RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D10C (Homo sapiens)

Ensembl gene IDs: ENSG00000175463

Ensembl transcript IDs: ENST00000312390.9, ENST00000524662.1, ENST00000526387.5, ENST00000526474.1, ENST00000529132.1, ENST00000529635.5, ENST00000530967.6, ENST00000533745.5, ENST00000542590.2

Found 432 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGTCTGGGCTCCTCCGGGGGCTGCACC +
Preference number: 1 (lower is better)
Translates to: PRARVRSPWKVLPRV*GFRRGGLGSSGGCT
Trigger: GGTGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR GCA 90 bp CGGGTCTGGGGTTTCCGCCGCGGTGGTCTGGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACT +
Preference number: 1 (lower is better)
Translates to: RVWGFRRGGLGSSGG*TTIRGTSGLAPRRT
Trigger: AGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCCCAGACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR GCA 90 bp GGCTCCCAGTGTCTCCAGGAGGCCAGGGCAGGCCCCTCGCTGCTCTaGAGTGCCCAGCGCCAGGCGCACCAGTGTCAGCCCCACACGGAA +
Preference number: 1 (lower is better)
Translates to: GSQCLQEARAGPSLL*SAQRQAHQCQPHTE
Trigger: TTCCGTGTGGGGCTGACACTGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTGCCCTGGCCTCCTGGAGACACTGGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR CCA 90 bp CGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGGGCCCCGGCGAGGCGGACCTGTGGC +
Preference number: 1 (lower is better)
Translates to: RGTSGLAPRRTPASC*ASKMAWAPARRTCG
Trigger: GCCACAGGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 90 bp AGGAACCACTCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTaGAGGTGCTTGTGCACGTGCGGAAGCAGCCGCCGCAGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RNHSGRYSRGPTPTC*RCLCTCGSSRRSRA
Trigger: GGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTGGTTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 90 bp TACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTGCACGTaGGGAAGCAGCCGCCGCAGCAGGGCCATGAACACCTCGGCGTCC +
Preference number: 1 (lower is better)
Translates to: YSRGPTPTCCRCLCT*GSSRRSRAMNTSAS
Trigger: GGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 90 bp CACTCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTaGTTGTGCACGTGCGGAAGCAGCCGCCGCAGCAGGGCCATGAAC +
Preference number: 1 (lower is better)
Translates to: HSGRYSRGPTPTCCR*LCTCGSSRRSRAMN
Trigger: GTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 90 bp ATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCTTGGGCCCCGGCGAGGCGGACCTGT +
Preference number: 1 (lower is better)
Translates to: IRGTSGLAPRRTPAS*WASKMAWAPARRTC
Trigger: ACAGGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR CCA 90 bp GAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTC +
Preference number: 1 (lower is better)
Translates to: EPMESLAAGLGFPPR*SGLLRGLHHNPRHL
Trigger: GAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR GCA 90 bp GGCGCGGAATCGGGCAGCTGGGCCAGCTGGGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGCACCACGCTGTGCACCTGTGACATG +
Preference number: 1 (lower is better)
Translates to: GAESGSWASWALISR*RSRSDSTTLCTCDM
Trigger: CATGTCACAGGTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGCCCAGCTGGCCCAGCTGCCCGATTCCGCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR CCA 90 bp CATGGAAAGTCTTGCCGCGGGTCTGGGGTTTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCT +
Preference number: 1 (lower is better)
Translates to: HGKSCRGSGVSAAVV*APPGAAPQSEAPQA
Trigger: AGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGACTTTCCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR TCA 90 bp CTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAG +
Preference number: 1 (lower is better)
Translates to: LGTRTVPWVLTCPTL*PSSMLVPDPVCTTE
Trigger: CTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR GCA 90 bp GTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAG +
Preference number: 1 (lower is better)
Translates to: VPDPVCTTEDLLLPH*LVLARKEAKSPSPK
Trigger: CTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR CCA 90 bp CCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTaGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGT +
Preference number: 1 (lower is better)
Translates to: PSLTPLVLALVLVRA*APGRFHGSSRAPLC
Trigger: ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR TCA 90 bp AAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTG +
Preference number: 1 (lower is better)
Translates to: KCGAYLPGRHQPSGN*DWGTLSPWSSQKRV
Trigger: CACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR GCA 90 bp GCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTG +
Preference number: 1 (lower is better)
Translates to: ARKEAKSPSPKSKVR*LFAGPASAIRQLRL
Trigger: CAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp ACCACTCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: TTRAGTAGVRRPPAAGACGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...ACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CCA 90 bp GCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCAGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: AKSPSPKSKVRCLFAGPAGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR GCA 90 bp CATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 2 (lower is better)
Translates to: HGPLRSGCPGRRWSLVGAGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...GGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR TCA 90 bp CATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCCCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: HGPLRSGCPGRRWSLVGAPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...GGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 2 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR TCA 90 bp CCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCC +
Preference number: 2 (lower is better)
Translates to: PLVLALVLVRAWAPGRFHAAAGP*TPRRPA
Trigger: GGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGC...ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR GCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp CCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAGCCTCAAAGATGGCTTaGGCCCCGGCGAGGCGGACC +
Preference number: 2 (lower is better)
Translates to: PTAWSLPGRKPSPRVPRVASKMA*APARRT
Trigger: GGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGC...TACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR TCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCCCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 2 (lower is better)
Translates to: PSPKSKVRCLFAGPASAIPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp GTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGCCCACCTGCTGCAGGTaGTTGTGCACGTGCGGAAGC +
Preference number: 2 (lower is better)
Translates to: VHGPLRSGCPGRRWSLVGPTCCR*LCTCGS
Trigger: GCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGG...CCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CCA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 2 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp GCCAGGCGCACCAGTGTCAGCCCCACACGGAACAGTACTCTGGCACCCTCACTGCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 2 (lower is better)
Translates to: ARRTSVSPTRNSTLAPSLRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...CAGTGAGGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTGGTGCGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CCA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCGCTGGGCCTCAAAGATaGCTTGGGCCCCGGCGAGGC +
Preference number: 2 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGAGPQR*LGPRRG
Trigger: GCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGC...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 2 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR TCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCTGGCTTTGGTACTTGTaGGGGCCTGGGCACCAGGAC +
Preference number: 2 (lower is better)
Translates to: PSPKSKVRCLFAGPASAIWLWYL*GPGHQD
Trigger: GTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCA...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp GAACAGTACTCTGGCACCCTCACTGAGGAAGGCATCCCAGACACGCAGCACTGTCCGACGCCCACCTGCTaGAGGTGCTTGTGCACGTGC +
Preference number: 2 (lower is better)
Translates to: EQYSGTLTEEGIPDTQHCPTPTC*RCLCTC
Trigger: GCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGG...ACAGTGCTGCGTGTCTGGGATGCCTTCCTCAGTGAGGGTGCCAGAGTACTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 2 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp GTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGTCCTTCCCCACTGCCTaGTCCTTGCCAGGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: VHGPLRSGCPGRRWSLVGSFPTA*SLPGRK
Trigger: CTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGA...CCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCACCAGGACGGTTCCATaGGTCCTCACGTGCCCCACT +
Preference number: 2 (lower is better)
Translates to: PSPKSKVRCLFAGPASAITRTVP*VLTCPT
Trigger: AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGT...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR TCA 90 bp ACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: TCEGLGTRTVPWVLTCPTQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR TCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTG +
Preference number: 2 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPTCPTL*PSSMLV
Trigger: CACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGT...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR TCA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCTCTGGCACCCTCACTaGGGAAGGCATCCCAGACAC +
Preference number: 2 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPLWHPH*GRHPRH
Trigger: GTGTCTGGGATGCCTTCCTCAGTGAGGGTGCCAGAG...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR GCA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR GCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGAGTGCGGTGCCTATTTaGCGGGCCGGCATCAGCCAT +
Preference number: 2 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRSAVPI*RAGISH
Trigger: ATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACT...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCAGTGCGGTGCCTATTTaGCGGGCCGGCATCAGCCAT +
Preference number: 2 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCSAVPI*RAGISH
Trigger: ATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACT...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAG +
Preference number: 2 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRLLLPH*LVLARK
Trigger: CTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAG...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR CCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 2 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp CCAACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 2 (lower is better)
Translates to: PTPSLTPLVLALVLVRAWRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR TCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 2 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR TCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCCTCCATGCTAGTGCCTaGCCCAGTATGTACCACGGA +
Preference number: 2 (lower is better)
Translates to: PSPKSKVRCLFAGPASAILHASA*PSMYHG
Trigger: TCCGTGGTACATACTGGGTCAGGCACTAGCATGGAG...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR GCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 2 (lower is better)
Translates to: PSPKSKVRCLFAGPASAIKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR CCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 2 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CCA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCATTCCTGGTGCCCTCTaGGGTCCCTTGACTCAGCCA +
Preference number: 2 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGIPGAL*GPLTQP
Trigger: TGGCTGAGTCAAGGGACCCCAGAGGGCACCAGGAAT...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR CAA 90 bp AAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATaGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGT +
Preference number: 2 (lower is better)
Translates to: KVRCLFAGPASAIRQ*RLGDTKSMVLSEAG
Trigger: ACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR GCA 90 bp AGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGAGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: SKVRCLFAGPASAIRQLRAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...TCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR GCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGAAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 2 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR CCA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCGGGACACTAAGTCCATaGTCCTCTCAGAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGGTLSP*SSQKRV
Trigger: CACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCC...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR TCA 72 bp TGTGCACGTGCGGAAGCAGCCGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCCGCACAGCCTCCGGGC +
Preference number: 3 (lower is better)
Translates to: CARAEAAAAAGP*TPRRPAAQPPG
Trigger: GCCCGGAGGCTGTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 72 bp GGTTTCCGCCGCGGTGGTCTGGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACCTCAGGCTTGGCGCCT +
Preference number: 3 (lower is better)
Translates to: GFRRGGLGSSGG*TTIRGTSGLAP
Trigger: AGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR GCA 72 bp TCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTaGAGGTGCTTGTGCACGTGCGGAAGCAGCCGCCGC +
Preference number: 3 (lower is better)
Translates to: SGRYSRGPTPTC*RCLCTCGSSRR
Trigger: GCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR CCA 72 bp TCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGGGCCCCGGCGAGGCGG +
Preference number: 3 (lower is better)
Translates to: SGLAPRRTPASC*ASKMAWAPARR
Trigger: CCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR-3UTR CAA 90 bp GGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTGCACGTGCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 3 (lower is better)
Translates to: GQVQQGSDAHLLQVLVHVRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...CACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 72 bp GGTCCGACGCCCACCTGCTGCAGGTGCTTGTGCACGTaGGGAAGCAGCCGCCGCAGCAGGGCCATGAACACC +
Preference number: 3 (lower is better)
Translates to: GPTPTCCRCLCT*GSSRRSRAMNT
Trigger: GGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 72 bp TCGGGCAGCTGGGCCAGCTGGGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGCACCACGCTGTGCACC +
Preference number: 3 (lower is better)
Translates to: SGSWASWALISR*RSRSDSTTLCT
Trigger: GGTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGCCCAGCTGGCCCAGCTGCCCGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR GCA 72 bp ACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCTTGGGCCCCGGCGAGG +
Preference number: 3 (lower is better)
Translates to: TSGLAPRRTPAS*WASKMAWAPAR
Trigger: CCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
3UTR CCA 72 bp CGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGTCTGGGCTCCTCCGGG +
Preference number: 3 (lower is better)
Translates to: RVRSPWKVLPRV*GFRRGGLGSSG
Trigger: CCCGGAGGAGCCCAGACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CAA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 3 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CAA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAAGTGCGGTGCCTATTaGCCGGGCCGGCATCAGCCA +
Preference number: 3 (lower is better)
Translates to: PSPKSKVRCLFAGPASAIKCGAY*PGRHQP
Trigger: TGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTT...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR TCA 72 bp AGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTGCCTGACCCAGTATGT +
Preference number: 3 (lower is better)
Translates to: RTVPWVLTCPTL*PSSMLVPDPVC
Trigger: ACATACTGGGTCAGGCACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR GCA 72 bp GAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCATCAGCCATCAGGCAA +
Preference number: 3 (lower is better)
Translates to: EAKSPSPKSKVR*LFAGPASAIRQ
Trigger: TTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR GCA 72 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTaGGGTGCCTATTTGCCGGGCCGGCATCAGCCATCA +
Preference number: 3 (lower is better)
Translates to: GRKPSPRVPRVK*GAYLPGRHQPS
Trigger: TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR-3UTR CAA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGCCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CAA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR TCA 72 bp GCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGTCCATGGTCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: AYLPGRHQPSGN*DWGTLSPWSSQ
Trigger: CTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CAA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 3 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVSAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
3UTR-3UTR CAA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 3 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPSAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AGCAGGGCCATGAACACCTCGGCGTCCAGCCGCACAGCCTCCGGGCCCCTGCCCGGGCCTGGGCCATGGTaGCCGGGGCCTTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: SRAMNTSASSRTASGPLPGPGPW*PGPSMP
Trigger: TGGCATCGAAGGCCCCGGGCACCATGGCCCAGGCCC...GGGCAGGGGCCCGGAGGCTGTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR GCA 90 bp CCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCAGGCCCCTCGCTGCTCTaGAGTGCCCAGCGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PPGAAPQSEAPQAWRLVAGPSLL*SAQRQA
Trigger: CGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCC...TGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GGGGGCCCCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGTCGGCCTGGCGATATaGGCCAGGCCCGCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: GGPGPESGAHGKSCRGSGVGLAI*ARPAEL
Trigger: GAGCTCAGCGGGCCTGGCCCATATCGCCAGGCCGAC...CCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGGGGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp TCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSGGCTTIRGTSGLAPRRSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...GCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GGGGGCCCCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: GGPGPESGAHGKSCRGSGRPAEL*VGPQGA
Trigger: AGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCT...CCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGGGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCGGGCCTGGGCCATGGTaGCCGGGGCCTCCTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GLHHNPRHLRLGASSHSCGPGPW*PGPPPL
Trigger: GAGAGGAGGAGGCCCCGGGCACCATGGCCCAGGCCC...GCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526387.5
3UTR CAA 72 bp TCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCTGCCAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SGGCTTIRGTSG*APRRTPASCWA
Trigger: GGCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GGGGGCCCCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGAGCTGGAGTCATCCTaGAGCTCGGGAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GGPGPESGAHGKSCRGSGELESS*SSGGCT
Trigger: GGTGCAGCCTCCCGAGCTGCAGGATGACTCCAGCTC...CCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGGGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCGGCCCCTCGCTGCTCTaGAGTGCCCAGCGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLGPSLL*SAQRQA
Trigger: CGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCC...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GTGCGGAAGCAGCCGCCGCAGCAGGGCCATGAACACCTCGGCGTCCAGCCGCACAGGTGCTTGTGCACGTaGGGAAGCAGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: VRKQPPQQGHEHLGVQPHRCLCT*GSSRRS
Trigger: GCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCT...GTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR CCA 90 bp GTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCTGGGTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLSEAGVQEGGGASLGPGSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...CCCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTTCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GGGGGCCCCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGTGGCTTTGGTACTTGTaGGGGCCTGGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: GGPGPESGAHGKSCRGSGWLWYL*GPGHQD
Trigger: GTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCA...CCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGGGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLAAAGP*TPRRPA
Trigger: GGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGC...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGTTGGCGGATGAGGTCTaGAGGTGGGTGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VVWAPPGAAPQSEAPQAWLADEV*RWVARP
Trigger: GGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAA...CCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp AATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTGGGCACCTGCAGGAGCCCCTaGCGTGGCCCTGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: NPRHLRLGASSHSCQLLGTCRSP*RGPEAT
Trigger: TGTCGCCTCAGGGCCACGGCAGGGGCTCCTGCAGGT...GCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR GCA 90 bp GTGCGGAAGCAGCCGCCGCAGCAGGGCCATGAACACCTCGGCGTCCAGCCGCACCCCACCTGCTGCAGGTaGTTGTGCACGTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: VRKQPPQQGHEHLGVQPHPTCCR*LCTCGS
Trigger: GCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGG...GTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR CCA 90 bp GGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCGCCTCAAAGATGGCTTaGGCCCCGGCGAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: GLHHNPRHLRLGASSHSCASKMA*APARRT
Trigger: GGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGC...GCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGTTTCCGGCTGGGCCTCAAAGATaGCTTGGGCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: PGPSQEPMESLAAGLGFPAGPQR*LGPRRG
Trigger: GCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGC...CGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: LGSSGGCTTIRGTSGLAPEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...AGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp ACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCACTCCCGGCCAGCCTaGGGCCTGGCTGCGGGGTCA +
Preference number: 4 (lower is better)
Translates to: TCEGLGTRTVPWVLTCPTHSRPA*GLAAGS
Trigger: TGACCCCGCAGCCAGGCCCCAGGCTGGCCGGGAGTG...AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542590.2
CDS-3UTR TCA 90 bp CGGTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RWSGLLRGLHHNPRHLRLRPAEL*VGPQGA
Trigger: AGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCT...AAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCTCTCCCGTTGGCGGATaGGGTCTGCAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLHHNPRHLRLGASSHSCSPVGG*GLQVGG
Trigger: GCCACCCACCTGCAGACCTCATCCGCCAACGGGAGA...GCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp CCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGTTTCCGTCTCCCGTTGGCGGATaGGGTCTGCAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGPSQEPMESLAAGLGFPSPVGG*GLQVGG
Trigger: GCCACCCACCTGCAGACCTCATCCGCCAACGGGAGA...CGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTGCACGTGCTGCAGGTCCCGCTCTaGCAGCACCACGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GQVQQGSDAHLLQVLVHVLQVPL*QHHAVH
Trigger: GTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAG...CACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR TCA 90 bp CGGTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTCCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RWSGLLRGLHHNPRHLRLPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...AAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCAGTCTCCAGGGGCCTCTaGCAGCTCCTGATAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PPGAAPQSEAPQAWRLVAVSRGL*QLLIGA
Trigger: GGCACCTATCAGGAGCTGGCAGAGGCCCCTGGAGAC...TGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTGTCTCCAGGGGCCTCTaGCAGCTCCTGATAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LGSSGGCTTIRGTSGLAPVSRGL*QLLIGA
Trigger: GGCACCTATCAGGAGCTGGCAGAGGCCCCTGGAGAC...AGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp TGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGCTCGCTGCTCTGCAGTaGCCAGCGCCAGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: CEGLGTRTVPWVLTCPTLLAALQ*PAPGAP
Trigger: TGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAG...CAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCAGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PPGAAPQSEAPQAWRLVAALISR*RSRSDS
Trigger: GCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGC...TGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGGGTCCGACGCCCACCTaGTGCAGGTGCTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GAAPQSEAPQAWRLVALLGPTPT*CRCLCT
Trigger: CGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACC...CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR CCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGAGGTCTGCAGGTGGGTaGCCCGGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLRSAGG*PGPGSA
Trigger: AGCAGAGCCAGGGCCGGGCCACCCACCTGCAGACCT...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCTGGGAGGTCTGCAGGTGGGTaGCCCGGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLSEAGVQEGGGASLGPGRSAGG*PGPGSA
Trigger: AGCAGAGCCAGGGCCGGGCCACCCACCTGCAGACCT...CCCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGCCTCAAAGATGGCTTaGGCCCCGGCGAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLASKMA*APARRT
Trigger: GGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCGCTGGGCCTCAAAGATaGCTTGGGCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLAGPQR*LGPRRG
Trigger: GCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGC...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCRPAEL*VGPQGA
Trigger: AGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCT...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTCTGCAGGTCCCGCTCTaGCAGCACCACGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCLQVPL*QHHAVH
Trigger: GTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAG...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LGSSGGCTTIRGTSGLAPTCPTL*PSSMLV
Trigger: CACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGT...AGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp TCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: SSGGCTTIRGTSGLAPRRAGQTG*LSGTAS
Trigger: AGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGC...GCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGGTCTCCAGGGGCCTCTaGCAGCTCCTGATAGGTGCC +
Preference number: 4 (lower is better)
Translates to: VVWAPPGAAPQSEAPQAWVSRGL*QLLIGA
Trigger: GGCACCTATCAGGAGCTGGCAGAGGCCCCTGGAGAC...CCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp AAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGGGCCCCTCGCTGCTCTaGAGTGCCCAGCGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: KPSPRVPRVKCGAYLPGRGPSLL*SAQRQA
Trigger: CGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCC...CCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAGGGCAGGCCCCTCGCTaGTCTGCAGTGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PTAWSLPGRKPSPRVPRVGQAPR*SAVPSA
Trigger: GGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTGCCC...TACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CGGTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTCCAGAAGGCCTCCTCTaGGGGCAGGTGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: RWSGLLRGLHHNPRHLRLPEGLL*GQVHEQ
Trigger: CTGCTCATGCACCTGCCCCCAGAGGAGGCCTTCTGG...AAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: HGPLRSGCPGRRWSLVGAVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...GGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGTGGGGAGAACCAGTGTaGGGGGCCACTCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGWGEPV*GATPGQ
Trigger: CTGGCCGGGAGTGGCCCCTCACACTGGTTCTCCCCA...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTTGGGGAGAACCAGTGTaGGGGGCCACTCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSWGEPV*GATPGQ
Trigger: CTGGCCGGGAGTGGCCCCTCACACTGGTTCTCCCCA...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGTGCTGCCCGTGGCCCTaGGGCGACACAAACATCTCG +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLCCPWP*GDTNIS
Trigger: CGAGATGTTTGTGTCGCCTCAGGGCCACGGGCAGCA...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR TCA 90 bp CCGGGCCCGAGTCAGGAGCCCATGGAAAGTCTTGCCGCGGGTCTGGGGTTTCCGCTCTGGCACCCTCACTaGGGAAGGCATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PGPSQEPMESLAAGLGFPLWHPH*GRHPRH
Trigger: GTGTCTGGGATGCCTTCCTCAGTGAGGGTGCCAGAG...CGGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCGGGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR GCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGTTGGCGGATGAGGTCTaGAGGTGGGTGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGLADEV*RWVARP
Trigger: GGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAA...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCCCAGCTCCTGATAGGTaGCAGGGCTGTTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSGGCTTIRGTSGLAPRRPAPDR*QGCSSG
Trigger: GCCAGAAGAACAGCCCTGGCACCTATCAGGAGCTGG...GCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCAACCTGCAGGAGCCCCTaGCGTGGCCCTGAGGCGACA +
Preference number: 4 (lower is better)
Translates to: AKSPSPKSKVRCLFAGPATCRSP*RGPEAT
Trigger: TGTCGCCTCAGGGCCACGGCAGGGGCTCCTGCAGGT...TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR GCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCCTCGCTGCTCTGCAGTaGCCAGCGCCAGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLLAALQ*PAPGAP
Trigger: TGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAG...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCAACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGGCCCCTCGCTGCTCTaGAGTGCCCAGCGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PTPSLTPLVLALVLVRAWGPSLL*SAQRQA
Trigger: CGCCTGGCGCTGGGCACTGCAGAGCAGCGAGGGGCC...CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGGCAGGCCCCTCGCTaGTCTGCAGTGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AWSLPGRKPSPRVPRVKCGQAPR*SAVPSA
Trigger: GGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTGCCC...GCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAGGGCAGGCCCCTCGCTaGTCTGCAGTGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPGQAPR*SAVPSA
Trigger: GGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTGCCC...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GAAPQSEAPQAWRLVALLRTPAS*WASKMA
Trigger: AGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCG...CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCGGACCCCAAGGAGCTaGAGTCATCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLRTPRS*SHPAAR
Trigger: CCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCG...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCCAGGGCTGTTCTTCTaGCACACATGGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: VVWAPPGAAPQSEAPQAWPGLFF*HTWAPH
Trigger: GTGTGGGGCCCATGTGTGCCAGAAGAACAGCCCTGG...CCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp AATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTGGGCCCAGGGCTGTTCTTCTaGCACACATGGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: NPRHLRLGASSHSCQLLGPGLFF*HTWAPH
Trigger: GTGTGGGGCCCATGTGTGCCAGAAGAACAGCCCTGG...GCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCCAGAAGGCCTCCTCTaGGGGCAGGTGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLPEGLL*GQVHEQ
Trigger: CTGCTCATGCACCTGCCCCCAGAGGAGGCCTTCTGG...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACACGGAACAGTACTCTaGCACCATGTGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: PPGAAPQSEAPQAWRLVAHGTVL*HHVGPV
Trigger: TACGGGCCCCACATGGTGCCAGAGTACTGTTCCGTG...TGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR CCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGCCTCAAAGATGGCTTaGGCCCCGGCGAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGASKMA*APARRT
Trigger: GGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGC...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGCTGGGCCTCAAAGATaGCTTGGGCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGAGPQR*LGPRRG
Trigger: GCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGC...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCATCCGCCGCGGTGGTCTaGGCTCCTCCGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSSAAVV*APPGAA
Trigger: TGCAGCCCCCGGAGGAGCCCAGACCACCGCGGCGGA...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: DWGTLSPWSSQKRVSRKEGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...CTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AWSLPGRKPSPRVPRVKCGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...GCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GLHHNPRHLRLGASSHSCRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...GCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCGGCCCTGGCTCTGCTaGGCTGCCCCCAATGAATCC +
Preference number: 4 (lower is better)
Translates to: GAGFGTCEGLGTRTVPWVRPWLC*AAPNES
Trigger: GGATTCATTGGGGGCAGCTCAGCAGAGCCAGGGCCG...GACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGCCCCTGCCGTGGCCCTaGGGCGACACAAACATCTCG +
Preference number: 4 (lower is better)
Translates to: VHGPLRSGCPGRRWSLVGPLPWP*GDTNIS
Trigger: CGAGATGTTTGTGTCGCCTCAGGGCCACGGCAGGGG...CCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR TCA 90 bp TCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCCCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SPSPKSKVRCLFAGPASAPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...GGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCAAAGP*TPRRPA
Trigger: GGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGC...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTATGCAGCTCGGGAGGCTaGACCAGGTCCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTAWSLPGRKPSPRVPRVCSSGG*TRSSPR
Trigger: CCTGGGGGAGGACCTGGTGCAGCCTCCCGAGCTGCA...TACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCTTGGCGGATGAGGTCTaGAGGTGGGTGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PSPKSKVRCLFAGPASAILADEV*RWVARP
Trigger: GGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAA...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLAGQTG*LSGTAS
Trigger: AGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp TGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: CEGLGTRTVPWVLTCPTLAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...CAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTAGGTCTGCAGGTGGGTaGCCCGGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRRSAGG*PGPGSA
Trigger: AGCAGAGCCAGGGCCGGGCCACCCACCTGCAGACCT...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GAAPQSEAPQAWRLVALLTPASC*ASKMAW
Trigger: CCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGT...CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGGTTTCCGCCGCGGTaGTCTGGGCTCCTCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPGFPPR*SGLLRG
Trigger: CCCCCGGAGGAGCCCAGACCACCGCGGCGGAAACCC...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: CEGLGTRTVPWVLTCPTLRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...CAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCCAGGCGCACCAGTGTCAGCCCCACACGGAACAGTACTCTGGCACCCTCACTGTGTCCAGGAAGGAGGTaGAGCCTCGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ARRTSVSPTRNSTLAPSLCPGRR*SLVGAW
Trigger: CCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACA...CAGTGAGGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTGGTGCGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR CCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGACCAGGACGGTTCCATaGGTCCTCACGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLTRTVP*VLTCPT
Trigger: AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGT...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp TGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGACCAGGACGGTTCCATaGGTCCTCACGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: CEGLGTRTVPWVLTCPTLTRTVP*VLTCPT
Trigger: AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGT...CAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGGTACTTGTGAGGGCCTaGGCACCAGGACGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: VVWAPPGAAPQSEAPQAWVLVRA*APGRFH
Trigger: ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTAC...CCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGATTCCTGGTGCCCTCTaGGGTCCCTTGACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVWAPPGAAPQSEAPQAWIPGAL*GPLTQP
Trigger: TGGCTGAGTCAAGGGACCCCAGAGGGCACCAGGAAT...CCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACCCCCTGCCGTGGCCCTaGGGCGACACAAACATCTCG +
Preference number: 4 (lower is better)
Translates to: VPICRAGISHQAIETGGHPLPWP*GDTNIS
Trigger: CGAGATGTTTGTGTCGCCTCAGGGCCACGGCAGGGG...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR TCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCCTGCAGGTCCCGCTCTaGCAGCACCACGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PSPKSKVRCLFAGPASAILQVPL*QHHAVH
Trigger: GTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAG...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGTGCTGCCCGTGGCCCTaGGGCGACACAAACATCTCG +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGCCPWP*GDTNIS
Trigger: CGAGATGTTTGTGTCGCCTCAGGGCCACGGGCAGCA...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCTGCAGCTCGGGAGGCTaGACCAGGTCCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCCSSGG*TRSSPR
Trigger: CCTGGGGGAGGACCTGGTGCAGCCTCCCGAGCTGCA...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCATGCAGCTCGGGAGGCTaGACCAGGTCCTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSCSSGG*TRSSPR
Trigger: CCTGGGGGAGGACCTGGTGCAGCCTCCCGAGCTGCA...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTTTGGCGGATGAGGTCTaGAGGTGGGTGGCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGLADEV*RWVARP
Trigger: GGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAA...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGACGGTGCAGGTCCCTaGCAATGGTCTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLDGAGP*QWSPST
Trigger: AGTGGATGGAGACCATTGGCAGGGACCTGCACCGTC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGCTCGCTGCTCTGCAGTaGCCAGCGCCAGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: DWGTLSPWSSQKRVSRKELAALQ*PAPGAP
Trigger: TGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAG...CTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGGCAGGCCCCTCGCTaGTCTGCAGTGCCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAGQAPR*SAVPSA
Trigger: GGCGCTGGGCACTGCAGAGCAGCGAGGGGCCTGCCC...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp CCAACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: PTPSLTPLVLALVLVRAWGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GTGCGGAAGCAGCCGCCGCAGCAGGGCCATGAACACCTCGGCGTCCAGCCGCACAGATTTTATTCCTGGTaGCCTCTGGGGTCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: VRKQPPQQGHEHLGVQPHRFYSW*PLGSLD
Trigger: GTCAAGGGACCCCAGAGGGCACCAGGAATAAAATCT...GTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR GCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGGCCTGGGCCATGGTaGCCGGGGCCTTCGATGCCA +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPGPGPW*PGPSMP
Trigger: TGGCATCGAAGGCCCCGGGCACCATGGCCCAGGCCC...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCCGGACCCCAAGGAGCTaGAGTCATCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SPSPKSKVRCLFAGPASARTPRS*SHPAAR
Trigger: CCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCG...GGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTAGGTCTGCAGGTGGGTaGCCCGGCCCTGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSFGAGFGTCEGLGTRTVRSAGG*PGPGSA
Trigger: AGCAGAGCCAGGGCCGGGCCACCCACCTGCAGACCT...AACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCTGGGTTCTTCTGGCACACATaGGCCCCACACAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLSEAGVQEGGGASLGPGFFWHT*APHNRG
Trigger: GCCCCTGTTGTGTGGGGCCCATGTGTGCCAGAAGAA...CCCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCGCAGGTCCCTGCCAATaGTCTCCATCCACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLAGPCQ*SPSTVG
Trigger: ACCCACAGTGGATGGAGACCATTGGCAGGGACCTGC...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTCACGGAACAGTACTCTaGCACCATGTGGGGCCCGTA +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCHGTVL*HHVGPV
Trigger: TACGGGCCCCACATGGTGCCAGAGTACTGTTCCGTG...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000312390.9
ENST00000526387.5
CDS-3UTR CCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGGCCTCAAAGATGGCTTaGGCCCCGGCGAGGCGGACC +
Preference number: 4 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRASKMA*APARRT
Trigger: GGTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGC...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCGCTGGGCCTCAAAGATaGCTTGGGCCCCGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPAGPQR*LGPRRG
Trigger: GCCTCGCCGGGGCCCAAGCCATCTTTGAGGCCCAGC...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGTGTCCAGGAAGGAGGTaGAGCCTCGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGCPGRR*SLVGAW
Trigger: CCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACA...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTATTCCTGGTGCCCTCTaGGGTCCCTTGACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCIPGAL*GPLTQP
Trigger: TGGCTGAGTCAAGGGACCCCAGAGGGCACCAGGAAT...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCATTCCTGGTGCCCTCTaGGGTCCCTTGACTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLIPGAL*GPLTQP
Trigger: TGGCTGAGTCAAGGGACCCCAGAGGGCACCAGGAAT...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVRPAEL*VGPQGA
Trigger: AGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCT...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTGAGCTGCCCCCAATaGATCCATAGCGGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GAGFGTCEGLGTRTVPWVLSCPQ*IHSGRP
Trigger: AGGCCGACCGCTATGGATTCATTGGGGGCAGCTCAG...GACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CAGTGTCAGCCCCACACGGAACAGTACTCTGGCACCCTCACTGAGGAAGGCATCCGGCCCTGGCTCTGCTaGGCTGCCCCCAATGAATCC +
Preference number: 4 (lower is better)
Translates to: QCQPHTEQYSGTLTEEGIRPWLC*AAPNES
Trigger: GGATTCATTGGGGGCAGCTCAGCAGAGCCAGGGCCG...GATGCCTTCCTCAGTGAGGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR TCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCTCTCCCGTTGGCGGATaGGGTCTGCAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGSPVGG*GLQVGG
Trigger: GCCACCCACCTGCAGACCTCATCCGCCAACGGGAGA...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGATCTCCCGTTGGCGGATaGGGTCTGCAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGSPVGG*GLQVGG
Trigger: GCCACCCACCTGCAGACCTCATCCGCCAACGGGAGA...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCTGGGCTCCATGCTAGTGCCTaGCCCAGTATGTACCACGGA +
Preference number: 4 (lower is better)
Translates to: VLSEAGVQEGGGASLGPGLHASA*PSMYHG
Trigger: TCCGTGGTACATACTGGGTCAGGCACTAGCATGGAG...CCCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLTCPTL*PSSMLV
Trigger: CACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGT...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTTGGCTTTGGTACTTGTaGGGGCCTGGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSWLWYL*GPGHQD
Trigger: GTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCA...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCGAGCTGGAGTCATCCTaGAGCTCGGGAGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: PSPKSKVRCLFAGPASAIELESS*SSGGCT
Trigger: GGTGCAGCCTCCCGAGCTGCAGGATGACTCCAGCTC...GATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTGGGCATGGTTTTCTCCCAGTaGGAGGTCATCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: NPRHLRLGASSHSCQLLGMVFSQ*EVISTH
Trigger: GTGGGTGGAGATGACCTCGCACTGGGAGAAAACCAT...GCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLAGQTG*LSGTAS
Trigger: AGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGC...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGGTCTCCAGGGGCCTCTaGCAGCTCCTGATAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KPSPRVPRVKCGAYLPGRVSRGL*QLLIGA
Trigger: GGCACCTATCAGGAGCTGGCAGAGGCCCCTGGAGAC...CCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCCTCGCTGCTCTGCAGTaGCCAGCGCCAGGCGCACCA +
Preference number: 4 (lower is better)
Translates to: PASAIRQLRLGDTKSMVLLAALQ*PAPGAP
Trigger: TGGTGCGCCTGGCGCTGGGCACTGCAGAGCAGCGAG...GAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTRTPAS*WASKMA
Trigger: AGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCG...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCTCCTCCGGGGGCTaGACCACAATCCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPGSSGG*TTIRGT
Trigger: GGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCC...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCAGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: AKSPSPKSKVRCLFAGPAAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCACTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AKSPSPKSKVRCLFAGPALLLPH*LVLARK
Trigger: CTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAG...TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGCTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTLLLPH*LVLARK
Trigger: CTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAG...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAAGGTGCTTGTGCACGTaGGGAAGCAGCCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSRCLCT*GSSRRS
Trigger: GCTGCGGCGGCTGCTTCCGCACGTGCACAAGCACCT...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCAACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGCCGACGCCCACCTGCTaGAGGTGCTTGTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: PTPSLTPLVLALVLVRAWPTPTC*RCLCTC
Trigger: GCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGG...CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCACCGACGCCCACCTGCTaGAGGTGCTTGTGCACGTGC +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSPTPTC*RCLCTC
Trigger: GCACGTGCACAAGCACCTGCAGCAGGTGGGCGTCGG...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCGGTCCGACGCCCACCTaGTGCAGGTGCTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGGPTPT*CRCLCT
Trigger: CGTGCACAAGCACCTGCAGCAGGTGGGCGTCGGACC...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCTGTACCGCCGGGACATaGTTTTCTCCCAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: HGPLRSGCPGRRWSLVGACTAGT*FSPSAR
Trigger: CCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACA...GGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGAGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: AWSLPGRKPSPRVPRVKCEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...GCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: KEAKSPSPKSKVRCLFAGVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...CCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GAGFGTCEGLGTRTVPWVRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...GACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGCGAGTCAGGAGCCCATaGAAAGTCTTGCCGCGGGTC +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTRVRSP*KVLPRV
Trigger: GACCCGCGGCAAGACTTTCCATGGGCTCCTGACTCG...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTACCAGGACGGTTCCATaGGTCCTCACGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSTRTVP*VLTCPT
Trigger: AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGT...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGCGGCCCTGGCTCTGCTaGGCTGCCCCCAATGAATCC +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPRPWLC*AAPNES
Trigger: GGATTCATTGGGGGCAGCTCAGCAGAGCCAGGGCCG...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGTGCACCTGTGACATaGAGGCCTCCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTCAPVT*RPPPAA
Trigger: AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACA...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: LVRAWAPGRFHGSSRAPLQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...GAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTTGGCTTTGGTACTTGTaGGGGCCTGGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRWLWYL*GPGHQD
Trigger: GTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCA...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp AAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: KEAKSPSPKSKVRCLFAGPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...CCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTGACGGTGCAGGTCCCTaGCAATGGTCTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSDGAGP*QWSPST
Trigger: AGTGGATGGAGACCATTGGCAGGGACCTGCACCGTC...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: VPICRAGISHQAIETGGHAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGAGCCTCGTTGGGGCCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: HGPLRSGCPGRRWSLVGAKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...GGCCCCAACGAGGCTCCACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp ACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTGTCCCAAGAGTAAAGTaGGGTGCCTATTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TCEGLGTRTVPWVLTCPTVPRVK*GAYLPG
Trigger: GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGAC...AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KPSPRVPRVKCGAYLPGRLLLPH*LVLARK
Trigger: CTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAG...CCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCCCACCTGCTGCAGGTaGTTGTGCACGTGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGPTCCR*LCTCGS
Trigger: GCTTCCGCACGTGCACAAGCACCTGCAGCAGGTGGG...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCEGLGTRTVPWVLTCPTHFISR*RMRSAG
Trigger: ACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTG...AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGTGTACCGCCGGGACATaGTTTTCTCCCAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGCTAGT*FSPSAR
Trigger: CCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACA...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCAGCAGGTCCCTGCCAATaGTCTCCATCCACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: AKSPSPKSKVRCLFAGPAAGPCQ*SPSTVG
Trigger: ACCCACAGTGGATGGAGACCATTGGCAGGGACCTGC...TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACCAGAAGGCCTCCTCTaGGGGCAGGTGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGPEGLL*GQVHEQ
Trigger: CTGCTCATGCACCTGCCCCCAGAGGAGGCCTTCTGG...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGTPASC*ASKMAW
Trigger: CCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGT...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTTPASC*ASKMAW
Trigger: CCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGT...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGAGGCACCTCAGGCTTaGCGCCTCGTCGCACTCCTG +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPEAPQA*RLVALL
Trigger: CAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTC...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATGTCTTGCCGCGGGTCTaGGGTTTCCGCCGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: LPGRKPSPRVPRVKCGAYVLPRV*GFRRGG
Trigger: ACCACCGCGGCGGAAACCCCAGACCCGCGGCAAGAC...ATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCTGTCCAGGAAGGAGGTaGAGCCTCGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPCPGRR*SLVGAW
Trigger: CCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACA...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCGTACTTGTGAGGGCCTaGGCACCAGGACGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLVLVRA*APGRFH
Trigger: ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTAC...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCGGCCCTGGCTCTGCTaGGCTGCCCCCAATGAATCC +
Preference number: 4 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLRPWLC*AAPNES
Trigger: GGATTCATTGGGGGCAGCTCAGCAGAGCCAGGGCCG...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGCTGCAGGTCCCGCTCTaGCAGCACCACGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEALQVPL*QHHAVH
Trigger: GTGCACAGCGTGGTGCTGTCAGAGCGGGACCTGCAG...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR TCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCATGGCTTTGGTACTTGTaGGGGCCTGGGCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSWLWYL*GPGHQD
Trigger: GTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCA...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp AGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACCCTCTGGGGTCCCTTaGCTCAGCCAACCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SKVRCLFAGPASAIRQLRPSGVP*LSQPLP
Trigger: GGGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGG...TCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCACTCTGGCACCCTCACTaGGGAAGGCATCCCAGACAC +
Preference number: 4 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPLWHPH*GRHPRH
Trigger: GTGTCTGGGATGCCTTCCTCAGTGAGGGTGCCAGAG...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGAGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCT +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGAGQTG*LSGTAS
Trigger: AGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGC...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCCAGCTCCTGATAGGTaGCAGGGCTGTTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KPSPRVPRVKCGAYLPGRPAPDR*QGCSSG
Trigger: GCCAGAAGAACAGCCCTGGCACCTATCAGGAGCTGG...CCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGACAGCACCACGCTGTaGACCTGTGACATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRDSTTL*TCDMKA
Trigger: GGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTC...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKALISR*RSRSDS
Trigger: GCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGC...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGCCCATGGAAAGTCTTaGCGCGGGTCTGGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PLVLALVLVRAWAPGRFHAHGKS*RGSGVS
Trigger: GGAAACCCCAGACCCGCGGCAAGACTTTCCATGGGC...ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGAAGTGCGGTGCCTATTTaGCGGGCCGGCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGSAVPI*RAGISH
Trigger: ATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACT...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGAGTGCGGTGCCTATTTaGCGGGCCGGCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: DWGTLSPWSSQKRVSRKESAVPI*RAGISH
Trigger: ATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACT...CTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGCTCCTCCTTCCCCACTaGCTGGTCCTTGCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DWGTLSPWSSQKRVSRKELLLPH*LVLARK
Trigger: CTTCCTGGCAAGGACCAGGCAGTGGGGAAGGAGGAG...CTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTCTGTAGATTTTATTCCTGGTaGCCTCTGGGGTCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: VRAWAPGRFHGSSRAPLCRFYSW*PLGSLD
Trigger: GTCAAGGGACCCCAGAGGGCACCAGGAATAAAATCT...ACAGAGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGCGGACCCCAAGGAGCTaGAGTCATCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPRTPRS*SHPAAR
Trigger: CCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCG...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCGGACCCCAAGGAGCTaGAGTCATCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: KEAKSPSPKSKVRCLFAGRTPRS*SHPAAR
Trigger: CCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCG...CCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLHFISR*RMRSAG
Trigger: ACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTG...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCCAGGGCTGTTCTTCTaGCACACATGGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRPGLFF*HTWAPH
Trigger: GTGTGGGGCCCATGTGTGCCAGAAGAACAGCCCTGG...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCCAGGGCTGTTCTTCTaGCACACATGGGCCCCACAC +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGPGLFF*HTWAPH
Trigger: GTGTGGGGCCCATGTGTGCCAGAAGAACAGCCCTGG...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACGCAGGTCCCTGCCAATaGTCTCCATCCACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VPICRAGISHQAIETGGHAGPCQ*SPSTVG
Trigger: ACCCACAGTGGATGGAGACCATTGGCAGGGACCTGC...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGCCAGAAGGCCTCCTCTaGGGGCAGGTGCATGAGCAG +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKPEGLL*GQVHEQ
Trigger: CTGCTCATGCACCTGCCCCCAGAGGAGGCCTTCTGG...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGTCCAGGAAGGAGGTaGAGCCTCGTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKCPGRR*SLVGAW
Trigger: CCAGGCCCCAACGAGGCTCCACCTCCTTCCTGGACA...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCGGGACACTAAGTCCATaGTCCTCTCAGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GAGFGTCEGLGTRTVPWVGTLSP*SSQKRV
Trigger: CACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCC...GACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTATCCTTCCCCACTGCCTaGTCCTTGCCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTAWSLPGRKPSPRVPRVSFPTA*SLPGRK
Trigger: CTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGA...TACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGTACTTGTGAGGGCCTaGGCACCAGGACGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRVLVRA*APGRFH
Trigger: ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTAC...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGTGCACCTGTGACATaGAGGCCTCCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPCAPVT*RPPPAA
Trigger: AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACA...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp CGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCATGTGCACCTGTGACATaGAGGCCTCCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: RVPRVKCGAYLPGRHQPSCAPVT*RPPPAA
Trigger: AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACA...TGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGACGTGCCCCACTCTGTaGCCCTCCTCCATGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKTCPTL*PSSMLV
Trigger: CACTAGCATGGAGGAGGGTCACAGAGTGGGGCACGT...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCATGCCTTTCCGGCACTaGATCTTTACCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GLHHNPRHLRLGASSHSCMPFRH*IFTFLY
Trigger: GTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCAT...GCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCGACGGTGCAGGTCCCTaGCAATGGTCTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPDGAGP*QWSPST
Trigger: AGTGGATGGAGACCATTGGCAGGGACCTGCACCGTC...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAGACGGTGCAGGTCCCTaGCAATGGTCTCCATCCACT +
Preference number: 4 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPDGAGP*QWSPST
Trigger: AGTGGATGGAGACCATTGGCAGGGACCTGCACCGTC...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGACAGCACCACGCTGTaGACCTGTGACATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGDSTTL*TCDMKA
Trigger: GGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTC...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCGACAGCACCACGCTGTaGACCTGTGACATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCDSTTL*TCDMKA
Trigger: GGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTC...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAALISR*RSRSDS
Trigger: GCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGC...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp AGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGAGCCTTGATCTCCCGCTaGAGGTCCCGCTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SKVRCLFAGPASAIRQLRALISR*RSRSDS
Trigger: GCTGTCAGAGCGGGACCTGCAGCGGGAGATCAAGGC...TCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKRTPAS*WASKMA
Trigger: AGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCG...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGTCCCAAGAGTAAAGTaGGGTGCCTATTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRVPRVK*GAYLPG
Trigger: GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGAC...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCTGTACCGCCGGGACATaGTTTTCTCCCAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCCTAGT*FSPSAR
Trigger: CCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACA...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCTGTACCGCCGGGACATaGTTTTCTCCCAGTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGCTAGT*FSPSAR
Trigger: CCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACA...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGATTCTTCTGGCACACATaGGCCCCACACAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: SLTPLVLALVLVRAWAPGFFWHT*APHNRG
Trigger: GCCCCTGTTGTGTGGGGCCCATGTGTGCCAGAAGAA...TCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGCAGGTCCCTGCCAATaGTCTCCATCCACTGTGGGT +
Preference number: 4 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVAGPCQ*SPSTVG
Trigger: ACCCACAGTGGATGGAGACCATTGGCAGGGACCTGC...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTTCCTTCCCCACTGCCTaGTCCTTGCCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGSFPTA*SLPGRK
Trigger: CTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGA...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGTACTTGTGAGGGCCTaGGCACCAGGACGGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGVLVRA*APGRFH
Trigger: ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTAC...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp ACCACTCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTAGAAGATTTTATTCCTaGTGCCCTCTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TTRAGTAGVRRPPAAGACRRFYS*CPLGSL
Trigger: AAGGGACCCCAGAGGGCACCAGGAATAAAATCTTCT...ACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR TCA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: VPICRAGISHQAIETGGHQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCCTCCATGCTAGTGCCTaGCCCAGTATGTACCACGGA +
Preference number: 4 (lower is better)
Translates to: AWSLPGRKPSPRVPRVKCLHASA*PSMYHG
Trigger: TCCGTGGTACATACTGGGTCAGGCACTAGCATGGAG...GCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACATGGTTTTCTCCCAGTaGGAGGTCATCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: VPICRAGISHQAIETGGHMVFSQ*EVISTH
Trigger: GTGGGTGGAGATGACCTCGCACTGGGAGAAAACCAT...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTATGGTTTTCTCCCAGTaGGAGGTCATCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRMVFSQ*EVISTH
Trigger: GTGGGTGGAGATGACCTCGCACTGGGAGAAAACCAT...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGCCAGCTCCTGATAGGTaGCAGGGCTGTTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKPAPDR*QGCSSG
Trigger: GCCAGAAGAACAGCCCTGGCACCTATCAGGAGCTGG...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATCGCACTCCTGCCAGCTaGTGGGCCTCAAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LPGRKPSPRVPRVKCGAYRTPAS*WASKMA
Trigger: AGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGTGCG...ATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGAGTGCGGTGCCTATTTaGCGGGCCGGCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLSAVPI*RAGISH
Trigger: ATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACT...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGGTCCCAAGAGTAAAGTaGGGTGCCTATTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRVPRVK*GAYLPG
Trigger: GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGAC...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGTCCCAAGAGTAAAGTaGGGTGCCTATTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PLVLALVLVRAWAPGRFHVPRVK*GAYLPG
Trigger: GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGAC...ATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCAGATTTTATTCCTGGTaGCCTCTGGGGTCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLRFYSW*PLGSLD
Trigger: GTCAAGGGACCCCAGAGGGCACCAGGAATAAAATCT...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGHFISR*RMRSAG
Trigger: ACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTG...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTTCTTCTGGCACACATaGGCCCCACACAACAGGGGC +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKFFWHT*APHNRG
Trigger: GCCCCTGTTGTGTGGGGCCCATGTGTGCCAGAAGAA...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTGGGGACACTAAGTCCATaGTCCTCTCAGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: WGTLSPWSSQKRVSRKEVGTLSP*SSQKRV
Trigger: CACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCC...CACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CCA 90 bp AGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCGGGACACTAAGTCCATaGTCCTCTCAGAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RKPSPRVPRVKCGAYLPGGTLSP*SSQKRV
Trigger: CACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCC...GCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGTCCTTCCCCACTGCCTaGTCCTTGCCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPSFPTA*SLPGRK
Trigger: CTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGA...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGACCAGGACGGTTCCATaGGTCCTCACGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLTRTVP*VLTCPT
Trigger: AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGT...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp ACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTGCCCCACTAGAAGATTTTATTCCTaGTGCCCTCTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: TCEGLGTRTVPWVLTCPTRRFYS*CPLGSL
Trigger: AAGGGACCCCAGAGGGCACCAGGAATAAAATCTTCT...AGTGGGGCACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp TTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTGTGCACCTGTGACATaGAGGCCTCCTCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPGRKPSPRVPRVKCGAYCAPVT*RPPPAA
Trigger: AGCTGCAGGAGGAGGCCTTCATGTCACAGGTGCACA...ATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATCCAGCTCCTGATAGGTaGCAGGGCTGTTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPGRKPSPRVPRVKCGAYPAPDR*QGCSSG
Trigger: GCCAGAAGAACAGCCCTGGCACCTATCAGGAGCTGG...ATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGGACAGCACCACGCTGTaGACCTGTGACATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLDSTTL*TCDMKA
Trigger: GGCCTTCATGTCACAGGTGCACAGCGTGGTGCTGTC...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp ACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGAAGAGTAAAGTGCGGTaGCTATTTGCCGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TAWSLPGRKPSPRVPRVKKSKVR*LFAGPA
Trigger: TGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTT...CTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp CCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PASAIRQLRLGDTKSMVLHFISR*RMRSAG
Trigger: ACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTG...GAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp TTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATACTCCTGCCAGCTGCTaGGCCTCAAAGATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LPGRKPSPRVPRVKCGAYTPASC*ASKMAW
Trigger: CCAAGCCATCTTTGAGGCCCAGCAGCTGGCAGGAGT...ATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGATCCTTCCCCACTGCCTaGTCCTTGCCAGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKVRCLFAGPASAIRQLRSFPTA*SLPGRK
Trigger: CTTCCTTCCTGGCAAGGACCAGGCAGTGGGGAAGGA...TCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp GGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGAGAAGATTTTATTCCTaGTGCCCTCTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GFGTCEGLGTRTVPWVLTRRFYS*CPLGSL
Trigger: AAGGGACCCCAGAGGGCACCAGGAATAAAATCTTCT...CGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
3UTR CAA 72 bp TGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATaGAGACTGGGGGACACTAAGTCCATGGTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: CLFAGPASAIRQ*RLGDTKSMVLS
Trigger: TGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGATGGTTTTCTCCCAGTaGGAGGTCATCTCCACCCAC +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPMVFSQ*EVISTH
Trigger: GTGGGTGGAGATGACCTCGCACTGGGAGAAAACCAT...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCAGATTTTATTCCTGGTaGCCTCTGGGGTCCCTTGAC +
Preference number: 4 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGRFYSW*PLGSLD
Trigger: GTCAAGGGACCCCAGAGGGCACCAGGAATAAAATCT...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR TCA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGCAGCCATCAGGCAATTaGGACTGGGGGACACTAAGT +
Preference number: 4 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAQPSGN*DWGTLS
Trigger: ACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTG...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR GCA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCATGCCTTTCCGGCACTaGATCTTTACCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPMPFRH*IFTFLY
Trigger: GTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCAT...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCAATGCCTTTCCGGCACTaGATCTTTACCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPMPFRH*IFTFLY
Trigger: GTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCAT...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CCA 90 bp AAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGAGAAGATTTTATTCCTaGTGCCCTCTGGGGTCCCTT +
Preference number: 4 (lower is better)
Translates to: KEAKSPSPKSKVRCLFAGRRFYS*CPLGSL
Trigger: AAGGGACCCCAGAGGGCACCAGGAATAAAATCTTCT...CCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR GCA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGATGCCTTTCCGGCACTaGATCTTTACCTTCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPMPFRH*IFTFLY
Trigger: GTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCAT...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp CTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTGGCGCCTGGCCTCAAAGATGGCTaGGGCCCCGGCGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: LGSSGGCTTIRGTSGLAPGLKDG*GPGEAD
Trigger: GTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCC...AGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS CCA 90 bp CTGGCAGGCCCCAGGCACAGCTCATCAGCAGGCAGGGGCCCACTTTaGGTGGCAGGGAGCAAAGGCCGGAGGTGCTGGGACACAGGGTGG +
Preference number: 5 (lower is better)
Translates to: LAGPRHSSSAGRGPL*VAGSKGRRCWDTGW
Trigger: CCACCCTGTGTCCCAGCACCTCCGGCCTTTGCTCCCTGCCACCCAAAGTGGGCCCCTGCCTGCTGATGAGCTGTGCCTGGGGCCTGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp CCAGCGCCAGGCGCACCAGTGTCAGCCCCACACGGAACAGTACTCTaGCACCTGCAGGCCGGGGGCTTATTCACTGGGAGGCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PAPGAPVSAPHGTVL*HLQAGGLFTGRPAL
Trigger: CAGGGCCGGCCTCCCAGTGAATAAGCCCCCGGCCTGCAGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTGGTGCGCCTGGCGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524662.1
ENST00000526474.1
CDS-3UTR CAA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGGCCTCAAAGATGGCTaGGGCCCCGGCGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLGLKDG*GPGEAD
Trigger: GTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS TCA 90 bp TCCATAGCGGTCGGCCTGGCGATATGGGCCAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCTGGAGTCATCCTGCAGCTCGGGAGG +
Preference number: 5 (lower is better)
Translates to: SIAVGLAIWARPAEL*VGPQGAGVILQLGR
Trigger: CCTCCCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCTGGCCCATATCGCCAGGCCGACCGCTATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS GCA 90 bp CCCCACACAACAGGGGCCAGCATCGGGCGCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCTTTACCTGTGGGTGAGGCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: PHTTGASIGRAGQTG*LSGTASLPVGEAKG
Trigger: GCCCTTGGCCTCACCCACAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGTTGTGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp TCCACCCACTTCATCTCCCGTTGGCGGATGAGGTCTGCAGGTGGGTaGCCCGGCCTGGGGGTGCATGGCACAGGTATCCAGACGCTGGGC +
Preference number: 5 (lower is better)
Translates to: STHFISRWRMRSAGG*PGLGVHGTGIQTLG
Trigger: GCCCAGCGTCTGGATACCTGTGCCATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS CCA 90 bp TTGGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCTGGGGGTGCATaGCACAGGTATCCAGACGCTGGGCAGCTGTTACCCAAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: LADEVCRWVARPGGA*HRYPDAGQLLPKAH
Trigger: GTGGGCCTTGGGTAACAGCTGCCCAGCGTCTGGATACCTGTGCCATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533745.5
CDS-3UTR CAA 90 bp CGGTGGTCTGGGCTCCTCCGGGGGCTGCACCACAATCCGAGGCACCTCAGGCTTAAGTGCGGTGCCTATTaGCCGGGCCGGCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: RWSGLLRGLHHNPRHLRLKCGAY*PGRHQP
Trigger: TGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTT...AAGCCTGAGGTGCCTCGGATTGTGGTGCAGCCCCCGGAGGAGCCCAGACCACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CAA 90 bp CACCACAATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGGCCCTCTGGGGTCCCTaGACTCAGCCAACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HHNPRHLRLGASSHSCQLALWGP*TQPTPS
Trigger: GGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGGC...CAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATTGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS CCA 90 bp TGGGTGAGGCCAAGGGCTCCACTAGGCAGCCTCCATAGCTCCTGCTaGCAGGCCCCAGGCACAGCTCATCAGCAGGCAGGGGCCCACTTT +
Preference number: 5 (lower is better)
Translates to: WVRPRAPLGSLHSSC*QAPGTAHQQAGAHF
Trigger: AAAGTGGGCCCCTGCCTGCTGATGAGCTGTGCCTGGGGCCTGCCAGCAGGAGCTATGGAGGCTGCCTAGTGGAGCCCTTGGCCTCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 90 bp CCCCACACAACAGGGGCCAGCATCGGGCGCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCTTTACCTTCTTGTACCGCCGGGACA +
Preference number: 5 (lower is better)
Translates to: PHTTGASIGRAGQTG*LSGTASLPSCTAGT
Trigger: TGTCCCGGCGGTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGTTGTGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529132.1
ENST00000529635.5
ENST00000530967.6
ENST00000533745.5
ENST00000542590.2
CDS GCA 90 bp TGTCCACACCCCAAGGCTCCAGTCCCCTCCAAGCCACCAGCTTCCTaGCAGGAGCCCAGGGCTACTGATGCCTTCACACCAAGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: CPHPKAPVPSKPPAS*QEPRATDAFTPSPP
Trigger: GGGAGGGCTTGGTGTGAAGGCATCAGTAGCCCTGGGCTCCTGGCAGGAAGCTGGTGGCTTGGAGGGGACTGGAGCCTTGGGGTGTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 90 bp CGGGGGCTTATTCACTGGGAGGCCGGCCCTGCCCCTCCACAGTTCTaGACCCAAACCTGCCCTCAGCCATATGCCTCCCACTCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: RGLIHWEAGPAPPQF*TQTCPQPYASHSPA
Trigger: TGCAGGAGAGTGGGAGGCATATGGCTGAGGGCAGGTTTGGGTGCAGAACTGTGGAGGGGCAGGGCCGGCCTCCCAGTGAATAAGCCCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524662.1
ENST00000526474.1
CDS CCA 90 bp CATCTCCACCCACTTCATCTCCCGTTGGCGGATGAGGTCTGCAGGTaGGTGGCCCGGCCTGGGGGTGCATGGCACAGGTATCCAGACGCT +
Preference number: 5 (lower is better)
Translates to: HLHPLHLPLADEVCR*VARPGGAWHRYPDA
Trigger: AGCGTCTGGATACCTGTGCCATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS-3UTR CAA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCGGCCTCAAAGATGGCTaGGGCCCCGGCGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPGLKDG*GPGEAD
Trigger: GTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCC...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: VPICRAGISHQAIETGGHRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS CCA 90 bp GCGCAGGGCAGACGGGATGCCTTTCCGGCACTGCATCTTTACCTGTaGGTGAGGCCAAGGGCTCCACTAGGCAGCCTCCATAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AQGRRDAFPALHLYL*VRPRAPLGSLHSSC
Trigger: GCAGGAGCTATGGAGGCTGCCTAGTGGAGCCCTTGGCCTCACCCACAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp GTTTTCTCCCAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCTGGGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: VFSQCEVISTHFISR*RMRSAGGWPGLGVH
Trigger: ATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTGGGAGAAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS-3UTR CAA 90 bp ATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCACTGCCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: MLVPDPVCTTEDLLLPHCRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...GCAGTGGGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: AWSLPGRKPSPRVPRVKCRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...GCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCGAGGCACCTCAGGCTaGGCGCCTCGTCGCACTCCT +
Preference number: 5 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRRGTSG*APRRTP
Trigger: AGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCG...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp ACCACTCGGGCAGGTACAGCAGGGGTCCGACGCCCACCTGCTGCAGGTGCTTGTCCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TTRAGTAGVRRPPAAGACPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...ACAAGCACCTGCAGCAGGTGGGCGTCGGACCCCTGCTGTACCTGCCCGAGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529635.5
CDS-3UTR CAA 90 bp GTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGGACACGCCCTCTGGGGTCCCTaGACTCAGCCAACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: VPICRAGISHQAIETGGHALWGP*TQPTPS
Trigger: GGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGGC...GTGTCCCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS GCA 90 bp GTATCAAGGCAGAGTCCCAAAGACACAGGGAGTCCAGCTTGGCTCTaGTCCGACTCCCCTCCTGTTCTTGGCCTGGCCCCCAGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: VSRQSPKDTGSPAWL*SDSPPVLGLAPSLH
Trigger: GTGGAGGCTGGGGGCCAGGCCAAGAACAGGAGGGGAGTCGGAGCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTGCCTTGATAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLPLHLP*ADEVCR
Trigger: CCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGG...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCACGTCTCGTGCAGAGGGAATaGACGGTGCAGGTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: ALVLVRAWAPGRFHGSSRLVQRE*TVQVPA
Trigger: GGCAGGGACCTGCACCGTCAATTCCCTCTGCACGAG...ACGTGAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp CCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGGGCCTCAAAGATGGCTaGGGCCCCGGCGAGGCGGAC +
Preference number: 5 (lower is better)
Translates to: PGRKPSPRVPRVKCGAYLGLKDG*GPGEAD
Trigger: GTCCGCCTCGCCGGGGCCCAAGCCATCTTTGAGGCC...CAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp AATCCGAGGCACCTCAGGCTTGGCGCCTCGTCGCACTCCTGCCAGCTGCTGGGCTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 5 (lower is better)
Translates to: NPRHLRLGASSHSCQLLGSAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...GCCCAGCAGCTGGCAGGAGTGCGACGAGGCGCCAAGCCTGAGGTGCCTCGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS TCA 90 bp CGCCACCCATCCCCACCCCCGCCAGAATTGAAGGTCTCGATCACTTaGTTCCCAGCTGCAGATCCACGTCTGGAGCCAGTGAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: RHPSPPPPELKVSIT*FPAADPRLEPVSTQ
Trigger: CTGGGTGCTCACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGGGATGGGTGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 90 bp CCCACCCCCGCCAGAATTGAAGGTCTCGATCACTTGATTCCCAGCTaGAGATCCACGTCTGGAGCCAGTGAGCACCCAGCAGGTGCCTGC +
Preference number: 5 (lower is better)
Translates to: PTPARIEGLDHLIPS*RSTSGASEHPAGAC
Trigger: GCAGGCACCTGCTGGGTGCTCACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp ATGGCAGTATCAAGGCAGAGTCCCAAAGACACAGGGAGTCCAGCTTaGCTCTGCTCCGACTCCCCTCCTGTTCTTGGCCTGGCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: MAVSRQSPKDTGSPA*LCSDSPPVLGLAPS
Trigger: GCTGGGGGCCAGGCCAAGAACAGGAGGGGAGTCGGAGCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTGCCTTGATACTGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTCTCGTGCAGAGGGAATaGACGGTGCAGGTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGLVQRE*TVQVPA
Trigger: GGCAGGGACCTGCACCGTCAATTCCCTCTGCACGAG...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CAA 90 bp AGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCTCGTGCAGAGGGAATaGACGGTGCAGGTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: SPKSKVRCLFAGPASAIRLVQRE*TVQVPA
Trigger: GGCAGGGACCTGCACCGTCAATTCCCTCTGCACGAG...CCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp TCCTCCATGCTAGTGCCTGACCCAGTATGTACCACGGAGGACCTCCTCCTTCCCCTCGTGCAGAGGGAATaGACGGTGCAGGTCCCTGCC +
Preference number: 5 (lower is better)
Translates to: SSMLVPDPVCTTEDLLLPLVQRE*TVQVPA
Trigger: GGCAGGGACCTGCACCGTCAATTCCCTCTGCACGAG...GGGAAGGAGGAGGTCCTCCGTGGTACATACTGGGTCAGGCACTAGCATGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp AACCCCTTCCCTGACTCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCAAGTGCGGTGCCTATTaGCCGGGCCGGCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: NPFPDSFGAGFGTCEGLGKCGAY*PGRHQP
Trigger: TGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTT...GCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGAGTCAGGGAAGGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACTGGGGCCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: VRCLFAGPASAIRQLRLGPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...CCCCAGTCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp TCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCCCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPSPKSKVRCLFAGPASAPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...GGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGCCCTCTGGGGTCCCTaGACTCAGCCAACCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPALWGP*TQPTPS
Trigger: GGAAGGGGTTGGCTGAGTCAAGGGACCCCAGAGGGC...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS GCA 90 bp CCTGTGAGTCCTCCTCCTGCACAGAGCAGCCAGAAGGAGCTTAAATaGAGCCATCGCCCCTGCACTCCCCTGACACTCCCTGTCACATCC +
Preference number: 5 (lower is better)
Translates to: PVSPPPAQSSQKELK*SHRPCTPLTLPVTS
Trigger: GGATGTGACAGGGAGTGTCAGGGGAGTGCAGGGGCGATGGCTGCATTTAAGCTCCTTCTGGCTGCTCTGTGCAGGAGGAGGACTCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp CTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGGGTGTCCAGGAAGGAGGTCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LGDTKSMVLSEAGVQEGGPLHLP*ADEVCR
Trigger: CCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGG...ACCTCCTTCCTGGACACCCGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS-3UTR CAA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGAAGTGCGGTGCCTATTaGCCGGGCCGGCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPKCGAY*PGRHQP
Trigger: TGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTT...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS GCA 90 bp CCCAAACCTGCCCTCAGCCATATGCCTCCCACTCTCCTGCAGCTCTaGCCTCCCCGGTTCAGGAACAATGACAGAGGGTGGAGTTGCATT +
Preference number: 5 (lower is better)
Translates to: PKPALSHMPPTLLQL*PPRFRNNDRGWSCI
Trigger: AATGCAACTCCACCCTCTGTCATTGTTCCTGAACCGGGGAGGGCAGAGCTGCAGGAGAGTGGGAGGCATATGGCTGAGGGCAGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp GGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GRKPSPRVPRVKCGAYLPPLHLP*ADEVCR
Trigger: CCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGG...CGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGACTTGGCTTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp GCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGGGTCCTCTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 5 (lower is better)
Translates to: AGFGTCEGLGTRTVPWVLSAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...GAGGACCCATGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp TCCCCGAGTCCCAAGAGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 5 (lower is better)
Translates to: SPSPKSKVRCLFAGPASASAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...GGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACTCTTGGGACTCGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS-3UTR CAA 90 bp CCCCACTGCCTGGTCCTTGCCAGGAAGGAAGCCAAGTCCCCGAGTCCCAAGAGTTCAGCCATCAGGCAATaGAGACTGGGGGACACTAAG +
Preference number: 5 (lower is better)
Translates to: PHCLVLARKEAKSPSPKSSAIRQ*RLGDTK
Trigger: CTTAGTGTCCCCCAGTCTCAATTGCCTGATGGCTGA...ACTCTTGGGACTCGGGGACTTGGCTTCCTTCCTGGCAAGGACCAGGCAGTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS GCA 90 bp CAGCTCTGCCCTCCCCGGTTCAGGAACAATGACAGAGGGTGGAGTTaGATTTCGGGTAACACAGGCCGCTGTACTGGCCAAGTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: QLCPPRFRNNDRGWS*ISGNTGRCTGQVSL
Trigger: GAGGCTAACTTGGCCAGTACAGCGGCCTGTGTTACCCGAAATGCAACTCCACCCTCTGTCATTGTTCCTGAACCGGGGAGGGCAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp TCGAGGTCTAAGGCTGGTTGGAAGGTGACCGCATGGATAGCGACTTaGACACCTGTGGCCAGAACTCTAAGTCAGCCAGTGGTCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SRSKAGWKVTAWIAT*TPVARTLSQPVVLR
Trigger: GCGGAGGACCACTGGCTGACTTAGAGTTCTGGCCACAGGTGTCCAAGTCGCTATCCATGCGGTCACCTTCCAACCAGCCTTAGACCTCGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp CCAGCCCTGCTCTCGAGGTCTAAGGCTGGTTGGAAGGTGACCGCATaGATAGCGACTTGGACACCTGTGGCCAGAACTCTAAGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: PALLSRSKAGWKVTA*IATWTPVARTLSQP
Trigger: TGGCTGACTTAGAGTTCTGGCCACAGGTGTCCAAGTCGCTATCCATGCGGTCACCTTCCAACCAGCCTTAGACCTCGAGAGCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp CTCCTGCAGCTCTGCCCTCCCCGGTTCAGGAACAATGACAGAGGGTaGAGTTGCATTTCGGGTAACACAGGCCGCTGTACTGGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: LLQLCPPRFRNNDRG*SCISGNTGRCTGQV
Trigger: AACTTGGCCAGTACAGCGGCCTGTGTTACCCGAAATGCAACTCCACCCTCTGTCATTGTTCCTGAACCGGGGAGGGCAGAGCTGCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp GCCATCAGGCAATTGAGACTGGGGGACACTAAGTCCATGGTCCTCTCAGAAGCGCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: AIRQLRLGDTKSMVLSEAPLHLP*ADEVCR
Trigger: CCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGG...CGCTTCTGAGAGGACCATGGACTTAGTGTCCCCCAGTCTCAATTGCCTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
CDS CCA 90 bp GGGTTGGGAGTGTCCCAAAGTTCAAGTCCTGGGTTTCTGGGTCTTTaGGGTTGGGGTCGCAGTCCCCAAGTTCAGAATCAGGAGTCGTGG +
Preference number: 5 (lower is better)
Translates to: GLGVSQSSSPGFLGL*GWGRSPQVQNQESW
Trigger: CCACGACTCCTGATTCTGAACTTGGGGACTGCGACCCCAACCCCAAAGACCCAGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS-3UTR CAA 90 bp AGTAAAGTGCGGTGCCTATTTGCCGGGCCGGCATCAGCCATCAGGCAATTGAGACCTTTGGTGCTGGCTTaGGTACTTGTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SKVRCLFAGPASAIRQLRPLVLA*VLVRAW
Trigger: CCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGG...TCTCAATTGCCTGATGGCTGATGCCGGCCCGGCAAATAGGCACCGCACTTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS GCA 90 bp TGCATCTTTACCTTCTTGTACCGCCGGGACATGGTTTTCTCCCAGTaGGAGGTCATCTCCACCCACTTCATCTCCCGTTGGCGGATGAGG +
Preference number: 5 (lower is better)
Translates to: CIFTFLYRRDMVFSQ*EVISTHFISRWRMR
Trigger: CCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACAAGAAGGTAAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529132.1
ENST00000529635.5
ENST00000530967.6
ENST00000533745.5
ENST00000542590.2
CDS-3UTR CAA 90 bp TCCTTTGGTGCTGGCTTTGGTACTTGTGAGGGCCTGGGCACCAGGACGGTTCCATGCATCTTTACCTTCTaGTACCGCCGGGACATGGTT +
Preference number: 5 (lower is better)
Translates to: SFGAGFGTCEGLGTRTVPCIFTF*YRRDMV
Trigger: AACCATGTCCCGGCGGTACAAGAAGGTAAAGATGCA...TGGAACCGTCCTGGTGCCCAGGCCCTCACAAGTACCAAAGCCAGCACCAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000542590.2
CDS CCA 90 bp AGGGCTCATGGTGTTAGATTTGAAGGTCACAGGGTTGGGGTTCACTaGCCAAGGGTTGGGAGTGTCCCAAAGTTCAAGTCCTGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: RAHGVRFEGHRVGVH*PRVGSVPKFKSWVS
Trigger: AGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 90 bp AAAGGTCAGGTGGAGCCCTTTAAGGGCCTTTCCAACTTGGATCTGTaGCCCTCTGATTCTAGAAAGATCCTAGGCAGAACTGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: KGQVEPFKGLSNLDL*PSDSRKILGRTALP
Trigger: GGGAAGAGCAGTTCTGCCTAGGATCTTTCTAGAATCAGAGGGTCACAGATCCAAGTTGGAAAGGCCCTTAAAGGGCTCCACCTGACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 90 bp AACACAGGCCGCTGTACTGGCCAAGTTAGCCTCAAGAGCCACAGATaGTTTGGGGAAGAGTTACTATCTTGTGAATTTGGTTACTGTCGC +
Preference number: 5 (lower is better)
Translates to: NTGRCTGQVSLKSHR*FGEELLSCEFGYCR
Trigger: GCGACAGTAACCAAATTCACAAGATAGTAACTCTTCCCCAAAGCATCTGTGGCTCTTGAGGCTAACTTGGCCAGTACAGCGGCCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 90 bp TTTAAGGTGCAACCTCCAGACCTCACATATAGAACAGAATGCAGGTaGGTTACCGATGGCAGTATCAAGGCAGAGTCCCAAAGACACAGG +
Preference number: 5 (lower is better)
Translates to: FKVQPPDLTYRTECR*VTDGSIKAESQRHR
Trigger: CCTGTGTCTTTGGGACTCTGCCTTGATACTGCCATCGGTAACCCACCTGCATTCTGTTCTATATGTGAGGTCTGGAGGTTGCACCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 90 bp GAGCACACGACAGGCATTCAGTATGCACAGTATGCATATGCTGACTaGTTTCTACCACGTTTTAAGGTGCAACCTCCAGACCTCACATAT +
Preference number: 5 (lower is better)
Translates to: EHTTGIQYAQYAYAD*FLPRFKVQPPDLTY
Trigger: ATATGTGAGGTCTGGAGGTTGCACCTTAAAACGTGGTAGAAATCAGTCAGCATATGCATACTGTGCATACTGAATGCCTGTCGTGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 90 bp ATGCACAGTATGCATATGCTGACTGATTTCTACCACGTTTTAAGGTaGAACCTCCAGACCTCACATATAGAACAGAATGCAGGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: MHSMHMLTDFYHVLR*NLQTSHIEQNAGGL
Trigger: TAACCCACCTGCATTCTGTTCTATATGTGAGGTCTGGAGGTTGCACCTTAAAACGTGGTAGAAATCAGTCAGCATATGCATACTGTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 72 bp TGTGCACGTGCGGAAGCAGCCGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCCGCACAGCCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: CARAEAAAAAGP*TPRRPAAQPPV
Trigger: CACAGGAGGCTGTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526474.1
ENST00000530967.6
CDS TCA 72 bp TGTGCACGTGCGGAAGCAGCCGCCGCAGCAGGGCCATaGACACCTCGGCGTCCAGCCGCACAGCCTCCATGT +
Preference number: 6 (lower is better)
Translates to: CARAEAAAAAGP*TPRRPAAQPPC
Trigger: ACATGGAGGCTGTGCGGCTGGACGCCGAGGTGTTCATGGCCCTGCTGCGGCGGCTGCTTCCGCACGTGCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542590.2
CDS CCA 72 bp CCCAGGCACAGCTCATCAGCAGGCAGGGGCCCACTTTaGGTGGCAGGGAGCAAAGGCCGGAGGTGCTGGGAC +
Preference number: 6 (lower is better)
Translates to: PRHSSSAGRGPL*VAGSKGRRCWD
Trigger: GTCCCAGCACCTCCGGCCTTTGCTCCCTGCCACCCAAAGTGGGCCCCTGCCTGCTGATGAGCTGTGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 72 bp GTCGGCCTGGCGATATGGGCCAGGCCCGCTGAGCTCTaGGTCGGACCCCAAGGAGCTGGAGTCATCCTGCAG +
Preference number: 6 (lower is better)
Translates to: VGLAIWARPAEL*VGPQGAGVILQ
Trigger: CTGCAGGATGACTCCAGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCTGGCCCATATCGCCAGGCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS TCA 72 bp AGGTCATCTCCACCCACTTCATCTCCCGTTGGCGGATaGGGTCTGCAGGTGGGTGGCCCGGCCTGGGGGTGC +
Preference number: 6 (lower is better)
Translates to: RSSPPTSSPVGG*GLQVGGPAWGC
Trigger: GCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS GCA 72 bp AGCTCTGAGTCGGACCCCAAGGAGCTGGAGTCATCCTaGAGCTCGGGAGGCTGCACCAGGTCCTCCCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSESDPKELESS*SSGGCTRSSPR
Trigger: CCTGGGGGAGGACCTGGTGCAGCCTCCCGAGCTGCAGGATGACTCCAGCTCCTTGGGGTCCGACTCAGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS GCA 72 bp CAGTGTCAGCCCCACACGGAACAGTACTCTGGCACCTaGAGGCCGGGGGCTTATTCACTGGGAGGCCGGCCC +
Preference number: 6 (lower is better)
Translates to: QCQPHTEQYSGT*RPGAYSLGGRP
Trigger: GGGCCGGCCTCCCAGTGAATAAGCCCCCGGCCTGCAGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524662.1
ENST00000526474.1
CDS CCA 72 bp AGTACTCTGGCACCTGCAGGCCGGGGGCTTATTCACTaGGAGGCCGGCCCTGCCCCTCCACAGTTCTGCACC +
Preference number: 6 (lower is better)
Translates to: STLAPAGRGLIH*EAGPAPPQFCT
Trigger: GGTGCAGAACTGTGGAGGGGCAGGGCCGGCCTCCCAGTGAATAAGCCCCCGGCCTGCAGGTGCCAGAGTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524662.1
ENST00000526474.1
CDS CCA 72 bp CCGGCCTGGGGGTGCATGGCACAGGTATCCAGACGCTaGGCAGCTGTTACCCAAGGCCCACACTGCCACCCT +
Preference number: 6 (lower is better)
Translates to: PAWGCMAQVSRR*AAVTQGPHCHP
Trigger: AGGGTGGCAGTGTGGGCCTTGGGTAACAGCTGCCCAGCGTCTGGATACCTGTGCCATGCACCCCCAGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533745.5
CDS CAA 72 bp CCAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCC +
Preference number: 6 (lower is better)
Translates to: PVRGHLHPLHLP*ADEVCRWVARP
Trigger: GGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS TCA 72 bp CATAGCGGTCGGCCTGGCGATATGGGCCAGGCCCGCTaGGCTCTGAGTCGGACCCCAAGGAGCTGGAGTCAT +
Preference number: 6 (lower is better)
Translates to: HSGRPGDMGQAR*ALSRTPRSWSH
Trigger: ATGACTCCAGCTCCTTGGGGTCCGACTCAGAGCTCAGCGGGCCTGGCCCATATCGCCAGGCCGACCGCTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS TCA 72 bp CTTGATTCCCAGCTGCAGATCCACGTCTGGAGCCAGTaGGCACCCAGCAGGTGCCTGCGGGCTCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: LDSQLQIHVWSQ*APSRCLRALGR
Trigger: CCTCCCCAGAGCCCGCAGGCACCTGCTGGGTGCTCACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp ACAGGGGCCAGCATCGGGCGCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCTTTACCTGTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: TGASIGRAGQTG*LSGTASLPVGE
Trigger: CTCACCCACAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp CAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCCT +
Preference number: 6 (lower is better)
Translates to: QCEVISTHFISR*RMRSAGGWPGP
Trigger: AGGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529635.5
ENST00000530967.6
ENST00000542590.2
CDS CCA 72 bp GGCGCACCAGTGTCAGCCCCACACGGAACAGTACTCTaGCACCTGCAGGCCGGGGGCTTATTCACTGGGAGG +
Preference number: 6 (lower is better)
Translates to: GAPVSAPHGTVL*HLQAGGLFTGR
Trigger: CCTCCCAGTGAATAAGCCCCCGGCCTGCAGGTGCCAGAGTACTGTTCCGTGTGGGGCTGACACTGGTGCGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524662.1
ENST00000526474.1
CDS CCA 72 bp TTCATCTCCCGTTGGCGGATGAGGTCTGCAGGTGGGTaGCCCGGCCTGGGGGTGCATGGCACAGGTATCCAG +
Preference number: 6 (lower is better)
Translates to: FISRWRMRSAGG*PGLGVHGTGIQ
Trigger: CTGGATACCTGTGCCATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS CCA 72 bp CCACTTCATCTCCCGTTGGCGGATGAGGTCTGCAGGTaGGTGGCCCGGCCTGGGGGTGCATGGCACAGGTAT +
Preference number: 6 (lower is better)
Translates to: PLHLPLADEVCR*VARPGGAWHRY
Trigger: ATACCTGTGCCATGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS CCA 72 bp CAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTTaGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCTG +
Preference number: 6 (lower is better)
Translates to: QCEVISTHFISR*RMRSAGGWPGL
Trigger: CAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS CCA 72 bp ACCCAGGTGAACCCAGCTCCTGGCCCTAGGGATCTCTaGGAGCCCTGTGGGGTGACCTGTGACCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: TQVNPAPGPRDL*EPCGVTCDPGA
Trigger: AGCTCCTGGGTCACAGGTCACCCCACAGGGCTCCCAGAGATCCCTAGGGCCAGGAGCTGGGTTCACCTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533745.5
CDS CAA 72 bp CCAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: PVRGHLHPLHLP*ADEVCRWVARP
Trigger: AGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS CAA 90 bp GGTTTTCTCCCAGTGCGAGGTCATCTCCACCCACTTCATCTCCCGTaGGCGGATGAGGTCTGCAGGTGGGTGGCCCGGCCTGGGGGTGCA +
Preference number: 6 (lower is better)
Translates to: GFLPVRGHLHPLHLP*ADEVCRWVARPGGA
Trigger: TGCACCCCCAGGCCGGGCCACCCACCTGCAGACCTCATCCGCCAACGGGAGATGAAGTGGGTGGAGATGACCTCGCACTGGGAGAAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529132.1
ENST00000533745.5
CDS GCA 72 bp CAGAGTCCCAAAGACACAGGGAGTCCAGCTTGGCTCTaGTCCGACTCCCCTCCTGTTCTTGGCCTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: QSPKDTGSPAWL*SDSPPVLGLAP
Trigger: GGGGGCCAGGCCAAGAACAGGAGGGGAGTCGGAGCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp CCCAAGGCTCCAGTCCCCTCCAAGCCACCAGCTTCCTaGCAGGAGCCCAGGGCTACTGATGCCTTCACACCA +
Preference number: 6 (lower is better)
Translates to: PKAPVPSKPPAS*QEPRATDAFTP
Trigger: TGGTGTGAAGGCATCAGTAGCCCTGGGCTCCTGGCAGGAAGCTGGTGGCTTGGAGGGGACTGGAGCCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp ACAGGGGCCAGCATCGGGCGCGCAGGGCAGACGGGATaGCTTTCCGGCACTGCATCTTTACCTTCTTGTACC +
Preference number: 6 (lower is better)
Translates to: TGASIGRAGQTG*LSGTASLPSCT
Trigger: GGTACAAGAAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCTGCCCTGCGCGCCCGATGCTGGCCCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529132.1
ENST00000529635.5
ENST00000530967.6
ENST00000533745.5
ENST00000542590.2
CDS CAA 90 bp GATGGCAGTATCAAGGCAGAGTCCCAAAGACACAGGGAGTCCAGCTaGGCTCTGCTCCGACTCCCCTCCTGTTCTTGGCCTGGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: DGSIKAESQRHRESS*ALLRLPSCSWPGPQ
Trigger: CTGGGGGCCAGGCCAAGAACAGGAGGGGAGTCGGAGCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTGCCTTGATACTGCCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp CCTCCTCCTGCACAGAGCAGCCAGAAGGAGCTTAAATaGAGCCATCGCCCCTGCACTCCCCTGACACTCCCT +
Preference number: 6 (lower is better)
Translates to: PPPAQSSQKELK*SHRPCTPLTLP
Trigger: AGGGAGTGTCAGGGGAGTGCAGGGGCGATGGCTGCATTTAAGCTCCTTCTGGCTGCTCTGTGCAGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp TCGCCACCCATCCCCACCCCCGCCAGAATTGAAGGTCTCGATCACTaGATTCCCAGCTGCAGATCCACGTCTGGAGCCAGTGAGCACCCA +
Preference number: 6 (lower is better)
Translates to: SPPIPTPARIEGLDH*IPSCRSTSGASEHP
Trigger: TGGGTGCTCACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGGGATGGGTGGCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp AGACGGGATGCCTTTCCGGCACTGCATCTTTACCTGTaGGTGAGGCCAAGGGCTCCACTAGGCAGCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RRDAFPALHLYL*VRPRAPLGSLH
Trigger: ATGGAGGCTGCCTAGTGGAGCCCTTGGCCTCACCCACAGGTAAAGATGCAGTGCCGGAAAGGCATCCCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp CTCTGCCCAGCCCTGCTCTCGAGGTCTAAGGCTGGTTaGAAGGTGACCGCATGGATAGCGACTTGGACACCT +
Preference number: 6 (lower is better)
Translates to: LCPALLSRSKAG*KVTAWIATWTP
Trigger: AGGTGTCCAAGTCGCTATCCATGCGGTCACCTTCCAACCAGCCTTAGACCTCGAGAGCAGGGCTGGGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp GTCATGAGGACCTGGGTCACTAGGACAGGGTCCAGGAATCAAGGATaGCAGGTTTCTGAGGCCACAGTTCCTGGGGATGGGGTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: VMRTWVTRTGSRNQG*QVSEATVPGDGVPW
Trigger: CCAGGGAACCCCATCCCCAGGAACTGTGGCCTCAGAAACCTGCAATCCTTGATTCCTGGACCCTGTCCTAGTGACCCAGGTCCTCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 72 bp TCCCCACCCCCGCCAGAATTGAAGGTCTCGATCACTTaGTTCCCAGCTGCAGATCCACGTCTGGAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: SPPPPELKVSIT*FPAADPRLEPV
Trigger: CACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp TGGCCAAGGGTTGGGAGTGTCCCAAAGTTCAAGTCCTaGGTTTCTGGGTCTTTGGGGTTGGGGTCGCAGTCC +
Preference number: 6 (lower is better)
Translates to: WPRVGSVPKFKS*VSGSLGLGSQS
Trigger: GGACTGCGACCCCAACCCCAAAGACCCAGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCCTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp ATCAAGGCAGAGTCCCAAAGACACAGGGAGTCCAGCTaGGCTCTGCTCCGACTCCCCTCCTGTTCTTGGCCT +
Preference number: 6 (lower is better)
Translates to: IKAESQRHRESS*ALLRLPSCSWP
Trigger: AGGCCAAGAACAGGAGGGGAGTCGGAGCAGAGCCAAGCTGGACTCCCTGTGTCTTTGGGACTCTGCCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp CTCTGCCCTCCCCGGTTCAGGAACAATGACAGAGGGTaGAGTTGCATTTCGGGTAACACAGGCCGCTGTACT +
Preference number: 6 (lower is better)
Translates to: LCPPRFRNNDRG*SCISGNTGRCT
Trigger: AGTACAGCGGCCTGTGTTACCCGAAATGCAACTCCACCCTCTGTCATTGTTCCTGAACCGGGGAGGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp ATCCCCACCCCCGCCAGAATTGAAGGTCTCGATCACTaGATTCCCAGCTGCAGATCCACGTCTGGAGCCAGT +
Preference number: 6 (lower is better)
Translates to: IPTPARIEGLDH*IPSCRSTSGAS
Trigger: ACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGCGGGGGTGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp GCCAGAATTGAAGGTCTCGATCACTTGATTCCCAGCTaGAGATCCACGTCTGGAGCCAGTGAGCACCCAGCA +
Preference number: 6 (lower is better)
Translates to: ARIEGLDHLIPS*RSTSGASEHPA
Trigger: TGCTGGGTGCTCACTGGCTCCAGACGTGGATCTGCAGCTGGGAATCAAGTGATCGAGACCTTCAATTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp GGCACTGCATCTTTACCTTCTTGTACCGCCGGGACATaGTTTTCTCCCAGTGCGAGGTCATCTCCACCCACT +
Preference number: 6 (lower is better)
Translates to: GTASLPSCTAGT*FSPSARSSPPT
Trigger: AGTGGGTGGAGATGACCTCGCACTGGGAGAAAACCATGTCCCGGCGGTACAAGAAGGTAAAGATGCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000312390.9
ENST00000526387.5
ENST00000529132.1
ENST00000529635.5
ENST00000530967.6
ENST00000533745.5
ENST00000542590.2
CDS CCA 72 bp GGGGTCAAGGTGATAACATCCAGATTCCTAGATGACTaGGGTCAAGGCTGGGGTCAAGGGTCCCAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: GVKVITSRFLDD*GQGWGQGSQVP
Trigger: AGGAACCTGGGACCCTTGACCCCAGCCTTGACCCCAGTCATCTAGGAATCTGGATGTTATCACCTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp AAGGCTGGTTGGAAGGTGACCGCATGGATAGCGACTTaGACACCTGTGGCCAGAACTCTAAGTCAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: KAGWKVTAWIAT*TPVARTLSQPV
Trigger: CACTGGCTGACTTAGAGTTCTGGCCACAGGTGTCCAAGTCGCTATCCATGCGGTCACCTTCCAACCAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp CTCTCGAGGTCTAAGGCTGGTTGGAAGGTGACCGCATaGATAGCGACTTGGACACCTGTGGCCAGAACTCTA +
Preference number: 6 (lower is better)
Translates to: LSRSKAGWKVTA*IATWTPVARTL
Trigger: TAGAGTTCTGGCCACAGGTGTCCAAGTCGCTATCCATGCGGTCACCTTCCAACCAGCCTTAGACCTCGAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp GTGTCCCAAAGTTCAAGTCCTGGGTTTCTGGGTCTTTaGGGTTGGGGTCGCAGTCCCCAAGTTCAGAATCAG +
Preference number: 6 (lower is better)
Translates to: VSQSSSPGFLGL*GWGRSPQVQNQ
Trigger: CTGATTCTGAACTTGGGGACTGCGACCCCAACCCCAAAGACCCAGAAACCCAGGACTTGAACTTTGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp TTGAAGGTCACAGGGTTGGGGTTCACTGGCCAAGGGTaGGGAGTGTCCCAAAGTTCAAGTCCTGGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: LKVTGLGFTGQG*GVSQSSSPGFL
Trigger: CAGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp ACAGGGCTCATGGTGTTAGATTTGAAGGTCACAGGGTaGGGGTTCACTGGCCAAGGGTTGGGAGTGTCCCAA +
Preference number: 6 (lower is better)
Translates to: TGLMVLDLKVTG*GFTGQGLGVSQ
Trigger: TTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp GAGGGGTTTAGGGTGTTGGAAATCACAGGGCTCATGGTGTTAGATTaGAAGGTCACAGGGTTGGGGTTCACTGGCCAAGGGTTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: EGFRVLEITGLMVLD*KVTGLGFTGQGLGV
Trigger: CACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCTGTGATTTCCAACACCCTAAACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp GGTGTTAGATTTGAAGGTCACAGGGTTGGGGTTCACTaGCCAAGGGTTGGGAGTGTCCCAAAGTTCAAGTCC +
Preference number: 6 (lower is better)
Translates to: GVRFEGHRVGVH*PRVGSVPKFKS
Trigger: GGACTTGAACTTTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp AGGGTGTTGGAAATCACAGGGCTCATGGTGTTAGATTaGAAGGTCACAGGGTTGGGGTTCACTGGCCAAGGG +
Preference number: 6 (lower is better)
Translates to: RVLEITGLMVLD*KVTGLGFTGQG
Trigger: CCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCTGTGATTTCCAACACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp GTGTTAGATTTGAAGGTCACAGGGTTGGGGTTCACTGGCCAAGGGTaGGGAGTGTCCCAAAGTTCAAGTCCTGGGTTTCTGGGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: VLDLKVTGLGFTGQG*GVSQSSSPGFLGLW
Trigger: CCAAAGACCCAGAAACCCAGGACTTGAACTTTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp CAGGCCGCTGTACTGGCCAAGTTAGCCTCAAGAGCCACAGATGCTTaGGGGAAGAGTTACTATCTTGTGAATTTGGTTACTGTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: QAAVLAKLASRATDA*GKSYYLVNLVTVAS
Trigger: GGAGGCGACAGTAACCAAATTCACAAGATAGTAACTCTTCCCCAAAGCATCTGTGGCTCTTGAGGCTAACTTGGCCAGTACAGCGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 90 bp TTGGAAATCACAGGGCTCATGGTGTTAGATTTGAAGGTCACAGGGTaGGGGTTCACTGGCCAAGGGTTGGGAGTGTCCCAAAGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: LEITGLMVLDLKVTG*GFTGQGLGVSQSSS
Trigger: ACTTGAACTTTGGGACACTCCCAACCCTTGGCCAGTGAACCCCAACCCTGTGACCTTCAAATCTAACACCATGAGCCCTGTGATTTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CCA 72 bp CAACCTCCAGACCTCACATATAGAACAGAATGCAGGTaGGTTACCGATGGCAGTATCAAGGCAGAGTCCCAA +
Preference number: 6 (lower is better)
Translates to: QPPDLTYRTECR*VTDGSIKAESQ
Trigger: TTGGGACTCTGCCTTGATACTGCCATCGGTAACCCACCTGCATTCTGTTCTATATGTGAGGTCTGGAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp ATGACACTTCTGACAATCTATAAATATCTTGTGAATTaGGTTACTGTCGCCACCCATCCCCACCCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: MTLLTIYKYLVN*VTVATHPHPRQ
Trigger: CTGGCGGGGGTGGGGATGGGTGGCGACAGTAACCAAATTCACAAGATATTTATAGATTGTCAGAAGTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS TCA 72 bp ACAGGCATTCAGTATGCACAGTATGCATATGCTGACTaGTTTCTACCACGTTTTAAGGTGCAACCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: TGIQYAQYAYAD*FLPRFKVQPPD
Trigger: GTCTGGAGGTTGCACCTTAAAACGTGGTAGAAATCAGTCAGCATATGCATACTGTGCATACTGAATGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS CAA 72 bp GTACTGGCCAAGTTAGCCTCAAGAGCCACAGATGCTTaGGGGAAGAGTTACTATCTTGTGAATTTGGTTACT +
Preference number: 6 (lower is better)
Translates to: VLAKLASRATDA*GKSYYLVNLVT
Trigger: AGTAACCAAATTCACAAGATAGTAACTCTTCCCCAAAGCATCTGTGGCTCTTGAGGCTAACTTGGCCAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1
CDS GCA 72 bp ATGCATATGCTGACTGATTTCTACCACGTTTTAAGGTaGAACCTCCAGACCTCACATATAGAACAGAATGCA +
Preference number: 6 (lower is better)
Translates to: MHMLTDFYHVLR*NLQTSHIEQNA
Trigger: TGCATTCTGTTCTATATGTGAGGTCTGGAGGTTGCACCTTAAAACGTGGTAGAAATCAGTCAGCATATGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526474.1