCAATGCAGTCAGTACCTaGGCCCACTTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLNAVST*AHFLFR
Trigger: CCGAAACAAGAAGTGGGCTCAGGTACTGACTGCATT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCGCAGGGCTGGGCGCTaGAGACACAGAAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPRRAGR*RHRRSP
Trigger: TGGGGATCTTCTGTGTCTTCAGCGCCCAGCCCTGCG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGCACAGCGTTTCCAATaGTTTCCTCGACTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLAQRFQ*FPRLCI
Trigger: GATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCTAAGCTCCAGACTTTaGCTCTCACACTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLLSSRL*LSHLEG
Trigger: TCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCTAAGCTCCAGACTTTaGCTCTCACACTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGALSSRL*LSHLEG
Trigger: TCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAAGTGCGAATTCCCGCTaGAGCCTCAGTGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPSANSR*SLSVGG
Trigger: CCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTGCCAACAGCCTCTGTaGCGAGGTGTTAAGGGACCC +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLCQQPL*RGVKGP
Trigger: GGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTCAGCTCTCGCTTTTTaGCCTGAACCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVSALAF*PEPPFL
Trigger: AAGAAATGGTGGTTCAGGCCAAAAAGCGAGAGCTGA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACCCGAGTCCACGGACTaGAGGCTGTGCCGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLPESTD*RLCRSS
Trigger: AGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTAGCGCGCAGGCGCTCTaGAAGGCCCGCTCGGGGATG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPSAQAL*KARSGM
Trigger: CATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTGGTGGCGCACAGGATaGCAGCGCGCAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDWWRTG*QRAGAL
Trigger: CAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCGGTGCTGCTAGGAGCTaGTGGCGCACAGGATGGCAG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPGAARS*WRTGWQ
Trigger: CTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACC...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGCAAGTTCCTGTCCATaGACAGGAGCGCAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRASSCP*TGAQGR
Trigger: TCTCCCCTGCGCTCCTGTTCATGGACAGGAACTTGC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCTTCTGTATTCTCTTTaGATCCTTCTGGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVLLYSL*ILLGIL
Trigger: GAGAATGCCCAGAAGGATTCAAAGAGAATACAGAAG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTGCTGTCTGTGCTTCTaGGCTTCTTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLCCLCF*ASSAGF
Trigger: AAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACCCTGGAGATTCAGCTaGGATGTAGGGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPPWRFS*DVGAES
Trigger: GGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTGGCGAGACCTCATGTaGCCCCTGAACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLWRDLM*PLNRSY
Trigger: GTATGACCTGTTCAGGGGTCACATGAGGTCTCGCCA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGATGTCCTCATTGCTaGCGGACAGCGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLRCPHC*RTAWWT
Trigger: TGTCCACCACGCTGTCCGTCAGCAATGAGGACATCT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTTCTTCCTCACATTCTaGTTTGGAGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLFFLTF*FGEGGL
Trigger: CAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLVLEDE*GGGKWF
Trigger: GAACCACTTTCCACCACCGCACTCATCCTCGAGGAC...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTGCTTTCCTCGACTCTaGATCTTTCTTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLCFPRL*IFLPAA
Trigger: AGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCCTTGGAGGGATTCCCTaGCACCATAAATCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGALGGIP*HHKSRT
Trigger: AGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAG...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCAAGATCAACACTGCTaGTATGAAGGACATGCCCTG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLQDQHC*YEGHAL
Trigger: CAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCGAACAGCTTCAGGATaGCCAGGGCCGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPRTASG*PGPCGT
Trigger: TGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRLIGAE*EFPLQP
Trigger: AGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLSATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGGCAGCCTCTACACTTaGCAACAGCCTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPGSLYT*QQPLCR
Trigger: TCGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCGGAGACATCATCGCTaGGGGTCAGGGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPRRHHR*GSGLWR
Trigger: CCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAACCGCCACCTCTCCTTaGCTCGGGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPTATSP*LGQDRC
Trigger: ACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGACATAACCCACATCTaGCCGGTAACAAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTDITHI*PVTSIS
Trigger: GCTTATACTTGTTACCGGCCAGATGTGGGTTATGTC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRSGSWR*RQTAPR
Trigger: CCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTTTCGGCTCTGCATCTaGATCGTGGCGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLFRLCI*IVAMEA
Trigger: TGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLECADL*RSSTSM
Trigger: CATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATGCTTCCTCCTCACGTaGACCGCGCTGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLCFLLT*TALQGT
Trigger: TGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTGGTGGCGCACAGGATaGCAGCGCGCAGGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPWWRTG*QRAGAL
Trigger: CAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCTTCTGTATTCTCTTTaGATCCTTCTGGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTLLYSL*ILLGIL
Trigger: GAGAATGCCCAGAAGGATTCAAAGAGAATACAGAAG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLVCPRG*VRWWKV
Trigger: CACTTTCCACCACCGCACTCATCCTCGAGGACAGAC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTCCCCAGGGGCAATCTaGACACACTGCACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSSPGAI*THCTRP
Trigger: GGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTAGTGCGAATTCCCGCTaGAGCCTCAGTGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSANSR*SLSVGG
Trigger: CCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCCGCCACGTGGGCCCTaGTTCCAGACACTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYPPRGP*FQTLAC
Trigger: GCAGGCCAGTGTCTGGAAGCAGGGCCCACGTGGCGG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGAAACGTGGAGGATTTaGGCACGCTCTGTTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRETWRI*ARSVPA
Trigger: AGCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTGCTGGGAGATTTGCTaGTCTGTCCTCGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLCWEIC*SVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTCAGCTCTCGCTTTTTaGCCTGAACCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLSALAF*PEPPFL
Trigger: AAGAAATGGTGGTTCAGGCCAAAAAGCGAGAGCTGA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTTTGCCTCTCACACTTaGAGGGATTCCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLFASHT*RDSLPP
Trigger: TGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTTAACTCGTTGCCAATaGCTAAGCTCCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLLTRCQ*LSSRLC
Trigger: GCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTATGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGACATAACCCACATCTaGCCGGTAACAAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLDITHI*PVTSIS
Trigger: GCTTATACTTGTTACCGGCCAGATGTGGGTTATGTC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTTCTGCATCTGGATCGTaGCGATGGAGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLSASGS*RWRQTA
Trigger: AGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGA...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGATTTCGGCTCTGCATCTaGATCGTGGCGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGFRLCI*IVAMEA
Trigger: TGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTAGAGGGGCCGCGGCATaGGGCTCTGATTGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSRGAAA*GSDWCR
Trigger: TCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARCSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTGTTCCACACTGGCATaGGATCCTGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLCSTLA*DPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPECADL*RSSTSM
Trigger: CATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATGCGGGTCAGGGCTTTaGAGGTCGGGCTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLCGSGL*RSGYRA
Trigger: AGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCCTTCTGTATTCTCTTTaGATCCTTCTGGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLLLYSL*ILLGIL
Trigger: GAGAATGCCCAGAAGGATTCAAAGAGAATACAGAAG...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTCAACACTGCTGCTATaGAGGACATGCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLSTLLL*RTCPGH
Trigger: ATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAATGCAGTCAGTACCTaGGCCCACTTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLNAVST*AHFLFR
Trigger: CCGAAACAAGAAGTGGGCTCAGGTACTGACTGCATT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAAT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSRGMGL*LVPSAN
Trigger: ATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGGTGGGAAGTGTGGCTaGGAAGGGCCGTGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYGGKCG*EGPWSA
Trigger: TGCACTCCACGGCCCTTCTCAGCCACACTTCCCACC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRTSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCACGGACTCTCCCCGTaGCGCATTCCTGGCACGCCA +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFHGLSP*RIPGTP
Trigger: TGGCGTGCCAGGAATGCGGCACGGGGAGAGTCCGTG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARLIGAE*EFPLQP
Trigger: AGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATCTGTTCTTCTCGGCTaGCCGGGTGTCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPSVLLG*PGVSLK
Trigger: TTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCACCGGGTCCGCAGAATaGTCCCCAGGACCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECTGSAE*SPGPAC
Trigger: GCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTACGGACTGGAGGCTGTaGCGGTCTTCTAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARTDWRL*RSSKAL
Trigger: CAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAGGTCGGAGTCGGACTaGTTCCTCCTCACGTGGACC +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDRSESD*FLLTWT
Trigger: GGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATCGGAGACATCATCGCTaGGGGTCAGGGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDRRHHR*GSGLWR
Trigger: CCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCG...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACTGCTTTGGAGAGGGTaGCTTGCTAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLLLWRG*LARSSS
Trigger: GCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGPHILL*RGWLAR
Trigger: CCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCTATGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATA...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCAACATGTCATGATATaGACCACCTTGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: KPVTGSAECSPGPACQRTQHVMI*TTLLEN
Trigger: ATTTTCCAGCAAGGTGGTCCATATCATGACATGTTG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACAACGGCATGTGAAGTaGAGTGTGCAGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPQRHVK*SVQTSG
Trigger: TCCAGAGGTCTGCACACTCCACTTCACATGCCGTTG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCACCCGCAGCCATCTTaGAAGTGGGAAGCGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFHPQPS*KWEAAG
Trigger: CCCGGCCGCTTCCCACTTCCAAGATGGCTGCGGGTG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448507.5
3UTR CAA 72 bp CCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTACGACTTAAGGAACATC +
Preference number: 4 (lower is better)
Translates to: PQGQSEHTARGP*PRHLLYDLRNI
Trigger: GATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTGCTGTCTGTGCTTCTaGGCTTCTTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLCCLCF*ASSAGF
Trigger: AAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCTGTGCAACATGTCATaGTATGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCATATCATGACATGTTGCACAG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPRNWAM*MKSILV
Trigger: GACCAAGATGGACTTCATTCACATGGCCCAGTTCCT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAATGCAGTCAGTACCTaGGCCCACTTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGNAVST*AHFLFR
Trigger: CCGAAACAAGAAGTGGGCTCAGGTACTGACTGCATT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCTCCGAGGGGCCGGCTaGAGAAGCACGGACTCTCCC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQLRGAG*RSTDSP
Trigger: GGGAGAGTCCGTGCTTCTGCAGCCGGCCCCTCGGAG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGHLSSS*FFLRWA
Trigger: AGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATG...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGCACAGCGTTTCCAATaGTTTCCTCGACTCTGCATC +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRAQRFQ*FPRLCI
Trigger: GATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCTAAGCTCCAGACTTTaGCTCTCACACTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRLSSRL*LSHLEG
Trigger: TCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCAAGATCAACACTGCTaGTATGAAGGACATGCCCTG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLQDQHC*YEGHAL
Trigger: CAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTTCTTGTTTCGGCTCTaGATCTGGATCGTGGCGATG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRFLFRL*IWIVAM
Trigger: CATCGCCACGATCCAGATGCAGAGCCGAAACAAGAA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGCTGTCTTTCTGCAATaGAGTCAGTACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRAVFLQ*SQYLSP
Trigger: TGGGCTCAGGTACTGACTGCATTGCAGAAAGACAGC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGCTGTCTTTCTGCAATaGAGTCAGTACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGAVFLQ*SQYLSP
Trigger: TGGGCTCAGGTACTGACTGCATTGCAGAAAGACAGC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCT +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDWGSDW*RVRIPA
Trigger: AGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGGGCCCAGAGCTCACCTaGAGGCTGGGTCGATGCCCA +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRGPELT*RLGRCP
Trigger: TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCC...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTACTGGCTCAGCAACCTaGTCCTGCACCTCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSTGSAT*SCTSRS
Trigger: GCTCCTCGAGGTGCAGGAGCAGGTTGCTGAGCCAGT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPPHILL*RGWLAR
Trigger: CCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTTCAGCTGGTTTTGCTaGGAGATTTGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLFSWFC*EICWSV
Trigger: GACAGACCAGCAAATCTCCCAGCAAAACCAGCTGAA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCATGTCAAAGAGCTCGTaGGTGATATTTAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLMSKSS*VIFNSL
Trigger: CAACGAGTTAAATATCACCCACGAGCTCTTTGACAT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCAACATGTCATGATATaGACCACCTTGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLQHVMI*TTLLEN
Trigger: ATTTTCCAGCAAGGTGGTCCATATCATGACATGTTG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSSGSWR*RQTAPR
Trigger: CCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCTGTTCCACACTGGCATaGGATCCTGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPCSTLA*DPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACA...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGAAGGTGTTCCACACTaGCATGGGATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPEGVPH*HGILFR
Trigger: TCTGAACAGGATCCCATGCCAGTGTGGAACACCTTC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAAGTCATAGCCTGTCCTaGGAAACGTGGAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPSHSLS*ETWRIC
Trigger: GCAAATCCTCCACGTTTCCCAGGACAGGCTATGACT...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAAGTCATAGCCTGTCCTaGGAAACGTGGAGGATTTGC +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGSHSLS*ETWRIC
Trigger: GCAAATCCTCCACGTTTCCCAGGACAGGCTATGACT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTCAAAGAGCTCGTGGGTaGTATTTAACTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLQRARG*YLTRCQ
Trigger: TTGGCAACGAGTTAAATATCACCCACGAGCTCTTTG...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLTGPCE*SPSWSG
Trigger: TCCTGACCAAGATGGACTTCATTCACATGGCCCAGT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCCCTGGAGATTCAGCTaGGATGTAGGGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPPWRFS*DVGAES
Trigger: GGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTCCCCAGGGGCAATCTaGACACACTGCACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRSPGAI*THCTRP
Trigger: GGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCGCAGGGCTGGGCGCTaGAGACACAGAAGATCCCCA +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRRRAGR*RHRRSP
Trigger: TGGGGATCTTCTGTGTCTTCAGCGCCCAGCCCTGCG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCACTGGAGCTGCTCGTaGCCACAAGGTCCAAGATGT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSHWSCS*PQGPRC
Trigger: ACATCTTGGACCTTGTGGTCACGAGCAGCTCCAGTG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCGAACAGCTTCAGGATaGCCAGGGCCGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECRTASG*PGPCGT
Trigger: TGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCTTCTTGTTTCGGCTCTaGATCTGGATCGTGGCGATG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPFLFRL*IWIVAM
Trigger: CATCGCCACGATCCAGATGCAGAGCCGAAACAAGAA...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATTCTTGTTTCGGCTCTaGATCTGGATCGTGGCGATG +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLFLFRL*IWIVAM
Trigger: CATCGCCACGATCCAGATGCAGAGCCGAAACAAGAA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATAGTGCGAATTCCCGCTaGAGCCTCAGTGTCGGAGGG +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYSANSR*SLSVGG
Trigger: CCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYLIGAE*EFPLQP
Trigger: AGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTGTGGGGGTGAGCCACTaGCCATCGTTCAACTGTGCA +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSVGVSH*PSFNCA
Trigger: TGCACAGTTGAACGATGGGCAGTGGCTCACCCCCAC...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACACTGGAGCCCACGTGTaGACCTGCAGCCTCTACACT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYTGAHV*TCSLYT
Trigger: AGTGTAGAGGCTGCAGGTGCACACGTGGGCTCCAGT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTCCAGACACTGGCCTaGCCTTTAGACTGCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFQTLA*PLDCAA
Trigger: AGCTGCGCAGTCTAAAGGGCAGGCCAGTGTCTGGAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAAGAAGGGCCGTGGAGTaGAGAGCACCCCAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRERRAVE*RAPQGT
Trigger: TGTGCCTTGGGGTGCTCTGCACTCCACGGCCCTTCT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCTGCACGAGGCCCTTTaGCGCGCCACCTTCTGTACG +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRLHEAL*RATFCT
Trigger: CGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTACGGACTGGAGGCTGTaGCGGTCTTCTAAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPTDWRL*RSSKAL
Trigger: CAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCCTCTTTGAATCCTTCTaGGCATTCTCTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPLFESF*AFSRSG
Trigger: GCCACTCCGAGAGAATGCCCAGAAGGATTCAAAGAG...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTGCTTCTTCCTTCGCTaGGCTTCTTTCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARCFFLR*ASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPSGSWR*RQTAPR
Trigger: CCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTCTGCATCTGGATCGTaGCGATGGAGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSASGS*RWRQTA
Trigger: AGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTTCGGCTCTGCATCTaGATCGTGGCGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFRLCI*IVAMEA
Trigger: TGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRECSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCAGCGGACCGCCACGTaGGCCCTGCTTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQQRTAT*ALLPDT
Trigger: AGTGTCTGGAAGCAGGGCCCACGTGGCGGTCCGCTG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSRNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRELRTF*PLKRTQ
Trigger: CTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATTGCTTCCTCCTCACGTaGACCGCGCTGCAGGGTACA +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYCFLLT*TALQGT
Trigger: TGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCA...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGACGTTGGTAAACTGTaGGTCATCGTCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRDVGKL*VIVILQ
Trigger: CTGGAGAATGACGATGACCCACAGTTTACCAACGTC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAGACGTTGGTAAACTGTaGGTCATCGTCATTCTCCAG +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGDVGKL*VIVILQ
Trigger: CTGGAGAATGACGATGACCCACAGTTTACCAACGTC...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCTGTGCAACATGTCATaGTATGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCATATCATGACATGTTGCACAG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACCCTGGAGATTCAGCTaGGATGTAGGGGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSREPWRFS*DVGAES
Trigger: GGACTCTGCCCCTACATCTCAGCTGAATCTCCAGGG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTCCCCAGGGGCAATCTaGACACACTGCACGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQSPGAI*THCTRP
Trigger: GGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCATACAAGCCACTTCTaGACTAAGATTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRHTSHF*TKIGKV
Trigger: CACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACATACAAGCCACTTCTaGACTAAGATTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPHTSHF*TKIGKV
Trigger: CACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSTSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTGGCGAGACCTCATGTaGCCCCTGAACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPWRDLM*PLNRSY
Trigger: GTATGACCTGTTCAGGGGTCACATGAGGTCTCGCCA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTGGCGAGACCTCATGTaGCCCCTGAACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYWRDLM*PLNRSY
Trigger: GTATGACCTGTTCAGGGGTCACATGAGGTCTCGCCA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTGGTCTTCTAAAGCCCTaGGTTTCAGCTTGGGCCCGT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSGLLKP*VSAWAR
Trigger: ACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACC...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPFFSWF*WEICWS
Trigger: AGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARHLSSS*FFLRWA
Trigger: AGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATG...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATGCTTTCCTCGACTCTaGATCTTTCTTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLCFPRL*IFLPAA
Trigger: AGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGGTTCAAGATCAACACTaGTGCTATGAAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRVQDQH*CYEGHA
Trigger: GGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAAC...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCACCTCCCCCACATGTaGTGTTCTGGGCTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQHLPHM*CSGLLP
Trigger: GGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCAAGTGGTCTCCACGATaGTCTGCAGCCTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPKWSPR*SAASLE
Trigger: CTCCAGGGAGGCTGCAGAGCATCGTGGAGACCACTT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATTGCCAACAGCCTCTGTaGCGAGGTGTTAAGGGACCC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYCQQPL*RGVKGP
Trigger: GGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCA...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTAGCGCATCAGCAGCATaGACAGCAAGCTTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSSASAA*TASFGC
Trigger: ACAGCCGAAGCTTGCTGTGCATGCTGCTGATGCGCT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS-3UTR CCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRESGSWR*RQTAPR
Trigger: CCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTCTGCATCTGGATCGTaGCGATGGAGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSSASGS*RWRQTA
Trigger: AGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTTTCGGCTCTGCATCTaGATCGTGGCGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPFRLCI*IVAMEA
Trigger: TGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRSRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGAGCTCACCTGCAGGCTaGGTCGATGCCCAGGTATCC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRSSPAG*VDAQVS
Trigger: GGATACCTGGGCATCGACCCAGCCTGCAGGTGAGCT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACCACATGTGCTGTTCTaGGCTGCTGCCCTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAPHVLF*AAALAS
Trigger: GGAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCACTGGCACTTAGGATaGGTCCAGCTGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECHWHLG*VQLCRA
Trigger: AGCCCTGCACAGCTGGACCCATCCTAAGTGCCAGTG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQLGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTGGGGTGGGAAGTGTaGCTGAGAAGGGCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLALGWEV*LRRAVE
Trigger: CTCCACGGCCCTTCTCAGCCACACTTCCCACCCCAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGGCCGAGGCAGAAAGTaGTCTCCACGATGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECGRGRK*SPRCSA
Trigger: TGCAGAGCATCGTGGAGACCACTTTCTGCCTCGGCC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCAGGAACACGCAGGGCTaGGCGCTGAAGACACAGAAG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPRNTQG*ALKTQK
Trigger: CTTCTGTGTCTTCAGCGCCCAGCCCTGCGTGTTCCT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGAAGGTGTTCCACACTaGCATGGGATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAAREGVPH*HGILFR
Trigger: TCTGAACAGGATCCCATGCCAGTGTGGAACACCTTC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLELRTF*PLKRTQ
Trigger: CTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CAA 72 bp GGGAGGCTGATGGTCCAGTATGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GRLMVQYEHLTR*SRLLDVCCSLL
Trigger: GAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAGATGCTCATACTGGACCATCAGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATTCTCTGTCTGCTGCTaGAAAACCAGCATCTTCGTT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLFSVCC*KTSIFV
Trigger: AACGAAGATGCTGGTTTTTCAGCAGCAGACAGAGAA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTCAACACTGCTGCTATaGAGGACATGCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDSTLLL*RTCPGH
Trigger: ATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSRNWAM*MKSILV
Trigger: GACCAAGATGGACTTCATTCACATGGCCCAGTTCCT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCCTCAACATCAGAAATaGGATCAGCCTGGGGGCACC +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPPQHQK*DQPGGT
Trigger: GGTGCCCCCAGGCTGATCTCATTTCTGATGTTGAGG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSTSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTGGCGAGACCTCATGTaGCCCCTGAACAGGTCATAC +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFWRDLM*PLNRSY
Trigger: GTATGACCTGTTCAGGGGTCACATGAGGTCTCGCCA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCACTGGAGCTGCTCGTaGCCACAAGGTCCAAGATGT +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECHWSCS*PQGPRC
Trigger: ACATCTTGGACCTTGTGGTCACGAGCAGCTCCAGTG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCCCTCCTCAGCTTCATaGACACAGTCCTGCTGGTGT +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPPSSAS*TQSCWC
Trigger: ACACCAGCAGGACTGTGTTCATGAAGCTGAGGAGGG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYVLEDE*GGGKWF
Trigger: GAACCACTTTCCACCACCGCACTCATCCTCGAGGAC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSHLSSS*FFLRWA
Trigger: AGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACGAACAGCTTCAGGATaGCCAGGGCCGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLARTASG*PGPCGT
Trigger: TGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCGAACAGCTTCAGGATaGCCAGGGCCGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRTASG*PGPCGT
Trigger: TGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATGCTGTCTTTCTGCAATaGAGTCAGTACCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDAVFLQ*SQYLSP
Trigger: TGGGCTCAGGTACTGACTGCATTGCAGAAAGACAGC...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTCTGTTCTTCTCGGCTaGCCGGGTGTCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSSVLLG*PGVSLK
Trigger: TTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRECRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGGCCCACGTGTGCACCTaGAGCCTCTACACTGTGACT +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRAHVCT*SLYTVT
Trigger: AGTCACAGTGTAGAGGCTGCAGGTGCACACGTGGGC...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGAGGTCGGAGTCGGACTaGTTCCTCCTCACGTGGACC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRSESD*FLLTWT
Trigger: GGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCAAGACTGGACACGCTaGAGACGGAGACATCATCGC +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFQDWTR*RRRHHR
Trigger: GCGATGATGTCTCCGTCTGCAGCGTGTCCAGTCTTG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTGCTGGGAGATTTGCTaGTCTGTCCTCGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYCWEIC*SVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTGCTTCTTCCTTCGCTaGGCTTCTTTCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYCFFLR*ASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGACCGCCACCTCTCCTTaGCTCGGGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRTATSP*LGQDRC
Trigger: ACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGACATAACCCACATCTaGCCGGTAACAAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLDITHI*PVTSIS
Trigger: GCTTATACTTGTTACCGGCCAGATGTGGGTTATGTC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTCTGCATCTGGATCGTaGCGATGGAGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSSASGS*RWRQTA
Trigger: AGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTTCGGCTCTGCATCTaGATCGTGGCGATGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECFRLCI*IVAMEA
Trigger: TGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATGCAGTGGCTGGCTGTaGTCCGCAGCAGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLACSGWL*SAAAHP
Trigger: AGGATGAGCTGCTGCGGACCACAGCCAGCCACTGCA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAAGCAGATGCAGTGGCTaGCTGTGGTCCGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLASRCSG*LWSAAA
Trigger: AGCTGCTGCGGACCACAGCCAGCCACTGCATCTGCT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTGTGTCAAGGCAACATaGCCCAGAGCTCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPCVKAT*PRAHLQ
Trigger: CTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTGTTCCACACTGGCATaGGATCCTGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPCSTLA*DPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATG +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYECADL*RSSTSM
Trigger: CATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCAACGGCATGTGAAGTaGAGTGTGCAGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPQRHVK*SVQTSG
Trigger: TCCAGAGGTCTGCACACTCCACTTCACATGCCGTTG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTGAAGGGGGTTTCCTaGTCGACCATCCAGAATACC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLKGVS*STIQNT
Trigger: GGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
3UTR CAA 72 bp CACAGGCCCAGCTCAGACCAGATTACATTCAACATCTaGATGTCAGGAAATGGCTACGTCTGGAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: HRPSSDQITFNI*MSGNGYVWRPP
Trigger: CGGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTGCTGTCTGTGCTTCTaGGCTTCTTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDCCLCF*ASSAGF
Trigger: AAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTCAACACTGCTGCTATaGAGGACATGCCCTGGACAT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSSTLLL*RTCPGH
Trigger: ATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPTGPCE*SPSWSG
Trigger: TCCTGACCAAGATGGACTTCATTCACATGGCCCAGT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPRNWAM*MKSILV
Trigger: GACCAAGATGGACTTCATTCACATGGCCCAGTTCCT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGCAGCCTCTACACTGTaGCTGTGTCAAGGCAACATG +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSREAASTL*LCQGNM
Trigger: CATGTTGCCTTGACACAGTCACAGTGTAGAGGCTGC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRERVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATAGAGTCCGGGAAACGTaGCACATGATAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYRVRET*HMIVLG
Trigger: TCCCAGCACTATCATGTGTCACGTTTCCCGGACTCT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 4 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAACCTCATGTGACCCCTaGACAGGTCATACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRETSCDP*TGHTSH
Trigger: GTGGCTTGTATGACCTGTTCAGGGGTCACATGAGGT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTGCACAGCGTTTCCAATaGTTTCCTCGACTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSAQRFQ*FPRLCI
Trigger: GATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGC...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGCACAGCGTTTCCAATaGTTTCCTCGACTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYAQRFQ*FPRLCI
Trigger: GATGCAGAGTCGAGGAAAGCATTGGAAACGCTGTGC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATCAAGATCAACACTGCTaGTATGAAGGACATGCCCTG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDQDQHC*YEGHAL
Trigger: CAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTG...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGTTCAAGATCAACACTaGTGCTATGAAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARVQDQH*CYEGHA
Trigger: GGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAAC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQLIGAE*EFPLQP
Trigger: AGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTCTGTTCTTCTCGGCTaGCCGGGTGTCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFSVLLG*PGVSLK
Trigger: TTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTCTGTTCTTCTCGGCTaGCCGGGTGTCAGTCTGAAA +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPSVLLG*PGVSLK
Trigger: TTTCAGACTGACACCCGGGCAGCCGAGAAGAACAGA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACAACTGTGCAGCAGATaGAGTGGCTGGCTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAQLCSR*SGWLWS
Trigger: GGACCACAGCCAGCCACTGCATCTGCTGCACAGTTG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGGATGGGTCCAGCTGTaGAGGGCTCAAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQGWVQL*RAQRQR
Trigger: TCTCTGCCTTTGAGCCCTGCACAGCTGGACCCATCC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCAGTCCAGAGAACGAATaGCAGCTCGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECSPENE*QLGFPS
Trigger: GGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGGCAGCCTCTACACTTaGCAACAGCCTCTGTGCCGA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQGSLYT*QQPLCR
Trigger: TCGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCAAGACTGGACACGCTaGAGACGGAGACATCATCGC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRQDWTR*RRRHHR
Trigger: GCGATGATGTCTCCGTCTGCAGCGTGTCCAGTCTTG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGAGCAAGCAAGTTCCTTaGAAAGAAGTTACTAAATGG +
Preference number: 4 (lower is better)
Translates to: REEPLLAQGATSPTCAVLSKQVP*KEVTKW
Trigger: CCATTTAGTAACTTCTTTGCAAGGAACTTGCTTGCT...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTAGCAAGCAAGTTCCTTaGAAAGAAGTTACTAAATGG +
Preference number: 4 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLSKQVP*KEVTKW
Trigger: CCATTTAGTAACTTCTTTGCAAGGAACTTGCTTGCT...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTCTTTGAATCCTTCTaGGCATTCTCTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLFESF*AFSRSG
Trigger: GCCACTCCGAGAGAATGCCCAGAAGGATTCAAAGAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCTCTTTGAATCCTTCTaGGCATTCTCTCGGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSLFESF*AFSRSG
Trigger: GCCACTCCGAGAGAATGCCCAGAAGGATTCAAAGAG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATTGCTGGGAGATTTGCTaGTCTGTCCTCGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYCWEIC*SVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTCAGCTGGTTTTGCTaGGAGATTTGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFSWFC*EICWSV
Trigger: GACAGACCAGCAAATCTCCCAGCAAAACCAGCTGAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTCAGCTCTCGCTTTTTaGCCTGAACCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARSALAF*PEPPFL
Trigger: AAGAAATGGTGGTTCAGGCCAAAAAGCGAGAGCTGA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTGCTTCTTCCTTCGCTaGGCTTCTTTCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFCFFLR*ASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATTTTGCCTCTCACACTTaGAGGGATTCCCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYFASHT*RDSLPP
Trigger: TGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAA...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCTACACTTGCCAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGAATGTCAAAGAGCTCGTaGGTGATATTTAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: STLANSLCAEVLRDPGRGMSKSS*VIFNSL
Trigger: CAACGAGTTAAATATCACCCACGAGCTCTTTGACAT...TCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTGGCAAGTGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGATGTCAAAGAGCTCGTaGGTGATATTTAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRMSKSS*VIFNSL
Trigger: CAACGAGTTAAATATCACCCACGAGCTCTTTGACAT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGACCGCCACCTCTCCTTaGCTCGGGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQTATSP*LGQDRC
Trigger: ACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAACCGCCACCTCTCCTTaGCTCGGGCAAGACAGATGT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLATATSP*LGQDRC
Trigger: ACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTGTTCCACACTGGCATaGGATCCTGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPCSTLA*DPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTGTTCCACACTGGCATaGGATCCTGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECCSTLA*DPVQKR
Trigger: CCGCTTCTGAACAGGATCCCATGCCAGTGTGGAACA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGAAGGTGTTCCACACTaGCATGGGATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYEGVPH*HGILFR
Trigger: TCTGAACAGGATCCCATGCCAGTGTGGAACACCTTC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCAACGGCATGTGAAGTaGAGTGTGCAGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYQRHVK*SVQTSG
Trigger: TCCAGAGGTCTGCACACTCCACTTCACATGCCGTTG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCTGAAGGGGGTTTCCTaGTCGACCATCCAGAATACC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYLKGVS*STIQNT
Trigger: GGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATGCGGGTCAGGGCTTTaGAGGTCGGGCTATAGAGCT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLACGSGL*RSGYRA
Trigger: AGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTTTCCATCAGTCATCTTaGTCCAAGGAGAAACTGGTC +
Preference number: 4 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARFHQSS*SKEKLV
Trigger: GACCAGTTTCTCCTTGGACCAAGATGACTGATGGAA...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448507.5
CDS-3UTR TCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTGCTGTCTGTGCTTCTaGGCTTCTTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYCCLCF*ASSAGF
Trigger: AAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCAAAGAGCTCGTGGGTaGTATTTAACTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSQRARG*YLTRCQ
Trigger: TTGGCAACGAGTTAAATATCACCCACGAGCTCTTTG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTCTCTGTCTGCTGCTaGAAAACCAGCATCTTCGTT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFSVCC*KTSIFV
Trigger: AACGAAGATGCTGGTTTTTCAGCAGCAGACAGAGAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRETGPCE*SPSWSG
Trigger: TCCTGACCAAGATGGACTTCATTCACATGGCCCAGT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPTGPCE*SPSWSG
Trigger: TCCTGACCAAGATGGACTTCATTCACATGGCCCAGT...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAAATGCAGTCAGTACCTaGGCCCACTTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRENAVST*AHFLFR
Trigger: CCGAAACAAGAAGTGGGCTCAGGTACTGACTGCATT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCACACATGTACGCATaGCTAACCAAGCCCGTGACC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQAHMYA*LTKPVT
Trigger: GGTCACGGGCTTGGTTAGTCATGCGTACATGTGTGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAACGTGTTGCAGGTTCTaGAGGGGGTTTCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLATCCRF*RGFPGR
Trigger: TCGACCAGGAAACCCCCTTCAGAACCTGCAACACGT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGAGATGTCCTCATTGCTaGCGGACAGCGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRCPHC*RTAWWT
Trigger: TGTCCACCACGCTGTCCGTCAGCAATGAGGACATCT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQVLEDE*GGGKWF
Trigger: GAACCACTTTCCACCACCGCACTCATCCTCGAGGAC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYHLSSS*FFLRWA
Trigger: AGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTGCTTTCCTCGACTCTaGATCTTTCTTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPCFPRL*IFLPAA
Trigger: AGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCTTGGAGGGATTCCCTaGCACCATAAATCTCGAACT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYLGGIP*HHKSRT
Trigger: AGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTCAAGATCAACACTGCTaGTATGAAGGACATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPQDQHC*YEGHAL
Trigger: CAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTG...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACCCATCGTTCAACTGTaGAGCAGATGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAPIVQL*SRCSGW
Trigger: CCAGCCACTGCATCTGCTGCACAGTTGAACGATGGG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCCTCCGCAGGACCGATaGCAGGGAGCAGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSPPQDR*QGAVSQ
Trigger: CTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGAGG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGAGTCCAGAGAACGAATaGCAGCTCGGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRSPENE*QLGFPS
Trigger: GGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATCAGCAACCTGCTCCTaGACCTCGAGGAGCATTAGC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLASATCS*TSRSIS
Trigger: GCTAATGCTCCTCGAGGTGCAGGAGCAGGTTGCTGA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTCACGTGGACCGCGCTaGAGGGTACAGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSSRGPR*RVQAPG
Trigger: ACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTGCTTTGGAGAGGGTaGCTTGCTAGGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLALLWRG*LARSSS
Trigger: GCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTCAGCTCTCGCTTTTTaGCCTGAACCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDSALAF*PEPPFL
Trigger: AAGAAATGGTGGTTCAGGCCAAAAAGCGAGAGCTGA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTGCTTCTTCCTTCGCTaGGCTTCTTTCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRCFFLR*ASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTAACTCGTTGCCAATaGCTAAGCTCCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSLTRCQ*LSSRLC
Trigger: GCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCATGTCAAAGAGCTCGTaGGTGATATTTAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: THVRMTNQARDRVRRMLPMSKSS*VIFNSL
Trigger: CAACGAGTTAAATATCACCCACGAGCTCTTTGACAT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTACAACATGTCATGATATaGACCACCTTGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLQHVMI*TTLLEN
Trigger: ATTTTCCAGCAAGGTGGTCCATATCATGACATGTTG...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGAAGGTGTTCCACACTaGCATGGGATCCTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECEGVPH*HGILFR
Trigger: TCTGAACAGGATCCCATGCCAGTGTGGAACACCTTC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGAGTGTGCAGACCTCTaGAGGAGCAGCACGTCAATG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQECADL*RSSTSM
Trigger: CATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCAACGGCATGTGAAGTaGAGTGTGCAGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRQRHVK*SVQTSG
Trigger: TCCAGAGGTCTGCACACTCCACTTCACATGCCGTTG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTCCATCAGTCATCTTaGTCCAAGGAGAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFHQSS*SKEKRS
Trigger: ACTCCGTTTCTCCTTGGACCAAGATGACTGATGGAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409757.9
CDS-3UTR TCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATTGCTGTCTGTGCTTCTaGGCTTCTTCAGCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYCCLCF*ASSAGF
Trigger: AAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCA...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTTTCTCTGTCTGCTGCTaGAAAACCAGCATCTTCGTT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSFSVCC*KTSIFV
Trigger: AACGAAGATGCTGGTTTTTCAGCAGCAGACAGAGAA...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECLYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRELYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCTAAAATGGGGAGGCTaGTGGTCCAGTATGAGCATC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRLKWGG*WSSMSI
Trigger: GATGCTCATACTGGACCATCAGCCTCCCCATTTTAG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGCTGGAGAGACTGATGTaGAACTGCTTCACCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRLERLM*NCFTRN
Trigger: GTTCCTGGTGAAGCAGTTTCACATCAGTCTCTCCAG...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATTCTTCCTCACATTCTaGTTTGGAGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSREFFLTF*FGEGGL
Trigger: CAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTTCTTCCTCACATTCTaGTTTGGAGAGGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPFFLTF*FGEGGL
Trigger: CAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYFFSWF*WEICWS
Trigger: AGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTTGGAGGGATTCCCTaGCACCATAAATCTCGAACT +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLGGIP*HHKSRT
Trigger: AGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACGTTCAAGATCAACACTaGTGCTATGAAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYVQDQH*CYEGHA
Trigger: GGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAAC...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTTCTTGTTTCGGCTCTaGATCTGGATCGTGGCGATG +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRFLFRL*IWIVAM
Trigger: CATCGCCACGATCCAGATGCAGAGCCGAAACAAGAA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAPHILL*RGWLAR
Trigger: CCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTGCTGGGAGATTTGCTaGTCTGTCCTCGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQCWEIC*SVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTGCTTCTTCCTTCGCTaGGCTTCTTTCAGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQCFFLR*ASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTTAACTCGTTGCCAATaGCTAAGCTCCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLTRCQ*LSSRLC
Trigger: GCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTTAACTCGTTGCCAATaGCTAAGCTCCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYLTRCQ*LSSRLC
Trigger: GCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTATGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTGACATAACCCACATCTaGCCGGTAACAAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSDITHI*PVTSIS
Trigger: GCTTATACTTGTTACCGGCCAGATGTGGGTTATGTC...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGAGAGCGCAGTCCCACTaGAGCCCACGTGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSRAQSH*SPRVHL
Trigger: CAGGTGCACACGTGGGCTCCAGTGGGACTGCGCTCT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: AGMAGIKSPENECQLGFPICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFELRTF*PLKRTQ
Trigger: CTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTC...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYELRTF*PLKRTQ
Trigger: CTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCAACGGCATGTGAAGTaGAGTGTGCAGACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQQRHVK*SVQTSG
Trigger: TCCAGAGGTCTGCACACTCCACTTCACATGCCGTTG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCCATCATGTCTACTGTaGCCTCGCAGCTCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSPSCLL*PRSSEG
Trigger: CCCCTCGGAGCTGCGAGGTCACAGTAGACATGATGG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS-3UTR TCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTTCTCTGTCTGCTGCTaGAAAACCAGCATCTTCGTT +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFFSVCC*KTSIFV
Trigger: AACGAAGATGCTGGTTTTTCAGCAGCAGACAGAGAA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAAATGCAGTCAGTACCTaGGCCCACTTCTTGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLANAVST*AHFLFR
Trigger: CCGAAACAAGAAGTGGGCTCAGGTACTGACTGCATT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTTACTTACAGGGGGCTaGTTCCACTCTGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRLLTGG*FHSVFS
Trigger: AGAGAACACAGAGTGGAATCAGCCCCCTGTAAGTAA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCATACAAGCCACTTCTaGACTAAGATTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECHTSHF*TKIGKV
Trigger: CACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACATACAAGCCACTTCTaGACTAAGATTGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSREHTSHF*TKIGKV
Trigger: CACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATG...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTTTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VECADLWRSSTSMSHFQFFFSWF*WEICWS
Trigger: AGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAA...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTGCTTTCCTCGACTCTaGATCTTTCTTCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRCFPRL*IFLPAA
Trigger: AGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCTAAGCTCCAGACTTTaGCTCTCACACTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQLSSRL*LSHLEG
Trigger: TCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCGTTCAAGATCAACACTaGTGCTATGAAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPVQDQH*CYEGHA
Trigger: GGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAAC...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGTTCAAGATCAACACTaGTGCTATGAAGGACATGCC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYVQDQH*CYEGHA
Trigger: GGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAAC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCGAACAGCTTCAGGATaGCCAGGGCCGTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSRTASG*PGPCGT
Trigger: TGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTCTTGTTTCGGCTCTaGATCTGGATCGTGGCGATG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFLFRL*IWIVAM
Trigger: CATCGCCACGATCCAGATGCAGAGCCGAAACAAGAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTTCAGCTGGTTTTGCTaGGAGATTTGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRFSWFC*EICWSV
Trigger: GACAGACCAGCAAATCTCCCAGCAAAACCAGCTGAA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTCAGCTCTCGCTTTTTaGCCTGAACCACCATTTCTT +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPSALAF*PEPPFL
Trigger: AAGAAATGGTGGTTCAGGCCAAAAAGCGAGAGCTGA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAATTAACTCGTTGCCAATaGCTAAGCTCCAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: SCTSRSISGYGRHKKSRELTRCQ*LSSRLC
Trigger: GCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAA...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATATGTCAAAGAGCTCGTaGGTGATATTTAACTCGTTG +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDMSKSS*VIFNSL
Trigger: CAACGAGTTAAATATCACCCACGAGCTCTTTGACAT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACTATGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATA...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
3UTR CAA 72 bp CCTGAACAGGTCATACAAGCCACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTGGCATGGGATCCTGTT +
Preference number: 4 (lower is better)
Translates to: PEQVIQATSELR*GRCSTLAWDPV
Trigger: AACAGGATCCCATGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTGTTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSVCPRG*VRWWKV
Trigger: CACTTTCCACCACCGCACTCATCCTCGAGGACAGAC...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTGTACAACGGGTCATaGAGCACACGTTCTAAAGTC +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLALYNGS*STRSKV
Trigger: GACTTTAGAACGTGTGCTTCATGACCCGTTGTACAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAACGGTTCATTTCTGTaGTTTTGGATAACCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDNGSFL*FWITKV
Trigger: GACTTTGGTTATCCAAAATCACAGAAATGAACCGTT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTTGGAGGGATTCCCTaGCACCATAAATCTCGAACT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLALGGIP*HHKSRT
Trigger: AGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGATCCTTCCACTGAGCTaGTTAAGGCTAAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQILPLS*LRLSLG
Trigger: ACCAAGGCTTAGCCTTAAGCAGCTCAGTGGAAGGAT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTCAGCTGGTTTTGCTaGGAGATTTGCTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFSWFC*EICWSV
Trigger: GACAGACCAGCAAATCTCCCAGCAAAACCAGCTGAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCAACATGTCATGATATaGACCACCTTGCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSQHVMI*TTLLEN
Trigger: ATTTTCCAGCAAGGTGGTCCATATCATGACATGTTG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 4 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 4 (lower is better)
Translates to: PRGALAGMAGIKSPENECRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGAACTTAGAACTTTCTaGCCTCTGAAGAGGACCCAG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAELRTF*PLKRTQ
Trigger: CTGGGTCCTCTTCAGAGGCCAGAAAGTTCTAAGTTC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACAAAGAGCTCGTGGGTaGTATTTAACTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAQRARG*YLTRCQ
Trigger: TTGGCAACGAGTTAAATATCACCCACGAGCTCTTTG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTCTCTGTCTGCTGCTaGAAAACCAGCATCTTCGTT +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFSVCC*KTSIFV
Trigger: AACGAAGATGCTGGTTTTTCAGCAGCAGACAGAGAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGATAAAGGAGTGGGGGTaGGCCACTGCCCATCGTTCA +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSIKEWG*ATAHRS
Trigger: TGAACGATGGGCAGTGGCTCACCCCCACTCCTTTAT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCGGAACGCCCGTAACATaGACAAAAATAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: YGRHKKSRERMPARLSFPGTPVT*TKISTS
Trigger: AGATGTACTTATTTTTGTTCATGTTACGGGCGTTCC...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAFFSWF*WEICWS
Trigger: AGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTGCAGGCTGGGTCGATaGCCAGGTATCCACAAACAC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSCRLGR*PGIHKH
Trigger: GTGTTTGTGGATACCTGGGCATCGACCCAGCCTGCA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTATGGACCACCTTGCTaGAAAATGCAGAGATTAGGA +
Preference number: 4 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRYGPPC*KMQRLG
Trigger: TCCTAATCTCTGCATTTTCCAGCAAGGTGGTCCATA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCTGTTAGACGTGTGTTaGTCGCTCCTCCGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLLDVC*SLLRLY
Trigger: GTACAGACGGAGGAGCGAGCAACACACGTCTAACAG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATTTAGACTGCGCAGCTaGAAAACGGTTCATTTCTGT +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLAFRLRS*KTVHFC
Trigger: ACAGAAATGAACCGTTTTGCAGCTGCGCAGTCTAAA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGAAAAATAAGTACATCTaGGAGGACAACAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQKNKYI*EDNSAQ
Trigger: CTGTGCGCTGTTGTCCTCGCAGATGTACTTATTTTT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGACAAACACACATCAGTaGCCATCCTCAGAGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSTNTHQ*PSSESP
Trigger: GGGGCTCTCTGAGGATGGCCACTGATGTGTGTTTGT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCTTGATGTCAGGAAATaGCTACGTCTGGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLDVRK*LRLEAT
Trigger: GGTGGCCTCCAGACGTAGCCATTTCCTGACATCAAG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCTGTGCAACATGTCATaGTATGGACCACCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLCNMS*YGPPCW
Trigger: CCAGCAAGGTGGTCCATATCATGACATGTTGCACAG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSTGPCE*SPSWSG
Trigger: TCCTGACCAAGATGGACTTCATTCACATGGCCCAGT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSRNWAM*MKSILV
Trigger: GACCAAGATGGACTTCATTCACATGGCCCAGTTCCT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGGCTGATGGTCCAGTATaGGCATCTGACGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSADGPV*ASDEIV
Trigger: GACAATCTCGTCAGATGCTCATACTGGACCATCAGC...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 4 (lower is better)
Translates to: QVIQATSELRLGRCSTLALHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTCCAGTATGAGCATCTaGCGAGATTGTCTAGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSSSMSI*RDCLGC
Trigger: ACAGCCTAGACAATCTCGTCAGATGCTCATACTGGA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR GCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSFFSWF*WEICWS
Trigger: AGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGGACATAACCCACATCTaGCCGGTAACAAGTATAAGC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSDITHI*PVTSIS
Trigger: GCTTATACTTGTTACCGGCCAGATGTGGGTTATGTC...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGATTTGCCAACGACCCTaGGAAAGTCAGCTAAAATGG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSICQRP*ESQLKW
Trigger: CCATTTTAGCTGACTTTCCCAGGGTCGTTGGCAAAT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCGTGACCTCCAGCTCTaGAAAAACTATCTCAATAAC +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSRDLQL*KNYLNN
Trigger: GTTATTGAGATAGTTTTTCCAGAGCTGGAGGTCACG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR TCA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTTACATTCAACATCTTaGTGTCAGGAAATGGCTACG +
Preference number: 4 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLHSTS*CQEMAT
Trigger: CGTAGCCATTTCCTGACATCAAGATGTTGAATGTAA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp CGGGCAGGGCTCAGGCGTAGGGAGCCGAGCGGCGGAGCGCATCGATaGGGCTCCCCTGCCCCGGCCGGTGTGCGGGAGACGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RAGLRRREPSGGAHR*GSPAPAGVRETARA
Trigger: GGCCCGGGCCGTCTCCCGCACACCGGCCGGGGCAGGGGAGCCCCATCGATGCGCTCCGCCGCTCGGCTCCCTACGCCTGAGCCCTGCCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS TCA 90 bp GTGCGGGAGACGGCCCGGGCCCCGCCGCGGAAGGGAAGCTTTGCGTaGCACCGGAGCTCAGGCCCCGCCGCGGTGGTCTTGGGAGCGGCG +
Preference number: 5 (lower is better)
Translates to: VRETARAPPRKGSFA*HRSSGPAAVVLGAA
Trigger: CGCCGCTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTCCCTTCCGCGGCGGGGCCCGGGCCGTCTCCCGCAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CCA 90 bp GGAGAAACGGAGTTAGCGCGGCTCCGACGCCATCCCCGGGACCCGTaGGCCCGCAGCCCAGGCCCCGCGGGACCGGCAACTCGCGCGACG +
Preference number: 5 (lower is better)
Translates to: GETELARLRRHPRDP*ARSPGPAGPATRAT
Trigger: CGTCGCGCGAGTTGCCGGTCCCGCGGGGCCTGGGCTGCGGGCCCACGGGTCCCGGGGATGGCGTCGGAGCCGCGCTAACTCCGTTTCTCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409757.9
CDS CCA 90 bp GGAAGGGAAGCTTTGCGTGACACCGGAGCTCAGGCCCCGCCGCGGTaGTCTTGGGAGCGGCGCCGTGGCGTCCTCCCAGCCAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GREALRDTGAQAPPR*SWERRRGVLPASLS
Trigger: ACTGAGGCTGGCTGGGAGGACGCCACGGCGCCGCTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTCCCTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS TCA 90 bp CACAGGATGGCAGCGCGCAGGCGCTCTGGAAGGCCCGCTCGGGGATaGGGTCGGAGTCGGACTGCTTCCTCCTCACGTGGACCGCGCTGC +
Preference number: 5 (lower is better)
Translates to: HRMAARRRSGRPARG*GRSRTASSSRGPRC
Trigger: GCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS GCA 90 bp CAGGCGCTCTGGAAGGCCCGCTCGGGGATGAGGTCGGAGTCGGACTaGTTCCTCCTCACGTGGACCGCGCTGCAGGGTACAGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: QALWKARSGMRSESD*FLLTWTALQGTGSG
Trigger: CCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp GCTCTGTTCCCGCTCGGTGCTGCTAGGAGCTGGTGGCGCACAGGATaGCAGCGCGCAGGCGCTCTGGAAGGCCCGCTCGGGGATGAGGTC +
Preference number: 5 (lower is better)
Translates to: ALFPLGAARSWWRTG*QRAGALEGPLGDEV
Trigger: GACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGGGAACAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp GCCCGCTCGGGGATGAGGTCGGAGTCGGACTGCTTCCTCCTCACGTaGACCGCGCTGCAGGGTACAGGCTCCGGGTTCCCGATCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ARSGMRSESDCFLLT*TALQGTGSGFPISR
Trigger: CCTGGAGATCGGGAACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp CTGCTAGGAGCTGGTGGCGCACAGGATGGCAGCGCGCAGGCGCTCTaGAAGGCCCGCTCGGGGATGAGGTCGGAGTCGGACTGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLGAGGAQDGSAQAL*KARSGMRSESDCFL
Trigger: GAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp GGATTTGCGCACGCTCTGTTCCCGCTCGGTGCTGCTAGGAGCTGGTaGCGCACAGGATGGCAGCGCGCAGGCGCTCTGGAAGGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: GFAHALFPLGAARSW*RTGWQRAGALEGPL
Trigger: GAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGGGAACAGAGCGTGCGCAAATCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp GGAGGATTTGCGCACGCTCTGTTCCCGCTCGGTGCTGCTAGGAGCTaGTGGCGCACAGGATGGCAGCGCGCAGGCGCTCTGGAAGGCCCG +
Preference number: 5 (lower is better)
Translates to: GGFAHALFPLGAARS*WRTGWQRAGALEGP
Trigger: CGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGGGAACAGAGCGTGCGCAAATCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CCA 90 bp GAAGCTTTGCGTGACACCGGAGCTCAGGCCCCGCCGCGGTGGTCTTaGGAGCGGCGCCGTGGCGTCCTCCCAGCCAGCCTCAGTCTCTTA +
Preference number: 5 (lower is better)
Translates to: EALRDTGAQAPPRWS*ERRRGVLPASLSLL
Trigger: TAAGAGACTGAGGCTGGCTGGGAGGACGCCACGGCGCCGCTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVDRHLS*ARARQM
Trigger: CATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTC...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVTARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp ATGGCCATCATGTCTACTGTGACCTCGCAGCTCCGAGGGGCCGGCTaGAGAAGCACGGACTCTCCCCGTGCCGCATTCCTGGCACGCCAG +
Preference number: 5 (lower is better)
Translates to: MAIMSTVTSQLRGAG*RSTDSPRAAFLARQ
Trigger: CTGGCGTGCCAGGAATGCGGCACGGGGAGAGTCCGTGCTTCTGCAGCCGGCCCCTCGGAGCTGCGAGGTCACAGTAGACATGATGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS CCA 90 bp CCTGAGCCCACTTCTTGTTTCGGCTCTGCATCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGGCGGGCAGGTCCTCGGGCAGCCGGG +
Preference number: 5 (lower is better)
Translates to: PEPTSCFGSASGSWR*RQTAPRRAGPRAAG
Trigger: CCCGGCTGCCCGAGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAACAAGAAGTGGGCTCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVFGEGG*LGLPAL
Trigger: CAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAA...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS TCA 90 bp TCCCCGAGTCCACGGACTGGAGGCTGTGCCGGTCTTCTAAAGCCCTaGGTTTCAGCTTGGGCCCGTACTCAGGCGCGGAGAGGAGTCGGG +
Preference number: 5 (lower is better)
Translates to: SPSPRTGGCAGLLKP*VSAWARTQARRGVG
Trigger: CCCGACTCCTCTCCGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS GCA 90 bp GAAACAACAGAGGGGCCGCGGCATGGGGCTCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCTCAGTGTCGGAGGGACGGACTTCCC +
Preference number: 5 (lower is better)
Translates to: ETTEGPRHGALIGAE*EFPLQPQCRRDGLP
Trigger: GGGAAGTCCGTCCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS TCA 90 bp CCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAATTCCCGCTGCAGCCTCAGTGTCGGA +
Preference number: 5 (lower is better)
Translates to: PGVSLKQQRGRGMGL*LVPSANSRCSLSVG
Trigger: TCCGACACTGAGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLFGEGG*LGLPAL
Trigger: CAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAA...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGTTTTGCTGGGAGATTaGCTGGTCTGTCCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: KPVTGSAECSPGPACQRTVLLGD*LVCPRG
Trigger: TCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAAC...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGCTAAGCTCCAGACTTaGCCTCTCACACTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLAKLQT*PLTLGG
Trigger: CCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGCTAAGCTCCAGACTTaGCCTCTCACACTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAAKLQT*PLTLGG
Trigger: CCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPDRHLS*ARARQM
Trigger: CATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGGAAACGTGGAGGATTaGCGCACGCTCTGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLGNVED*RTLCSR
Trigger: GCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTCC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCGAGCTCAAGGTGACGTaGGTAAACTGTGGGTCATCG +
Preference number: 5 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLELKVT*VNCGSS
Trigger: CGATGACCCACAGTTTACCAACGTCACCTTGAGCTC...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS TCA 90 bp TCGGCGGGCAGGTCCTCGGGCAGCCGGGTCAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTCAGGATGTCCTCGAACAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SAGRSSGSRVRNWAM*MKSILVRMSSNSFR
Trigger: CCTGAAGCTGTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCCGGCTGCCCGAGGACCTGCCCGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp TCAGTACCTGAGCCCACTTCTTGTTTCGGCTCTGCATCTGGATCGTaGCGATGGAGGCAAACAGCTCCTCGGCGGGCAGGTCCTCGGGCA +
Preference number: 5 (lower is better)
Translates to: SVPEPTSCFGSASGS*RWRQTAPRRAGPRA
Trigger: TGCCCGAGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAACAAGAAGTGGGCTCAGGTACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp TCCGGGTTCCCGATCTCCAGGGTAGGAATCCCCGAGTCCACGGACTaGAGGCTGTGCCGGTCTTCTAAAGCCCTGAGTTTCAGCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SGFPISRVGIPESTD*RLCRSSKALSFSLG
Trigger: GCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGATTCCTACCCTGGAGATCGGGAACCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGCCCAAGTCATTGTGTTaGTCAAGCCTTGCACTTTGT +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVPKSLC*SSLALC
Trigger: ACAAAGTGCAAGGCTTGACAAACACAATGACTTGGG...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: THVRMTNQARDRVRRMLPDRHLS*ARARQM
Trigger: CATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTC...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: SAGPMPGSSLPERSPTGALSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 5 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLEHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTG +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVTSELR*GRCSTL
Trigger: CAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGAGGCAGCCTCTACACTaGCCAACAGCCTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRRQPLH*PTASVP
Trigger: CGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCCT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCTTGAGATTGACGTGTaGCAGGTTCTGAAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLLEIDV*QVLKGV
Trigger: AACCCCCTTCAGAACCTGCAACACGTCAATCTCAAG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCAGGAAACGTGGAGGATTaGCGCACGCTCTGTTCCCGC +
Preference number: 5 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPGNVED*RTLCSR
Trigger: GCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTCC...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS TCA 90 bp CGGGCAGGTCCTCGGGCAGCCGGGTCAGGAACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGATGTCCTCGAACAGCTTCAGGATGC +
Preference number: 5 (lower is better)
Translates to: RAGPRAAGSGTGPCE*SPSWSGCPRTASGC
Trigger: GCATCCTGAAGCTGTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCCGGCTGCCCGAGGACCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp CCGATCTCCAGGGTAGGAATCCCCGAGTCCACGGACTGGAGGCTGTaGCGGTCTTCTAAAGCCCTGAGTTTCAGCTTGGGCCCGTACTCA +
Preference number: 5 (lower is better)
Translates to: PISRVGIPESTDWRL*RSSKALSFSLGPYS
Trigger: TGAGTACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGATTCCTACCCTGGAGATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS-3UTR CAA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARTARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCGCCCTGAGTTTCAGCTaGGGCCCGTACTCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSALSFS*GPYSGA
Trigger: CGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGC...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCTTTCCATCAGTCATCTaGGTCCAAGGAGAAACTGGT +
Preference number: 5 (lower is better)
Translates to: KPVTGSAECSPGPACQRTFPSVI*VQGETG
Trigger: ACCAGTTTCTCCTTGGACCAAGATGACTGATGGAAA...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448507.5
CDS GCA 90 bp TCTTGGTCAGGATGTCCTCGAACAGCTTCAGGATGCCCAGGGCCGTaGGGAACAGGAACTCTTCCCCATCGCGACAGAACACGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SWSGCPRTASGCPGP*GTGTLPHRDRTRPR
Trigger: TCTGGGACGTGTTCTGTCGCGATGGGGAAGAGTTCCTGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCGAGGACATCCTGACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp TGGACACGCTGCAGACGGAGACATCATCGCTGCGGGTCAGGGCTTTaGAGGTCGGGCTATAGAGCTTTACCGAGTCATAGCCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WTRCRRRHHRCGSGL*RSGYRALPSHSLSW
Trigger: CCAGGACAGGCTATGACTCGGTAAAGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCGTCTGCAGCGTGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCCCAAGTCATTGTGTTaGTCAAGCCTTGCACTTTGT +
Preference number: 5 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLPKSLC*SSLALC
Trigger: ACAAAGTGCAAGGCTTGACAAACACAATGACTTGGG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp AAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCCCTTCTGTATTCTCTTaGAATCCTTCTGGGCATTCT +
Preference number: 5 (lower is better)
Translates to: KPVTGSAECSPGPACQRTPSVFS*NPSGHS
Trigger: AGAATGCCCAGAAGGATTCAAAGAGAATACAGAAGG...GGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp GCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGGGCTGCTGCCCTGGCCTCCTAGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AQGATSPTCAVLGCCPGLLGLPA*SSYSFC
Trigger: ACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAG...GAGGCCAGGGCAGCAGCCCAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp TCCGCAGGACCGATGCCAGGGAGCAGTCTCCCAGAGCGCAGTCCCACTGGAGCCGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: SAGPMPGSSLPERSPTGAVIFNS*PMAKLQ
Trigger: CTGGAGCTTAGCCATTGGCAACGAGTTAAATATCAC...GGCTCCAGTGGGACTGCGCTCTGGGAGACTGCTCCCTGGCATCGGTCCTGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GACCGGGTCCGCAGAATGCTCCCCAGGACCAGCCTGCCAGCGGACCGCCACGTGATATCTGGAGTTAGGTaGTTCTTCTTGAAATGCGCA +
Preference number: 5 (lower is better)
Translates to: DRVRRMLPRTSLPADRHVISGVR*FFLKCA
Trigger: TGCGCATTTCAAGAAGAACAACCTAACTCCAGATAT...CACGTGGCGGTCCGCTGGCAGGCTGGTCCTGGGGAGCATTCTGCGGACCCGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS TCA 90 bp GCGGAGAGGAGTCGGGGCGCCTTGAGATTGACGTGTTGCAGGTTCTaGAGGGGGTTTCCTGGTCGACCATCCAGAATACCCATGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AERSRGALRLTCCRF*RGFPGRPSRIPMKA
Trigger: AGCCTTCATGGGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCTCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409757.9
ENST00000427736.1
ENST00000444368.1
ENST00000448507.5
CDS CCA 90 bp CTTTGGAGGTCGGGCTATAGAGCTTTACCGAGTCATAGCCTGTCCTaGGAAACGTGGAGGATTTGCGCACGCTCTGTTCCCGCTCGGTGC +
Preference number: 5 (lower is better)
Translates to: LWRSGYRALPSHSLS*ETWRICARSVPARC
Trigger: GCACCGAGCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTCCCAGGACAGGCTATGACTCGGTAAAGCTCTATAGCCCGACCTCCAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CCA 90 bp CATTCTTTCCAACAGGGCAAAAGGGAGAGAAGAAGCCAAAGGGCCTaGAGGTGGACTCCCCAGGATCATGCAGGCCACTCACCGTGGGTG +
Preference number: 5 (lower is better)
Translates to: HSFQQGKRERRSQRA*RWTPQDHAGHSPWV
Trigger: CACCCACGGTGAGTGGCCTGCATGATCCTGGGGAGTCCACCTCCAGGCCCTTTGGCTTCTTCTCTCCCTTTTGCCCTGTTGGAAAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS-3UTR CAA 90 bp GATCCCCAGGGGCAATCTGAACACACTGCACGAGGCCCTTTGCCGCGCCACCTTGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 5 (lower is better)
Translates to: DPQGQSEHTARGPLPRHLEHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...AAGGTGGCGCGGCAAAGGGCCTCGTGCAGTGTGTTCAGATTGCCCCTGGGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATAGGAGTCGGGGCGCCTaGAGATTGACGTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDRSRGA*RLTCCR
Trigger: CCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCTCCAAGATGTCCTCATaGCTGACGGACAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: THVRMTNQARDRVRRMLPSKMSS*LTDSVV
Trigger: CACCACGCTGTCCGTCAGCAATGAGGACATCTTGGA...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYDRHLS*ARARQM
Trigger: CATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CTCGGCTGCCCGGGTGTCAGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCATATCTGGAGTTAGGTaGTTCTTCTTGAAATGCGCA +
Preference number: 5 (lower is better)
Translates to: LGCPGVSLKQQRGRGMGLISGVR*FFLKCA
Trigger: TGCGCATTTCAAGAAGAACAACCTAACTCCAGATAT...GAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACTGACACCCGGGCAGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: VECADLWRSSTSMSHFQFTARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: SCTSRSISGYGRHKKSRETARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTAGGCAGCCTCTACACTaGCCAACAGCCTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: AGMAGIKSPENECQLGFPRQPLH*PTASVP
Trigger: CGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCCT...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGCCACCCGCAGCCATCTaGGAAGTGGGAAGCGGCCGG +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQPPAAI*EVGSGR
Trigger: CCGGCCGCTTCCCACTTCCAAGATGGCTGCGGGTGG...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448507.5
CDS TCA 90 bp CCTGGAGGTGGACTCCCCAGGATCATGCAGGCCACTCACCGTGGGTaGTATTTAACTCGTTGCCAATGGCTAAGCTCCAGACTTTGCCTC +
Preference number: 5 (lower is better)
Translates to: PGGGLPRIMQATHRG*YLTRCQWLSSRLCL
Trigger: GAGGCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGATCCTGGGGAGTCCACCTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS GCA 90 bp TGTCAGGTAACCGGAGTGCACAGCACTAAACCCAGGCCTCCCAACTaGCCCTCTCTCCTGAAGGACACAGTCTCCTGGTCTCTCAAAAGA +
Preference number: 5 (lower is better)
Translates to: CQVTGVHSTKPRPPN*PSLLKDTVSWSLKR
Trigger: TCTTTTGAGAGACCAGGAGACTGTGTCCTTCAGGAGAGAGGGGCAGTTGGGAGGCCTGGGTTTAGTGCTGTGCACTCCGGTTACCTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CCA 90 bp AGGGCCTGGAGGTGGACTCCCCAGGATCATGCAGGCCACTCACCGTaGGTGATATTTAACTCGTTGCCAATGGCTAAGCTCCAGACTTTG +
Preference number: 5 (lower is better)
Translates to: RAWRWTPQDHAGHSP*VIFNSLPMAKLQTL
Trigger: CAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGATCCTGGGGAGTCCACCTCCAGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSFGEGG*LGLPAL
Trigger: CAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAA...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GAGAGTCAACGGCATGTGAAGTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTGTTTTGCTGGGAGATTaGCTGGTCTGTCCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: ESQRHVKWSVQTSGGAARVLLGD*LVCPRG
Trigger: TCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAAC...ACGTGCTGCTCCTCCAGAGGTCTGCACACTCCACTTCACATGCCGTTGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATG +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRDRHLS*ARARQM
Trigger: CATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTC...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGACTGCACGAGGCCCTTaGCCGCGCCACCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRTARGP*PRHLLY
Trigger: GTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCAGT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGTTTCCATCAGTCATCTaGGTCCAAGGAGAAACGGAG +
Preference number: 5 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRFPSVI*VQGETE
Trigger: CTCCGTTTCTCCTTGGACCAAGATGACTGATGGAAA...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409757.9
CDS-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAAGGAGTCGGGGCGCCTaGAGATTGACGTGTTGCAGG +
Preference number: 5 (lower is better)
Translates to: SCTSRSISGYGRHKKSRERSRGA*RLTCCR
Trigger: CCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCCCTGAGTTTCAGCTaGGGCCCGTACTCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQALSFS*GPYSGA
Trigger: CGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGCCCAAGTCATTGTGTTaGTCAAGCCTTGCACTTTGT +
Preference number: 5 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRPKSLC*SSLALC
Trigger: ACAAAGTGCAAGGCTTGACAAACACAATGACTTGGG...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp AGAGAGGAGCCACTGCTGGCACAAGGGGCCACCTCCCCCACATGTGCTGTTCTGCCTTCTGTATTCTCTTaGAATCCTTCTGGGCATTCT +
Preference number: 5 (lower is better)
Translates to: REEPLLAQGATSPTCAVLPSVFS*NPSGHS
Trigger: AGAATGCCCAGAAGGATTCAAAGAGAATACAGAAGG...CAGAACAGCACATGTGGGGGAGGTGGCCCCTTGTGCCAGCAGTGGCTCCTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTGCTAAGCTCCAGACTTaGCCTCTCACACTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGMAGIKSPENECQLGFPAKLQT*PLTLGG
Trigger: CCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGC...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGAGGCAGCCTCTACACTaGCCAACAGCCTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRRQPLH*PTASVP
Trigger: CGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCCT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCAAGATGTCCTCATaGCTGACGGACAGCGTGGTG +
Preference number: 5 (lower is better)
Translates to: AGMAGIKSPENECQLGFPSKMSS*LTDSVV
Trigger: CACCACGCTGTCCGTCAGCAATGAGGACATCTTGGA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATGAGCTCAAGGTGACGTaGGTAAACTGTGGGTCATCG +
Preference number: 5 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDELKVT*VNCGSS
Trigger: CGATGACCCACAGTTTACCAACGTCACCTTGAGCTC...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCACTAGGTCTTCCAGCCTaGTCTTCATATTCCATGAAC +
Preference number: 5 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPLGLPA*SSYSMN
Trigger: GTTCATGGAATATGAAGACAAGGCTGGAAGACCTAG...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451522.6
CDS-3UTR CAA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTATTCCATCCCAAGTCATaGTGTTTGTCAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLFHPKS*CLSSLA
Trigger: TGCAAGGCTTGACAAACACAATGACTTGGGATGGAA...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCCTTCTTCAGCTGGTTTaGCTGGGAGATTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSLLQLV*LGDLLV
Trigger: GACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAAG...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATGCTAAGCTCCAGACTTaGCCTCTCACACTTGGAGGG +
Preference number: 5 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYAKLQT*PLTLGG
Trigger: CCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGC...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLVIFNS*PMAKLQ
Trigger: CTGGAGCTTAGCCATTGGCAACGAGTTAAATATCAC...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCAGGATGATATGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: HVRMTNQARDRVRRMLPRMIWTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCATATCAT...CCTGGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 5 (lower is better)
Translates to: PRGALAGMAGIKSPENECAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CAACAGCCTCTGTGCCGAGGTGTTAAGGGACCCTGGCCGGGGACTCAGAACTTAACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTG +
Preference number: 5 (lower is better)
Translates to: QQPLCRGVKGPWPGTQNLTSELR*GRCSTL
Trigger: CAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGT...TAAGTTCTGAGTCCCCGGCCAGGGTCCCTTAACACCTCGGCACAGAGGCTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGAGGCAGCCTCTACACTaGCCAACAGCCTCTGTGCCG +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQRQPLH*PTASVP
Trigger: CGGCACAGAGGCTGTTGGCAAGTGTAGAGGCTGCCT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACAAGCCACGGGTTTCCTaGATAGAGCTCAAGGTGACG +
Preference number: 5 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYKPRVS*IELKVT
Trigger: CGTCACCTTGAGCTCTATCAAGGAAACCCGTGGCTT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGTTTTGCTGGGAGATTaGCTGGTCTGTCCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: SCTSRSISGYGRHKKSREVLLGD*LVCPRG
Trigger: TCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAAC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGTTTTGCTGGGAGATTaGCTGGTCTGTCCTCGAGGA +
Preference number: 5 (lower is better)
Translates to: PRGALAGMAGIKSPENECVLLGD*LVCPRG
Trigger: TCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAAC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCTTCTTCAGCTGGTTTaGCTGGGAGATTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYLLQLV*LGDLLV
Trigger: GACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAAG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: AGMAGIKSPENECQLGFPLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...AGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GGAGGTGAGTCAGCATTTAAAGGCCGAGGCAGAAAGTGGTCTCCACGATGCTCTCTAGGTCTTCCAGCCTaGTCTTCATATTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: GGESAFKGRGRKWSPRCSLGLPA*SSYSRE
Trigger: CTCCCTGGAATATGAAGACAAGGCTGGAAGACCTAG...AGAGCATCGTGGAGACCACTTTCTGCCTCGGCCTTTAAATGCTGACTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS GCA 90 bp ACAGCGTTTCCAATGCTTTCCTCGACTCTGCATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCTTCTTTCAGCTCTCGCTTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: TAFPMLSSTLHLSSS*FFLRWASFSSRFLA
Trigger: GGCCAAAAAGCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCATTGGAAACGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTG +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQFGEGG*LGLPAL
Trigger: CAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAA...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GTGGAGTGTGCAGACCTCTGGAGGAGCAGCACGTCAATGTCTCATTTCCAGTTTCTTCTTCAGCTGGTTTaGCTGGGAGATTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: VECADLWRSSTSMSHFQFLLQLV*LGDLLV
Trigger: GACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAAG...AAACTGGAAATGAGACATTGACGTGCTGCTCCTCCAGAGGTCTGCACACTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGGCTGTTAGACGTGTGTaGCTCGCTCCTCCGTCTGTA +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQAVRRV*LAPPSV
Trigger: TACAGACGGAGGAGCGAGCAACACACGTCTAACAGC...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAGAGCATCTGACGAGATaGTCTAGGCTGTTAGACGTG +
Preference number: 5 (lower is better)
Translates to: SCTSRSISGYGRHKKSREEHLTR*SRLLDV
Trigger: CACGTCTAACAGCCTAGACAATCTCGTCAGATGCTC...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACTGTGTCAAGGCAACATGGCCCAGAGCTCACCTGCAGGCTGGGTCGATGCCCATTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: TVSRQHGPELTCRLGRCPFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...TGGGCATCGACCCAGCCTGCAGGTGAGCTCTGGGCCATGTTGCCTTGACACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp GCGGTGGTGGAAAGTGGTTCAAAGTCAAGATTCTTCCTCACATTCTaGTTTGGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTTGTCTTCA +
Preference number: 5 (lower is better)
Translates to: AVVESGSKSRFFLTF*FGEGGLLGLPALSS
Trigger: TGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACCACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp CACAGTCTCCTGGTCTCTCAAAAGACACAGATTCGTGGCAATGGCTaGCATTCTTTCCAACAGGGCAAAAGGGAGAGAAGAAGCCAAAGG +
Preference number: 5 (lower is better)
Translates to: HSLLVSQKTQIRGNG*HSFQQGKRERRSQR
Trigger: CCTTTGGCTTCTTCTCTCCCTTTTGCCCTGTTGGAAAGAATGGCAGCCATTGCCACGAATCTGTGTCTTTTGAGAGACCAGGAGACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CCA 90 bp GAGATTTGCTGGTCTGTCCTCGAGGATGAGTGCGGTGGTGGAAAGTaGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: EICWSVLEDECGGGK*FKVKILPHILLWRG
Trigger: CCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCAAATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS CCA 90 bp AGGACACAGTCTCCTGGTCTCTCAAAAGACACAGATTCGTGGCAATaGCTGCCATTCTTTCCAACAGGGCAAAAGGGAGAGAAGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RTQSPGLSKDTDSWQ*LPFFPTGQKGEKKP
Trigger: TGGCTTCTTCTCTCCCTTTTGCCCTGTTGGAAAGAATGGCAGCCATTGCCACGAATCTGTGTCTTTTGAGAGACCAGGAGACTGTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACACATGTACGCATGACTAACCAAGCCCGTGACCGGGTCCGCAGAATGCTCCCCATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: THVRMTNQARDRVRRMLPITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...GGGGAGCATTCTGCGGACCCGGTCACGGGCTTGGTTAGTCATGCGTACATGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp AGCTGGTTTTGCTGGGAGATTTGCTGGTCTGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTCAAAGTCAAGATTCTTCCTCACATT +
Preference number: 5 (lower is better)
Translates to: SWFCWEICWSVLEDE*GGGKWFKVKILPHI
Trigger: AATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAACCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS-3UTR CAA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACCCTTCTGTATTCTCTTaGAATCCTTCTGGGCATTCT +
Preference number: 5 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYPSVFS*NPSGHS
Trigger: AGAATGCCCAGAAGGATTCAAAGAGAATACAGAAGG...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATCTAGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYLGLPA*SSYSFC
Trigger: ACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAG...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCCTAGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGT +
Preference number: 5 (lower is better)
Translates to: YGRHKKSRERMPARLSFPLGLPA*SSYSFC
Trigger: ACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAG...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCACTTCTTCAGCTGGTTTaGCTGGGAGATTTGCTGGTC +
Preference number: 5 (lower is better)
Translates to: QVIQATSELRLGRCSTLALLQLV*LGDLLV
Trigger: GACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAAG...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PRGALAGMAGIKSPENECVIFNS*PMAKLQ
Trigger: CTGGAGCTTAGCCATTGGCAACGAGTTAAATATCAC...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATATATCTGGAGTTAGGTaGTTCTTCTTGAAATGCGCA +
Preference number: 5 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDISGVR*FFLKCA
Trigger: TGCGCATTTCAAGAAGAACAACCTAACTCCAGATAT...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCATATCTGGAGTTAGGTaGTTCTTCTTGAAATGCGCA +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSISGVR*FFLKCA
Trigger: TGCGCATTTCAAGAAGAACAACCTAACTCCAGATAT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATACTTCTGAACTAAGATaGGGAAGGTGTTCCACACTG +
Preference number: 5 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYTSELR*GRCSTL
Trigger: CAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 90 bp ATGGCTAAGCTCCAGACTTTGCCTCTCACACTTGGAGGGATTCCCTaGCACCATAAATCTCGAACTTTTCTAGAGCACCACATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: MAKLQTLPLTLGGIP*HHKSRTFLEHHIVS
Trigger: GGAAACAATGTGGTGCTCTAGAAAAGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS CCA 90 bp TGGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTaGCTTGCTAGGTCTTCCAGCCTTGTCTTCATATTCCAGGGAGGA +
Preference number: 5 (lower is better)
Translates to: WFKVKILPHILLWRG*LARSSSLVFIFQGG
Trigger: TCCTCCCTGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS-3UTR CAA 90 bp TCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAAATGATATGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: SCTSRSISGYGRHKKSREMIWTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCATATCAT...TTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TGCACGAGGCCCTTTGCCGCGCCACCTTCTGTACGACTTAAGGAACATCTTTATATGATATGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: CTRPFAAPPSVRLKEHLYMIWTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCATATCAT...ATAAAGATGTTCCTTAAGTCGTACAGAAGGTGGCGCGGCAAAGGGCCTCGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp AGGCGGCCCCTCCCACAGGCCCAGCTCAGACCAGATTACATTCAACATCTTGATTTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: RRPLPQAQLRPDYIQHLDFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...ATCAAGATGTTGAATGTAATCTGGTCTGAGCTGGGCCTGTGGGAGGGGCCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp ACCTGCTCCTGCACCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: TCSCTSRSISGYGRHKKSITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...GGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGGTGCAGGAGCAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp CCAGCCTTGTCTTCATATTCCTTCTGTATTCTCTTTGAATCCTTCTaGGCATTCTCTCGGAGTGGCGCTTTCCCAAATAACTTCCATCCC +
Preference number: 5 (lower is better)
Translates to: PALSSYSFCILFESF*AFSRSGAFPNNFHP
Trigger: GGGATGGAAGTTATTTGGGAAAGCGCCACTCCGAGAGAATGCCCAGAAGGATTCAAAGAGAATACAGAAGGAATATGAAGACAAGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CCA 90 bp GGTGGAAAGTGGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTTGTCTTCATATTC +
Preference number: 5 (lower is better)
Translates to: GGKWFKVKILPHILL*RGWLARSSSLVFIF
Trigger: GAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 90 bp TGGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTaGCTTGCTAGGTCTTCCAGCCTTGTCTTCATATTCCATGAACGC +
Preference number: 5 (lower is better)
Translates to: WFKVKILPHILLWRG*LARSSSLVFIFHER
Trigger: GCGTTCATGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451522.6
CDS-3UTR CAA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QVIQATSELRLGRCSTLAVIFNS*PMAKLQ
Trigger: CTGGAGCTTAGCCATTGGCAACGAGTTAAATATCAC...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CTGACGAGATTGTCTAGGCTGTTAGACGTGTGTTGCTCGCTCCTCCGTCTGTACATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: LTRLSRLLDVCCSLLRLYITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...GTACAGACGGAGGAGCGAGCAACACACGTCTAACAGCCTAGACAATCTCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp GCGGAATACATCGTAGTGCTATCTGGAGAGACTGATGTGAAACTGCTTCACCAGATGATATGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: AEYIVVLSGETDVKLLHQMIWTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCATATCAT...CTGGTGAAGCAGTTTCACATCAGTCTCTCCAGATAGCACTACGATGTATTCCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCAATGATATGGACCACCTaGCTGGAAAATGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: QVIQATSELRLGRCSTLAMIWTT*LENAEI
Trigger: AATCTCTGCATTTTCCAGCAAGGTGGTCCATATCAT...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGATATCTGGAGTTAGGTaGTTCTTCTTGAAATGCGCA +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRISGVR*FFLKCA
Trigger: TGCGCATTTCAAGAAGAACAACCTAACTCCAGATAT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TATGGCAGGCATAAAAAGTCCAGAGAACGAATGCCAGCTCGGCTTTCCTTCCCCTTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: YGRHKKSRERMPARLSFPFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...GGGGAAGGAAAGCCGAGCTGGCATTCGTTCTCTGGACTTTTTATGCCTGCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCTTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: PRGALAGMAGIKSPENECFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CCTCGAGGAGCATTAGCGGGTATGGCAGGCATAAAAAGTCCAGAGAACGAATGCATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: PRGALAGMAGIKSPENECITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...GCATTCGTTCTCTGGACTTTTTATGCCTGCCATACCCGCTAATGCTCCTCGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGAAGCCACGGGTTTCCTaGATAGAGCTCAAGGTGACG +
Preference number: 5 (lower is better)
Translates to: SSSGKTISITQSAIPFLSKPRVS*IELKVT
Trigger: CGTCACCTTGAGCTCTATCAAGGAAACCCGTGGCTT...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CCA 90 bp TGGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTaGCTTGCTAGGTCTTCCAGCCTTGTCTTCATATTCCTTCTGTAT +
Preference number: 5 (lower is better)
Translates to: WFKVKILPHILLWRG*LARSSSLVFIFLLY
Trigger: ATACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS-3UTR CAA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTTAAGCCTATCTCTATaGCCACAGGGCTTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLSLSL*PQGFLA
Trigger: TGCGAGGAAGCCCTGTGGCAATAGAGATAGGCTTAA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp CATCAGTGGCCATCCTCAGAGAGCCCCTGTTCCTTTAATGCTATCTTTCGTAGGATTACATTCAACATCTaGATGTCAGGAAATGGCTAC +
Preference number: 5 (lower is better)
Translates to: HQWPSSESPCSFNAIFRRITFNI*MSGNGY
Trigger: GTAGCCATTTCCTGACATCAAGATGTTGAATGTAAT...CCTACGAAAGATAGCATTAAAGGAACAGGGGCTCTCTGAGGATGGCCACTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGCTTGAGATTGACGTGTaGCAGGTTCTGAAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: SSSGKTISITQSAIPFLSLEIDV*QVLKGV
Trigger: AACCCCCTTCAGAACCTGCAACACGTCAATCTCAAG...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS-3UTR CAA 90 bp CAGGTCATACAAGCCACTTCTGAACTAAGATTGGGAAGGTGTTCCACACTGGCATTCATTTCTGTGATTTaGGATAACCAAAGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: QVIQATSELRLGRCSTLAFISVI*DNQSPH
Trigger: GTGAGGACTTTGGTTATCCAAAATCACAGAAATGAA...TGCCAGTGTGGAACACCTTCCCAATCTTAGTTCAGAAGTGGCTTGTATGACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS-3UTR CAA 90 bp TCCAGCTCTGGAAAAACTATCTCAATAACTCAATCAGCGATCCCTTTCTTATCGTTCCATCCCAAGTCATaGTGTTTGTCAAGCCTTGCA +
Preference number: 5 (lower is better)
Translates to: SSSGKTISITQSAIPFLSFHPKS*CLSSLA
Trigger: TGCAAGGCTTGACAAACACAATGACTTGGGATGGAA...CGATAAGAAAGGGATCGCTGATTGAGTTATTGAGATAGTTTTTCCAGAGCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CAA 72 bp GGGAGACGGCCCGGGCCCCGCCGCGGAAGGGAAGCTTaGCGTGACACCGGAGCTCAGGCCCCGCCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: GRRPGPRRGREA*RDTGAQAPPRW
Trigger: CCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTCCCTTCCGCGGCGGGGCCCGGGCCGTCTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CAA 90 bp CCGGTGTGCGGGAGACGGCCCGGGCCCCGCCGCGGAAGGGAAGCTTaGCGTGACACCGGAGCTCAGGCCCCGCCGCGGTGGTCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PVCGRRPGPRRGREA*RDTGAQAPPRWSWE
Trigger: CTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTCCCTTCCGCGGCGGGGCCCGGGCCGTCTCCCGCACACCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CCA 72 bp CGTGACACCGGAGCTCAGGCCCCGCCGCGGTGGTCTTaGGAGCGGCGCCGTGGCGTCCTCCCAGCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RDTGAQAPPRWS*ERRRGVLPASL
Trigger: GAGGCTGGCTGGGAGGACGCCACGGCGCCGCTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CCA 72 bp CTCAGGCGTAGGGAGCCGAGCGGCGGAGCGCATCGATaGGGCTCCCCTGCCCCGGCCGGTGTGCGGGAGACG +
Preference number: 6 (lower is better)
Translates to: LRRREPSGGAHR*GSPAPAGVRET
Trigger: CGTCTCCCGCACACCGGCCGGGGCAGGGGAGCCCCATCGATGCGCTCCGCCGCTCGGCTCCCTACGCCTGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS TCA 72 bp ACGGCCCGGGCCCCGCCGCGGAAGGGAAGCTTTGCGTaGCACCGGAGCTCAGGCCCCGCCGCGGTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TARAPPRKGSFA*HRSSGPAAVVL
Trigger: CAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGCTTCCCTTCCGCGGCGGGGCCCGGGCCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CCA 72 bp GCTTTGCGTGACACCGGAGCTCAGGCCCCGCCGCGGTaGTCTTGGGAGCGGCGCCGTGGCGTCCTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALRDTGAQAPPR*SWERRRGVLPA
Trigger: GGCTGGGAGGACGCCACGGCGCCGCTCCCAAGACCACCGCGGCGGGGCCTGAGCTCCGGTGTCACGCAAAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS CCA 72 bp CCGCTCGGTGCTGCTAGGAGCTGGTGGCGCACAGGATaGCAGCGCGCAGGCGCTCTGGAAGGCCCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PLGAARSWWRTG*QRAGALEGPLG
Trigger: CCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp GCTGGTGGCGCACAGGATGGCAGCGCGCAGGCGCTCTaGAAGGCCCGCTCGGGGATGAGGTCGGAGTCGGAC +
Preference number: 6 (lower is better)
Translates to: AGGAQDGSAQAL*KARSGMRSESD
Trigger: GTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp GCGCACGCTCTGTTCCCGCTCGGTGCTGCTAGGAGCTaGTGGCGCACAGGATGGCAGCGCGCAGGCGCTCTG +
Preference number: 6 (lower is better)
Translates to: AHALFPLGAARS*WRTGWQRAGAL
Trigger: CAGAGCGCCTGCGCGCTGCCATCCTGTGCGCCACCAGCTCCTAGCAGCACCGAGCGGGAACAGAGCGTGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS TCA 72 bp GCAGCGCGCAGGCGCTCTGGAAGGCCCGCTCGGGGATaGGGTCGGAGTCGGACTGCTTCCTCCTCACGTGGA +
Preference number: 6 (lower is better)
Translates to: AARRRSGRPARG*GRSRTASSSRG
Trigger: TCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCAGAGCGCCTGCGCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS GCA 72 bp GAGGGGCCGCGGCATGGGGCTCTGATTGGTGCCGAGTaGGAATTCCCGCTGCAGCCTCAGTGTCGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: EGPRHGALIGAE*EFPLQPQCRRD
Trigger: GTCCCTCCGACACTGAGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 72 bp CGGAGTCGGACTGCTTCCTCCTCACGTGGACCGCGCTaGAGGGTACAGGCTCCGGGTTCCCGATCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: RSRTASSSRGPR*RVQAPGSRSPG
Trigger: CCCTGGAGATCGGGAACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp GGGATGAGGTCGGAGTCGGACTGCTTCCTCCTCACGTaGACCGCGCTGCAGGGTACAGGCTCCGGGTTCCCG +
Preference number: 6 (lower is better)
Translates to: GMRSESDCFLLT*TALQGTGSGFP
Trigger: CGGGAACCCGGAGCCTGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp TCAGGCCCCGCCGCGGTGGTCTTGGGAGCGGCGCCGTaGCGTCCTCCCAGCCAGCCTCAGTCTCTTAATCTA +
Preference number: 6 (lower is better)
Translates to: SGPAAVVLGAAP*RPPSQPQSLNL
Trigger: TAGATTAAGAGACTGAGGCTGGCTGGGAGGACGCCACGGCGCCGCTCCCAAGACCACCGCGGCGGGGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444368.1
CDS GCA 72 bp TGGAAGGCCCGCTCGGGGATGAGGTCGGAGTCGGACTaGTTCCTCCTCACGTGGACCGCGCTGCAGGGTACA +
Preference number: 6 (lower is better)
Translates to: WKARSGMRSESD*FLLTWTALQGT
Trigger: TGTACCCTGCAGCGCGGTCCACGTGAGGAGGAAGCAGTCCGACTCCGACCTCATCCCCGAGCGGGCCTTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS GCA 72 bp ATGTCTACTGTGACCTCGCAGCTCCGAGGGGCCGGCTaGAGAAGCACGGACTCTCCCCGTGCCGCATTCCTG +
Preference number: 6 (lower is better)
Translates to: MSTVTSQLRGAG*RSTDSPRAAFL
Trigger: CAGGAATGCGGCACGGGGAGAGTCCGTGCTTCTGCAGCCGGCCCCTCGGAGCTGCGAGGTCACAGTAGACAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS TCA 72 bp ACAGGAGCGCAGGGGAGATGGCCATCATGTCTACTGTaGCCTCGCAGCTCCGAGGGGCCGGCTGCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: TGAQGRWPSCLL*PRSSEGPAAEA
Trigger: TGCTTCTGCAGCCGGCCCCTCGGAGCTGCGAGGTCACAGTAGACATGATGGCCATCTCCCCTGCGCTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS GCA 72 bp AACAACAGAGGGGCCGCGGCATGGGGCTCTGATTGGTaGCGAGTGCGAATTCCCGCTGCAGCCTCAGTGTCG +
Preference number: 6 (lower is better)
Translates to: NNRGAAAWGSDW*RVRIPAAASVS
Trigger: CGACACTGAGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CAA 72 bp AGGCTGTGCCGGTCTTCTAAAGCCCTGAGTTTCAGCTaGGGCCCGTACTCAGGCGCGGAGAGGAGTCGGGGC +
Preference number: 6 (lower is better)
Translates to: RLCRSSKALSFS*GPYSGAERSRG
Trigger: GCCCCGACTCCTCTCCGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CAA 90 bp ACGGACTGGAGGCTGTGCCGGTCTTCTAAAGCCCTGAGTTTCAGCTaGGGCCCGTACTCAGGCGCGGAGAGGAGTCGGGGCGCCTTGAGA +
Preference number: 6 (lower is better)
Translates to: TDWRLCRSSKALSFS*GPYSGAERSRGALR
Trigger: TCTCAAGGCGCCCCGACTCCTCTCCGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS TCA 72 bp AGTCTGAAACAACAGAGGGGCCGCGGCATGGGGCTCTaGTTGGTGCCGAGTGCGAATTCCCGCTGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SLKQQRGRGMGL*LVPSANSRCSL
Trigger: GAGGCTGCAGCGGGAATTCGCACTCGGCACCAATCAGAGCCCCATGCCGCGGCCCCTCTGTTGTTTCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS TCA 72 bp CCACGGACTGGAGGCTGTGCCGGTCTTCTAAAGCCCTaGGTTTCAGCTTGGGCCCGTACTCAGGCGCGGAGA +
Preference number: 6 (lower is better)
Translates to: PRTGGCAGLLKP*VSAWARTQARR
Trigger: TCTCCGCGCCTGAGTACGGGCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp ACTTCTTGTTTCGGCTCTGCATCTGGATCGTGGCGATaGAGGCAAACAGCTCCTCGGCGGGCAGGTCCTCGG +
Preference number: 6 (lower is better)
Translates to: TSCFGSASGSWR*RQTAPRRAGPR
Trigger: CCGAGGACCTGCCCGCCGAGGAGCTGTTTGCCTCCATCGCCACGATCCAGATGCAGAGCCGAAACAAGAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CAA 72 bp CGCGGAGAGGAGTCGGGGCGCCTTGAGATTGACGTGTaGCAGGTTCTGAAGGGGGTTTCCTGGTCGACCATC +
Preference number: 6 (lower is better)
Translates to: RGEESGRLEIDV*QVLKGVSWSTI
Trigger: GATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCTCTCCGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409757.9
ENST00000427736.1
ENST00000444368.1
ENST00000448507.5
CDS GCA 72 bp GGATGTCCTCGAACAGCTTCAGGATGCCCAGGGCCGTaGGGAACAGGAACTCTTCCCCATCGCGACAGAACA +
Preference number: 6 (lower is better)
Translates to: GCPRTASGCPGP*GTGTLPHRDRT
Trigger: TGTTCTGTCGCGATGGGGAAGAGTTCCTGTTCCGCACGGCCCTGGGCATCCTGAAGCTGTTCGAGGACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 72 bp AGGGTAGGAATCCCCGAGTCCACGGACTGGAGGCTGTaGCGGTCTTCTAAAGCCCTGAGTTTCAGCTTGGGC +
Preference number: 6 (lower is better)
Translates to: RVGIPESTDWRL*RSSKALSFSLG
Trigger: GCCCAAGCTGAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGATTCCTACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS GCA 72 bp CAAGACTGGACACGCTGCAGACGGAGACATCATCGCTaGGGGTCAGGGCTTTGGAGGTCGGGCTATAGAGCT +
Preference number: 6 (lower is better)
Translates to: QDWTRCRRRHHR*GSGLWRSGYRA
Trigger: AGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCGTCTGCAGCGTGTCCAGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CCA 72 bp CCGATCTCCAGGGTAGGAATCCCCGAGTCCACGGACTaGAGGCTGTGCCGGTCTTCTAAAGCCCTGAGTTTC +
Preference number: 6 (lower is better)
Translates to: PISRVGIPESTD*RLCRSSKALSF
Trigger: GAAACTCAGGGCTTTAGAAGACCGGCACAGCCTCCAGTCCGTGGACTCGGGGATTCCTACCCTGGAGATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000444368.1
ENST00000448507.5
CDS CAA 72 bp TCAGAGCCTCCTGTGCTAAGGGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATGTCAAAGAGCTCGTGG +
Preference number: 6 (lower is better)
Translates to: SEPPVLRDRHLS*ARARQMSKSSW
Trigger: CCACGAGCTCTTTGACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTCCCTTAGCACAGGAGGCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CAA 90 bp GTACTCAGGCGCGGAGAGGAGTCGGGGCGCCTTGAGATTGACGTGTaGCAGGTTCTGAAGGGGGTTTCCTGGTCGACCATCCAGAATACC +
Preference number: 6 (lower is better)
Translates to: VLRRGEESGRLEIDV*QVLKGVSWSTIQNT
Trigger: GGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTCAAGGCGCCCCGACTCCTCTCCGCGCCTGAGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409757.9
ENST00000427736.1
ENST00000444368.1
ENST00000448507.5
CDS TCA 72 bp CCTCGGGCAGCCGGGTCAGGAACTGGGCCATGTGAATaGAGTCCATCTTGGTCAGGATGTCCTCGAACAGCT +
Preference number: 6 (lower is better)
Translates to: PRAAGSGTGPCE*SPSWSGCPRTA
Trigger: AGCTGTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCCGGCTGCCCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS TCA 72 bp AGGTCCTCGGGCAGCCGGGTCAGGAACTGGGCCATGTaGATGAAGTCCATCTTGGTCAGGATGTCCTCGAAC +
Preference number: 6 (lower is better)
Translates to: RSSGSRVRNWAM*MKSILVRMSSN
Trigger: GTTCGAGGACATCCTGACCAAGATGGACTTCATTCACATGGCCCAGTTCCTGACCCGGCTGCCCGAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 72 bp AGAGCTTTACCGAGTCATAGCCTGTCCTGGGAAACGTaGAGGATTTGCGCACGCTCTGTTCCCGCTCGGTGC +
Preference number: 6 (lower is better)
Translates to: RALPSHSLSWET*RICARSVPARC
Trigger: GCACCGAGCGGGAACAGAGCGTGCGCAAATCCTCCACGTTTCCCAGGACAGGCTATGACTCGGTAAAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS TCA 72 bp AGTCGGGGCGCCTTGAGATTGACGTGTTGCAGGTTCTaGAGGGGGTTTCCTGGTCGACCATCCAGAATACCC +
Preference number: 6 (lower is better)
Translates to: SRGALRLTCCRF*RGFPGRPSRIP
Trigger: GGGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTCAAGGCGCCCCGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000409757.9
ENST00000427736.1
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp TGCAGACGGAGACATCATCGCTGCGGGTCAGGGCTTTaGAGGTCGGGCTATAGAGCTTTACCGAGTCATAGC +
Preference number: 6 (lower is better)
Translates to: CRRRHHRCGSGL*RSGYRALPSHS
Trigger: GCTATGACTCGGTAAAGCTCTATAGCCCGACCTCCAAAGCCCTGACCCGCAGCGATGATGTCTCCGTCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CCA 72 bp TCGGGCTATAGAGCTTTACCGAGTCATAGCCTGTCCTaGGAAACGTGGAGGATTTGCGCACGCTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: SGYRALPSHSLS*ETWRICARSVP
Trigger: GGGAACAGAGCGTGCGCAAATCCTCCACGTTTCCCAGGACAGGCTATGACTCGGTAAAGCTCTATAGCCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CAA 90 bp TTCTCCACTTCAGAGCCTCCTGTGCTAAGGGACCGCCACCTCTCCTaGGCTCGGGCAAGACAGATGTCAAAGAGCTCGTGGGTGATATTT +
Preference number: 6 (lower is better)
Translates to: FSTSEPPVLRDRHLS*ARARQMSKSSWVIF
Trigger: AAATATCACCCACGAGCTCTTTGACATCTGTCTTGCCCGAGCCAAGGAGAGGTGGCGGTCCCTTAGCACAGGAGGCTCTGAAGTGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CAA 90 bp CCCCAGGATCATGCAGGCCACTCACCGTGGGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAGACTTTGCCTCTCACACTTGGAGGG +
Preference number: 6 (lower is better)
Translates to: PQDHAGHSPWVIFNS*PMAKLQTLPLTLGG
Trigger: CCCTCCAAGTGTGAGAGGCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGATCCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS TCA 72 bp GGACTCCCCAGGATCATGCAGGCCACTCACCGTGGGTaGTATTTAACTCGTTGCCAATGGCTAAGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: GLPRIMQATHRG*YLTRCQWLSSR
Trigger: TCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGATCCTGGGGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CCA 72 bp GAGATTGACGTGTTGCAGGTTCTGAAGGGGGTTTCCTaGTCGACCATCCAGAATACCCATGAAGGCTACGCC +
Preference number: 6 (lower is better)
Translates to: EIDVLQVLKGVS*STIQNTHEGYA
Trigger: GGCGTAGCCTTCATGGGTATTCTGGATGGTCGACCAGGAAACCCCCTTCAGAACCTGCAACACGTCAATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000409757.9
ENST00000427736.1
ENST00000444368.1
ENST00000448507.5
CDS CCA 72 bp AGGTGGACTCCCCAGGATCATGCAGGCCACTCACCGTaGGTGATATTTAACTCGTTGCCAATGGCTAAGCTC +
Preference number: 6 (lower is better)
Translates to: RWTPQDHAGHSP*VIFNSLPMAKL
Trigger: GAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATGATCCTGGGGAGTCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CAA 72 bp TGCTTTGGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTaGTCTTCATATTCCATGAACGCCGGGGCCTTAGAG +
Preference number: 6 (lower is better)
Translates to: CFGEGGLLGLPA*SSYSMNAGALE
Trigger: CTCTAAGGCCCCGGCGTTCATGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451522.6
CDS CAA 72 bp TGCTTTGGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTaGTCTTCATATTCCAGGGAGGAGAGCGCATCAGCA +
Preference number: 6 (lower is better)
Translates to: CFGEGGLLGLPA*SSYSREESASA
Trigger: TGCTGATGCGCTCTCCTCCCTGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS GCA 72 bp CTGCTGTCTGTGCTTCTGAGCTTCTTCAGCTGGTTTTaGTGGGAGATTTGCTGGTCTGTCCTCGAGGATGAG +
Preference number: 6 (lower is better)
Translates to: LLSVLLSFFSWF*WEICWSVLEDE
Trigger: CTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAACCAGCTGAAGAAGCTCAGAAGCACAGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS GCA 72 bp CCAATGCTTTCCTCGACTCTGCATCTTTCTTCCAGCTaGTTCTTCCTTCGCTGGGCTTCTTTCAGCTCTCGC +
Preference number: 6 (lower is better)
Translates to: PMLSSTLHLSSS*FFLRWASFSSR
Trigger: GCGAGAGCTGAAAGAAGCCCAGCGAAGGAAGAAGCAGCTGGAAGAAAGATGCAGAGTCGAGGAAAGCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS CAA 90 bp TGCTGGTGTAAGCCACGGGTTTCCTTGATAGAGCTCAAGGTGACGTaGGTAAACTGTGGGTCATCGTCATTCTCCAGGGTCACAATGGCA +
Preference number: 6 (lower is better)
Translates to: CWCKPRVSLIELKVT*VNCGSSSFSRVTMA
Trigger: TGCCATTGTGACCCTGGAGAATGACGATGACCCACAGTTTACCAACGTCACCTTGAGCTCTATCAAGGAAACCCGTGGCTTACACCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CAA 72 bp CCATTTGTAGAGGTGGAGAGTTTTCCATCAGTCATCTaGGTCCAAGGAGAAACGGAGTTAGCGCGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: PFVEVESFPSVI*VQGETELARLR
Trigger: TCGGAGCCGCGCTAACTCCGTTTCTCCTTGGACCAAGATGACTGATGGAAAACTCTCCACCTCTACAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409757.9
CDS CAA 72 bp AAGCCACGGGTTTCCTTGATAGAGCTCAAGGTGACGTaGGTAAACTGTGGGTCATCGTCATTCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: KPRVSLIELKVT*VNCGSSSFSRV
Trigger: GACCCTGGAGAATGACGATGACCCACAGTTTACCAACGTCACCTTGAGCTCTATCAAGGAAACCCGTGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CAA 72 bp CATGCAGGCCACTCACCGTGGGTGATATTTAACTCGTaGCCAATGGCTAAGCTCCAGACTTTGCCTCTCACA +
Preference number: 6 (lower is better)
Translates to: HAGHSPWVIFNS*PMAKLQTLPLT
Trigger: TGTGAGAGGCAAAGTCTGGAGCTTAGCCATTGGCAACGAGTTAAATATCACCCACGGTGAGTGGCCTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS TCA 72 bp GTTTTGCTGGGAGATTTGCTGGTCTGTCCTCGAGGATaGGTGCGGTGGTGGAAAGTGGTTCAAAGTCAAGAT +
Preference number: 6 (lower is better)
Translates to: VLLGDLLVCPRG*VRWWKVVQSQD
Trigger: ATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS GCA 72 bp TGCTGGGAGATTTGCTGGTCTGTCCTCGAGGATGAGTaGGGTGGTGGAAAGTGGTTCAAAGTCAAGATTCTT +
Preference number: 6 (lower is better)
Translates to: CWEICWSVLEDE*GGGKWFKVKIL
Trigger: AAGAATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCAGCAAATCTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS GCA 72 bp CTCCAGACTTTGCCTCTCACACTTGGAGGGATTCCCTaGCACCATAAATCTCGAACTTTTCTAGAGCACCAC +
Preference number: 6 (lower is better)
Translates to: LQTLPLTLGGIP*HHKSRTFLEHH
Trigger: GTGGTGCTCTAGAAAAGTTCGAGATTTATGGTGGCAGGGAATCCCTCCAAGTGTGAGAGGCAAAGTCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS CCA 72 bp TCTCCTGGTCTCTCAAAAGACACAGATTCGTGGCAATaGCTGCCATTCTTTCCAACAGGGCAAAAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: SPGLSKDTDSWQ*LPFFPTGQKGE
Trigger: CTCTCCCTTTTGCCCTGTTGGAAAGAATGGCAGCCATTGCCACGAATCTGTGTCTTTTGAGAGACCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CAA 90 bp TCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCATGAACGCCGGG +
Preference number: 6 (lower is better)
Translates to: SKSRFFLTFCFGEGG*LGLPALSSYSMNAG
Trigger: CCCGGCGTTCATGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451522.6
CDS CAA 90 bp TCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCAGGGAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SKSRFFLTFCFGEGG*LGLPALSSYSREES
Trigger: GCTCTCCTCCCTGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS TCA 72 bp CTGCAGTATCTAAGTTCAAGATCAACACTGCTGCTATaGAGGACATGCCCTGGACATAACCCACATCTGGCC +
Preference number: 6 (lower is better)
Translates to: LQYLSSRSTLLL*RTCPGHNPHLA
Trigger: GGCCAGATGTGGGTTATGTCCAGGGCATGTCCTTCATAGCAGCAGTGTTGATCTTGAACTTAGATACTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 72 bp GAAAGTGGTTCAAAGTCAAGATTCTTCCTCACATTCTaGTTTGGAGAGGGTGGCTTGCTAGGTCTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ESGSKSRFFLTF*FGEGGLLGLPA
Trigger: GGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS GCA 72 bp CTGGTCTCTCAAAAGACACAGATTCGTGGCAATGGCTaGCATTCTTTCCAACAGGGCAAAAGGGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: LVSQKTQIRGNG*HSFQQGKRERR
Trigger: TCTTCTCTCCCTTTTGCCCTGTTGGAAAGAATGGCAGCCATTGCCACGAATCTGTGTCTTTTGAGAGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467966.1
CDS CCA 72 bp TGGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTTTaGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTTGTC +
Preference number: 6 (lower is better)
Translates to: WFKVKILPHILL*RGWLARSSSLV
Trigger: GACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 72 bp TGGTCTGTCCTCGAGGATGAGTGCGGTGGTGGAAAGTaGTTCAAAGTCAAGATTCTTCCTCACATTCTGCTT +
Preference number: 6 (lower is better)
Translates to: WSVLEDECGGGK*FKVKILPHILL
Trigger: AAGCAGAATGTGAGGAAGAATCTTGACTTTGAACCACTTTCCACCACCGCACTCATCCTCGAGGACAGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
ENST00000467966.1
CDS CCA 72 bp TGCTATGAAGGACATGCCCTGGACATAACCCACATCTaGCCGGTAACAAGTATAAGCGCCCAAAATACTGTG +
Preference number: 6 (lower is better)
Translates to: CYEGHALDITHI*PVTSISAQNTV
Trigger: CACAGTATTTTGGGCGCTTATACTTGTTACCGGCCAGATGTGGGTTATGTCCAGGGCATGTCCTTCATAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000439515.2
ENST00000446947.6
ENST00000448507.5
ENST00000451522.6
CDS CCA 72 bp TTCCTTGATAGAGCTCAAGGTGACGTTGGTAAACTGTaGGTCATCGTCATTCTCCAGGGTCACAATGGCACT +
Preference number: 6 (lower is better)
Translates to: FLDRAQGDVGKL*VIVILQGHNGT
Trigger: AGTGCCATTGTGACCCTGGAGAATGACGATGACCCACAGTTTACCAACGTCACCTTGAGCTCTATCAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CAA 72 bp AGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCAGG +
Preference number: 6 (lower is better)
Translates to: RFFLTFCFGEGG*LGLPALSSYSR
Trigger: CCTGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446947.6
CDS CAA 90 bp CGGAGTGGCGCTTTCCCAAATAACTTCCATCCCAAGTCATTGTGTTaGTCAAGCCTTGCACTTTGTTTTCTAGCAAGCAAGTTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: RSGAFPNNFHPKSLC*SSLALCFLASKFLS
Trigger: GGACAGGAACTTGCTTGCTAGAAAACAAAGTGCAAGGCTTGACAAACACAATGACTTGGGATGGAAGTTATTTGGGAAAGCGCCACTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000410031.5
CDS CAA 72 bp AGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCTTC +
Preference number: 6 (lower is better)
Translates to: RFFLTFCFGEGG*LGLPALSSYSF
Trigger: GAAGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CAA 72 bp AGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCATG +
Preference number: 6 (lower is better)
Translates to: RFFLTFCFGEGG*LGLPALSSYSM
Trigger: CATGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451522.6
CDS CAA 90 bp CGGAGTGGCGCTTTCCCAAATAACTTCCATCCCAAGTCATTGTGTTaGTCAAGCCTTGCACTTTGTTTTCTAGCAAGCAAGTTCCTTGCA +
Preference number: 6 (lower is better)
Translates to: RSGAFPNNFHPKSLC*SSLALCFLASKFLA
Trigger: TGCAAGGAACTTGCTTGCTAGAAAACAAAGTGCAAGGCTTGACAAACACAATGACTTGGGATGGAAGTTATTTGGGAAAGCGCCACTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000409757.9
ENST00000448507.5
CDS CAA 72 bp TGCTTTGGAGAGGGTGGCTTGCTAGGTCTTCCAGCCTaGTCTTCATATTCCTTCTGTATTCTCTTTGAATCC +
Preference number: 6 (lower is better)
Translates to: CFGEGGLLGLPA*SSYSFCILFES
Trigger: GGATTCAAAGAGAATACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CAA 90 bp TTCTCTCGGAGTGGCGCTTTCCCAAATAACTTCCATCCCAAGTCATaGTGTTTGTCAAGCCTTGCACTTTGTTTTCTAGCAAGCAAGTTC +
Preference number: 6 (lower is better)
Translates to: FSRSGAFPNNFHPKS*CLSSLALCFLASKF
Trigger: GAACTTGCTTGCTAGAAAACAAAGTGCAAGGCTTGACAAACACAATGACTTGGGATGGAAGTTATTTGGGAAAGCGCCACTCCGAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CAA 90 bp TCAAAGTCAAGATTCTTCCTCACATTCTGCTTTGGAGAGGGTGGCTaGCTAGGTCTTCCAGCCTTGTCTTCATATTCCTTCTGTATTCTC +
Preference number: 6 (lower is better)
Translates to: SKSRFFLTFCFGEGG*LGLPALSSYSFCIL
Trigger: GAGAATACAGAAGGAATATGAAGACAAGGCTGGAAGACCTAGCAAGCCACCCTCTCCAAAGCAGAATGTGAGGAAGAATCTTGACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CCA 72 bp TCTTCATATTCCTTCTGTATTCTCTTTGAATCCTTCTaGGCATTCTCTCGGAGTGGCGCTTTCCCAAATAAC +
Preference number: 6 (lower is better)
Translates to: SSYSFCILFESF*AFSRSGAFPNN
Trigger: GTTATTTGGGAAAGCGCCACTCCGAGAGAATGCCCAGAAGGATTCAAAGAGAATACAGAAGGAATATGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5
CDS CAA 72 bp AGTGGCGCTTTCCCAAATAACTTCCATCCCAAGTCATaGTGTTTGTCAAGCCTTGCACTTTGTTTTCTAGCA +
Preference number: 6 (lower is better)
Translates to: SGAFPNNFHPKS*CLSSLALCFLA
Trigger: TGCTAGAAAACAAAGTGCAAGGCTTGACAAACACAATGACTTGGGATGGAAGTTATTTGGGAAAGCGCCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000409757.9
ENST00000410031.5
ENST00000448507.5