RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D13 (Homo sapiens)

Ensembl gene IDs: ENSG00000107021

Ensembl transcript IDs: ENST00000223865.8, ENST00000372648.10, ENST00000466056.1, ENST00000475097.5

Found 455 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCATaGCCTGGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAGGCTGGG +
Preference number: 1 (lower is better)
Translates to: AWRQKEHGTVCPQWA*PGSRADPVASPQAG
Trigger: CCCAGCCTGAGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp AGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTaGGCATGGCCTGGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAG +
Preference number: 1 (lower is better)
Translates to: SWAWRQKEHGTVCPQ*AWPGSRADPVASPQ
Trigger: CTGAGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAGGCTGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: AAEGARHSVSPVGMA*VSGRSCGFPSGWVP
Trigger: AGGAACCCAGCCTGAGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GCAGGGGTCAGAGAAGGCCCTGCACCTCCCTCAGCCCGCAGCGGGTaGAGGGGTACACAGAGGCACAGACATGGCCCTCCTGGAACTGGC +
Preference number: 1 (lower is better)
Translates to: AGVREGPAPPSARSG*RGTQRHRHGPPGTG
Trigger: GCCAGTTCCAGGAGGGCCATGTCTGTGCCTCTGTGTACCCCTCCACCCGCTGCGGGCTGAGGGAGGTGCAGGGCCTTCTCTGACCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTaGGAACAGCTCAGGCAGGGGTCAGAGAAGGCCCTGCACCTCCCT +
Preference number: 1 (lower is better)
Translates to: GSGQLPLLRVHLLQP*EQLRQGSEKALHLP
Trigger: AGGGAGGTGCAGGGCCTTCTCTGACCCCTGCCTGAGCTGTTCCCAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGCATGGCCTGGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAGGCTaGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGG +
Preference number: 1 (lower is better)
Translates to: GMAWVSGRSCGFPSG*VPTGFYVSREPGHR
Trigger: CCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCAGCCTGAGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGACTCCCTCCCAGTTGGGAGGACCTAGGAGCCAGGGCTGGGGGATaGGAACAGGAGGCAAAGGCCAAGCTTGACCTCCAGGGGCCTTGC +
Preference number: 1 (lower is better)
Translates to: GLPPSWEDLGARAGG*EQEAKAKLDLQGPC
Trigger: GCAAGGCCCCTGGAGGTCAAGCTTGGCCTTTGCCTCCTGTTCCCATCCCCCAGCCCTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp CCGCAGCGGGTGGAGGGGTACACAGAGGCACAGACATGGCCCTCCTaGAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGC +
Preference number: 1 (lower is better)
Translates to: PQRVEGYTEAQTWPS*NWQDPGPLSSATPG
Trigger: GCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTCTGTGTACCCCTCCACCCGCTGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp TCCCTCAGCCCGCAGCGGGTGGAGGGGTACACAGAGGCACAGACATaGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCT +
Preference number: 1 (lower is better)
Translates to: SLSPQRVEGYTEAQT*PSWNWQDPGPLSSA
Trigger: AGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTCTGTGTACCCCTCCACCCGCTGCGGGCTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAGTGGAGCCCAGGAGAAGACCAGAAG +
Preference number: 1 (lower is better)
Translates to: VEQPKCPAQKRFLAH*PSTSPEWSPGEDQK
Trigger: CTTCTGGTCTTCTCCTGGGCTCCACTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGCCTGACTCCTGCCAGCCAGTCTGGAGGACGAGGGTCCTCACTATaGCACCCGGCTTCCGGACGCAAACCTTGTACAAGGAGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: GLTPASQSGGRGSSL*HPASGRKPCTRREV
Trigger: CACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGCCATAGTGAGGACCCTCGTCCTCCAGACTGGCTGGCAGGAGTCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 90 bp CCGGCTTCCGGACGCAAACCTTGTACAAGGAGGGAGGTGACTTGGTaGGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGC +
Preference number: 1 (lower is better)
Translates to: PASGRKPCTRREVTW*ELGVASCPCSGYTC
Trigger: GCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 90 bp CAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTaGCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCCAAGCACCTCC +
Preference number: 1 (lower is better)
Translates to: QDSAFSVAFPVEQPK*PAQKRFLAHWPSTS
Trigger: GGAGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 90 bp TATGGCACCCGGCTTCCGGACGCAAACCTTGTACAAGGAGGGAGGTaGCTTGGTGAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGT +
Preference number: 1 (lower is better)
Translates to: YGTRLPDANLVQGGR*LGENWEWPAAPAQG
Trigger: ACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTaGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATT +
Preference number: 1 (lower is better)
Translates to: GETDGRTQLSVSPSL*SSRSAPLRSGFWPI
Trigger: AATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp TCAAAGGAAAAGCCTGGTAGAAGAGCCACCTGGGGAAGCCTTTCCTaGCCCAAAGCCGGGCTTGGAAGGGCAGCGAGAAGTCCTGCCCAC +
Preference number: 1 (lower is better)
Translates to: SKEKPGRRATWGSLS*PKAGLGRAARSPAH
Trigger: GTGGGCAGGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCAGGTGGCTCTTCTACCAGGCTTTTCCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GAAATCCAGGCGGCATCAAAGGAAAAGCCTGGTAGAAGAGCCACCTaGGGAAGCCTTTCCTGGCCCAAAGCCGGGCTTGGAAGGGCAGCG +
Preference number: 1 (lower is better)
Translates to: EIQAASKEKPGRRAT*GSLSWPKAGLGRAA
Trigger: CGCTGCCCTTCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCAGGTGGCTCTTCTACCAGGCTTTTCCTTTGATGCCGCCTGGATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp TGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTaGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: WGLGPTFTPTDYRHL*VRQTAGLSFQCRLP
Trigger: GGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 90 bp GACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTaGGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: DLGPHSHRPTTDICG*DRRQDSAFSVAFPV
Trigger: CACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp GGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTaGGACCTGGAAGCCGAGGGAATGACAACTCTTCTGAAGCAATGG +
Preference number: 1 (lower is better)
Translates to: GPTCPLWDSLNPTLG*DLEAEGMTTLLKQW
Trigger: CCATTGCTTCAGAAGAGTTGTCATTCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp CACACACACACACACACACACACACGGAGAAGATGCCTGGGGACTTaGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAG +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTRRRCLGT*AHIHTDRLQTSVGE
Trigger: CTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACGGAGAAGATaGCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACA +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHTRRR*LGTWAHIHTDRLQT
Trigger: TGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp CACACACACACACACACACACACACACACACACGGAGAAGATGCCTaGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTG +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTHGEDA*GLGPTFTPTDYRHL
Trigger: CAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 90 bp CAGGTGAGCAGGAAGCATCATGCCTCTGCCTCATCCTGGAGGTCCTaGAGTCAGCCCAGTTCTCTTCCCATCTTTACACTCAATTCCAGT +
Preference number: 1 (lower is better)
Translates to: QVSRKHHASASSWRS*SQPSSLPIFTLNSS
Trigger: ACTGGAATTGAGTGTAAAGATGGGAAGAGAACTGGGCTGACTCCAGGACCTCCAGGATGAGGCAGAGGCATGATGCTTCCTGCTCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 90 bp TTGACCTTCATCTCAAGGTCAAGGAGAGGGCACTTGACCCAACTCTaGCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAG +
Preference number: 1 (lower is better)
Translates to: LTFISRSRRGHLTQL*QRGKVMVIQVVWFQ
Trigger: CTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTGACCTTGAGATGAAGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 90 bp TTCCTAGAAGCATGGGGAGAAGAGGCTGACTTTGATCTTGGAAAATaGAGAGGATCTTGTCTCCAACTCCTTTCTCCCTTCCTATACCCA +
Preference number: 1 (lower is better)
Translates to: FLEAWGEEADFDLGK*RGSCLQLLSPFLYP
Trigger: TGGGTATAGGAAGGGAGAAAGGAGTTGGAGACAAGATCCTCTTCATTTTCCAAGATCAAAGTCAGCCTCTTCTCCCCATGCTTCTAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCGGGCAGGTGGGGAGCTaGGCGTGGCGGCAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGGQVGS*AWRQKE
Trigger: CTCCTTCTGCCGCCACGCCCAGCTCCCCACCTGCCC...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGGGTCAGAGAAGGCCCTaGACCTCCCTCAGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALGQRRP*TSLSPQ
Trigger: CTGCGGGCTGAGGGAGGTGCAGGGCCTTCTCTGACC...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGAGAGTGCAGGGCAGGTaGGGAGCTGGGCGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLRVQGR*GAGRGG
Trigger: GCCGCCACGCCCAGCTCCCCACCTGCCCTGCACTCT...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCTGGGAGTGGCCAGCTaGCCCTGCTCAGGGTACACC +
Preference number: 2 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRLGVAS*PCSGYT
Trigger: GGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCTGGGGCCTGACTCCTaGCAGCCAGTCTGGAGGACG +
Preference number: 2 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRLGPDS*QPVWRT
Trigger: CGTCCTCCAGACTGGCTGGCAGGAGTCAGGCCCCAG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCGCCAGGGCTGGGGGATaGGAACAGGAGGCAAAGGCC +
Preference number: 2 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGARAGG*EQEAKA
Trigger: GGCCTTTGCCTCCTGTTCCCATCCCCCAGCCCTGGC...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGCACACACGGAGAAGATaGCTGGGGACTTGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALHTRRR*LGTWAH
Trigger: GTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTG...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGCCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGT +
Preference number: 2 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGPVGMA*VSGRSC
Trigger: ACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGG...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGT +
Preference number: 2 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWPVGMA*VSGRSC
Trigger: ACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGG...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCAGTGGGGAGCTGGGCGTaGCGGCAGAAGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGAVGSWA*RQKEHG
Trigger: GCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCCAC...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGACAGTGTGTCCCCAGTaGGCATGGCCTGGGTCTCGG +
Preference number: 2 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWTVCPQ*AWPGSR
Trigger: CCGAGACCCAGGCCATGCCCACTGGGGACACACTGT...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACAGAGTGCAGGGCAGGTaGGGAGCTGGGCGTGGCGGC +
Preference number: 2 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHRVQGR*GAGRGG
Trigger: GCCGCCACGCCCAGCTCCCCACCTGCCCTGCACTCT...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGAGATGCCTGGGGACTTaGGCCCACATTCACACCGAC +
Preference number: 2 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALRCLGT*AHIHTD
Trigger: GTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCT...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 90 bp GCACCCGGCTTCCGGACGCAAACCTTGTACAAGGAGGGAGGTGACTaGGTGAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACAC +
Preference number: 2 (lower is better)
Translates to: APGFRTQTLYKEGGD*VRTGSGQLPLLRVH
Trigger: GTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCTGTCCCCAGTGGGCATaGCCTGGGTCTCGGGCCGAT +
Preference number: 2 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGCPQWA*PGSRAD
Trigger: ATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACA...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCACGGAGAAGATGCCTaGGGACTTGGGCCCACATTC +
Preference number: 2 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRHGEDA*GLGPTF
Trigger: GAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCCACTCAACCCAACCCTaGGTTGGGACCTGGAAGCCG +
Preference number: 2 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGHSTQP*VGTWKP
Trigger: CGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTG...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTGGCCCTCCTGGAACTaGCAGGACCCAGGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRWPSWN*QDPGPL
Trigger: TAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGCCTCTGCCTCATCCTaGAGGTCCTGGAGTCAGCCC +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAASASS*RSWSQP
Trigger: GGGCTGACTCCAGGACCTCCAGGATGAGGCAGAGGC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 90 bp GTAGAAGAGCCACCTGGGGAAGCCTTTCCTGGCCCAAAGCCGGGCTaGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTT +
Preference number: 2 (lower is better)
Translates to: VEEPPGEAFPGPKPG*EGQREVLPTRLGKL
Trigger: AAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCAGGTGGCTCTTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGCCAAGCACCTCCCCTaGGTGGAGCCCAGGAGAAGA +
Preference number: 2 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLAKHLP*VEPRRR
Trigger: TCTTCTCCTGGGCTCCACTCAGGGGAGGTGCTTGGC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTCAGAACCCTCTAAGTaGGGCACGGAGGACTCCCTC +
Preference number: 2 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRSEPSK*GTEDSL
Trigger: GAGGGAGTCCTCCGTGCCTCACTTAGAGGGTTCTGA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGTGGAGCAGCCGAAGTaGCCCGCTCAGAAGCGGTTT +
Preference number: 2 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVVEQPK*PAQKRF
Trigger: AAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCAC...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAAGCACCTCCCCTGAGTaGAGCCCAGGAGAAGACCAG +
Preference number: 2 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAESTSPE*SPGEDQ
Trigger: CTGGTCTTCTCCTGGGCTCCACTCAGGGGAGGTGCT...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVRFLAH*PSTSPE
Trigger: CTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAATTCCTTCTCCCTCCCTaGGCAGAAAGCAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAEFLLPP*AESRGR
Trigger: CCTGCCCCTGCTTTCTGCCCAGGGAGGGAGAAGGAA...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCTGGGGAAGCCTTTCCTaGCCCAAAGCCGGGCTTGGA +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAWGSLS*PKAGLG
Trigger: TCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCA...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 90 bp AGGACGAGGGTCCTCACTATGGCACCCGGCTTCCGGACGCAAACCTaGTACAAGGAGGGAGGTGACTTGGTGAGAACTGGGAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: RTRVLTMAPGFRTQT*YKEGGDLVRTGSGQ
Trigger: CTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGCCATAGTGAGGACCCTCGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCACAGACATCTGTGGGTaGGACAGACGGCAGGACTCA +
Preference number: 2 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGTDICG*DRRQDS
Trigger: TGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGT...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCAGTGGCCCAAGCTTATaGAGGGGTTGGAGAAGGGGC +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSASGPSL*RGWRRG
Trigger: GCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACT...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGCAGCGAGAAGTCCTaGCCACCAGACTCGGAAAGC +
Preference number: 2 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLGSEKS*PPDSES
Trigger: GCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAACGCTCAGCCAGGACCTaGTCGAAAACCAGGCAGTTC +
Preference number: 2 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAERSART*SKTRQF
Trigger: GAACTGCCTGGTTTTCGAGCAGGTCCTGGCTGAGCG...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCCCTCCTCAGTATCCTaGGCAAAGAGGGCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVPSSVS*AKRAEC
Trigger: GCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGATGCCAGAAACGGCCCTaGCCCAGGAAGGACAACTTC +
Preference number: 2 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGCQKRP*PRKDNF
Trigger: GAAGTTGTCCTTCCTGGGCCAGGGCCGTTTCTGGCA...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCATGCCAGAAACGGCCCTaGCCCAGGAAGGACAACTTC +
Preference number: 2 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSCQKRP*PRKDNF
Trigger: GAAGTTGTCCTTCCTGGGCCAGGGCCGTTTCTGGCA...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAG +
Preference number: 2 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGRFLAH*PSTSPE
Trigger: CTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCG...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCCCCACTTGCCCTTTGTaGGACTCACTCAACCCAACC +
Preference number: 2 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGPTCPL*DSLNPT
Trigger: GGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGG...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGTGGGGAGCTGGGCGTaGCGGCAGAAGGAGCACGGC +
Preference number: 2 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEVGSWA*RQKEHG
Trigger: GCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCCAC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGGGCAGGTGGGGAGCTaGGCGTGGCGGCAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEGQVGS*AWRQKE
Trigger: CTCCTTCTGCCGCCACGCCCAGCTCCCCACCTGCCC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCGTGTCGCCTTCCCTGTaGAGCAGCCGAAGTGCCCCG +
Preference number: 2 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIVSPSL*SSRSAP
Trigger: CGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACAC...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGACTCTTCTGAAGCAATaGGTTCCGACCCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRTLLKQ*VPTLGS
Trigger: TGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGT...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCCCCACTTGCCCTTTGTaGGACTCACTCAACCCAACC +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAPTCPL*DSLNPT
Trigger: GGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGG...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 90 bp GGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTaGGGACCTGGAAGCCGAGGGAATGACAACTCTTCTGAAGCAATG +
Preference number: 2 (lower is better)
Translates to: GPHLPFVGLTQPNPG*GPGSRGNDNSSEAM
Trigger: CATTGCTTCAGAAGAGTTGTCATTCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCTGCCAGCCTCCCAGTaGCAGAAACGGCCCTGGCCC +
Preference number: 2 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQELPASQ*QKRPWP
Trigger: GGGCCAGGGCCGTTTCTGGCACTGGGAGGCTGGCAG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGTCTCCCAAATACTGTaGTCTGGGAGAGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAVSQIL*SGRGDR
Trigger: CCTGTCTCCTCTCCCAGAGCACAGTATTTGGGAGAC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCCCCTCCTCAGTATCCTaGGCAAAGAGGGCAGAGTGC +
Preference number: 2 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDIPSSVS*AKRAEC
Trigger: GCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGG...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCACTCAGAAGCGGTTTCTaGCCCATTGGCCAAGCACCT +
Preference number: 2 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGALRSGF*PIGQAP
Trigger: AGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAG...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGACTACAGACATCTGTaGGTGAGACAGACGGCAGGA +
Preference number: 2 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSADYRHL*VRQTAG
Trigger: TCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAGGACTCCCTCCCAGTTaGGAGGACCTAGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKGLPPS*EDLGAR
Trigger: CCTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCC...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAAATGGGTTCCGACCCTaGGCTCAGAATCAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAENGFRP*AQNQGP
Trigger: AGGACCTTGATTCTGAGCCCAGGGTCGGAACCCATT...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAACTCTTCTGAAGCAATaGGTTCCGACCCTGGGCTCA +
Preference number: 2 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAETLLKQ*VPTLGS
Trigger: TGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGT...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCATGGAGAGAGGAATCATaGAGCAAGACACAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSWREES*SKTQSH
Trigger: GTGGGACTGTGTCTTGCTTCATGATTCCTCTCTCCA...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCCACACACGGAGAAGATaGCTGGGGACTTGGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIHTRRR*LGTWAH
Trigger: GTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTG...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAGAGGAGACAGGCAGGTaGGGAAATCCAGGCGGCATC +
Preference number: 2 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKEETGR*GNPGGI
Trigger: GATGCCGCCTGGATTTCCGCACCTGCCTGTCTCCTC...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCACACCTGCTCCAGCCCTaGGAACAGCTCAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPHLLQP*EQLRQG
Trigger: CCCCTGCCTGAGCTGTTCCCAGGGCTGGAGCAGGTG...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR TCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGCAAGGAGAGGGCACTTaGCCCAACTCTGCCAGCGAG +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQQGEGT*PNSASE
Trigger: CTCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTG...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGTCCTCGGGCCCCACTTaGCCTTTGTGGGACTCACTC +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQSSGPT*PLWDSL
Trigger: GAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGA...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGTGCTCAGGGTACACCTaGTCCAGCCCTGGGAACAGC +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQCSGYT*SSPGNS
Trigger: GCTGTTCCCAGGGCTGGAGCAGGTGTACCCTGAGCA...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGCAGACAAGAGTGAGTaGACTAAAGAGTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLADKSE*TKESWA
Trigger: TGCCCAGGACTCTTTAGTGCACTCACTCTTGTCTGC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACGGCTTCCCCTCAGGCTaGGTTCCTACAGGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHGFPSG*VPTGFY
Trigger: ATAGAAACCTGTAGGAACCCAGCCTGAGGGGAAGCC...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCAGATGCCTGGGGACTTaGGCCCACATTCACACCGAC +
Preference number: 2 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIRCLGT*AHIHTD
Trigger: GTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCT...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGAGCGGGGAGAGGAGGTaGCTCAGGATAAGGCACCCC +
Preference number: 2 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQESGERR*LRIRHP
Trigger: GGGGTGCCTTATCCTGAGCCACCTCCTCTCCCCGCT...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCACAGACATGGCCCTCCTaGAACTGGCAGGACCCAGGG +
Preference number: 2 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPQTWPS*NWQDPG
Trigger: CCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTG...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGTGAGAACTGGGAGTaGCCAGCTGCCCCTGCTCAG +
Preference number: 2 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPGENWE*PAAPAQ
Trigger: CTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACC...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAAACCCAACCCTGGGTTaGGACCTGGAAGCCGAGGGA +
Preference number: 2 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPNPTLG*DLEAEG
Trigger: TCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTT...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGACTACAGACATCTGTaGGTGAGACAGACGGCAGGA +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQDYRHL*VRQTAG
Trigger: TCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGTCTCCCAAATACTGTaGTCTGGGAGAGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEVSQIL*SGRGDR
Trigger: CCTGTCTCCTCTCCCAGAGCACAGTATTTGGGAGAC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCAGACAAGAGTGAGTaGACTAAAGAGTCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQADKSE*TKESWA
Trigger: TGCCCAGGACTCTTTAGTGCACTCACTCTTGTCTGC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGCACTTGACCCAACTCTaGCAGCGAGGCAAAGTAATG +
Preference number: 2 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQHLTQL*QRGKVM
Trigger: CATTACTTTGCCTCGCTGGCAGAGTTGGGTCAAGTG...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGCTTCCCCTCAGGCTaGGTTCCTACAGGTTTCTAT +
Preference number: 2 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPGFPSG*VPTGFY
Trigger: ATAGAAACCTGTAGGAACCCAGCCTGAGGGGAAGCC...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp GGAGCACGGCACAGTGTGTCCCCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAGGC +
Preference number: 3 (lower is better)
Translates to: GARHSVSPVGMA*VSGRSCGFPSG
Trigger: GCCTGAGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp CTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTaGTCCAGCCCTGGGAACAGCTCAGGCAGGGGTCAG +
Preference number: 3 (lower is better)
Translates to: LGVASCPCSGYT*SSPGNSSGRGQ
Trigger: CTGACCCCTGCCTGAGCTGTTCCCAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp TGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTaGGCATGGCCTGGGTCTCGGGCCGATCCTGTGGCT +
Preference number: 3 (lower is better)
Translates to: WRQKEHGTVCPQ*AWPGSRADPVA
Trigger: AGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCATaGCCTGGGTCTCGGGCCGATCCTGTGGCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: QKEHGTVCPQWA*PGSRADPVASP
Trigger: AGGGGAAGCCACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACACACTGTGCCGTGCTCCTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp GCCCAAAGCCGGGCTTGGAAGGGCAGCGAGAAGTCCTaGCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: AQSRAWKGSEKS*PPDSESFGGRR
Trigger: CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CACCTGGGGAAGCCTTTCCTGGCCCAAAGCCGGGCTTaGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCG +
Preference number: 3 (lower is better)
Translates to: HLGKPFLAQSRA*KGSEKSCPPDS
Trigger: CGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAGTGGAGCCCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: PKCPAQKRFLAH*PSTSPEWSPGE
Trigger: TTCTCCTGGGCTCCACTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGAGGCAAAGGCCAAGCTaGACCTCCAGGGGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRRQRPS*TSRGLA
Trigger: AGCAAGGCCCCTGGAGGTCAAGCTTGGCCTTTGCCT...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCTTCCTCGGGCCCCACTaGCCCTTTGTGGGACTCACT +
Preference number: 3 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGFLGPH*PFVGLT
Trigger: AGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAA...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCAAGATGCCTGGGGACTaGGGCCCACATTCACACCGA +
Preference number: 3 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGKMPGD*GPHSHR
Trigger: TCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTT...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCAGGACTCCCTCCCAGTaGGGAGGACCTAGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSARTPSQ*GGPRSQ
Trigger: CTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCCT...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGCCCAAAGCCGGGCTaGGAAGGGCAGCGAGAAGTC +
Preference number: 3 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLGPKPG*EGQREV
Trigger: GACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp GCTTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTaGCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCCA +
Preference number: 3 (lower is better)
Translates to: AFSVAFPVEQPK*PAQKRFLAHWP
Trigger: TGGCCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp GAGGGTGGCCCAGGTGAGCAGGAAGCATCATGCCTCTaGCTCATCCTGGAGGTCCTGGAGTCAGCCCAGTTC +
Preference number: 3 (lower is better)
Translates to: EGGPGEQEASCL*LILEVLESAQF
Trigger: GAACTGGGCTGACTCCAGGACCTCCAGGATGAGGCAGAGGCATGATGCTTCCTGCTCACCTGGGCCACCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp TGGGTCTCGGGCCGATCCTGTGGCTTCCCCTCAGGCTaGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCA +
Preference number: 3 (lower is better)
Translates to: WVSGRSCGFPSG*VPTGFYVSREP
Trigger: TGGCTCCCGGGACACATAGAAACCTGTAGGAACCCAGCCTGAGGGGAAGCCACAGGATCGGCCCGAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp GACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTaGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTC +
Preference number: 3 (lower is better)
Translates to: DGRTQLSVSPSL*SSRSAPLRSGF
Trigger: GAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CCTGCCAGCCAGTCTGGAGGACGAGGGTCCTCACTATaGCACCCGGCTTCCGGACGCAAACCTTGTACAAGG +
Preference number: 3 (lower is better)
Translates to: PASQSGGRGSSL*HPASGRKPCTR
Trigger: CCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGCCATAGTGAGGACCCTCGTCCTCCAGACTGGCTGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp TATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTaGGAGCTCAGCCTAACCAAGGCCTGGTCCCTGTGC +
Preference number: 3 (lower is better)
Translates to: YQGRSFLQAVSC*ELSLTKAWSLC
Trigger: GCACAGGGACCAGGCCTTGGTTAGGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCAAGGCAAAGGCCAAGCTaGACCTCCAGGGGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSRQRPS*TSRGLA
Trigger: AGCAAGGCCCCTGGAGGTCAAGCTTGGCCTTTGCCT...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 72 bp GGACGCAAACCTTGTACAAGGAGGGAGGTGACTTGGTaGGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: GRKPCTRREVTW*ELGVASCPCSG
Trigger: CCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp CATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTaGTGGGAGCTCAGCCTAACCAAGGCCTGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: HYQGRSFLQAVS*WELSLTKAWSL
Trigger: CAGGGACCAGGCCTTGGTTAGGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp GGGTACACAGAGGCACAGACATGGCCCTCCTGGAACTaGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCT +
Preference number: 3 (lower is better)
Translates to: GYTEAQTWPSWN*QDPGPLSSATP
Trigger: AGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTCTGTGTACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCTTCCGGACGCAAACCTaGTACAAGGAGGGAGGTGAC +
Preference number: 3 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGFRTQT*YKEGGD
Trigger: GTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAA...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp ACACACACACACACACACACACACACACGGAGAAGATaGCTGGGGACTTGGGCCCACATTCACACCGACCGA +
Preference number: 3 (lower is better)
Translates to: THTHTHTHTRRR*LGTWAHIHTDR
Trigger: TCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp TCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTaGTCGAAAACCAGGCAGTTCCTAGAAGCATGGGGA +
Preference number: 3 (lower is better)
Translates to: SSTELRARSART*SKTRQFLEAWG
Trigger: TCCCCATGCTTCTAGGAACTGCCTGGTTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp GGGCCCACATTCACACCGACCGACTACAGACATCTGTaGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGT +
Preference number: 3 (lower is better)
Translates to: GPTFTPTDYRHL*VRQTAGLSFQC
Trigger: ACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp ACACACACACACACACACACACACGGAGAAGATGCCTaGGGACTTGGGCCCACATTCACACCGACCGACTAC +
Preference number: 3 (lower is better)
Translates to: THTHTHTHGEDA*GLGPTFTPTDY
Trigger: GTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp TGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTaGGACCTGGAAGCCGAGGGAATGACAACTCTTCTG +
Preference number: 3 (lower is better)
Translates to: CPLWDSLNPTLG*DLEAEGMTTLL
Trigger: CAGAAGAGTTGTCATTCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CTGTGGGGACCTCCCTTGGGCATCTGCTTGAGAATCTaGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGC +
Preference number: 3 (lower is better)
Translates to: LWGPPLGICLRI*GRDIIRAGPFC
Trigger: GCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATGCCCAAGGGAGGTCCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAAAGATGCCTGGGGACTaGGGCCCACATTCACACCGA +
Preference number: 3 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKKMPGD*GPHSHR
Trigger: TCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTT...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGTTCCTCGGGCCCCACTaGCCCTTTGTGGGACTCACT +
Preference number: 3 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQFLGPH*PFVGLT
Trigger: AGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAA...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp ACACACACACACACACGGAGAAGATGCCTGGGGACTTaGGCCCACATTCACACCGACCGACTACAGACATCT +
Preference number: 3 (lower is better)
Translates to: THTHTRRRCLGT*AHIHTDRLQTS
Trigger: AGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGGCCCCACTTGCCCTTaGTGGGACTCACTCAACCCA +
Preference number: 3 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEGPTCP*WDSLNP
Trigger: TGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCACTTACTCAGCAGCATTaGGTTTCCAAGATTTCTGTG +
Preference number: 3 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSLTQQH*VSKISV
Trigger: CACAGAAATCTTGGAAACCAAATGCTGCTGAGTAAG...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CCA 72 bp CTGGAAGCCGAGGGAATGACAACTCTTCTGAAGCAATaGGTTCCGACCCTGGGCTCAGAATCAAGGTCCTTT +
Preference number: 3 (lower is better)
Translates to: LEAEGMTTLLKQ*VPTLGSESRSF
Trigger: AAAGGACCTTGATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCGGCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGCTTACTCAGCAGCATTaGGTTTCCAAGATTTCTGTG +
Preference number: 3 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLLTQQH*VSKISV
Trigger: CACAGAAATCTTGGAAACCAAATGCTGCTGAGTAAG...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR-3UTR CAA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGCTGGTCCCTGTGCTCTaGACCTTCATCTCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQLVPVL*TFISRS
Trigger: TGACCTTGAGATGAAGGTCAAGAGCACAGGGACCAG...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR GCA 72 bp TCTTGTCTCCAACTCCTTTCTCCCTTCCTATACCCATaGCTCATCCCCAGAGCACTTGCCAATGTGCAATAC +
Preference number: 3 (lower is better)
Translates to: SCLQLLSPFLYP*LIPRALANVQY
Trigger: GTATTGCACATTGGCAAGTGCTCTGGGGATGAGGCATGGGTATAGGAAGGGAGAAAGGAGTTGGAGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR TCA 72 bp AAAGCAAACGTTCTGACCCTCTGGAGTGAGACCCGCTaGATTCATACAGCTCAATCTGTAAGTGTCCAAGAT +
Preference number: 3 (lower is better)
Translates to: KANVLTLWSETR*IHTAQSVSVQD
Trigger: ATCTTGGACACTTACAGATTGAGCTGTATGAATTCAGCGGGTCTCACTCCAGAGGGTCAGAACGTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCGGGCAGGTGGGGAGCTaGGCGTGGCGGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGGQVGS*AWRQKE
Trigger: CTCCTTCTGCCGCCACGCCCAGCTCCCCACCTGCCC...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCCTGGGGCCTGACTCCTaGCAGCCAGTCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGLGPDS*QPVWRT
Trigger: CGTCCTCCAGACTGGCTGGCAGGAGTCAGGCCCCAG...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCGGACTCCCTCCCAGTTaGGAGGACCTAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGGLPPS*EDLGAR
Trigger: CCTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCC...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCCAGACATGGCCCTCCTaGAACTGGCAGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGQTWPS*NWQDPG
Trigger: CCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTG...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCTCCTCGGGCCCCACTTaGCCTTTGTGGGACTCACTC +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGSSGPT*PLWDSL
Trigger: GAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGA...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCAGCACCTCCCCTGAGTaGAGCCCAGGAGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGSTSPE*SPGEDQ
Trigger: CTGGTCTTCTCCTGGGCTCCACTCAGGGGAGGTGCT...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCCTGGGTCCCAGGCAGTaGCCCAAGCTTATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGLGPRQ*PKLMKG
Trigger: CCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAG...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCTCTGCTCTTGATTTGTaGCCCCACTCCGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGSALDL*PHSGSG
Trigger: CCCGGAACCGGAGTGGGGTCACAAATCAAGAGCAGA...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000223865.8
CDS-3UTR TCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCTCAGAACCCTCTAAGTaGGGCACGGAGGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGSEPSK*GTEDSL
Trigger: GAGGGAGTCCTCCGTGCCTCACTTAGAGGGTTCTGA...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCTGCCAGCCTCCCAGTaGCAGAAACGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRLPASQ*QKRPWP
Trigger: GGGCCAGGGCCGTTTCTGGCACTGGGAGGCTGGCAG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGCTGGGAGTGGCCAGCTaGCCCTGCTCAGGGTACACC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALLGVAS*PCSGYT
Trigger: GGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAG...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGGGGCAGGTGGGGAGCTaGGCGTGGCGGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRGQVGS*AWRQKE
Trigger: CTCCTTCTGCCGCCACGCCCAGCTCCCCACCTGCCC...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGGCCGCCGGGCTACTTTaGGTCTTGGAGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALAAGLL*VLELLG
Trigger: GCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGC...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGACAGTGTGTCCCCAGTaGGCATGGCCTGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALTVCPQ*AWPGSR
Trigger: CCGAGACCCAGGCCATGCCCACTGGGGACACACTGT...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGAGTGCAGGGCAGGTaGGGAGCTGGGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVRVQGR*GAGRGG
Trigger: GCCGCCACGCCCAGCTCCCCACCTGCCCTGCACTCT...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 72 bp GGCCCCAGAGAGGCTTCCTCGGGCCCCACTTGCCCTTaGTGGGACTCACTCAACCCAACCCTGGGTTGGGAC +
Preference number: 4 (lower is better)
Translates to: GPREASSGPTCP*WDSLNPTLGWD
Trigger: GTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAGCCTCTCTGGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 72 bp CCACCTGGGGAAGCCTTTCCTGGCCCAAAGCCGGGCTaGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTC +
Preference number: 4 (lower is better)
Translates to: PPGEAFPGPKPG*EGQREVLPTRL
Trigger: GAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCGCCGCATATTCACAGTaGAGTCCCCTTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGAAYSQ*SPLPAT
Trigger: AGTTGCTGGAAGGGGACTTCACTGTGAATATGCGGC...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGGGTCAGAGAAGGCCCTaGACCTCCCTCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWGQRRP*TSLSPQ
Trigger: CTGCGGGCTGAGGGAGGTGCAGGGCCTTCTCTGACC...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCTGCAGGCGGTGTCCTaGTGGGAGCTCAGCCTAACC +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRLQAVS*WELSLT
Trigger: GGTTAGGCTGAGCTCCCAGCAGGACACCGCCTGCAG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCGCTTTCTGCAGGATCTaGCAGACATCTGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: GELGVAAEGARHSVSPVGAFCRI*QTSVMG
Trigger: CCCCATCACAGATGTCTGCCAGATCCTGCAGAAAGC...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGGCCAGGGCTGGGGGATaGGAACAGGAGGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRARAGG*EQEAKA
Trigger: GGCCTTTGCCTCCTGTTCCCATCCCCCAGCCCTGGC...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGAACCCAACCCTGGGTTaGGACCTGGAAGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALNPTLG*DLEAEG
Trigger: TCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTT...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGCACCTGCTCCAGCCCTaGGAACAGCTCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRHLLQP*EQLRQG
Trigger: CCCCTGCCTGAGCTGTTCCCAGGGCTGGAGCAGGTG...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGCAGGATGGAGGTCCATaGGGCTCTCTCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALQDGGP*GSLQGK
Trigger: CTTCCCTTGGAGAGAGCCTCATGGACCTCCATCCTG...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGGCACCTCGTTGTCCTTaGAGTACGTGTTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALAPRCP*STCSTG
Trigger: GCCGGTGGAACACGTACTTCAAGGACAACGAGGTGC...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCTCTGGGGGTCCAGGATaGGGAGGCAAGGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGSGGPG*GGKGSQ
Trigger: CTGACTACCCTTGCCTCCTCATCCTGGACCCCCAGA...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGGGAACATGGGCCTCTTaGCGCCGGGCTACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALGTWAS*RRATLS
Trigger: ACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCC...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGCACACACGGAGAAGATaGCTGGGGACTTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRHTRRR*LGTWAH
Trigger: GTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTG...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGCTGCAGGCGGTGTCCTaGTGGGAGCTCAGCCTAACC +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRLQAVS*WELSLT
Trigger: GGTTAGGCTGAGCTCCCAGCAGGACACCGCCTGCAG...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCTTCTCTCCGGAACATaGGCCTCTTGCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWLLSGT*ASCRRA
Trigger: AGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAG...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCTGTCCCCAGTGGGCATaGCCTGGGTCTCGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSACPQWA*PGSRAD
Trigger: ATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACA...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGTGTCCCCAGTGGGCATaGCCTGGGTCTCGGGCCGAT +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVCPQWA*PGSRAD
Trigger: ATCGGCCCGAGACCCAGGCCATGCCCACTGGGGACA...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGCCCTCCTCAGTATCCTaGGCAAAGAGGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALPSSVS*AKRAEC
Trigger: GCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGG...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGTGCCAGAAACGGCCCTaGCCCAGGAAGGACAACTTC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALCQKRP*PRKDNF
Trigger: GAAGTTGTCCTTCCTGGGCCAGGGCCGTTTCTGGCA...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGAGCACCTCCCCTGAGTaGAGCCCAGGAGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRSTSPE*SPGEDQ
Trigger: CTGGTCTTCTCCTGGGCTCCACTCAGGGGAGGTGCT...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAGTGTCGCCTTCCCTGTaGAGCAGCCGAAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAEVSPSL*SSRSAP
Trigger: CGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACAC...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGTGTCGCCTTCCCTGTaGAGCAGCCGAAGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVVSPSL*SSRSAP
Trigger: CGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACAC...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGCAGACATGGCCCTCCTaGAACTGGCAGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRQTWPS*NWQDPG
Trigger: CCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTG...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCTCAGCCCGCAGCGGGTaGAGGGGTACACAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSASARSG*RGTQRH
Trigger: GTGCCTCTGTGTACCCCTCCACCCGCTGCGGGCTGA...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCACCTGCTCCAGCCCTaGGAACAGCTCAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVHLLQP*EQLRQG
Trigger: CCCCTGCCTGAGCTGTTCCCAGGGCTGGAGCAGGTG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCGGTGAGAACTGGGAGTaGCCAGCTGCCCCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGGENWE*PAAPAQ
Trigger: CTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTCACC...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGGCCTCTGCCTCATCCTaGAGGTCCTGGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWASASS*RSWSQP
Trigger: GGGCTGACTCCAGGACCTCCAGGATGAGGCAGAGGC...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTCCACCACCTCCCAGTaGGCCTCACAGCCATTGGGC +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRSTTSQ*ASQPLG
Trigger: GCCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR TCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCTCTGGGGGTCCAGGATaGGGAGGCAAGGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGSGGPG*GGKGSQ
Trigger: CTGACTACCCTTGCCTCCTCATCCTGGACCCCCAGA...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGGCCGCCGGGCTACTTTaGGTCTTGGAGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVAAGLL*VLELLG
Trigger: GCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGC...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAGCCAAGCACCTCCCCTaGGTGGAGCCCAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAEAKHLP*VEPRRR
Trigger: TCTTCTCCTGGGCTCCACTCAGGGGAGGTGCTTGGC...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGCAAGGAGAGGGCACTTaGCCCAACTCTGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLQGEGT*PNSASE
Trigger: CTCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTG...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCTGCCAGCCTCCCAGTaGCAGAAACGGCCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHLPASQ*QKRPWP
Trigger: GGGCCAGGGCCGTTTCTGGCACTGGGAGGCTGGCAG...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGGTGGAGCAGCCGAAGTaGCCCGCTCAGAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRVEQPK*PAQKRF
Trigger: AAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCAC...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGTCCTCGGGCCCCACTTaGCCTTTGTGGGACTCACTC +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGSSGPT*PLWDSL
Trigger: GAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGA...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCTGCTCAGGGTACACCTaGTCCAGCCCTGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGCSGYT*SSPGNS
Trigger: GCTGTTCCCAGGGCTGGAGCAGGTGTACCCTGAGCA...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAAGGGCAGGTCCTTTCTaGAGGCGGTGTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAERAGPF*RRCPAG
Trigger: CCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCT...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTACAGTGTGTCCCCAGTaGGCATGGCCTGGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVTVCPQ*AWPGSR
Trigger: CCGAGACCCAGGCCATGCCCACTGGGGACACACTGT...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWRFLAH*PSTSPE
Trigger: CTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCG...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGGACTCCCTCCCAGTTaGGAGGACCTAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAGLPPS*EDLGAR
Trigger: CCTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGCGAGGGTCCTCACTATaGCACCCGGCTTCCGGACGC +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLRGSSL*HPASGR
Trigger: GCGTCCGGAAGCCGGGTGCCATAGTGAGGACCCTCG...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGGCCCAAAGCCGGGCTTaGAAGGGCAGCGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVAQSRA*KGSEKS
Trigger: GGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGC...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGTGGGGAAGCCTTTCCTaGCCCAAAGCCGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWWGSLS*PKAGLG
Trigger: TCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCA...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGGCCTCTGCCTCATCCTaGAGGTCCTGGAGTCAGCCC +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVASASS*RSWSQP
Trigger: GGGCTGACTCCAGGACCTCCAGGATGAGGCAGAGGC...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGCCAGCTGACAAGTCCTaGAGAGAGGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLPADKS*REGGPG
Trigger: ACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGG...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGCAGGCGGTGTCCTGCTaGGAGCTCAGCCTAACCAAG +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGQAVSC*ELSLTK
Trigger: CTTGGTTAGGCTGAGCTCCCAGCAGGACACCGCCTG...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCAGGGAGGTGACTTGGTaGGAACTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAREVTW*ELGVAS
Trigger: GCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCT...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCAGGGAGCTCATATTTGTaGCCCCACTCCGGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSGSSYL*PHSGSG
Trigger: CCCGGAACCGGAGTGGGGTCACAAATATGAGCTCCC...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR GCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCTCCCCTTCCAGCAACTaGTCCCGGATCAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGSPSSN*SRISMS
Trigger: GCTCATGCTGATCCGGGAGCAGTTGCTGGAAGGGGA...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGATGCTCAGGGTACACCTaGTCCAGCCCTGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGCSGYT*SSPGNS
Trigger: GCTGTTCCCAGGGCTGGAGCAGGTGTACCCTGAGCA...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGAGGAGACAGGCAGGTaGGGAAATCCAGGCGGCATC +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAEETGR*GNPGGI
Trigger: GATGCCGCCTGGATTTCCGCACCTGCCTGTCTCCTC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCCCTCCCTTGGGCATCTaGTTGAGAATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGPPLGI*LRIWGR
Trigger: CCTTCCCCAGATTCTCAAGCAGATGCCCAAGGGAGG...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGGCAGCAAGAACTCCTaGGACAGCAGCAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLGSKNS*DSSSVS
Trigger: GCTGACACTGCTGCTGTCCCAGGAGTTCTTGCTGCC...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCCTTCTCTCCGGAACATaGGCCTCTTGCCGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGLLSGT*ASCRRA
Trigger: AGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAG...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAGTGGGGAGCTGGGCGTaGCGGCAGAAGGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKVGSWA*RQKEHG
Trigger: GCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCCAC...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCGTGGGGAGCTGGGCGTaGCGGCAGAAGGAGCACGGC +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIVGSWA*RQKEHG
Trigger: GCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCCAC...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGCCCTCCTCAGTATCCTaGGCAAAGAGGGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRPSSVS*AKRAEC
Trigger: GCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGG...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCCTCAGAAGCGGTTTCTaGCCCATTGGCCAAGCACCT +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGLRSGF*PIGQAP
Trigger: AGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAG...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTAACCCAACCCTGGGTTaGGACCTGGAAGCCGAGGGA +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVNPTLG*DLEAEG
Trigger: TCCCTCGGCTTCCAGGTCCCAACCCAGGGTTGGGTT...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCCACTCAACCCAACCCTaGGTTGGGACCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAHSTQP*VGTWKP
Trigger: CGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTG...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGACACTCAACCCAACCCTaGGTTGGGACCTGGAAGCCG +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGHSTQP*VGTWKP
Trigger: CGGCTTCCAGGTCCCAACCCAGGGTTGGGTTGAGTG...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAATGGCCCTCCTGGAACTaGCAGGACCCAGGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAEWPSWN*QDPGPL
Trigger: TAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCA...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAATGGGGAAGCCTTTCCTaGCCCAAAGCCGGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAEWGSLS*PKAGLG
Trigger: TCCAAGCCCGGCTTTGGGCCAGGAAAGGCTTCCCCA...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCTGGGTCCCAGGCAGTaGCCCAAGCTTATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVLGPRQ*PKLMKG
Trigger: CCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCAGGATGGAGGTCCATaGGGCTCTCTCCAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVQDGGP*GSLQGK
Trigger: CTTCCCTTGGAGAGAGCCTCATGGACCTCCATCCTG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGAGTCCCAGATGCGGATaGCGTCAGGCAGCAAGAACT +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWSPRCG*RQAART
Trigger: AGTTCTTGCTGCCTGACGTCATCCGCATCTGGGACT...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGTCTGGCAGACATCTGTaGTGGGGTAGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWSGRHL*WGSPAA
Trigger: TGCTGCAGGACTACCCCATCACAGATGTCTGCCAGA...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCAGAACCCTCTAAGTaGGGCACGGAGGACTCCCTC +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVSEPSK*GTEDSL
Trigger: GAGGGAGTCCTCCGTGCCTCACTTAGAGGGTTCTGA...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCGCTCTTGTGCAGACTTaGCATGGTGTTGACTTCCGG +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGALVQT*HGVDFR
Trigger: CCGGAAGTCAACACCATGTCAAGTCTGCACAAGAGC...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR GCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGAGCATACAGCTCCCTCTaGTTGGCCAGGATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGAYSSL*LARMEV
Trigger: GACCTCCATCCTGGCCAAGCAGAGGGAGCTGTATGC...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGGGAACATGGGCCTCTTaGCGCCGGGCTACTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVGTWAS*RRATLS
Trigger: ACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCC...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCGCTCAGCCAGGACCTaGTCGAAAACCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVRSART*SKTRQF
Trigger: GAACTGCCTGGTTTTCGAGCAGGTCCTGGCTGAGCG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGAAGCATCATGCCTCTaGCTCATCCTGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLEASCL*LILEVL
Trigger: CAGGACCTCCAGGATGAGGCAGAGGCATGATGCTTC...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGGAGCAGGAAGCATCATaGCTCTGCCTCATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGEQEAS*LCLILE
Trigger: CTCCAGGATGAGGCAGAGGCATGATGCTTCCTGCTC...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGATTTCCCTCAGGAACTaGGCATACAGCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRISLRN*AYSSLC
Trigger: GCAGAGGGAGCTGTATGCCCAGTTCCTGAGGGAAAT...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGTGGACACACCCATGTTaGCCTTGGCAATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWWTHPC*PWQCQA
Trigger: AGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCA...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCAGGCAGCAAGAACTCCTaGGACAGCAGCAGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSGSKNS*DSSSVS
Trigger: GCTGACACTGCTGCTGTCCCAGGAGTTCTTGCTGCC...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGAGAGTGCAGGGCAGGTaGGGAGCTGGGCGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQRVQGR*GAGRGG
Trigger: GCCGCCACGCCCAGCTCCCCACCTGCCCTGCACTCT...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGCTCAGAAGCGGTTTCTaGCCCATTGGCCAAGCACCT +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGLRSGF*PIGQAP
Trigger: AGGTGCTTGGCCAATGGGCCAGAAACCGCTTCTGAG...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTAGATGCCTGGGGACTTaGGCCCACATTCACACCGAC +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVRCLGT*AHIHTD
Trigger: GTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCT...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGACACGGAGAAGATGCCTaGGGACTTGGGCCCACATTC +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGHGEDA*GLGPTF
Trigger: GAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTG...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCCCAGCTGACAAGTCCTaGAGAGAGGGTGGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGPADKS*REGGPG
Trigger: ACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGG...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGCTTTTCCAATGCAATTaGGGGCTCCTTCAGGACATC +
Preference number: 4 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALLFQCN*GLLQDI
Trigger: GATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAAG...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGTGTCAGGGTTGGGGTTaGGTGGATGGTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLCQGWG*VDGPQK
Trigger: CTTTTGAGGACCATCCACTCAACCCCAACCCTGACA...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTTCCGGGCCACCGTCTaGGATTTCAGTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRFRATV*DFSVVC
Trigger: ACAGACAACACTGAAATCTCAGACGGTGGCCCGGAA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCAAGTCCCAGATGCGGATaGCGTCAGGCAGCAAGAACT +
Preference number: 4 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSSPRCG*RQAART
Trigger: AGTTCTTGCTGCCTGACGTCATCCGCATCTGGGACT...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAATCTGGCAGACATCTGTaGTGGGGTAGTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAESGRHL*WGSPAA
Trigger: TGCTGCAGGACTACCCCATCACAGATGTCTGCCAGA...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGAACAGACATCTGTGGGTaGGACAGACGGCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGTDICG*DRRQDS
Trigger: TGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGT...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGTGGTCCCTGTGCTCTTaGCCTTCATCTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRWSLCS*PSSQGQ
Trigger: TTGACCTTGAGATGAAGGTCAAGAGCACAGGGACCA...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCACACACGGAGAAGATaGCTGGGGACTTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHHTRRR*LGTWAH
Trigger: GTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTG...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAGGTCAGAGAAGGCCCTaGACCTCCCTCAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKGQRRP*TSLSPQ
Trigger: CTGCGGGCTGAGGGAGGTGCAGGGCCTTCTCTGACC...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCCTGGGGCCTGACTCCTaGCAGCCAGTCTGGAGGACG +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRILGPDS*QPVWRT
Trigger: CGTCCTCCAGACTGGCTGGCAGGAGTCAGGCCCCAG...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGGTCTCCCAAATACTGTaGTCTGGGAGAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGVSQIL*SGRGDR
Trigger: CCTGTCTCCTCTCCCAGAGCACAGTATTTGGGAGAC...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCATGGACACACCCATGTTaGCCTTGGCAATGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSWTHPC*PWQCQA
Trigger: AGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCA...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCGGCAAGGGTAGTCAGTaGCCCTCTGGAAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGGKGSQ*PSGRRK
Trigger: TTTCCTTCTTCCAGAGGGCCACTGACTACCCTTGCC...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGGCTTTCTGCAGGATCTaGCAGACATCTGTGATGGGG +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGAFCRI*QTSVMG
Trigger: CCCCATCACAGATGTCTGCCAGATCCTGCAGAAAGC...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCACACGGAGAAGATGCCTaGGGACTTGGGCCCACATTC +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGAHGEDA*GLGPTF
Trigger: GAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTG...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACTTCCTTCTCCCTCCCTaGGCAGAAAGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHFLLPP*AESRGR
Trigger: CCTGCCCCTGCTTTCTGCCCAGGGAGGGAGAAGGAA...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGAATGGGTTCCGACCCTaGGCTCAGAATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWNGFRP*AQNQGP
Trigger: AGGACCTTGATTCTGAGCCCAGGGTCGGAACCCATT...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGAATGGGTTCCGACCCTaGGCTCAGAATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRNGFRP*AQNQGP
Trigger: AGGACCTTGATTCTGAGCCCAGGGTCGGAACCCATT...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGACTCTTCTGAAGCAATaGGTTCCGACCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLTLLKQ*VPTLGS
Trigger: TGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGT...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGCCCACTTGCCCTTTGTaGGACTCACTCAACCCAACC +
Preference number: 4 (lower is better)
Translates to: AWGLGPTFTPTDYRHLWVPTCPL*DSLNPT
Trigger: GGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGG...CACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACTCCTGCCAGCCAGTCTaGAGGACGAGGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHSCQPV*RTRVLT
Trigger: AGTGAGGACCCTCGTCCTCCAGACTGGCTGGCAGGA...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCTGCACTAAAGAGTCCTaGGCAGTGTCTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSACTKES*AVSAGS
Trigger: GGACCCAGCAGACACTGCCCAGGACTCTTTAGTGCA...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCCAGGCGGTGTCCTGCTaGGAGCTCAGCCTAACCAAG +
Preference number: 4 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDIQAVSC*ELSLTK
Trigger: CTTGGTTAGGCTGAGCTCCCAGCAGGACACCGCCTG...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCCTTTTCCAATGCAATTaGGGGCTCCTTCAGGACATC +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGLFQCN*GLLQDI
Trigger: GATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAAG...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCGGAAGGCAAAGAACTaGGGCTTGATGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWRKAKN*GLMFCS
Trigger: AGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCG...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCGCCAAGCACCTCCCCTaGGTGGAGCCCAGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIAKHLP*VEPRRR
Trigger: TCTTCTCCTGGGCTCCACTCAGGGGAGGTGCTTGGC...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCACAGACATCTGTGGGTaGGACAGACGGCAGGACTCA +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGTDICG*DRRQDS
Trigger: TGAGTCCTGCCGTCTGTCTCACCCACAGATGTCTGT...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCTGGAGAGAGGAATCATaGAGCAAGACACAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGWREES*SKTQSH
Trigger: GTGGGACTGTGTCTTGCTTCATGATTCCTCTCTCCA...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCACTAAAGCAAACGTTCTaGCCCTCTGGAGTGAGACCC +
Preference number: 4 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSLKQTF*PSGVRP
Trigger: GGGTCTCACTCCAGAGGGTCAGAACGTTTGCTTTAG...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCGACATCCTGGAAATCTaGAATTCGGCTCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGDILEI*NSALVQ
Trigger: CTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTC...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGAGCTCCTTGGCTTTCTaGAGGATCTGGCAGACATCT +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRSSLAF*RIWQTS
Trigger: AGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCT...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGTTGGCAATGCCAGGCTaGATGATCATTTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLLAMPG*MIISLR
Trigger: CCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAA...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGAAAGTCACATCCTCCCTaGACACACCCATGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGKSHPP*THPCWP
Trigger: AGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTT...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGTTGGGGTTGAGTGGATaGTCCTCAAAAGTCACATCC +
Preference number: 4 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRLGLSG*SSKVTS
Trigger: GGATGTGACTTTTGAGGACCATCCACTCAACCCCAA...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGCCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGT +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQPVGMA*VSGRSC
Trigger: ACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGG...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCAGCGGGGAGAGGAGGTaGCTCAGGATAAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRISGERR*LRIRHP
Trigger: GGGGTGCCTTATCCTGAGCCACCTCCTCTCCCCGCT...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCTGCACTAAAGAGTCCTaGGCAGTGTCTGCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGCTKES*AVSAGS
Trigger: GGACCCAGCAGACACTGCCCAGGACTCTTTAGTGCA...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 72 bp GTCCTCACTATGGCACCCGGCTTCCGGACGCAAACCTaGTACAAGGAGGGAGGTGACTTGGTGAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: VLTMAPGFRTQT*YKEGGDLVRTG
Trigger: CCCAGTTCTCACCAAGTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAAGCCGGGTGCCATAGTGAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGCCGCATATTCACAGTaGAGTCCCCTTCCAGCAACT +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLAAYSQ*SPLPAT
Trigger: AGTTGCTGGAAGGGGACTTCACTGTGAATATGCGGC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTGGTCCCTGTGCTCTTaGCCTTCATCTCAAGGTCAA +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVWSLCS*PSSQGQ
Trigger: TTGACCTTGAGATGAAGGTCAAGAGCACAGGGACCA...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTGGAGTGAGACCCGCTaGATTCATACAGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRWSETR*IHTAQS
Trigger: AGATTGAGCTGTATGAATTCAGCGGGTCTCACTCCA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCATCTGACCCTCTGGAGTaGGACCCGCTGAATTCATAC +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGASDPLE*DPLNSY
Trigger: GTATGAATTCAGCGGGTCTCACTCCAGAGGGTCAGA...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGTCTGACCCTCTGGAGTaGGACCCGCTGAATTCATAC +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLSDPLE*DPLNSY
Trigger: GTATGAATTCAGCGGGTCTCACTCCAGAGGGTCAGA...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCACTAAAGCAAACGTTCTaGCCCTCTGGAGTGAGACCC +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGALKQTF*PSGVRP
Trigger: GGGTCTCACTCCAGAGGGTCAGAACGTTTGCTTTAG...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTGGGACCTGGATCTCCATCTTGTAGGTaGTGCCACACTGCGAGTCAT +
Preference number: 4 (lower is better)
Translates to: PHLPFVGLTQPNPGLGPGSPSCR*CHTASH
Trigger: ATGACTCGCAGTGTGGCATCACCTACAAGATGGAGA...TCCAGGTCCCAACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR GCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTACATCTTTGTCGATCTaGAGCAGCACCTCGTTGTCC +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVTSLSI*SSTSLS
Trigger: GGACAACGAGGTGCTGCTGCAGATCGACAAAGATGT...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCTGGGAGTGGCCAGCTaGCCCTGCTCAGGGTACACC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQELGVAS*PCSGYT
Trigger: GGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGTCTCCCAAATACTGTaGTCTGGGAGAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLVSQIL*SGRGDR
Trigger: CCTGTCTCCTCTCCCAGAGCACAGTATTTGGGAGAC...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCCCCTTCCTATACCCATaGCTCATCCCCAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGPFLYP*LIPRAL
Trigger: AAGTGCTCTGGGGATGAGGCATGGGTATAGGAAGGG...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACGAAGCATCATGCCTCTaGCTCATCCTGGAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHEASCL*LILEVL
Trigger: CAGGACCTCCAGGATGAGGCAGAGGCATGATGCTTC...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTGCAGACAAGAGTGAGTaGACTAAAGAGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVADKSE*TKESWA
Trigger: TGCCCAGGACTCTTTAGTGCACTCACTCTTGTCTGC...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCCACTTGACCCAACTCTaGCAGCGAGGCAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAHLTQL*QRGKVM
Trigger: CATTACTTTGCCTCGCTGGCAGAGTTGGGTCAAGTG...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTTGGCAATGCCAGGCTaGATGATCATTTCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVLAMPG*MIISLR
Trigger: CCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAA...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCAAGTCACATCCTCCCTaGACACACCCATGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGKSHPP*THPCWP
Trigger: AGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTT...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGTTGGGGTTGAGTGGATaGTCCTCAAAAGTCACATCC +
Preference number: 4 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRLGLSG*SSKVTS
Trigger: GGATGTGACTTTTGAGGACCATCCACTCAACCCCAA...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTAGGGTTGGGGTTGAGTaGATGGTCCTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVRVGVE*MVLKSH
Trigger: GTGACTTTTGAGGACCATCCACTCAACCCCAACCCT...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTAGGGTTGGGGTTGAGTaGATGGTCCTCAAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVRVGVE*MVLKSH
Trigger: GTGACTTTTGAGGACCATCCACTCAACCCCAACCCT...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCACCAGTGGGCATGGCCTaGGTCTCGGGCCGATCCTGT +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPPVGMA*VSGRSC
Trigger: ACAGGATCGGCCCGAGACCCAGGCCATGCCCACTGG...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCCGGTTTCTGGCCCATTaGCCAAGCACCTCCCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIRFLAH*PSTSPE
Trigger: CTCAGGGGAGGTGCTTGGCCAATGGGCCAGAAACCG...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTGCCAGGGCTGGGGGATaGGAACAGGAGGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFARAGG*EQEAKA
Trigger: GGCCTTTGCCTCCTGTTCCCATCCCCCAGCCCTGGC...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCATCAGCCCGCAGCGGGTaGAGGGGTACACAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPSARSG*RGTQRH
Trigger: GTGCCTCTGTGTACCCCTCCACCCGCTGCGGGCTGA...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCGAGGGTCCTCACTATaGCACCCGGCTTCCGGACGC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQERGSSL*HPASGR
Trigger: GCGTCCGGAAGCCGGGTGCCATAGTGAGGACCCTCG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCCCAAATACTGTGCTCTaGGAGAGGAGACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGPNTVL*ERRQAG
Trigger: ACCTGCCTGTCTCCTCTCCCAGAGCACAGTATTTGG...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCTGGGCAGTGTCTGCTaGGTCCCAGGCAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQELGSVC*VPGSGP
Trigger: TGGGCCACTGCCTGGGACCCAGCAGACACTGCCCAG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
3UTR CAA 72 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTaGGGCCCACATTCACACCGACCGACTACAGACATC +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGD*GPHSHRPTTDI
Trigger: GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACTGTCAGGGTTGGGGTTaGGTGGATGGTCCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHCQGWG*VDGPQK
Trigger: CTTTTGAGGACCATCCACTCAACCCCAACCCTGACA...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCTTCCGGGCCACCGTCTaGGATTTCAGTGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDIFRATV*DFSVVC
Trigger: ACAGACAACACTGAAATCTCAGACGGTGGCCCGGAA...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGCGGAAGGCAAAGAACTaGGGCTTGATGTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLRKAKN*GLMFCS
Trigger: AGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCG...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGCGTCATCAACAGCACTaGCTCAAGGAACAAAACAGA +
Preference number: 4 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGRHQQH*LKEQNR
Trigger: TCTGTTTTGTTCCTTGAGTCAGTGCTGTTGATGACG...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGAGGAGACAGGCAGGTaGGGAAATCCAGGCGGCATC +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQEETGR*GNPGGI
Trigger: GATGCCGCCTGGATTTCCGCACCTGCCTGTCTCCTC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCGCAGACAAGAGTGAGTaGACTAAAGAGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGADKSE*TKESWA
Trigger: TGCCCAGGACTCTTTAGTGCACTCACTCTTGTCTGC...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGCCACGATTTCATTCATaGCTTGCACATAAGCGATGC +
Preference number: 4 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLPRFHS*LAHKRC
Trigger: GCATCGCTTATGTGCAAGGCATGAATGAAATCGTGG...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCAGAAGAAGGAAATGTCTaGGCACAACCTCCGGACATC +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGAEEGNV*AQPPDI
Trigger: GATGTCCGGAGGTTGTGCCCAGACATTTCCTTCTTC...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAAGCGGGGAGAGGAGGTaGCTCAGGATAAGGCACCCC +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPSGERR*LRIRHP
Trigger: GGGGTGCCTTATCCTGAGCCACCTCCTCTCCCCGCT...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCACTCTTCTGAAGCAATaGGTTCCGACCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDITLLKQ*VPTLGS
Trigger: TGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGT...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGTCCTGCCAGCCAGTCTaGAGGACGAGGGTCCTCACT +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQSCQPV*RTRVLT
Trigger: AGTGAGGACCCTCGTCCTCCAGACTGGCTGGCAGGA...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGCCCAAAGCCGGGCTTaGAAGGGCAGCGAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEAQSRA*KGSEKS
Trigger: GGACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCACTATTGGGGTCGGTaGCAAAGGTGTAGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHHYWGR*QRCSRG
Trigger: CCCTCTACTACACCTTTGCCACCGACCCCAATAGTG...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR TCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACTGGAGAGAGGAATCATaGAGCAAGACACAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHWREES*SKTQSH
Trigger: GTGGGACTGTGTCTTGCTTCATGATTCCTCTCTCCA...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTAGGGAGGTGACTTGGTaGGAACTGGGAGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFREVTW*ELGVAS
Trigger: GCTGGCCACTCCCAGTTCTCACCAAGTCACCTCCCT...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTCAAGGAGAGGGCACTTaGCCCAACTCTGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFQGEGT*PNSASE
Trigger: CTCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTG...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGTGGAGTGAGACCCGCTaGATTCATACAGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLWSETR*IHTAQS
Trigger: AGATTGAGCTGTATGAATTCAGCGGGTCTCACTCCA...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCGACATCCTGGAAATCTaGAATTCGGCTCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGDILEI*NSALVQ
Trigger: CTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTC...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCATACAGCTCCCTCTaGTTGGCCAGGATGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQAYSSL*LARMEV
Trigger: GACCTCCATCCTGGCCAAGCAGAGGGAGCTGTATGC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGTGGAGCAGCCGAAGTaGCCCGCTCAGAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEVEQPK*PAQKRF
Trigger: AAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCAC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGGCAGCGAGAAGTCCTaGCCACCAGACTCGGAAAGC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEGSEKS*PPDSES
Trigger: GCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCACATCCCCAGAGCACTTaGCAATGTGCAATACATAGC +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGAHPQST*QCAIHS
Trigger: GCTATGTATTGCACATTGGCAAGTGCTCTGGGGATG...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCCCTCCCTTGGGCATCTaGTTGAGAATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRIPPLGI*LRIWGR
Trigger: CCTTCCCCAGATTCTCAAGCAGATGCCCAAGGGAGG...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCGAAGAAGGAAATGTCTaGGCACAACCTCCGGACATC +
Preference number: 4 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDIEEGNV*AQPPDI
Trigger: GATGTCCGGAGGTTGTGCCCAGACATTTCCTTCTTC...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGAGATGCCTGGGGACTTaGGCCCACATTCACACCGAC +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQRCLGT*AHIHTD
Trigger: GTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCT...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTTTCCTTCTCCCTCCCTaGGCAGAAAGCAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFFLLPP*AESRGR
Trigger: CCTGCCCCTGCTTTCTGCCCAGGGAGGGAGAAGGAA...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTTGGCCCTCCTGGAACTaGCAGGACCCAGGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFWPSWN*QDPGPL
Trigger: TAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCA...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTATCTGCTTGAGAATCTaGGGAAGGGACATTATCAGG +
Preference number: 4 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVICLRI*GRDIIR
Trigger: CCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGAT...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTATCTGCTTGAGAATCTaGGGAAGGGACATTATCAGG +
Preference number: 4 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVICLRI*GRDIIR
Trigger: CCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGAT...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCTTTCCACTCACTATTaGGGTCGGTGGCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHLSTHY*GRWQRC
Trigger: ACACCTTTGCCACCGACCCCAATAGTGAGTGGAAAG...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR TCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTGCACCTCGTTGTCCTTaGAGTACGTGTTCCACCGGC +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFAPRCP*STCSTG
Trigger: GCCGGTGGAACACGTACTTCAAGGACAACGAGGTGC...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTAGTGGCCCAAGCTTATaGAGGGGTTGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFSGPSL*RGWRRG
Trigger: GCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACT...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAAGTGGCCCAAGCTTATaGAGGGGTTGGAGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPSGPSL*RGWRRG
Trigger: GCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACT...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp TGGGTGAGACAGACGGCAGGACTCAGCTTTCAGTGTCGCCTTCCCTGTGGAGCACGTCATCAACAGCACTaGCTCAAGGAACAAAACAGA +
Preference number: 4 (lower is better)
Translates to: WVRQTAGLSFQCRLPCGARHQQH*LKEQNR
Trigger: TCTGTTTTGTTCCTTGAGTCAGTGCTGTTGATGACG...TGCTCCACAGGGAAGGCGACACTGAAAGCTGAGTCCTGCCGTCTGTCTCACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGTCCCCTTCCAGCAACTaGTCCCGGATCAGCATGAGC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQESPSSN*SRISMS
Trigger: GCTCATGCTGATCCGGGAGCAGTTGCTGGAAGGGGA...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCGCTCAGCCAGGACCTaGTCGAAAACCAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQERSART*SKTRQF
Trigger: GAACTGCCTGGTTTTCGAGCAGGTCCTGGCTGAGCG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGAGCAGGAAGCATCATaGCTCTGCCTCATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQEQEAS*LCLILE
Trigger: CTCCAGGATGAGGCAGAGGCATGATGCTTCCTGCTC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAGACTACAGACATCTGTaGGTGAGACAGACGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKDYRHL*VRQTAG
Trigger: TCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTC...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGGGCCTCACAGCCATTaGGCAGCACCTCATACTCAT +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQGPHSH*AAPHTH
Trigger: ATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGGCTTCCCCTCAGGCTaGGTTCCTACAGGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQGFPSG*VPTGFY
Trigger: ATAGAAACCTGTAGGAACCCAGCCTGAGGGGAAGCC...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCACCCACTTGCCCTTTGTaGGACTCACTCAACCCAACC +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPPTCPL*DSLNPT
Trigger: GGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGG...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCCCTTATCTTTCAAGGTaGAGTAAACCTTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAPYLSR*SKPSPS
Trigger: AGATGGAGAAGGTTTACTCCACCTTGAAAGATAAGG...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR GCA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGAGCTCCTTGGCTTTCTaGAGGATCTGGCAGACATCT +
Preference number: 4 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQSSLAF*RIWQTS
Trigger: AGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCT...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTCCCTTCCTATACCCATaGCTCATCCCCAGAGCACTT +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFPFLYP*LIPRAL
Trigger: AAGTGCTCTGGGGATGAGGCATGGGTATAGGAAGGG...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGCAGAAAAAGGTGTCTaGCTCGGCGTGCTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPAEKGV*LGVLFP
Trigger: TGGAAAGAGCACGCCGAGGCAGACACCTTTTTCTGC...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGGCAAGGGTAGTCAGTaGCCCTCTGGAAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEGKGSQ*PSGRRK
Trigger: TTTCCTTCTTCCAGAGGGCCACTGACTACCCTTGCC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGGACTACAGACATCTGTaGGTGAGACAGACGGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEDYRHL*VRQTAG
Trigger: TCCTGCCGTCTGTCTCACCCACAGATGTCTGTAGTC...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCCAAATACTGTGCTCTaGGAGAGGAGACAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEPNTVL*ERRQAG
Trigger: ACCTGCCTGTCTCCTCTCCCAGAGCACAGTATTTGG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR TCA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTCAATGCCAGGCTGGATaGTCATTTCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFQCQAG*SFPSGT
Trigger: AGTTCCTGAGGGAAATGATCATCCAGCCTGGCATTG...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCACTTGACCCAACTCTaGCAGCGAGGCAAAGTAATG +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEHLTQL*QRGKVM
Trigger: CATTACTTTGCCTCGCTGGCAGAGTTGGGTCAAGTG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR GCA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCATCCCCAGAGCACTTaGCAATGTGCAATACATAGC +
Preference number: 4 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQEHPQST*QCAIHS
Trigger: GCTATGTATTGCACATTGGCAAGTGCTCTGGGGATG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCCCCTTGGGCATCTGCTaGAGAATCTGGGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: GELGVAAEGARHSVSPVGPLGIC*RIWGRD
Trigger: GTCCCTTCCCCAGATTCTCAAGCAGATGCCCAAGGG...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGTTCCTCGGGCCCCACTaGCCCTTTGTGGGACTCACT +
Preference number: 5 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALFLGPH*PFVGLT
Trigger: AGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAA...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGTGCCGCCGGGCTACTTaGAGTCTTGGAGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRCRRAT*SLGAPW
Trigger: CCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCA...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGGCGGAACATGGGCCTCTaGCCGCCGGGCTACTTTGAG +
Preference number: 5 (lower is better)
Translates to: FPVEQPKCPAQKRFLAHWRNMGL*PPGYFE
Trigger: CTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCG...CCAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGTTCCTCGGGCCCCACTaGCCCTTTGTGGGACTCACT +
Preference number: 5 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRFLGPH*PFVGLT
Trigger: AGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAA...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGGCCCAAAGCCGGGCTaGGAAGGGCAGCGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAGPKPG*EGQREV
Trigger: GACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGTCAAGGAGAGGGCACTaGACCCAACTCTGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALSRRGH*TQLCQR
Trigger: TCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTGA...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCGAGTCATCCAGGCTCTaGATAAAGTTGTCCCGGATC +
Preference number: 5 (lower is better)
Translates to: GELGVAAEGARHSVSPVGESSRL*IKLSRI
Trigger: GATCCGGGACAACTTTATCAAGAGCCTGGATGACTC...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS GCA 90 bp CCAGGGCACAGGGTCGGGAGGCTTCTCTCCGGAACATGGGCCTCTTaGCGCCGGGCTACTTTGAGTCTTGGAGCTCCTTGGCTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: PGHRVGRLLSGTWAS*RRATLSLGAPWLSA
Trigger: TGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCCCGACCCTGTGCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRTPMLA*AMPGWM
Trigger: CATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGT...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGTGCCGCCGGGCTACTTaGAGTCTTGGAGCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRCRRAT*SLGAPW
Trigger: CCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCA...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTTCTGGCCCATTGAGGCAAAGGCCAAGCTaGACCTCCAGGGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LPCGAAEVPRSEAVSGPLRQRPS*TSRGLA
Trigger: AGCAAGGCCCCTGGAGGTCAAGCTTGGCCTTTGCCT...CAATGGGCCAGAAACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GCTTGGAAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGCAAAGGCCAAGCTaGACCTCCAGGGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: AWKGSEKSCPPDSESFGGRQRPS*TSRGLA
Trigger: AGCAAGGCCCCTGGAGGTCAAGCTTGGCCTTTGCCT...GCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTTCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGGGCCCCACTTGCCCTTaGTGGGACTCACTCAACCCA +
Preference number: 5 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRGPTCP*WDSLNP
Trigger: TGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCC...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGGGCCCCACTTGCCCTTaGTGGGACTCACTCAACCCA +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRGPTCP*WDSLNP
Trigger: TGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCC...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGAACCTCCGGACATCTTaGTCGATCTGCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRNLRTS*SICSST
Trigger: GGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTT...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGAAGATGCCTGGGGACTaGGGCCCACATTCACACCGA +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRKMPGD*GPHSHR
Trigger: TCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTT...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGAGGACTCCCTCCCAGTaGGGAGGACCTAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLRTPSQ*GGPRSQ
Trigger: CTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCCT...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGCTGAACCACCAGCTGACAAGTCCTGGAGAGAGGGTGGCCCAGGTGAGCAGGTTCCGGACGCAAACCTaGTACAAGGAGGGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: GLNHQLTSPGERVAQVSRFRTQT*YKEGGD
Trigger: GTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAA...CCTGCTCACCTGGGCCACCCTCTCTCCAGGACTTGTCAGCTGGTGGTTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAACTGGCAGGACCCAGGGCCTTTAAGCTCAGCTACCCCTGGCCCCAGAGAGGCTTCCGGACGCAAACCTaGTACAAGGAGGGAGGTGAC +
Preference number: 5 (lower is better)
Translates to: ELAGPRAFKLSYPWPQRGFRTQT*YKEGGD
Trigger: GTCACCTCCCTCCTTGTACAAGGTTTGCGTCCGGAA...GCCTCTCTGGGGCCAGGGGTAGCTGAGCTTAAAGGCCCTGGGTCCTGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGTCAAGGAGAGGGCACTaGACCCAACTCTGCCAGCGA +
Preference number: 5 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRSRRGH*TQLCQR
Trigger: TCGCTGGCAGAGTTGGGTCAAGTGCCCTCTCCTTGA...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGCCCTTGGGCATCTGCTaGAGAATCTGGGGAAGGGAC +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRPLGIC*RIWGRD
Trigger: GTCCCTTCCCCAGATTCTCAAGCAGATGCCCAAGGG...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GCTGGGTCCCAGGCAGTGGCCCAAGCTTATGAAGGGGTTGGAGAAGGGGCTGAAACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: AGSQAVAQAYEGVGEGAETPMLA*AMPGWM
Trigger: CATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGT...TTCAGCCCCTTCTCCAACCCCTTCATAAGCTTGGGCCACTGCCTGGGACCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGAGCACCTCGTTGTCCTaGAAGTACGTGTTCCACCGG +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRSTSLS*KYVFHR
Trigger: CCGGTGGAACACGTACTTCAAGGACAACGAGGTGCT...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGAACCTCCGGACATCTTaGTCGATCTGCAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRNLRTS*SICSST
Trigger: GGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTT...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGGAGTCTTGGAGCTCCTaGGCTTTCTGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRESWSS*AFCRIW
Trigger: CCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTC...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGGAACATGGGCCTCTaGCCGCCGGGCTACTTTGAG +
Preference number: 5 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHRNMGL*PPGYFE
Trigger: CTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCG...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TTTCAGTGTCGCCTTCCCTGTGGAGCAGCCGAAGTGCCCCGCTCAGAAGCGGTTAAGGAGGGAGGTGACTaGGTGAGAACTGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: FQCRLPCGAAEVPRSEAVKEGGD*VRTGSG
Trigger: GCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTT...AACCGCTTCTGAGCGGGGCACTTCGGCTGCTCCACAGGGAAGGCGACACTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GGGGAGCTGGGCGTGGCGGCAGAAGGAGCACGGCACAGTGTGTCCCCAGTGGGCAAAATGAAGAGGATCTaGTCTCCAACTCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: GELGVAAEGARHSVSPVGKMKRI*SPTPFS
Trigger: GGAGAAAGGAGTTGGAGACAAGATCCTCTTCATTTT...GCCCACTGGGGACACACTGTGCCGTGCTCCTTCTGCCGCCACGCCCAGCTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS TCA 90 bp GGAGGCTTCTCTCCGGAACATGGGCCTCTTGCCGCCGGGCTACTTTaGGTCTTGGAGCTCCTTGGCTTTCTGCAGGATCTGGCAGACATC +
Preference number: 5 (lower is better)
Translates to: GGFSPEHGPLAAGLL*VLELLGFLQDLADI
Trigger: GATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCCTGGACACACCCATGTaGGCCTTGGCAATGCCAGGC +
Preference number: 5 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDILDTPM*ALAMPG
Trigger: GCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAG...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCGAGTCTTGGAGCTCCTaGGCTTTCTGCAGGATCTGG +
Preference number: 5 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSAESWSS*AFCRIW
Trigger: CCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTC...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGCTGGTCCCTGTGCTCTaGACCTTCATCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGLVPVL*TFISRS
Trigger: TGACCTTGAGATGAAGGTCAAGAGCACAGGGACCAG...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TTCCCGAGCTCCAGCCCTCCTCAGTATCCTGGGCAAAGAGGGCAGAGTGCAGGGTCTGCAATTCGGCTCTaGTGCAGACTTGACATGGTG +
Preference number: 5 (lower is better)
Translates to: FPSSSPPQYPGQRGQSAGSAIRL*CRLDMV
Trigger: CACCATGTCAAGTCTGCACAAGAGCCGAATTGCAGA...CCCTGCACTCTGCCCTCTTTGCCCAGGATACTGAGGAGGGCTGGAGCTCGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGAGGAAGTCAAAGCGGTaGTCATCGGCGAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: SGEGTLSGQVLSAGGVLLRKSKR*SSAKRE
Trigger: CTCCCTCTTCGCCGATGACAACCGCTTTGACTTCCT...CAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAAGGACTCCCTCCCAGTaGGGAGGACCTAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKRTPSQ*GGPRSQ
Trigger: CTGGCTCCTAGGTCCTCCCAACTGGGAGGGAGTCCT...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CTTCCTCGGGCCCCACTTGCCCTTTGTGGGACTCACTCAACCCAACCCTGGGTTCTGGTCCCTGTGCTCTaGACCTTCATCTCAAGGTCA +
Preference number: 5 (lower is better)
Translates to: LPRAPLALCGTHSTQPWVLVPVL*TFISRS
Trigger: TGACCTTGAGATGAAGGTCAAGAGCACAGGGACCAG...AACCCAGGGTTGGGTTGAGTGAGTCCCACAAAGGGCAAGTGGGGCCCGAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACTGGGCCTCACAGCCATaGGGCAGCACCTCATACTCA +
Preference number: 5 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHWASQP*GSTSYS
Trigger: TGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCA...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CAA 90 bp AAGGGCAGCGAGAAGTCCTGCCCACCAGACTCGGAAAGCTTTGGGGGCAGGAGGATCTCGGCCATGAGGTaGGTGAAGCAGAAAAAGGTG +
Preference number: 5 (lower is better)
Translates to: KGSEKSCPPDSESFGGRRISAMR*VKQKKV
Trigger: CACCTTTTTCTGCTTCACCAACCTCATGGCCGAGAT...CCTCCTGCCCCCAAAGCTTTCCGAGTCTGGTGGGCAGGACTTCTCGCTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CCA 90 bp ACATCCTCCCTGGACACACCCATGTTGGCCTTGGCAATGCCAGGCTaGATGATCATTTCCCTCAGGAACTGGGCATACAGCTCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TSSLDTPMLALAMPG*MIISLRNWAYSSLC
Trigger: GCAGAGGGAGCTGTATGCCCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CCA 90 bp TCTCTCCGGAACATGGGCCTCTTGCCGCCGGGCTACTTTGAGTCTTaGAGCTCCTTGGCTTTCTGCAGGATCTGGCAGACATCTGTGATG +
Preference number: 5 (lower is better)
Translates to: SLRNMGLLPPGYFES*SSLAFCRIWQTSVM
Trigger: CATCACAGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACATTATCAGGGCAGGTCCTTTCTGCAGGCGGTGTCCTGCTGGGAGCTCAGCCTCTGCAATTCGGCTCTaGTGCAGACTTGACATGGTG +
Preference number: 5 (lower is better)
Translates to: DIIRAGPFCRRCPAGSSASAIRL*CRLDMV
Trigger: CACCATGTCAAGTCTGCACAAGAGCCGAATTGCAGA...GGCTGAGCTCCCAGCAGGACACCGCCTGCAGAAAGGACCTGCCCTGATAATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGCCCACATTCACACCGACCGACTACAGACATCTGTGGGTGAGACAGACGGCTGCAGCAGCACCTCGTaGTCCTTGAAGTACGTGTTC +
Preference number: 5 (lower is better)
Translates to: WAHIHTDRLQTSVGETDGCSSTS*SLKYVF
Trigger: GAACACGTACTTCAAGGACAACGAGGTGCTGCTGCA...GCCGTCTGTCTCACCCACAGATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGTCTGAGATTTCAGTGTaGTCTGTTCCACTCTCTTAC +
Preference number: 5 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALSEISV*SVPLSY
Trigger: GTAAGAGAGTGGAACAGACAACACTGAAATCTCAGA...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGGCACAGACATGGCCCTCCTGGAACTGGCAGGACCCAGGGCCTTTAAGCTCACTTGATGTTCTGCTCTaGATTTGTGACCCCACTCCG +
Preference number: 5 (lower is better)
Translates to: EAQTWPSWNWQDPGPLSSLDVLL*ICDPTP
Trigger: CGGAGTGGGGTCACAAATCAAGAGCAGAACATCAAG...TGAGCTTAAAGGCCCTGGGTCCTGCCAGTTCCAGGAGGGCCATGTCTGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223865.8
CDS-3UTR CAA 90 bp GAGAAGATGCCTGGGGACTTGGGCCCACATTCACACCGACCGACTACAGACATCAGGAAGTCAAAGCGGTaGTCATCGGCGAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: EKMPGDLGPHSHRPTTDIRKSKR*SSAKRE
Trigger: CTCCCTCTTCGCCGATGACAACCGCTTTGACTTCCT...GATGTCTGTAGTCGGTCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGCCCAAAGCCGGGCTaGGAAGGGCAGCGAGAAGTC +
Preference number: 5 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPGPKPG*EGQREV
Trigger: GACTTCTCGCTGCCCTTCCAAGCCCGGCTTTGGGCC...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAGAACTGGGAGTGGCCAGCTGCCCCTGCTCAGGGTACACCTGCTCCAGCCCTGAAAATGAAGAGGATCTaGTCTCCAACTCCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ENWEWPAAPAQGTPAPALKMKRI*SPTPFS
Trigger: GGAGAAAGGAGTTGGAGACAAGATCCTCTTCATTTT...CAGGGCTGGAGCAGGTGTACCCTGAGCAGGGGCAGCTGGCCACTCCCAGTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAAGCACCTCGTTGTCCTaGAAGTACGTGTTCCACCGG +
Preference number: 5 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKSTSLS*KYVFHR
Trigger: CCGGTGGAACACGTACTTCAAGGACAACGAGGTGCT...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGAAGATGCCTGGGGACTaGGGCCCACATTCACACCGA +
Preference number: 5 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQKMPGD*GPHSHR
Trigger: TCGGTGTGAATGTGGGCCCAAGTCCCCAGGCATCTT...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp TGGGTTCCTACAGGTTTCTATGTGTCCCGGGAGCCAGGGCACAGGGTCGGGAGGCTTACTCAGCAGCATTaGGTTTCCAAGATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: WVPTGFYVSREPGHRVGRLTQQH*VSKISV
Trigger: CACAGAAATCTTGGAAACCAAATGCTGCTGAGTAAG...CCTCCCGACCCTGTGCCCTGGCTCCCGGGACACATAGAAACCTGTAGGAACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS TCA 90 bp GGGGAGCTCATATTTGTGACCCCACTCCGGTTCCGGGCCACCGTCTaGGATTTCAGTGTTGTCTGTTCCACTCTCTTACGAAGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GELIFVTPLRFRATV*DFSVVCSTLLRRVS
Trigger: TGAAACCCTTCGTAAGAGAGTGGAACAGACAACACTGAAATCTCAGACGGTGGCCCGGAACCGGAGTGGGGTCACAAATATGAGCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS-3UTR CAA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAACTGTCAGGGTTGGGGTaGAGTGGATGGTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKLSGLG*SGWSSK
Trigger: TTTTGAGGACCATCCACTCAACCCCAACCCTGACAG...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GAAAGCAGGGGCAGGAGGCTCAAAGCTTCATCCTTACTCAGCAGCATTTGGTTTAAGGAGGGAGGTGACTaGGTGAGAACTGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: ESRGRRLKASSLLSSIWFKEGGD*VRTGSG
Trigger: GCCACTCCCAGTTCTCACCAAGTCACCTCCCTCCTT...AAACCAAATGCTGCTGAGTAAGGATGAAGCTTTGAGCCTCCTGCCCCTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCACTGTGGGGACCTCCCTaGGGCATCTGCTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPLWGPP*GICLRI
Trigger: GATTCTCAAGCAGATGCCCAAGGGAGGTCCCCACAG...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CACACACACACACACACGGAGAAGATGCCTGGGGACTTGGGCCCACATTCACACGATTTCATTCATGCCTaGCACATAAGCGATGCCAGG +
Preference number: 5 (lower is better)
Translates to: HTHTHTEKMPGDLGPHSHDFIHA*HISDAR
Trigger: CCTGGCATCGCTTATGTGCAAGGCATGAATGAAATC...GTGTGAATGTGGGCCCAAGTCCCCAGGCATCTTCTCCGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CAA 90 bp CACTCAATTCCAGTACAGAACTCAGAGCCCGCTCAGCCAGGACCTGCTCGAAAAAGGCTCTTGATAAAGTaGTCCCGGATCTCGGCCATG +
Preference number: 5 (lower is better)
Translates to: HSIPVQNSEPAQPGPARKRLLIK*SRISAM
Trigger: CATGGCCGAGATCCGGGACAACTTTATCAAGAGCCT...TTTTCGAGCAGGTCCTGGCTGAGCGGGCTCTGAGTTCTGTACTGGAATTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CAA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGCTGTCAGGGTTGGGGTaGAGTGGATGGTCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQLSGLG*SGWSSK
Trigger: TTTTGAGGACCATCCACTCAACCCCAACCCTGACAG...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CATCTGCTTGAGAATCTGGGGAAGGGACATTATCAGGGCAGGTCCTTTCTGCAGTGCAGCAGCACCTCGTaGTCCTTGAAGTACGTGTTC +
Preference number: 5 (lower is better)
Translates to: HLLENLGKGHYQGRSFLQCSSTS*SLKYVF
Trigger: GAACACGTACTTCAAGGACAACGAGGTGCTGCTGCA...CTGCAGAAAGGACCTGCCCTGATAATGTCCCTTCCCCAGATTCTCAAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGTCTTTCCACTCACTATaGGGGTCGGTGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQESFHSL*GSVAKV
Trigger: CACCTTTGCCACCGACCCCAATAGTGAGTGGAAAGA...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CCA 90 bp TCCCGCAGCTTTTCCAATGCAATTGAGGGCTCCTTCAGGACATCCTaGAAATCTGCAATTCGGCTCTTGTGCAGACTTGACATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SRSFSNAIEGSFRTS*KSAIRLLCRLDMVL
Trigger: CAACACCATGTCAAGTCTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAAGCTGCGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS-3UTR CAA 90 bp CGAGGGAATGACAACTCTTCTGAAGCAATGGGTTCCGACCCTGGGCTCAGAATCTCTGAGATTTCAGTGTaGTCTGTTCCACTCTCTTAC +
Preference number: 5 (lower is better)
Translates to: RGNDNSSEAMGSDPGLRISEISV*SVPLSY
Trigger: GTAAGAGAGTGGAACAGACAACACTGAAATCTCAGA...GATTCTGAGCCCAGGGTCGGAACCCATTGCTTCAGAAGAGTTGTCATTCCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS-3UTR CAA 90 bp GACCCAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGATGGCACAGAGTTCTaGTGTGGGGAGCTCATATTT +
Preference number: 5 (lower is better)
Translates to: DPTLPARQSNGDSSSVVPDGTEF*CGELIF
Trigger: AAATATGAGCTCCCCACACAAGAACTCTGTGCCATC...TGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS-3UTR CAA 90 bp CAACTCTGCCAGCGAGGCAAAGTAATGGTGATTCAAGTAGTGTGGTTCCAGGAGCTTGATGTTCTGCTCTaGCAGTTTCAGGTAGAGCTC +
Preference number: 5 (lower is better)
Translates to: QLCQRGKVMVIQVVWFQELDVLL*QFQVEL
Trigger: GAGCTCTACCTGAAACTGCAAGAGCAGAACATCAAG...CTCCTGGAACCACACTACTTGAATCACCATTACTTTGCCTCGCTGGCAGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CAA 90 bp GCCAGGGCACAGGGTCGGGAGGCTTCTCTCCGGAACATGGGCCTCTaGCCGCCGGGCTACTTTGAGTCTTGGAGCTCCTTGGCTTTCTGC +
Preference number: 6 (lower is better)
Translates to: ARAQGREASLRNMGL*PPGYFESWSSLAFC
Trigger: GCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCCCGACCCTGTGCCCTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS GCA 72 bp AGGGTCGGGAGGCTTCTCTCCGGAACATGGGCCTCTTaGCGCCGGGCTACTTTGAGTCTTGGAGCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RVGRLLSGTWAS*RRATLSLGAPW
Trigger: CCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCCCGACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 72 bp CAGGGTCGGGAGGCTTCTCTCCGGAACATGGGCCTCTaGCCGCCGGGCTACTTTGAGTCTTGGAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: QGREASLRNMGL*PPGYFESWSSL
Trigger: CAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCCCGACCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 90 bp AGCATGAGCATGGCGCAGCAGACGAGGAGGAGGAAGTCAAAGCGGTaGTCATCGGCGAAGAGGGAGTCCCAGATGCGGATGACGTCAGGC +
Preference number: 6 (lower is better)
Translates to: SMSMAQQTRRRKSKR*SSAKRESQMRMTSG
Trigger: GCCTGACGTCATCCGCATCTGGGACTCCCTCTTCGCCGATGACAACCGCTTTGACTTCCTCCTCCTCGTCTGCTGCGCCATGCTCATGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS TCA 72 bp GGTTGTCATCGGCGAAGAGGGAGTCCCAGATGCGGATaGCGTCAGGCAGCAAGAACTCCTGGGACAGCAGCA +
Preference number: 6 (lower is better)
Translates to: GCHRRRGSPRCG*RQAARTPGTAA
Trigger: TGCTGCTGTCCCAGGAGTTCTTGCTGCCTGACGTCATCCGCATCTGGGACTCCCTCTTCGCCGATGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CCA 72 bp AGGTGTCTGCCTCGGCGTGCTCTTTCCACTCACTATTaGGGTCGGTGGCAAAGGTGTAGTAGAGGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: RCLPRRALSTHY*GRWQRCSRGAP
Trigger: TGGGGCCCCTCTACTACACCTTTGCCACCGACCCCAATAGTGAGTGGAAAGAGCACGCCGAGGCAGACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CAA 72 bp ATGGCGCAGCAGACGAGGAGGAGGAAGTCAAAGCGGTaGTCATCGGCGAAGAGGGAGTCCCAGATGCGGATG +
Preference number: 6 (lower is better)
Translates to: MAQQTRRRKSKR*SSAKRESQMRM
Trigger: CATCCGCATCTGGGACTCCCTCTTCGCCGATGACAACCGCTTTGACTTCCTCCTCCTCGTCTGCTGCGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 90 bp GGGAGGCTTCTCTCCGGAACATGGGCCTCTTGCCGCCGGGCTACTTaGAGTCTTGGAGCTCCTTGGCTTTCTGCAGGATCTGGCAGACAT +
Preference number: 6 (lower is better)
Translates to: GRLLSGTWASCRRAT*SLGAPWLSAGSGRH
Trigger: ATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAGAAGCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 90 bp GGGCACAACCTCCGGACATCTTTGTCGATCTGCAGCAGCACCTCGTaGTCCTTGAAGTACGTGTTCCACCGGCTGTCAGGGTTGGGGTTG +
Preference number: 6 (lower is better)
Translates to: GHNLRTSLSICSSTS*SLKYVFHRLSGLGL
Trigger: CAACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS TCA 72 bp TCTCCGGAACATGGGCCTCTTGCCGCCGGGCTACTTTaGGTCTTGGAGCTCCTTGGCTTTCTGCAGGATCTG +
Preference number: 6 (lower is better)
Translates to: SPEHGPLAAGLL*VLELLGFLQDL
Trigger: CAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS GCA 72 bp AGCCGCATATTCACAGTGAAGTCCCCTTCCAGCAACTaGTCCCGGATCAGCATGAGCATGGCGCAGCAGACG +
Preference number: 6 (lower is better)
Translates to: SRIFTVKSPSSN*SRISMSMAQQT
Trigger: CGTCTGCTGCGCCATGCTCATGCTGATCCGGGAGCAGTTGCTGGAAGGGGACTTCACTGTGAATATGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS GCA 72 bp TCCAGCAGAGGCACCGCAGTCCGCCCTCACAGGGGATaGCTTCTCATCCTTGATATTCCTTCCTCAGGAGCA +
Preference number: 6 (lower is better)
Translates to: SSRGTAVRPHRG*LLILDIPSSGA
Trigger: TGCTCCTGAGGAAGGAATATCAAGGATGAGAAGGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466056.1
CDS CCA 72 bp TCCGCTCCACCACCTCCCAGTGGGCCTCACAGCCATTaGGCAGCACCTCATACTCATTTAGGGATGATGGCA +
Preference number: 6 (lower is better)
Translates to: SAPPPPSGPHSH*AAPHTHLGMMA
Trigger: TGCCATCATCCCTAAATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGAGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS CAA 72 bp CTCTCCGGAACATGGGCCTCTTGCCGCCGGGCTACTTaGAGTCTTGGAGCTCCTTGGCTTTCTGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: LSGTWASCRRAT*SLGAPWLSAGS
Trigger: AGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAGGCCCATGTTCCGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 72 bp ATCCGCTCCACCACCTCCCAGTGGGCCTCACAGCCATaGGGCAGCACCTCATACTCATTTAGGGATGATGGC +
Preference number: 6 (lower is better)
Translates to: IRSTTSQWASQP*GSTSYSFRDDG
Trigger: GCCATCATCCCTAAATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGAGCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS CAA 90 bp GCAGAGGCACCGCAGTCCGCCCTCACAGGGGATGCCTTCTCATCCTaGATATTCCTTCCTCAGGAGCAGCCTTTACCACCACCATGTCAT +
Preference number: 6 (lower is better)
Translates to: AEAPQSALTGDAFSS*IFLPQEQPLPPPCH
Trigger: ATGACATGGTGGTGGTAAAGGCTGCTCCTGAGGAAGGAATATCAAGGATGAGAAGGCATCCCCTGTGAGGGCGGACTGCGGTGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466056.1
CDS CAA 72 bp CTCCGGACATCTTTGTCGATCTGCAGCAGCACCTCGTaGTCCTTGAAGTACGTGTTCCACCGGCTGTCAGGG +
Preference number: 6 (lower is better)
Translates to: LRTSLSICSSTS*SLKYVFHRLSG
Trigger: CCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp CCGCAGTCCGCCCTCACAGGGGATGCCTTCTCATCCTaGATATTCCTTCCTCAGGAGCAGCCTTTACCACCA +
Preference number: 6 (lower is better)
Translates to: PQSALTGDAFSS*IFLPQEQPLPP
Trigger: TGGTGGTAAAGGCTGCTCCTGAGGAAGGAATATCAAGGATGAGAAGGCATCCCCTGTGAGGGCGGACTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466056.1
CDS CAA 90 bp AACCTCCGGACATCTTTGTCGATCTGCAGCAGCACCTCGTTGTCCTaGAAGTACGTGTTCCACCGGCTGTCAGGGTTGGGGTTGAGTGGA +
Preference number: 6 (lower is better)
Translates to: NLRTSLSICSSTSLS*KYVFHRLSGLGLSG
Trigger: TCCACTCAACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 90 bp ATGAACAGGATCCGCTCCACCACCTCCCAGTGGGCCTCACAGCCATaGGGCAGCACCTCATACTCATTTAGGGATGATGGCACAGAGTTC +
Preference number: 6 (lower is better)
Translates to: MNRIRSTTSQWASQP*GSTSYSFRDDGTEF
Trigger: GAACTCTGTGCCATCATCCCTAAATGAGTATGAGGTGCTGCCCAATGGCTGTGAGGCCCACTGGGAGGTGGTGGAGCGGATCCTGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS TCA 72 bp CATCTTTGTCGATCTGCAGCAGCACCTCGTTGTCCTTaGAGTACGTGTTCCACCGGCTGTCAGGGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: HLCRSAAAPRCP*STCSTGCQGWG
Trigger: ACCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS TCA 72 bp GCTCCTTGGCTTTCTGCAGGATCTGGCAGACATCTGTaGTGGGGTAGTCCTGCAGCAGCCGCATATTCACAG +
Preference number: 6 (lower is better)
Translates to: APWLSAGSGRHL*WGSPAAAAYSQ
Trigger: CTGTGAATATGCGGCTGCTGCAGGACTACCCCATCACAGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS GCA 72 bp CTCGGCCATGAGGTTGGTGAAGCAGAAAAAGGTGTCTaGCTCGGCGTGCTCTTTCCACTCACTATTGGGGTC +
Preference number: 6 (lower is better)
Translates to: LGHEVGEAEKGV*LGVLFPLTIGV
Trigger: GACCCCAATAGTGAGTGGAAAGAGCACGCCGAGGCAGACACCTTTTTCTGCTTCACCAACCTCATGGCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CCA 72 bp CTGGACACACCCATGTTGGCCTTGGCAATGCCAGGCTaGATGATCATTTCCCTCAGGAACTGGGCATACAGC +
Preference number: 6 (lower is better)
Translates to: LDTPMLALAMPG*MIISLRNWAYS
Trigger: GCTGTATGCCCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp ACATCTTTGTCGATCTGCAGCAGCACCTCGTTGTCCTaGAAGTACGTGTTCCACCGGCTGTCAGGGTTGGGG +
Preference number: 6 (lower is better)
Translates to: TSLSICSSTSLS*KYVFHRLSGLG
Trigger: CCCCAACCCTGACAGCCGGTGGAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp CTCTTGCCGCCGGGCTACTTTGAGTCTTGGAGCTCCTaGGCTTTCTGCAGGATCTGGCAGACATCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LLPPGYFESWSS*AFCRIWQTSVM
Trigger: CATCACAGATGTCTGCCAGATCCTGCAGAAAGCCAAGGAGCTCCAAGACTCAAAGTAGCCCGGCGGCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223865.8
ENST00000372648.10
CDS CAA 90 bp TGGTCCTCAAAAGTCACATCCTCCCTGGACACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATGATCATTTCCCTCAGGAACTGGGCA +
Preference number: 6 (lower is better)
Translates to: WSSKVTSSLDTPMLA*AMPGWMIISLRNWA
Trigger: TGCCCAGTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTTTTGAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp AAAGTCACATCCTCCCTGGACACACCCATGTTGGCCTaGGCAATGCCAGGCTGGATGATCATTTCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: KVTSSLDTPMLA*AMPGWMIISLR
Trigger: CCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp GGTGTAGTAGAGGGGCCCCACGATTTCATTCATGCCTaGCACATAAGCGATGCCAGGGTTGAGCTTGGCGTA +
Preference number: 6 (lower is better)
Translates to: GVVEGPHDFIHA*HISDARVELGV
Trigger: TACGCCAAGCTCAACCCTGGCATCGCTTATGTGCAAGGCATGAATGAAATCGTGGGGCCCCTCTACTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS CAA 72 bp CTCTTGATAAAGTTGTCCCGGATCTCGGCCATGAGGTaGGTGAAGCAGAAAAAGGTGTCTGCCTCGGCGTGC +
Preference number: 6 (lower is better)
Translates to: LLIKLSRISAMR*VKQKKVSASAC
Trigger: GCACGCCGAGGCAGACACCTTTTTCTGCTTCACCAACCTCATGGCCGAGATCCGGGACAACTTTATCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CAA 72 bp ATGCCACACTGCGAGTCATCCAGGCTCTTGATAAAGTaGTCCCGGATCTCGGCCATGAGGTTGGTGAAGCAG +
Preference number: 6 (lower is better)
Translates to: MPHCESSRLLIK*SRISAMRLVKQ
Trigger: CTGCTTCACCAACCTCATGGCCGAGATCCGGGACAACTTTATCAAGAGCCTGGATGACTCGCAGTGTGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS CAA 90 bp AGTGGATGGTCCTCAAAAGTCACATCCTCCCTGGACACACCCATGTaGGCCTTGGCAATGCCAGGCTGGATGATCATTTCCCTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: SGWSSKVTSSLDTPM*ALAMPGWMIISLRN
Trigger: GTTCCTGAGGGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTTTTGAGGACCATCCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 90 bp GGTGGCAAAGGTGTAGTAGAGGGGCCCCACGATTTCATTCATGCCTaGCACATAAGCGATGCCAGGGTTGAGCTTGGCGTAGATGAACAG +
Preference number: 6 (lower is better)
Translates to: GGKGVVEGPHDFIHA*HISDARVELGVDEQ
Trigger: CTGTTCATCTACGCCAAGCTCAACCCTGGCATCGCTTATGTGCAAGGCATGAATGAAATCGTGGGGCCCCTCTACTACACCTTTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS CAA 90 bp TCATCCAGGCTCTTGATAAAGTTGTCCCGGATCTCGGCCATGAGGTaGGTGAAGCAGAAAAAGGTGTCTGCCTCGGCGTGCTCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: SSRLLIKLSRISAMR*VKQKKVSASACSFH
Trigger: GTGGAAAGAGCACGCCGAGGCAGACACCTTTTTCTGCTTCACCAACCTCATGGCCGAGATCCGGGACAACTTTATCAAGAGCCTGGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS TCA 72 bp GCAGTGTCAGCCAGCGGAAGGCAAAGAACTGAGGCTTaGTGTTCTGCTCTTGCAGTTTCAGGTAGAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AVSASGRQRTEA*CSALAVSGRAP
Trigger: TGGAGCTCTACCTGAAACTGCAAGAGCAGAACATCAAGCCTCAGTTCTTTGCCTTCCGCTGGCTGACACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372648.10
CDS GCA 72 bp ATGTCTGGGCACAACCTCCGGACATCTTTGTCGATCTaGAGCAGCACCTCGTTGTCCTTGAAGTACGTGTTC +
Preference number: 6 (lower is better)
Translates to: MSGHNLRTSLSI*SSTSLSLKYVF
Trigger: GAACACGTACTTCAAGGACAACGAGGTGCTGCTGCAGATCGACAAAGATGTCCGGAGGTTGTGCCCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp TCCTCAAAAGTCACATCCTCCCTGGACACACCCATGTaGGCCTTGGCAATGCCAGGCTGGATGATCATTTCC +
Preference number: 6 (lower is better)
Translates to: SSKVTSSLDTPM*ALAMPGWMIIS
Trigger: GGAAATGATCATCCAGCCTGGCATTGCCAAGGCCAACATGGGTGTGTCCAGGGAGGATGTGACTTTTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp CACTCCGGTTCCGGGCCACCGTCTGAGATTTCAGTGTaGTCTGTTCCACTCTCTTACGAAGGGTTTCAAACT +
Preference number: 6 (lower is better)
Translates to: HSGSGPPSEISV*SVPLSYEGFQT
Trigger: AGTTTGAAACCCTTCGTAAGAGAGTGGAACAGACAACACTGAAATCTCAGACGGTGGCCCGGAACCGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
CDS CAA 72 bp TCCTTCAGGACATCCTGGAAATCTGCAATTCGGCTCTaGTGCAGACTTGACATGGTGTTGACTTCCGGACCC +
Preference number: 6 (lower is better)
Translates to: SFRTSWKSAIRL*CRLDMVLTSGP
Trigger: GGGTCCGGAAGTCAACACCATGTCAAGTCTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTCCTGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CAA 72 bp ACCTCATACTCATTTAGGGATGATGGCACAGAGTTCTaGTGTGGGGAGCTCATATTTGTGACCCCACTCCGG +
Preference number: 6 (lower is better)
Translates to: TSYSFRDDGTEF*CGELIFVTPLR
Trigger: CCGGAGTGGGGTCACAAATATGAGCTCCCCACACAAGAACTCTGTGCCATCATCCCTAAATGAGTATGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372648.10
ENST00000466056.1
CDS TCA 72 bp ACTAAAGCTGAGTTCCCGCAGCTTTTCCAATGCAATTaGGGGCTCCTTCAGGACATCCTGGAAATCTGCAAT +
Preference number: 6 (lower is better)
Translates to: TKAEFPQLFQCN*GLLQDILEICN
Trigger: ATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAAGCTGCGGGAACTCAGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5
CDS CCA 72 bp TTTTCCAATGCAATTGAGGGCTCCTTCAGGACATCCTaGAAATCTGCAATTCGGCTCTTGTGCAGACTTGAC +
Preference number: 6 (lower is better)
Translates to: FSNAIEGSFRTS*KSAIRLLCRLD
Trigger: GTCAAGTCTGCACAAGAGCCGAATTGCAGATTTCCAGGATGTCCTGAAGGAGCCCTCAATTGCATTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223865.8
ENST00000372648.10
ENST00000466056.1
ENST00000475097.5