RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TBC1D1 (Homo sapiens)

Ensembl gene IDs: ENSG00000065882

Ensembl transcript IDs: ENST00000261439.9, ENST00000401554.5, ENST00000402522.1, ENST00000405444.3, ENST00000406664.5, ENST00000407365.5, ENST00000421339.3, ENST00000443855.5, ENST00000446803.6, ENST00000469803.1, ENST00000475531.1, ENST00000491553.1, ENST00000492180.1, ENST00000508802.5, ENST00000509761.1, ENST00000510573.6, ENST00000511238.5, ENST00000513936.6, ENST00000615497.4

Found 761 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAACAGGAGGAAGTCTCGAATGCCAGCCACCTGTTTAGGCACTGGTaGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACA +
Preference number: 1 (lower is better)
Translates to: EQEEVSNASHLFRHW*QHCGLLVKWPGRLT
Trigger: TGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCTGGCATTCGAGACTTCCTCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR TCA 90 bp CATAACAAGAATGGGCGAGAGCCAACTGCACCTTGCCAGGGACGCTaGGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGAC +
Preference number: 1 (lower is better)
Translates to: HNKNGREPTAPCQGR*GCSRHTNPLGRTMD
Trigger: GTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGCGTCCCTGGCAAGGTGCAGTTGGCTCTCGCCCATTCTTGTTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 90 bp GGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTaGTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: GLAASFTLLTLVVHC*FPGRAFFLTFSGSS
Trigger: AGAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR CCA 90 bp CACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATaGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCTCTCCT +
Preference number: 1 (lower is better)
Translates to: HLFRHWWQHCGLLVK*PGRLTVSLSMAISP
Trigger: AGGAGAGATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 90 bp AGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAGCTCTTCCAGCTTTTGAAATTCCAC +
Preference number: 1 (lower is better)
Translates to: SRHTNPLGRTMDPRL*LRHDLELFQLLKFH
Trigger: GTGGAATTTCAAAAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR TCA 90 bp ATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGCAGGACAACCGTaGGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATCCTG +
Preference number: 1 (lower is better)
Translates to: IREALHSDWLQAGQP*AAFCLLKAQVLVIL
Trigger: CAGGATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTaGACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGCAGGAC +
Preference number: 1 (lower is better)
Translates to: TAQNPIFVRKQPTLK*TSERLYTVTGCKQD
Trigger: GTCCTGCTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR TCA 90 bp GAAAGCAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTaGCTGGCTGCAAGCAGGACAACCGTGAGCAGCATTTTGCTTGTT +
Preference number: 1 (lower is better)
Translates to: ESNPLLSAHQRGFTQ*LAASRTTVSSILLV
Trigger: AACAAGCAAAATGCTGCTCACGGTTGTCCTGCTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR TCA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 2 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR CAA 90 bp AGGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTaGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: RPCSKLHVADTGGSL*LSRQGFLPHLLRQL
Trigger: GAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR TCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 2 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLSRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR CAA 90 bp GCTGCTGGGTTCATCATGACTGCAGGCCTTGCAGCAAGCTTCACGTaGCTGACACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: AAGFIMTAGLAASFT*LTLVVHCCFPGRAF
Trigger: GAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR TCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 2 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAISRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR GCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAG +
Preference number: 2 (lower is better)
Translates to: LKAQVLVILREESHCVRPMDPRL*LRHDLE
Trigger: CTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCAT...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR TCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCACCTTGCCAGGGACGCTaGGGGTGTAGTCGCCACACA +
Preference number: 2 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSPCQGR*GCSRHT
Trigger: TGTGTGGCGACTACACCCTCAGCGTCCCTGGCAAGG...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR GCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCTACACAGTGACTGGCTaGAAGCAGGACAACCGTGAG +
Preference number: 2 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAIYTVTG*KQDNRE
Trigger: CTCACGGTTGTCCTGCTTGCAGCCAGTCACTGTGTA...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 2 (lower is better)
Translates to: LKAQVLVILREESHCVRPKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR TCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCGTGTTGTCAAGGAAGTaGCCTGTGACTGCACAGAAC +
Preference number: 2 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAIVLSRK*PVTAQN
Trigger: GTTCTGTGCAGTCACAGGTCACTTCCTTGACAACAC...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 2 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR GCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGTCAAAGGAACATGATTaGATTACATCACACAACAGG +
Preference number: 2 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPSKEHD*ITSHNR
Trigger: CCTGTTGTGTGATGTAATGCAATCATGTTCCTTTGA...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTACAGTAATCAGGACTaGAGAAGGGACGATTTAGTA +
Preference number: 2 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLYSNQD*RRDDLV
Trigger: TACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 2 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQSRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR TCA 90 bp CTGAGGATAATGGTTTCCAGCTCCATCCATGTTCCTAGAAAGGACGTGATCTCGCTAAAATCTAGCCTGTaGTTTCCGCACAGACTCAGC +
Preference number: 2 (lower is better)
Translates to: LRIMVSSSIHVPRKDVISLKSSL*FPHRLS
Trigger: GCTGAGTCTGTGCGGAAATCACAGGCTAGATTTTAG...CGAGATCACGTCCTTTCTAGGAACATGGATGGAGCTGGAAACCATTATCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR TCA 90 bp GTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTTCCAGCTCCATCCATCTGCTGGGTTCATCATaGCTGCAGGCCTTGCAGCAA +
Preference number: 2 (lower is better)
Translates to: VFSSFVSLLRIMVSSSIHLLGSS*LQALQQ
Trigger: TTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAG...ATGGATGGAGCTGGAAACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR TCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 2 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR GCA 90 bp GTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTTCCAGCTCCATCCATCTGGTGGTTCACTGTTaGTTTCCAGGCAGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: VFSSFVSLLRIMVSSSIHLVVHC*FPGRAF
Trigger: GAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAG...ATGGATGGAGCTGGAAACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR TCA 90 bp TATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGACAAGCTTCACGTTGCTaGCACTGGTGGTTCACTGTT +
Preference number: 2 (lower is better)
Translates to: YSISDLAQDYQPFPQVNRQASRC*HWWFTV
Trigger: AACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTG...TCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR GCA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR GCA 90 bp TTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACCATGACTGCAGGCCTTaGAGCAAGCTTCACGTTGCT +
Preference number: 2 (lower is better)
Translates to: LYSISDLAQDYQPFPQVNHDCRP*SKLHVA
Trigger: AGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATG...GTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACACATGCCCCCTGAATTaGAAGTTGGAGTTCGTAAGA +
Preference number: 2 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNTCPLN*KLEFVR
Trigger: TCTTACGAACTCCAACTTGCAATTCAGGGGGCATGT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR CCA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATACTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTT +
Preference number: 2 (lower is better)
Translates to: CPIKHLPTMTLINCTYGILSVKA*TVWDGV
Trigger: AACACCATCCCACACTGTCCAGGCCTTAACTGAGAG...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CCA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATATACAGTAATCAGGACTaGAGAAGGGACGATTTAGTA +
Preference number: 2 (lower is better)
Translates to: CPIKHLPTMTLINCTYGIYSNQD*RRDDLV
Trigger: TACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTA...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR TCA 72 bp AATGGGCGAGAGCCAACTGCACCTTGCCAGGGACGCTaGGGGTGTAGTCGCCACACAAACCCTCTCGGAAGA +
Preference number: 3 (lower is better)
Translates to: NGREPTAPCQGR*GCSRHTNPLGR
Trigger: TCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGCGTCCCTGGCAAGGTGCAGTTGGCTCTCGCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR CCA 72 bp GAGGAAGTCTCGAATGCCAGCCACCTGTTTAGGCACTaGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCG +
Preference number: 3 (lower is better)
Translates to: EEVSNASHLFRH*WQHCGLLVKWP
Trigger: CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCTGGCATTCGAGACTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGTTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAIQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 72 bp ACAAACCCTCTCGGAAGAACGATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAGCTCTTCCAGCTTTTG +
Preference number: 3 (lower is better)
Translates to: TNPLGRTMDPRL*LRHDLELFQLL
Trigger: CAAAAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 72 bp GCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTaGTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: ASFTLLTLVVHC*FPGRAFFLTFS
Trigger: GGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR CCA 72 bp TCCTTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: SFQRLLSLSVKA*TVWDGVAISPA
Trigger: TGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR CAA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTGACATGCCCCCTGAATaGCAAGTTGGAGTTCGTAAG +
Preference number: 3 (lower is better)
Translates to: LKAQVLVILREESHCVRPDMPPE*QVGVRK
Trigger: CTTACGAACTCCAACTTGCAATTCAGGGGGCATGTC...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp TGGGATGAACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCCTTGCAGCAAGCACTGGTGGTTCACTGTaGCTTTCCAGGCAGGGCTTT +
Preference number: 3 (lower is better)
Translates to: WDELEAAGFIMTAGLAASTGGSL*LSRQGF
Trigger: AAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGT...GCTTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAGCTTCTAGTTCATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR GCA 72 bp ACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCCTTaGAGCAAGCTTCACGTTGCTGACACTGGTGGTTCA +
Preference number: 3 (lower is better)
Translates to: TRSCWVHHDCRP*SKLHVADTGGS
Trigger: TGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAGCTTCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR-3UTR CAA 90 bp CTGAGGATAATGGTTTCCAGCTCCATCCATGTTCCTAGAAAGGACGTGATCTCGGCAGCAAGCTTCACGTaGCTGACACTGGTGGTTCAC +
Preference number: 3 (lower is better)
Translates to: LRIMVSSSIHVPRKDVISAASFT*LTLVVH
Trigger: GTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGC...CGAGATCACGTCCTTTCTAGGAACATGGATGGAGCTGGAAACCATTATCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR TCA 72 bp CCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTaGCTGGCTGCAAGCAGGACAACCGTGAGCAGCATT +
Preference number: 3 (lower is better)
Translates to: PLLSAHQRGFTQ*LAASRTTVSSI
Trigger: AATGCTGCTCACGGTTGTCCTGCTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR TCA 72 bp CTCAGCGAAGATCACAACAAAACTTCCAAGCGCGTGTaGAGTCACAGGATAAATAGTCTCAGGGCCACTGGG +
Preference number: 3 (lower is better)
Translates to: LSEDHNKTSKRV*SHRINSLRATG
Trigger: CCCAGTGGCCCTGAGACTATTTATCCTGTGACTTCACACGCGCTTGGAAGTTTTGTTGTGATCTTCGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
3UTR GCA 72 bp TCCCAGACTCTTGGGGCACCCCTGAATATCTTGATGTaGCTACTCCTTCTGCAAGAAGTCAGATTTCCAAGG +
Preference number: 3 (lower is better)
Translates to: SQTLGAPLNILM*LLLLQEVRFPR
Trigger: CCTTGGAAATCTGACTTCTTGCAGAAGGAGTAGGCACATCAAGATATTCAGGGGTGCCCCAAGAGTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR CAA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCAGAGATCCATTTCACTaGACAGTGATCAGGATATCC +
Preference number: 3 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAIRDPFH*TVIRIS
Trigger: GGATATCCTGATCACTGTCAAGTGAAATGGATCTCT...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR GCA 72 bp AACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTaGACATCAGAGAGGCTTTACACAGTGACTGGCTGC +
Preference number: 3 (lower is better)
Translates to: NPIFVRKQPTLK*TSERLYTVTGC
Trigger: GCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 3 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR GCA 72 bp AGAAATGATTGTGTTGTCAAGGAAGTGACCTGTGACTaGACAGAACCCCATCTTTGTGAGAAAGCAACCCAC +
Preference number: 3 (lower is better)
Translates to: RNDCVVKEVTCD*TEPHLCEKATH
Trigger: GTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGTCACAGGTCACTTCCTTGACAACACAATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR-3UTR CAA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
3UTR-3UTR CAA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCCCCTGAATTGCAAGTaGGAGTTCGTAAGAATCTAC +
Preference number: 3 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNPLNCK*EFVRIY
Trigger: GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGGCTCCTGGCTCCCTGTaGGCGCGGCATGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVAPGSL*ARHGAG
Trigger: ACCCGCCCCATGCCGCGCCCACAGGGAGCCAGGAGC...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTGGGCTCGGGCTGCGTaGACTCAGGCTCCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFWARAA*TQAPGR
Trigger: GCGACCGGGAGCCTGAGTGCACGCAGCCCGAGCCCA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCCGGGACGCGCAGGTaGTTGGGGGCATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: HWWFTVAFQAGLSSSPSPAGTRR*LGASWG
Trigger: TCCCCAGGATGCCCCCAAGCACCTGCGCGTCCCGGC...CGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCCCGTGGGCTCGGGCTaGGTGCACTCAGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVPVGSG*VHSGSR
Trigger: CCGGGAGCCTGAGTGCACGCAGCCCGAGCCCACGGG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTATCCTGGGGACGGCCTaGGCGGGCGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPILGTA*AGGESI
Trigger: GATGGACTCCCCGCCCGCCCAGGCCGTCCCCAGGAT...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGACGCGCAGGTGCTTaGGGGCATCCTGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLGRAGA*GHPGDG
Trigger: GCCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGGCTCCTGGCTCCCTGTaGGCGCGGCATGGGGCGGGT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLAPGSL*ARHGAG
Trigger: ACCCGCCCCATGCCGCGCCCACAGGGAGCCAGGAGC...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTCTGCGCACAGGCTCCTaGCTCCCTGTGGGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPLRTGS*LPVGAA
Trigger: TGCCGCGCCCACAGGGAGCCAGGAGCCTGTGCGCAG...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAGTGCAGCTCCTCCTaGCGGGCGATCTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLQCSSS*RAIFPA
Trigger: GGCGGGGAAGATCGCCCGGCAGGAGGAGCTGCACTG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGCTCCTCCACCGTCTaGAGCAGGGCCGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSSSTV*SRADRS
Trigger: GGAGCGGTCGGCCCTGCTGCAGACGGTGGAGGAGCT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGACGCGCAGGTGCTTaGGGGCATCCTGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: TLVVHCCFPGRAFFLTFSGRAGA*GHPGDG
Trigger: GCCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCC...GGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCAGAAGGACTTGCGCATaGGCCTGCGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHARRTCA*ACAQAP
Trigger: AGGAGCCTGTGCGCAGGCCCATGCGCAAGTCCTTCT...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGCTCACACAGCTGGGCTaGCGCCTTAGCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVLTQLG*RLSCLL
Trigger: CAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAG...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGGGCAGCGTAGAGGCTaGGGCCGATCTCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFGQRRG*GRSRAP
Trigger: AGGAGCACGAGATCGGCCCCAGCCTCTACGCTGCCC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGTGGTGGACTGCCTGCTaGGTCTTCGCACCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPWWTAC*VFAPQP
Trigger: TGGCTGAGGTGCGAAGACTCAGCAGGCAGTCCACCA...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGGCGGAGCCTTCTTGTaGGCCACCGTCACGCGGCCG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSGGAFL*ATVTRP
Trigger: CGGCCGCGTGACGGTGGCGCACAAGAAGGCTCCGCC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCGCCTCCTGAAGGCCTaGTGGGGCGACAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVRLLKA*WGDSGA
Trigger: AGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCAGCTCCTCCACCGTCTaGAGCAGGGCCGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAISSSTV*SRADRS
Trigger: GGAGCGGTCGGCCCTGCTGCAGACGGTGGAGGAGCT...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGGGCTCGGGCTGCGTaGACTCAGGCTCCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSWARAA*TQAPGR
Trigger: GCGACCGGGAGCCTGAGTGCACGCAGCCCGAGCCCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGCCCGTGGGCTCGGGCTaGGTGCACTCAGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKPVGSG*VHSGSR
Trigger: CCGGGAGCCTGAGTGCACGCAGCCCGAGCCCACGGG...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCACCCGTGGGCTCGGGCTaGGTGCACTCAGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAPVGSG*VHSGSR
Trigger: CCGGGAGCCTGAGTGCACGCAGCCCGAGCCCACGGG...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGCACTGCGGCCACCGTaGAGGCCTGTTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLALRPP*RPVSGS
Trigger: TGACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCCTGCTGGGTTCATCATaGCTGCAGGCCTTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLLLGSS*LQALQQ
Trigger: TTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAG...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGGCGGAGCCTTCTTGTaGGCCACCGTCACGCGGCCG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAGGAFL*ATVTRP
Trigger: CGGCCGCGTGACGGTGGCGCACAAGAAGGCTCCGCC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGCGCCTTAGCTGTCTaGTGCACTGCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVGALAV*CTAATV
Trigger: CACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGAATCGCACGCCTTCTaGGGGGTGGCTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLESHAF*GVATRR
Trigger: CCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCTGTTGCAATCTCTCCTaGAGAGCTGTCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHACCNLS*RAVSRP
Trigger: CGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACA...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGCAACCCAGGGCAGCATaGGCATGGTGGTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPQPRAA*AWWSGN
Trigger: ATTCCCTGACCACCATGCCCATGCTGCCCTGGGTTG...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGCGCAGGCCGGGCTaGGAGAAGGACTTGCGCATG +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVERRPG*EKDLRM
Trigger: CATGCGCAAGTCCTTCTCCCAGCCCGGCCTGCGCTC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGCAGCGTAGAGGCTaGGGCCGATCTCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVGQRRG*GRSRAP
Trigger: AGGAGCACGAGATCGGCCCCAGCCTCTACGCTGCCC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTCTTCTCCACCCAGCTaGGGACACAGCAGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSSPPS*GHSRSR
Trigger: GCGGGACCTGCTGTGTCCTCAGCTGGGTGGAGAAGA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGGTGGACTGCCTGCTaGGTCTTCGCACCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLWWTAC*VFAPQP
Trigger: TGGCTGAGGTGCGAAGACTCAGCAGGCAGTCCACCA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR TCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGGCTCTTCTGGGAGATaGCTCTCCGAGTCACTGGAC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFGSSGR*LSESLD
Trigger: GTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCTCAGGGCCACTGGGATGAACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCAGGGAGCCCACCAGCTaGAGGCCAAAATCCACCGAG +
Preference number: 4 (lower is better)
Translates to: SQGHWDELEAAGFIMTAGREPTS*RPKSTE
Trigger: CTCGGTGGATTTTGGCCTGCAGCTGGTGGGCTCCCT...GCCTGCAGTCATGATGAACCCAGCAGCTTCTAGTTCATCCCAGTGGCCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGATGGTGGTCAGGGAATaGACAGGCAGGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLMVVRE*TGREPT
Trigger: GGTGGGCTCCCTGCCTGTGCATTCCCTGACCACCAT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGGCTGGGAGAAGGACTTaGGCATGGGCCTGCGCACAG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLAGRRT*AWACAQ
Trigger: CTGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGC...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCGGAGGCCCCCATCCTaGAGCTCCTTCCTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVRRPPS*SSFLKA
Trigger: GGCCTTTAGGAAGGAGCTGCAGGATGGGGGCCTCCG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAGCTGTCTGCTGCACTaGGGCCACCGTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLSCLLH*GHREGL
Trigger: CAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGCCTTAGCTGTCTGCTaGACTGCGGCCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLALAVC*TAATVK
Trigger: CTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCCGGAGGAATATCTGCTaGCTCCAGGAATGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFRRNIC*LQECLR
Trigger: CCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCG...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTCCATCGCACCCGGCTaGCTGCGCTCTTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSIAPG*LRSSRR
Trigger: GCGGCGGGAAGAGCGCAGCCAGCCGGGTGCGATGGA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGCAGCATGGGCATGGTaGTCAGGGAATGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFAAWAW*SGNAQA
Trigger: TGCCTGTGCATTCCCTGACCACCATGCCCATGCTGC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCACTCCTGAAGGCCTGCTaGGGCGACAGCGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLALLKAC*GDSGAG
Trigger: GCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAG...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCGCTTTACACAGTGACTaGCTGCAAGCAGGACAACCG +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHAALHSD*LQAGQP
Trigger: CGGTTGTCCTGCTTGCAGCCAGTCACTGTGTAAAGC...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCTTCTCCACCCAGCTaGGGACACAGCAGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSSPPS*GHSRSR
Trigger: GCGGGACCTGCTGTGTCCTCAGCTGGGTGGAGAAGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCGCACTGCGGCCACCGTaGAGGCCTGTTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSALRPP*RPVSGS
Trigger: TGACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGC...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAGGGAGCCCACCAGCTaGAGGCCAAAATCCACCGAG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLREPTS*RPKSTE
Trigger: CTCGGTGGATTTTGGCCTGCAGCTGGTGGGCTCCCT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTATGGTGGTCAGGGAATaGACAGGCAGGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVMVVRE*TGREPT
Trigger: GGTGGGCTCCCTGCCTGTGCATTCCCTGACCACCAT...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTCCTTTCTGGTGGACTaGCTGCTGAGTCTTCGCACC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSFLVD*LLSLRT
Trigger: GGTGCGAAGACTCAGCAGGCAGTCCACCAGAAAGGA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp GCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAGAGCAGTGCAGCTCCTCCTaGCGGGCGATCTTCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AQNPIFVRKQPTLKCTSEQCSSS*RAIFPA
Trigger: GGCGGGGAAGATCGCCCGGCAGGAGGAGCTGCACTG...CTCTGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCGGAGGCCCCCATCCTaGAGCTCCTTCCTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSRRPPS*SSFLKA
Trigger: GGCCTTTAGGAAGGAGCTGCAGGATGGGGGCCTCCG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATAGCTGTCTGCTGCACTaGGGCCACCGTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHSCLLH*GHREGL
Trigger: CAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCT...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTAGCTTGTGCAGGCTTTaGAGGGGGCAGCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSLCRL*RGQPSH
Trigger: GTGTGAGGGCTGCCCCCTGCAAAGCCTGCACAAGCT...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCGCCTCCTGAAGGCCTaGTGGGGCGACAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPRLLKA*WGDSGA
Trigger: AGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTGTGACTCAGGGTGTTTaGTCGCCTCCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLVTQGV*SPPEGL
Trigger: CAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCAC...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCCATGAGGCGTCTCTGTaGTCACTGAGTGATACCTCA +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHAHEASL*SLSDTS
Trigger: TGAGGTATCACTCAGTGAGCACAGAGACGCCTCATG...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLCCLQE*LRVFTG
Trigger: TCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLCCLQE*LRVFTG
Trigger: TCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTCTTTCAAAGGTCCGCCATGGTGGTTTGCTaGACCTACCAACCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LSRQGFLPHLLRQLFQRSAMVVC*TYQPIA
Trigger: GGCGATGGGTTGGTAGGTGCAGCAAACCACCATGGC...GGACCTTTGAAAGAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAGGACGCGCAGGTGCTTaGGGGCATCCTGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSGRAGA*GHPGDG
Trigger: GCCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCC...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TCTCAGGGCCACTGGGATGAACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCGCAGCATGGGCATGGTaGTCAGGGAATGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: SQGHWDELEAAGFIMTAGAAWAW*SGNAQA
Trigger: TGCCTGTGCATTCCCTGACCACCATGCCCATGCTGC...GCCTGCAGTCATGATGAACCCAGCAGCTTCTAGTTCATCCCAGTGGCCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCTCACACAGCTGGGCTaGCGCCTTAGCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLLTQLG*RLSCLL
Trigger: CAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCAGCCCTCACACAGCTaGGCTGGCGCCTTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSQPSHS*AGALAV
Trigger: GACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGGCTG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGCGACAGCGGAGCTaGCTCTTCTGGGAGATGACT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVGRQRS*LFWEMT
Trigger: AGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGACCTCGGTGATGACGTaGCACACCTTGCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLTSVMT*HTLPNS
Trigger: GCTGTTGGGCAAGGTGTGCCACGTCATCACCGAGGT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGGTGGACTGCCTGCTaGGTCTTCGCACCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSWWTAC*VFAPQP
Trigger: TGGCTGAGGTGCGAAGACTCAGCAGGCAGTCCACCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTAGGGGATCCCACTGTTaGCTTCTCCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVRGSHC*LLPGSG
Trigger: ACCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCT...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCATTCGATGGGGAAGTaGCTCAGGGTGTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLHSMGK*LRVFAR
Trigger: GCGAGCAAACACCCTGAGTCACTTCCCCATCGAATG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCCCAGCGGGAACTGTaGGGCAAACATGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSQREL*GKHGEE
Trigger: TTCCTCACCATGTTTGCCTCACAGTTCCCGCTGGGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGCCTTGCCAGGGACGCTaGGGGTGTAGTCGCCACACA +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKPCQGR*GCSRHT
Trigger: TGTGTGGCGACTACACCCTCAGCGTCCCTGGCAAGG...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGCAGGAGCTGAAGACTaGCCTGGGCGGTGCTTAGAC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSAGAED*PGRCLD
Trigger: GTCTAAGCACCGCCCAGGTCAGTCTTCAGCTCCTGC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR GCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACGCCGGGACGCGCAGGTaGTTGGGGGCATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDAGTRR*LGASWG
Trigger: TCCCCAGGATGCCCCCAAGCACCTGCGCGTCCCGGC...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCCGGGACGCGCAGGTaGTTGGGGGCATCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLAGTRR*LGASWG
Trigger: TCCCCAGGATGCCCCCAAGCACCTGCGCGTCCCGGC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATATATGCAGAAACCTGTaGCGCGGCGCGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHICRNL*RGALRA
Trigger: GGCTCTGAGCGCGCCGCGGCACAGGTTTCTGCATAT...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGTCCTTTCTGGTGGACTaGCTGCTGAGTCTTCGCACC +
Preference number: 4 (lower is better)
Translates to: HWWFTVAFQAGLSSSPSPSFLVD*LLSLRT
Trigger: GGTGCGAAGACTCAGCAGGCAGTCCACCAGAAAGGA...CGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHAEHAEA*TQRCWN
Trigger: ATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTC...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGCCTTAGCTGTCTGCTaGACTGCGGCCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSALAVC*TAATVK
Trigger: CTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAGCTTGTGCAGGCTTTaGAGGGGGCAGCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSSLCRL*RGQPSH
Trigger: GTGTGAGGGCTGCCCCCTGCAAAGCCTGCACAAGCT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCCTCTCACAGAGCTTGTaGAGGCTTTGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAILSQSL*RLCRGQ
Trigger: CTGCCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAG...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCTCTCACAGAGCTTGTaGAGGCTTTGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLLSQSL*RLCRGQ
Trigger: CTGCCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGCTGATGGAGTGTTCCTaGAGGCCTCTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVLMECS*RPLALL
Trigger: TAATAAAGCCAGAGGCCTGCAGGAACACTCCATCAG...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCTCATAAGTTTCCTTTaGGAAACCCCCGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLLISFL*ETPGDP
Trigger: GGGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVCCLQE*LRVFTG
Trigger: TCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGAATCGCACGCCTTCTaGGGGGTGGCTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAESHAF*GVATRR
Trigger: CCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFGTSFG*CLLGNW
Trigger: CCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGGCCTGCTTCAGCTTaGTCTCACTGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLWPASA*SHCSGA
Trigger: AGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTGTTGCAATCTCTCCTaGAGAGCTGTCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLCCNLS*RAVSRP
Trigger: CGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLMDPRL*LRHDLE
Trigger: CTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCAT...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTCCATCGCACCCGGCTaGCTGCGCTCTTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDSIAPG*LRSSRR
Trigger: GCGGCGGGAAGAGCGCAGCCAGCCGGGTGCGATGGA...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGTCGCCTGCTCCTGATTaGTTAATGTCGTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPSPAPD*LMSSGA
Trigger: AGCACCTGACGACATTAACCAATCAGGAGCAGGCGA...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCACTCCTGAAGGCCTGCTaGGGCGACAGCGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSLLKAC*GDSGAG
Trigger: GCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAG...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGTTCCTGGCATTCGATaGGGAAGTGACTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFVPGIR*GSDSGC
Trigger: ACACCCTGAGTCACTTCCCCATCGAATGCCAGGAAC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTTTCTTTTCCTCTGGTaGGGGGCCAAAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLFLFLW*GAKGPI
Trigger: GATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGACCTCGGTGATGACGTaGCACACCTTGCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLTSVMT*HTLPNS
Trigger: GCTGTTGGGCAAGGTGTGCCACGTCATCACCGAGGT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGTAAATGTGTGCCATGGTGGTTTGCTGCACCTACCAACCCATCGCCTAGATATTGGTGGACTGCCTGCTaGGTCTTCGCACCTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GKCVPWWFAAPTNPSPRYWWTAC*VFAPQP
Trigger: TGGCTGAGGTGCGAAGACTCAGCAGGCAGTCCACCA...ATATCTAGGCGATGGGTTGGTAGGTGCAGCAAACCACCATGGCACACATTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCATTCGATGGGGAAGTaGCTCAGGGTGTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVHSMGK*LRVFAR
Trigger: GCGAGCAAACACCCTGAGTCACTTCCCCATCGAATG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCATTCGATGGGGAAGTaGCTCAGGGTGTTTGCTCGC +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLHSMGK*LRVFAR
Trigger: GCGAGCAAACACCCTGAGTCACTTCCCCATCGAATG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTAGAGGCTTTACACAGTaGCTGGCTGCAAGCAGGACA +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPRGFTQ*LAASRT
Trigger: TGTCCTGCTTGCAGCCAGTCACTGTGTAAAGCCTCT...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAAGGAAGTGACCTGTaGCTGCACAGAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLQGSDL*LHRTPS
Trigger: AGATGGGGTTCTGTGCAGTCACAGGTCACTTCCTTG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTGCTTTCAGGGCCACTGGGATaGACTAGAAGCTGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: CRPCSKLHVADTGGSLLLSGPLG*TRSCWV
Trigger: AACCCAGCAGCTTCTAGTTCATCCCAGTGGCCCTGA...AAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCACTTCCAAGCGCGTGTaGAGTCACAGGATAAATAGT +
Preference number: 4 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLTSKRV*SHRINS
Trigger: ACTATTTATCCTGTGACTTCACACGCGCTTGGAAGT...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACAACTCGGACGGGCAGTaGAGCTCCTCCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDNSDGQ*SSSCRA
Trigger: CGCCCGGCAGGAGGAGCTGCACTGCCCGTCCGAGTT...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAACTCGGACGGGCAGTaGAGCTCCTCCTGCCGGGCG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYNSDGQ*SSSCRA
Trigger: CGCCCGGCAGGAGGAGCTGCACTGCCCGTCCGAGTT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCTCGATATCTGTGGGCTaGACAATATTGTGTCCGCTA +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHASISVG*TILCPL
Trigger: TAGCGGACACAATATTGTGCAGCCCACAGATATCGA...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGCCATCTGCGATGTCTaGTTCATCTCCCCAATATGG +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFAICDV*FISPIW
Trigger: CCATATTGGGGAGATGAAGCAGACATCGCAGATGGC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCTCCAATATTCTCTGCTaGCATCTGCGATGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHASNILC*HLRCLL
Trigger: AAGCAGACATCGCAGATGGCAGCAGAGAATATTGGA...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCTCATAAGTTTCCTTTaGGAAACCCCCGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVLISFL*ETPGDP
Trigger: GGGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGACTCGGAGGAATATCTaGTGCCTCCAGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLTRRNI*CLQECL
Trigger: GAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAGAGGAATCGCACGCCTTCTaGGGGGTGGCTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: AQNPIFVRKQPTLKCTSEESHAF*GVATRR
Trigger: CCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTC...CTCTGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCCCGTGGGCTCGGGCTaGGTGCACTCAGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNPVGSG*VHSGSR
Trigger: CCGGGAGCCTGAGTGCACGCAGCCCGAGCCCACGGG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGCTGGTGGTTCACTGTTaGTTTCCAGGCAGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HWWFTVAFQAGLSSSPSPLVVHC*FPGRAF
Trigger: GAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAG...CGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCTTATTGGTTCCATCTTaGGAAGGGTCTGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLLLVPS*EGSGNS
Trigger: TGAGTTCCCAGACCCTTCCCAAGATGGAACCAATAA...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGTGCACTCAAAGATGCTaGAATAGATCAGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPCTQRC*NRSGDP
Trigger: GGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCA...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGAAGGACTTGCGCATaGGCCTGCGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLARRTCA*ACAQAP
Trigger: AGGAGCCTGTGCGCAGGCCCATGCGCAAGTCCTTCT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCCAGATAAACCCAAAGTaGTCCACGTGTCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFQINPK*STCLMP
Trigger: GGGCATCAGACACGTGGACCACTTTGGGTTTATCTG...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTCCTGAAGGCCTGCTaGGGCGACAGCGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLLKAC*GDSGAG
Trigger: GCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTGTGGCCTCAAGGCTTTaGATCCTACCATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPVASRL*ILPFAT
Trigger: GGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCAC...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGTGGCCTCAAGGCTTTaGATCCTACCATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLVASRL*ILPFAT
Trigger: GGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCAC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTGGAGCTTCTCAATGGTaGCCTCAAGGCTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLGASQW*PQGFGS
Trigger: GGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCC...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTCTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLLDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCTCCTCGAAGGAGCTaGAGAAGCCGCTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASPRRS*RSRCFG
Trigger: TCCGAAGCAGCGGCTTCTTCAGCTCCTTCGAGGAGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGGCTCTTCTGGGAGATaGCTCTCCGAGTCACTGGAC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAGSSGR*LSESLD
Trigger: GTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCAAGCTCTCCCAGCTCTaGATAATCTTCATATCTGCT +
Preference number: 4 (lower is better)
Translates to: AEGVVATQTLSEERWTHAKLSQL*IIFISA
Trigger: AGCAGATATGAAGATTATTCAGAGCTGGGAGAGCTT...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTGCCTGCTACAAAGCTaGGACCTTGGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLCLLQS*DLGNIP
Trigger: TGGGATATTGCCAAGGTCTCAGCTTTGTAGCAGGCA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGCCTGCTACAAAGCTaGGACCTTGGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLCLLQS*DLGNIP
Trigger: TGGGATATTGCCAAGGTCTCAGCTTTGTAGCAGGCA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTCCCAGCGGGAACTGTaGGGCAAACATGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSSQREL*GKHGEE
Trigger: TTCCTCACCATGTTTGCCTCACAGTTCCCGCTGGGA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCCTTTGCCTGAGGCATaGTCTCGAGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSPLPEA*SRALPA
Trigger: AGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTCAAGCAGGACAACCGTaGGCAGCATTTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPQAGQP*AAFCLL
Trigger: CAACAAGCAAAATGCTGCTCACGGTTGTCCTGCTTG...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGTGTTGTCAAGGAAGTaGCCTGTGACTGCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLVLSRK*PVTAQN
Trigger: GTTCTGTGCAGTCACAGGTCACTTCCTTGACAACAC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CTGAGGATAATGGTTTCCAGCTCCATCCATGTTCCTAGAAAGGACGTGATCTCGATATGCAGAAACCTGTaGCGCGGCGCGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRIMVSSSIHVPRKDVISICRNL*RGALRA
Trigger: GGCTCTGAGCGCGCCGCGGCACAGGTTTCTGCATAT...CGAGATCACGTCCTTTCTAGGAACATGGATGGAGCTGGAAACCATTATCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTTTACACACTTCATATaGAGAAACCTGTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFFTHFI*RNLCRG
Trigger: GCCGCGGCACAGGTTTCTGCATATGAAGTGTGTAAA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCATGGTGGTCAGGGAATaGACAGGCAGGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPMVVRE*TGREPT
Trigger: GGTGGGCTCCCTGCCTGTGCATTCCCTGACCACCAT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGGCGCCTTAGCTGTCTaGTGCACTGCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLGALAV*CTAATV
Trigger: CACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCTCATAAGTTTCCTTTaGGAAACCCCCGGGGACCCC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLISFL*ETPGDP
Trigger: GGGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAIGTSFG*CLLGNW
Trigger: CCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCC...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTCAGCTTGCTCTCACTaGTCAGGAGCTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLSACSH*SGASQW
Trigger: CCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGGCCTGCTTCAGCTTaGTCTCACTGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSWPASA*SHCSGA
Trigger: AGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLKVSMA*FSLLSL
Trigger: CAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAATGGGCTCGGGCTGCGTaGACTCAGGCTCCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQWARAA*TQAPGR
Trigger: GCGACCGGGAGCCTGAGTGCACGCAGCCCGAGCCCA...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGTTGCAATCTCTCCTaGAGAGCTGTCAGTCGCCCG +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCCNLS*RAVSRP
Trigger: CGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSMDPRL*LRHDLE
Trigger: CTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCAT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGATCCATCGCACCCGGCTaGCTGCGCTCTTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: YSISDLAQDYQPFPQVNRSIAPG*LRSSRR
Trigger: GCGGCGGGAAGAGCGCAGCCAGCCGGGTGCGATGGA...TCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp TATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGAATCCTGGGGACGGCCTaGGCGGGCGGGGAGTCCATC +
Preference number: 4 (lower is better)
Translates to: YSISDLAQDYQPFPQVNRILGTA*AGGESI
Trigger: GATGGACTCCCCGCCCGCCCAGGCCGTCCCCAGGAT...TCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGCAGCATGGGCATGGTaGTCAGGGAATGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAAAWAW*SGNAQA
Trigger: TGCCTGTGCATTCCCTGACCACCATGCCCATGCTGC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp TTCCGCACAGACTCAGCGAAGATCACAACAAAACTTCCAAGCGCGTGTGAAGTCCAACCCAGGGCAGCATaGGCATGGTGGTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: FRTDSAKITTKLPSACEVQPRAA*AWWSGN
Trigger: ATTCCCTGACCACCATGCCCATGCTGCCCTGGGTTG...GACTTCACACGCGCTTGGAAGTTTTGTTGTGATCTTCGCTGAGTCTGTGCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp TCTCAGGGCCACTGGGATGAACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCCAGATACTCTGCCGGTaGACAGCGTCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: SQGHWDELEAAGFIMTAGQILCR*TASSLI
Trigger: GATTAAGGAAGACGCTGTCCACCGGCAGAGTATCTG...GCCTGCAGTCATGATGAACCCAGCAGCTTCTAGTTCATCCCAGTGGCCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCTGCGCACAGGCTCCTaGCTCCCTGTGGGCGCGGCA +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNLRTGS*LPVGAA
Trigger: TGCCGCGCCCACAGGGAGCCAGGAGCCTGTGCGCAG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGTCCGCTAATGAGGTaGTTCTCAATGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLCPLMR*FSMSLS
Trigger: GGAGAGCGACATTGAGAACCACCTCATTAGCGGACA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGTTCCTGCAGGCCTCTaGCTTTATTACCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSVPAGL*LYYPGT
Trigger: TGTCCCGGGGTAATAAAGCCAGAGGCCTGCAGGAAC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCACGGAGCTGGCTCTTCTaGGAGATGACTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLARSWLF*EMTLRV
Trigger: GACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCG...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCGGGCGACAGCGGAGCTaGCTCTTCTGGGAGATGACT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPGRQRS*LFWEMT
Trigger: AGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCC...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGACCTCGGTGATGACGTaGCACACCTTGCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKTSVMT*HTLPNS
Trigger: GCTGTTGGGCAAGGTGTGCCACGTCATCACCGAGGT...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGGGCAGCGTAGAGGCTaGGGCCGATCTCGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLGQRRG*GRSRAP
Trigger: AGGAGCACGAGATCGGCCCCAGCCTCTACGCTGCCC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTCATATCAAAGACTCTaGCTACGAATCCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSYQRL*LRIPAG
Trigger: TCCCGCTGGGATTCGTAGCCAGAGTCTTTGATATGA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGGTGGCCTCAAGGCTTTaGATCCTACCATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLVASRL*ILPFAT
Trigger: GGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCAC...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGAGCTTCTCAATGGTaGCCTCAAGGCTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVGASQW*PQGFGS
Trigger: GGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCACCTGTTTAGGCACTaGTGGCAGCACTGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSHLFRH*WQHCGL
Trigger: GAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
3UTR CAA 72 bp TTCATCATGACTGCAGGCCTTGCAGCAAGCTTCACGTaGCTGACACTGGTGGTTCACTGTTGCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FIMTAGLAASFT*LTLVVHCCFPG
Trigger: GCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAGGGGATCCCACTGTTaGCTTCTCCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPRGSHC*LLPGSG
Trigger: ACCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR TCA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCTTTGATCATCGGCTTTaGACACATAGCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLFDHRL*THSRYS
Trigger: AGAGTATCTGCTATGTGTTCAAAGCCGATGATCAAA...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGTGGTCCACGTGTCTaGTGCCCTGAGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASGPRV*CPESKR
Trigger: CCTTTTGCTCTCAGGGCATCAGACACGTGGACCACT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGCACTGCGGCCACCGTaGAGGCCTGTTTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYALRPP*RPVSGS
Trigger: TGACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGATAGTCGCCTGCTCCTaGTTGGTTAATGTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLIVACS*LVNVVR
Trigger: CCTGACGACATTAACCAATCAGGAGCAGGCGACTAT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAAGTCCTTTCGTTCATaGGGCGTCTCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLKSFRS*GVSVLT
Trigger: AGTGAGCACAGAGACGCCTCATGAACGAAAGGACTT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCAGCAGCAGTATCTGTTaGAGAATAGCCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSSSIC*RIAFCH
Trigger: GTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAGCCGGTTTCCTCCCTaGGAAGCACACTTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSRFPP*EAHFPL
Trigger: AAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGGTCCTCGTCATCCTaGGAGAGGAGAGTCACTGTG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLARSSSS*ERRVTV
Trigger: CACAGTGACTCTCCTCTCTCAGGATGACGAGGACCT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTCTTTCAAAGGTCCCTAAAATCTAGCCTGTaGTTTCCGCACAGACTCAGC +
Preference number: 4 (lower is better)
Translates to: LSRQGFLPHLLRQLFQRSLKSSL*FPHRLS
Trigger: GCTGAGTCTGTGCGGAAATCACAGGCTAGATTTTAG...GGACCTTTGAAAGAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTGGAGGAGCAGGAGCTaGAGACTGACCTGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYWRSRS*RLTWAV
Trigger: CACCGCCCAGGTCAGTCTTCAGCTCCTGCTCCTCCA...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGATGTTTCGTTCATaGGGCGTCTCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVEMFRS*GVSVLT
Trigger: AGTGAGCACAGAGACGCCTCATGAACGAAACATCTC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510573.6
CDS-3UTR GCA 90 bp CATGACTGCAGGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTTACACACTTCATATaGAGAAACCTGTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: HDCRPCSKLHVADTGGSLFTHFI*RNLCRG
Trigger: GCCGCGGCACAGGTTTCTGCATATGAAGTGTGTAAA...CAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCCTTTCTGGTGGACTaGCTGCTGAGTCTTCGCACC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASFLVD*LLSLRT
Trigger: GGTGCGAAGACTCAGCAGGCAGTCCACCAGAAAGGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp CACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: HWWFTVAFQAGLSSSPSPTQSRT*LVTGSF
Trigger: AAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGT...CGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLTQSRT*LVTGSF
Trigger: AAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGT...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR GCA 90 bp GGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTCGCTTGCACTCAAAGATaGTGGAATAGATCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GSLLLSRQGFLPHLLRQLACTQR*WNRSGD
Trigger: ATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGC...GAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAGCTGTCTGCTGCACTaGGGCCACCGTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYSCLLH*GHREGL
Trigger: CAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCGGAGGAATATCTGCTaGCTCCAGGAATGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPRRNIC*LQECLR
Trigger: CCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCAATAAGAATCGCATaGTGCTGGGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSIRIA*CWEVSC
Trigger: GCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTCAGCTTGCTCTCACTaGTCAGGAGCTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSACSH*SGASQW
Trigger: CCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCACATGCCCCCTGAATTaGAAGTTGGAGTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFTCPLN*KLEFVR
Trigger: TCTTACGAACTCCAACTTGCAATTCAGGGGGCATGT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCTCAGACCCCACAACTaGAGCTCACATGCTAGCAAT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLLRPHN*SSHASN
Trigger: ATTGCTAGCATGTGAGCTGCAGTTGTGGGGTCTGAG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TGGGATGAACTAGAAGCTGCTGGGTTCATCATGACTGCAGGCCTTGCAGCAAGCTGGGTTCATCATGACTaGAGGCCTTGCAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: WDELEAAGFIMTAGLAASWVHHD*RPCSKL
Trigger: AAGCTTGCTGCAAGGCCTGCAGTCATGATGAACCCA...GCTTGCTGCAAGGCCTGCAGTCATGATGAACCCAGCAGCTTCTAGTTCATCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCATTACGGTAGGAGATaGTCTTTGGCACAGCATTCC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLHYGRR*SLAQHS
Trigger: GGAATGCTGTGCCAAAGAGCATCTCCTACCGTAATG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR CCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCTGTCCGCTAATGAGGTaGTTCTCAATGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAICPLMR*FSMSLS
Trigger: GGAGAGCGACATTGAGAACCACCTCATTAGCGGACA...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGCTTTTCACACACAGATaGCTCTTTGCTGGTGTTACT +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPLFTHR*LFAGVT
Trigger: AGTAACACCAGCAAAGAGCCATCTGTGTGTGAAAAG...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAGGAGCTCTCAGAGATaGGCAAGGCCTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSRSSQR*ARPPFH
Trigger: GTGAAAAGGAGGCCTTGCCCATCTCTGAGAGCTCCT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCGGAGCTGGCTCTTCTaGGAGATGACTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPRSWLF*EMTLRV
Trigger: GACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCACGGCTGCCGCTGACGTaGTTGAACTTCTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSRLPLT*LNFSMH
Trigger: GTGCATCGAGAAGTTCAATCACGTCAGCGGCAGCCG...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTATAGTCGCCTGCTCCTaGTTGGTTAATGTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSIVACS*LVNVVR
Trigger: CCTGACGACATTAACCAATCAGGAGCAGGCGACTAT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGCCTGCTACAAAGCTaGGACCTTGGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCLLQS*DLGNIP
Trigger: TGGGATATTGCCAAGGTCTCAGCTTTGTAGCAGGCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTCTTCCTCACTCATATaGAGAAGCAAAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSSSLI*RSKMPA
Trigger: AGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTAGCTTGTGCAGGCTTTaGAGGGGGCAGCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLSLCRL*RGQPSH
Trigger: GTGTGAGGGCTGCCCCCTGCAAAGCCTGCACAAGCT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATTTCTCTGCTGCCATCTaGGATGTCTGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHFSAAI*DVCFIS
Trigger: GGAGATGAAGCAGACATCGCAGATGGCAGCAGAGAA...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTTCTCTGCTGCCATCTaGGATGTCTGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSFSAAI*DVCFIS
Trigger: GGAGATGAAGCAGACATCGCAGATGGCAGCAGAGAA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCCAATATTCTCTGCTaGCATCTGCGATGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSNILC*HLRCLL
Trigger: AAGCAGACATCGCAGATGGCAGCAGAGAATATTGGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCGCCTCCTGAAGGCCTaGTGGGGCGACAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNRLLKA*WGDSGA
Trigger: AGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTCAATAAGAATCGCATaGTGCTGGGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLSIRIA*CWEVSC
Trigger: GCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLGQGSV*VSCCWF
Trigger: AAACCAACAGCAGCTTACGCAAACAGAACCTTGACC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTTGGATCCTACCATTTaGCACCTGCAACTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLLDPTI*HLQLFK
Trigger: CTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTAGCTCCTCCACCGTCTaGAGCAGGGCCGACCGCTCC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSSSSTV*SRADRS
Trigger: GGAGCGGTCGGCCCTGCTGCAGACGGTGGAGGAGCT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGTACACAGTGACTGGCTaGAAGCAGGACAACCGTGAG +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKYTVTG*KQDNRE
Trigger: CTCACGGTTGTCCTGCTTGCAGCCAGTCACTGTGTA...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TGCAGGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTGCTTAAAGCCGGACTTGCTTaGTTACAGGTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: CRPCSKLHVADTGGSLLLKAGLA*LQVPFW
Trigger: CCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTT...AAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCGCCTGCTCCTGATTaGTTAATGTCGTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSPAPD*LMSSGA
Trigger: AGCACCTGACGACATTAACCAATCAGGAGCAGGCGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGACTCTCCGAGTCACTaGACAGGTCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYDSPSH*TGPPRS
Trigger: GCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGCAAGATGGTTTGCTTTaGATTCAAAGTCCTTTCGTT +
Preference number: 4 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVQDGLL*IQSPFV
Trigger: AACGAAAGGACTTTGAATCCAAAGCAAACCATCTTG...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTTTCTTTTCCTCTGGTaGGGGGCCAAAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPFLFLW*GAKGPI
Trigger: GATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTGTTTGCTGGGAAACTaGTGTTTAAGGTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFCLLGN*CLRWNC
Trigger: GCAATTCCACCTTAAACACCAGTTTCCCAGCAAACA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCACTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLALDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHLSVKA*TVWDGV
Trigger: AACACCATCCCACACTGTCCAGGCCTTAACTGAGAG...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp TATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGATCTTCTCCACCCAGCTaGGGACACAGCAGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: YSISDLAQDYQPFPQVNRSSPPS*GHSRSR
Trigger: GCGGGACCTGCTGTGTCCTCAGCTGGGTGGAGAAGA...TCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTCTCCTCGAAGGAGCTaGAGAAGCCGCTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYSPRRS*RSRCFG
Trigger: TCCGAAGCAGCGGCTTCTTCAGCTCCTTCGAGGAGA...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCGTCTCTGTGCTCACTaGGTGATACCTCATAAGTTT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLRLCAH*VIPHKF
Trigger: AAACTTATGAGGTATCACTCAGTGAGCACAGAGACG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAGAACCCCATCTTTGTaGGAAAGCAACCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLRTPSL*ESNPLL
Trigger: TAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSEHAEA*TQRCWN
Trigger: ATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGGCGCCTTAGCTGTCTaGTGCACTGCGGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSGALAV*CTAATV
Trigger: CACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCAATTCATTCTCTCGCTaGTCATTTCTCGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFNSFSR*SFLGLN
Trigger: ATTGAGACCGAGAAATGAGCAGCGAGAGAATGAATT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTGATGGAGTGTTCCTaGAGGCCTCTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSLMECS*RPLALL
Trigger: TAATAAAGCCAGAGGCCTGCAGGAACACTCCATCAG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGTGACTCAGGGTGTTTaGTCGCCTCCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLVTQGV*SPPEGL
Trigger: CAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCAC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCGGAGGAATATCTGCTaGCTCCAGGAATGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLRRNIC*LQECLR
Trigger: CCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCAATAAGAATCGCATaGTGCTGGGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSIRIA*CWEVSC
Trigger: GCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTAAGAAGCAAAATGCCTaGTACAAAGCTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LKAQVLVILREESHCVRPKKQNA*YKAETL
Trigger: CAAGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTT...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTACCATTTGCCACCTaGAACTGTTCAAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSLPFAT*NCSRRS
Trigger: TGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTAG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCTACCATTTGCCACCTaGAACTGTTCAAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLPFAT*NCSRRS
Trigger: TGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTAG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTTGGATCCTACCATTTaGCACCTGCAACTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLLDPTI*HLQLFK
Trigger: CTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGTGTCATAAATCTGACTaGAGTTTCAGCCTGATCTTT +
Preference number: 4 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPCHKSD*SFSLIF
Trigger: AAAGATCAGGCTGAAACTGCAGTCAGATTTATGACA...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CTGAGGATAATGGTTTCCAGCTCCATCCATGTTCCTAGAAAGGACGTGATCTCGCATGACTGCAGGCCTTaGAGCAAGCTTCACGTTGCT +
Preference number: 4 (lower is better)
Translates to: LRIMVSSSIHVPRKDVISHDCRP*SKLHVA
Trigger: AGCAACGTGAAGCTTGCTGCAAGGCCTGCAGTCATG...CGAGATCACGTCCTTTCTAGGAACATGGATGGAGCTGGAAACCATTATCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACGCAGCATGGGCATGGTaGTCAGGGAATGCACAGGCA +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDAAWAW*SGNAQA
Trigger: TGCCTGTGCATTCCCTGACCACCATGCCCATGCTGC...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCAACCCAGGGCAGCATaGGCATGGTGGTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYQPRAA*AWWSGN
Trigger: ATTCCCTGACCACCATGCCCATGCTGCCCTGGGTTG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAAAGCCGGACTTGCTTaGTTACAGGTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSKAGLA*LQVPFW
Trigger: CCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCGCACCTCGAACTTCTTaGAAAACGTGTCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSAPRTS*KTCRRT
Trigger: AGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGC...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGAGCGCAGGCCGGGCTaGGAGAAGGACTTGCGCATG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSERRPG*EKDLRM
Trigger: CATGCGCAAGTCCTTCTCCCAGCCCGGCCTGCGCTC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAACAGCCCTCACACAGCTaGGCTGGCGCCTTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQQPSHS*AGALAV
Trigger: GACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGGCTG...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAATCTTCATATCTGCTaGAAGAATCGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLNLHIC*KNRTPS
Trigger: AGAAGGCGTGCGATTCTTCCAGCAGATATGAAGATT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCAGCAACCTCGAGAGCTaGTACATCTGGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAISNLES*YIWICK
Trigger: TTTACAGATCCAGATGTACCAGCTCTCGAGGTTGCT...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTCATATCAAAGACTCTaGCTACGAATCCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSSYQRL*LRIPAG
Trigger: TCCCGCTGGGATTCGTAGCCAGAGTCTTTGATATGA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAKAWTV*DGVAIS
Trigger: AGAGATTGCAACACCATCCCACACTGTCCAGGCCTT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCAGAACATGTGGTGTTTaGTTTTCTCTTCCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLRTCGV*FSLPLL
Trigger: TAACAAAGGAAGAGAAAACCAAACACCACATGTTCT...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp CACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGATGTTTCCTTGCTGTaGATGTTATTGGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: HWWFTVAFQAGLSSSPSPDVSLL*MLLVPS
Trigger: AGATGGAACCAATAACATTCACAGCAAGGAAACATC...CGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTCAGGCACTTTTGTTTaGTCATCGGCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSGTFV*SSALNT
Trigger: TGTGTTCAAAGCCGATGATCAAACAAAAGTGCCTGA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGCGATCTTCCCCGCCTaGCGGATGGAGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNAIFPA*RMELMI
Trigger: GATCATCAGCTCCATCCGTCAGGCGGGGAAGATCGC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAGTGGTCCACGTGTCTaGTGCCCTGAGAGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYSGPRV*CPESKR
Trigger: CCTTTTGCTCTCAGGGCATCAGACACGTGGACCACT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCGTCTCTGTGCTCACTaGGTGATACCTCATAAGTTT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSRLCAH*VIPHKF
Trigger: AAACTTATGAGGTATCACTCAGTGAGCACAGAGACG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAGCAGCAGTATCTGTTaGAGAATAGCCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSSSIC*RIAFCH
Trigger: GTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTCTTCCTCACTCATATaGAGAAGCAAAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSSSLI*RSKMPA
Trigger: AGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTCTTCCTCACTCATATaGAGAAGCAAAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLSSSLI*RSKMPA
Trigger: AGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTCGATAAGTTCTTCTTaGAGGACGTGGTACTCAACT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLSISSS*RTWYST
Trigger: AGTTGAGTACCACGTCCTTCAAGAAGAACTTATCGA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TGCAGGCCTTGCAGCAAGCTTCACGTTGCTGACACTGGTGGTTCACTGTTGCTTGATGGACACTTGGATTaGCTGAGAGATGGAGATTTT +
Preference number: 4 (lower is better)
Translates to: CRPCSKLHVADTGGSLLLDGHLD*LRDGDF
Trigger: AAAATCTCCATCTCTCAGTCAATCCAAGTGTCCATC...AAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGCAAGGCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGCTTGCACTCAAAGATaGTGGAATAGATCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSACTQR*WNRSGD
Trigger: ATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGCTGGGAGAAGGACTTaGGCATGGGCCTGCGCACAG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSAGRRT*AWACAQ
Trigger: CTGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCCAGAGCCTCATTTGTaGACTGAAACACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSPEPHL*TETRNR
Trigger: TCTGTTACGTGTTTCAGTGCACAAATGAGGCTCTGG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCCAGAGCCTCATTTGTaGACTGAAACACGTAACAGA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSPEPHL*TETRNR
Trigger: TCTGTTACGTGTTTCAGTGCACAAATGAGGCTCTGG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGCCTTAGCTGTCTGCTaGACTGCGGCCACCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNALAVC*TAATVK
Trigger: CTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAATTCATTCTCTCGCTaGTCATTTCTCGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLNSFSR*SFLGLN
Trigger: ATTGAGACCGAGAAATGAGCAGCGAGAGAATGAATT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCCAATATTCTCTGCTaGCATCTGCGATGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSNILC*HLRCLL
Trigger: AAGCAGACATCGCAGATGGCAGCAGAGAATATTGGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTACTTCCAATATTCTCTaGTGCCATCTGCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSTSNIL*CHLRCL
Trigger: CAGACATCGCAGATGGCAGCAGAGAATATTGGAAGT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGAATCGCACGCCTTCTaGGGGGTGGCTACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSESHAF*GVATRR
Trigger: CCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTGCTGGGAAGTCAGCTaGTTTAAGAGTTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLCWEVS*FKSSLY
Trigger: ATACAAAGAACTCTTAAAGCAGCTGACTTCCCAGCA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAAGAAGCAAAATGCCTaGTACAAAGCTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLKKQNA*YKAETL
Trigger: CAAGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTGTTTCTAGGTTTTCATaGTGCAGAATCAAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLVSRFS*CRIKGL
Trigger: TAAGCCCTTGATTCTGCAGCATGAAAACCTAGAAAC...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGCTACCATTTGCCACCTaGAACTGTTCAAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKLPFAT*NCSRRS
Trigger: TGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTAG...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTTGGATCCTACCATTTaGCACCTGCAACTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSLDPTI*HLQLFK
Trigger: CTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPKVSMA*FSLLSL
Trigger: CAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTACATGCCCCCTGAATTaGAAGTTGGAGTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSTCPLN*KLEFVR
Trigger: TCTTACGAACTCCAACTTGCAATTCAGGGGGCATGT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTGGGCGAGAGCCAACTaGACCTTGCCAGGGACGCTG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNWARAN*TLPGTL
Trigger: CAGCGTCCCTGGCAAGGTGCAGTTGGCTCTCGCCCA...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATCAACCCACTCTTAAGTaGACATCAGAGAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHQPTLK*TSERLY
Trigger: GTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp TTCCGCACAGACTCAGCGAAGATCACAACAAAACTTCCAAGCGCGTGTGAAGTCTGCACTCAAAGATGCTaGAATAGATCAGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: FRTDSAKITTKLPSACEVCTQRC*NRSGDP
Trigger: GGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCA...GACTTCACACGCGCTTGGAAGTTTTGTTGTGATCTTCGCTGAGTCTGTGCGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCTTTTCACACACAGATaGCTCTTTGCTGGTGTTACT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLLFTHR*LFAGVT
Trigger: AGTAACACCAGCAAAGAGCCATCTGTGTGTGAAAAG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAGGGCGACAGCGGAGCTaGCTCTTCTGGGAGATGACT +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQGRQRS*LFWEMT
Trigger: AGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCC...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTCCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLPESPR*FALDSK
Trigger: CTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGG...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAATCTTCATATCTGCTaGAAGAATCGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLNLHIC*KNRTPS
Trigger: AGAAGGCGTGCGATTCTTCCAGCAGATATGAAGATT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTTTCTTTTCCTCTGGTaGGGGGCCAAAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLFLFLW*GAKGPI
Trigger: GATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCTGGGCAGAGAAGTATaGGTGTGTAGGAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPLGREV*VCRKGS
Trigger: CGAACCTTTCCTACACACCCATACTTCTCTGCCCAG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAGCAACCTCGAGAGCTaGTACATCTGGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSNLES*YIWICK
Trigger: TTTACAGATCCAGATGTACCAGCTCTCGAGGTTGCT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGAGGGGATCCCACTGTTaGCTTCTCCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQRGSHC*LLPGSG
Trigger: ACCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCAGGCACTTTTGTTTaGTCATCGGCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSGTFV*SSALNT
Trigger: TGTGTTCAAAGCCGATGATCAAACAAAAGTGCCTGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGCGATCTTCCCCGCCTaGCGGATGGAGCTGATGATC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNAIFPA*RMELMI
Trigger: GATCATCAGCTCCATCCGTCAGGCGGGGAAGATCGC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCGGCTGCCGCTGACGTaGTTGAACTTCTCGATGCAC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNRLPLT*LNFSMH
Trigger: GTGCATCGAGAAGTTCAATCACGTCAGCGGCAGCCG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTCTGTGCTCACTGAGTaGTACCTCATAAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSSVLTE*YLISFL
Trigger: AAGGAAACTTATGAGGTATCACTCAGTGAGCACAGA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCCATTTCAAATACCTaGTTGATGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSISNT*LMVFSI
Trigger: GATGGAAAAGACCATCAATCAGGTATTTGAAATGGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp CTTCACGTTGCTGACACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTTATCCAGTCTACCATTaGTGGACACTTGGATTGACT +
Preference number: 4 (lower is better)
Translates to: LHVADTGGSLLLSRQGFLYPVYH*WTLGLT
Trigger: AGTCAATCCAAGTGTCCATCAATGGTAGACTGGATA...AAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTAGGGAGCCCACCAGCTaGAGGCCAAAATCCACCGAG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSREPTS*RPKSTE
Trigger: CTCGGTGGATTTTGGCCTGCAGCTGGTGGGCTCCCT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR GCA 90 bp TTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACATGGTGGTCAGGGAATaGACAGGCAGGGAGCCCACC +
Preference number: 4 (lower is better)
Translates to: LYSISDLAQDYQPFPQVNMVVRE*TGREPT
Trigger: GGTGGGCTCCCTGCCTGTGCATTCCCTGACCACCAT...GTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPTQSRT*LVTGSF
Trigger: AAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGCTTGCACTCAAAGATaGTGGAATAGATCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAACTQR*WNRSGD
Trigger: ATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAACTTCCAATATTCTCTaGTGCCATCTGCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLATSNIL*CHLRCL
Trigger: CAGACATCGCAGATGGCAGCAGAGAATATTGGAAGT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGTGACTCAGGGTGTTTaGTCGCCTCCTGAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNVTQGV*SPPEGL
Trigger: CAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCAC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLGTSFG*CLLGNW
Trigger: CCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTGCTGGGAAGTCAGCTaGTTTAAGAGTTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVCWEVS*FKSSLY
Trigger: ATACAAAGAACTCTTAAAGCAGCTGACTTCCCAGCA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCTGTTTGCGTAAGCTaGTGTTGGTTTTCTCTAATT +
Preference number: 4 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSVCVS*CWFSLI
Trigger: AATTAGAGAAAACCAACAGCAGCTTACGCAAACAGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAGQGSV*VSCCWF
Trigger: AAACCAACAGCAGCTTACGCAAACAGAACCTTGACC...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCTACCATTTGCCACCTaGAACTGTTCAAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPLPFAT*NCSRRS
Trigger: TGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTAG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGTGCCTACTCCTTCTaGAAGAAGTCAGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCAYSF*KKSDFQ
Trigger: TTGGAAATCTGACTTCTTGCAGAAGGAGTAGGCACA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCGAAGTGACCTGTGACTaGACAGAACCCCATCTTTGT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPEVTCD*TEPHLC
Trigger: ACAAAGATGGGGTTCTGTGCAGTCACAGGTCACTTC...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLITKMV*FGFKVP
Trigger: AGGGACTTTGAATCCAAAGCAAACCATCTTGGTGAT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATTATTGGTTCCATCTTaGGAAGGGTCTGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLALLVPS*EGSGNS
Trigger: TGAGTTCCCAGACCCTTCCCAAGATGGAACCAATAA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAACAACCCAGGGCAGCATaGGCATGGTGGTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQQPRAA*AWWSGN
Trigger: ATTCCCTGACCACCATGCCCATGCTGCCCTGGGTTG...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAAAGCCGGACTTGCTTaGTTACAGGTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPKAGLA*LQVPFW
Trigger: CCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCTCACACAGCTGGGCTaGCGCCTTAGCTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNLTQLG*RLSCLL
Trigger: CAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTAGGAGCTCTCAGAGATaGGCAAGGCCTCCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLRSSQR*ARPPFH
Trigger: GTGAAAAGGAGGCCTTGCCCATCTCTGAGAGCTCCT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGACTCTCCGAGTCACTaGACAGGTCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNDSPSH*TGPPRS
Trigger: GCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGACTCTCCGAGTCACTaGACAGGTCCTCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSDSPSH*TGPPRS
Trigger: GCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAACGGAGCTGGCTCTTCTaGGAGATGACTCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQRSWLF*EMTLRV
Trigger: GACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCG...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGTTTGCTGGGAAACTaGTGTTTAAGGTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCLLGN*CLRWNC
Trigger: GCAATTCCACCTTAAACACCAGTTTCCCAGCAAACA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAGAATCAAGGGCTTATaGCTTCCCAACAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLRIKGL*LPNRLK
Trigger: TTTAAGTCTGTTGGGAAGCCATAAGCCCTTGATTCT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYLDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTACAGTAATCAGGACTaGAGAAGGGACGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVYSNQD*RRDDLV
Trigger: TACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGCTGGTGGCAGCACTGTaGTCTCCTCGTGAAATGGCC +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQLVAAL*SPREMA
Trigger: GGCCATTTCACGAGGAGACCACAGTGCTGCCACCAG...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTCAAGATGGTTTGCTTTaGATTCAAAGTCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLQDGLL*IQSPFL
Trigger: CAAAAAGGGACTTTGAATCCAAAGCAAACCATCTTG...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510573.6
CDS-3UTR TCA 90 bp TTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGGGGATCCCACTGTTaGCTTCTCCCTGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LYSISDLAQDYQPFPQVNRGSHC*LLPGSG
Trigger: ACCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCT...GTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAAGCTCTCCCAGCTCTaGATAATCTTCATATCTGCT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAKLSQL*IIFISA
Trigger: AGCAGATATGAAGATTATTCAGAGCTGGGAGAGCTT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCTTCCTCACTCATATaGAGAAGCAAAATGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASSSLI*RSKMPA
Trigger: AGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTCCCAGCGGGAACTGTaGGGCAAACATGGTGAGGAA +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNSQREL*GKHGEE
Trigger: TTCCTCACCATGTTTGCCTCACAGTTCCCGCTGGGA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTCCATTTCAAATACCTaGTTGATGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLSISNT*LMVFSI
Trigger: GATGGAAAAGACCATCAATCAGGTATTTGAAATGGA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCTGGGACATGCCCCCTaGATTGCAAGTTGGAGTTCG +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNLGHAP*IASWSS
Trigger: CGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTCCTTTGCCTGAGGCATaGTCTCGAGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTPLPEA*SRALPA
Trigger: AGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGG...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTACCCACGCCTTTGCCTaGGGCATGATCTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSTHAFA*GMISSS
Trigger: AGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACACCCACGCCTTTGCCTaGGGCATGATCTCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNTHAFA*GMISSS
Trigger: AGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGT...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp CTTCACGTTGCTGACACTGGTGGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTGATGAGCATTTTGTTTaGTCATCGGCTTTGAACACA +
Preference number: 4 (lower is better)
Translates to: LHVADTGGSLLLSRQGFLDEHFV*SSALNT
Trigger: TGTGTTCAAAGCCGATGATCAAACAAAATGCTCATC...AAGAAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGTGTCAGCAACGTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAATCCTTTCTGGTGGACTaGCTGCTGAGTCTTCGCACC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQSFLVD*LLSLRT
Trigger: GGTGCGAAGACTCAGCAGGCAGTCCACCAGAAAGGA...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTCTCTCACAGAGCTTGTaGAGGCTTTGCAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSLSQSL*RLCRGQ
Trigger: CTGCCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAG...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTTAATGTCGTCAGGTaGTTTTGCAGTTCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVVNVVR*FCSSSF
Trigger: AAAACTAGAACTGCAAAAGCACCTGACGACATTAAC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCATGAGGCGTCTCTGTaGTCACTGAGTGATACCTCA +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYHEASL*SLSDTS
Trigger: TGAGGTATCACTCAGTGAGCACAGAGACGCCTCATG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCAATAATCTTCATATCTaGTGGAAGAATCGCACGCCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSNNLHI*WKNRTP
Trigger: AGGCGTGCGATTCTTCCAGCAGATATGAAGATTATT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCTAGGTTTTCATGCTaGAGAATCAAGGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASRFSC*RIKGLW
Trigger: CCATAAGCCCTTGATTCTGCAGCATGAAAACCTAGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTCTGTTTGCGTAAGCTaGTGTTGGTTTTCTCTAATT +
Preference number: 4 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVSVCVS*CWFSLI
Trigger: AATTAGAGAAAACCAACAGCAGCTTACGCAAACAGA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAATGGCCTGCTTCAGCTTaGTCTCACTGCTCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQWPASA*SHCSGA
Trigger: AGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCA...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYKVSMA*FSLLSL
Trigger: CAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGATGGACCCACGCCTTTaGCTGAGGCATGATCTCGAG +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQMDPRL*LRHDLE
Trigger: CTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCAT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSITKMV*FGFKVP
Trigger: AGGGACTTTGAATCCAAAGCAAACCATCTTGGTGAT...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTTATTGGTTCCATCTTaGGAAGGGTCTGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPLLVPS*EGSGNS
Trigger: TGAGTTCCCAGACCCTTCCCAAGATGGAACCAATAA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCAGATACTCTGCCGGTaGACAGCGTCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYQILCR*TASSLI
Trigger: GATTAAGGAAGACGCTGTCCACCGGCAGAGTATCTG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATTTCCTCGATATCTGTaGGCTGCACAATATTGTGTC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAFPRYL*AAQYCV
Trigger: GACACAATATTGTGCAGCCCACAGATATCGAGGAAA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCAGATAAACCCAAAGTaGTCCACGTGTCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYQINPK*STCLMP
Trigger: GGGCATCAGACACGTGGACCACTTTGGGTTTATCTG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTCGCCTGCTCCTGATTaGTTAATGTCGTCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLSPAPD*LMSSGA
Trigger: AGCACCTGACGACATTAACCAATCAGGAGCAGGCGA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTTTCTTTTCCTCTGGTaGGGGGCCAAAGGGCCCATC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNFLFLW*GAKGPI
Trigger: GATGGGCCCTTTGGCCCCCCACCAGAGGAAAAGAAA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACACCTCGGTGATGACGTaGCACACCTTGCCCAACAGC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNTSVMT*HTLPNS
Trigger: GCTGTTGGGCAAGGTGTGCCACGTCATCACCGAGGT...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCTGGGCAGAGAAGTATaGGTGTGTAGGAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYLGREV*VCRKGS
Trigger: CGAACCTTTCCTACACACCCATACTTCTCTGCCCAG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLSVKA*TVWDGV
Trigger: AACACCATCCCACACTGTCCAGGCCTTAACTGAGAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTACAGTAATCAGGACTaGAGAAGGGACGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSYSNQD*RRDDLV
Trigger: TACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTCGATAAGTTCTTCTTaGAGGACGTGGTACTCAACT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSISSS*RTWYST
Trigger: AGTTGAGTACCACGTCCTTCAAGAAGAACTTATCGA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCCTTTGCCTGAGGCATaGTCTCGAGCTCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNPLPEA*SRALPA
Trigger: AGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATAGACTCAAAGGAACATaGTTGCATTACATCACACAA +
Preference number: 4 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHRLKGT*LHYITQ
Trigger: TTGTGTGATGTAATGCAATCATGTTCCTTTGAGTCT...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTACTGTGTGCGACCTCTaGAAAACTGTCAGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLTVCDL*KTVSCH
Trigger: ATGACAGCTGACAGTTTTTCAGAGGTCGCACACAGT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAAACTGTGGTCTCCTCGTaGAATGGCCGGGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQTVVSS*NGRGDS
Trigger: TGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGT...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTGATGGAGTGTTCCTaGAGGCCTCTGGCTTTATTA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLMECS*RPLALL
Trigger: TAATAAAGCCAGAGGCCTGCAGGAACACTCCATCAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAATGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGA +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQCCLQE*LRVFTG
Trigger: TCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCA...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACACTCGGAGGAATATCTaGTGCCTCCAGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNTRRNI*CLQECL
Trigger: GAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACTCGGAGGAATATCTaGTGCCTCCAGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQTRRNI*CLQECL
Trigger: GAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGT...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQGTSFG*CLLGNW
Trigger: CCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCC...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTCTAGGTTTTCATGCTaGAGAATCAAGGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSRFSC*RIKGLW
Trigger: CCATAAGCCCTTGATTCTGCAGCATGAAAACCTAGA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGCACCTCGAACTTCTTaGAAAACGTGTCGTCGAACT +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYAPRTS*KTCRRT
Trigger: AGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTTTCCTCGATATCTGTaGGCTGCACAATATTGTGTC +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPFPRYL*AAQYCV
Trigger: GACACAATATTGTGCAGCCCACAGATATCGAGGAAA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGTTCCTGCAGGCCTCTaGCTTTATTACCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNVPAGL*LYYPGT
Trigger: TGTCCCGGGGTAATAAAGCCAGAGGCCTGCAGGAAC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGTTCCTGGCATTCGATaGGGAAGTGACTCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNVPGIR*GSDSGC
Trigger: ACACCCTGAGTCACTTCCCCATCGAATGCCAGGAAC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAATCTTCATATCTGCTaGAAGAATCGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPNLHIC*KNRTPS
Trigger: AGAAGGCGTGCGATTCTTCCAGCAGATATGAAGATT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGCGTAAGCTGCTGTTaGTTTTCTCTAATTTATCCA +
Preference number: 4 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCVSCC*FSLIYP
Trigger: TGGATAAATTAGAGAAAACCAACAGCAGCTTACGCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGATAGTCGCCTGCTCCTaGTTGGTTAATGTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQIVACS*LVNVVR
Trigger: CCTGACGACATTAACCAATCAGGAGCAGGCGACTAT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR TCA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATAGGCTCTTCTGGGAGATaGCTCTCCGAGTCACTGGAC +
Preference number: 4 (lower is better)
Translates to: CPIKHLPTMTLINCTYGIGSSGR*LSESLD
Trigger: GTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCC...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAGCAGCAGTATCTGTTaGAGAATAGCCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYSSSIC*RIAFCH
Trigger: GTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGCCTGCTACAAAGCTaGGACCTTGGCAATATCCCA +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQCLLQS*DLGNIP
Trigger: TGGGATATTGCCAAGGTCTCAGCTTTGTAGCAGGCA...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCCATTTCAAATACCTaGTTGATGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASISNT*LMVFSI
Trigger: GATGGAAAAGACCATCAATCAGGTATTTGAAATGGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGCAGCATTTTGCTTGTTaGAGGCACAGGTCCTCGTCA +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQQHFAC*RHRSSS
Trigger: TGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTG...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAGACTCACCCACAGGTaGAGGATCCACATTTCGTTC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNRLTHR*RIHISF
Trigger: GAACGAAATGTGGATCCTTCACCTGTGGGTGAGTCT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR GCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACGCTTGCACTCAAAGATaGTGGAATAGATCAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDACTQR*WNRSGD
Trigger: ATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGC...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAGCCATCTGCGATGTCTaGTTCATCTCCCCAATATGG +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQAICDV*FISPIW
Trigger: CCATATTGGGGAGATGAAGCAGACATCGCAGATGGC...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACACTCGGAGGAATATCTaGTGCCTCCAGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNTRRNI*CLQECL
Trigger: GAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGT...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGCTGGGAAGTCAGCTaGTTTAAGAGTTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPCWEVS*FKSSLY
Trigger: ATACAAAGAACTCTTAAAGCAGCTGACTTCCCAGCA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYGQGSV*VSCCWF
Trigger: AAACCAACAGCAGCTTACGCAAACAGAACCTTGACC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTTGGATCCTACCATTTaGCACCTGCAACTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLDPTI*HLQLFK
Trigger: CTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAAGTGTGGGATGGTGTTaGAATCTCTCCTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQSVGWC*NLSCRA
Trigger: AGCTCTGCAGGAGAGATTGCAACACCATCCCACACT...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTACATGCCCCCTGAATTaGAAGTTGGAGTTCGTAAGA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLTCPLN*KLEFVR
Trigger: TCTTACGAACTCCAACTTGCAATTCAGGGGGCATGT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCAAAGGAACATGATTaGATTACATCACACAACAGG +
Preference number: 4 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASKEHD*ITSHNR
Trigger: CCTGTTGTGTGATGTAATGCAATCATGTTCCTTTGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTTATTGGTTCCATCTTaGGAAGGGTCTGGGAACTCA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLLVPS*EGSGNS
Trigger: TGAGTTCCCAGACCCTTCCCAAGATGGAACCAATAA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAAATCTTCATATCTGCTaGAAGAATCGCACGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSNLHIC*KNRTPS
Trigger: AGAAGGCGTGCGATTCTTCCAGCAGATATGAAGATT...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGTGGCCTCAAGGCTTTaGATCCTACCATTTGCCACC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSVASRL*ILPFAT
Trigger: GGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCAC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGGAGCTTCTCAATGGTaGCCTCAAGGCTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNGASQW*PQGFGS
Trigger: GGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCTGGACAGTGTGGGATaGTGTTGCAATCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNLDSVG*CCNLSC
Trigger: GCAGGAGAGATTGCAACACCATCCCACACTGTCCAG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNLSVKA*TVWDGV
Trigger: AACACCATCCCACACTGTCCAGGCCTTAACTGAGAG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTTCCAGCTCCATCCATGGTAAATGTGTGCCATaGTGGTTTGCTGCACCTACC +
Preference number: 4 (lower is better)
Translates to: VFSSFVSLLRIMVSSSIHGKCVP*WFAAPT
Trigger: GGTAGGTGCAGCAAACCACCATGGCACACATTTACC...ATGGATGGAGCTGGAAACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAAGCTCTCCCAGCTCTaGATAATCTTCATATCTGCT +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYKLSQL*IIFISA
Trigger: AGCAGATATGAAGATTATTCAGAGCTGGGAGAGCTT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTCGATAAGTTCTTCTTaGAGGACGTGGTACTCAACT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLSISSS*RTWYST
Trigger: AGTTGAGTACCACGTCCTTCAAGAAGAACTTATCGA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTCCACATTTCGTTCATaGGGCGTCTCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNSTFRS*GVSVLT
Trigger: AGTGAGCACAGAGACGCCTCATGAACGAAATGTGGA...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAATTTACACACTTCATATaGAGAAACCTGTGCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQFTHFI*RNLCRG
Trigger: GCCGCGGCACAGGTTTCTGCATATGAAGTGTGTAAA...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp TATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGAGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: YSISDLAQDYQPFPQVNREHAEA*TQRCWN
Trigger: ATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTC...TCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGCCATCTGCGATGTCTaGTTCATCTCCCCAATATGG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNAICDV*FISPIW
Trigger: CCATATTGGGGAGATGAAGCAGACATCGCAGATGGC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTTCTCTGCTGCCATCTaGGATGTCTGCTTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSFSAAI*DVCFIS
Trigger: GGAGATGAAGCAGACATCGCAGATGGCAGCAGAGAA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCATGAGGCGTCTCTGTaGTCACTGAGTGATACCTCA +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNHEASL*SLSDTS
Trigger: TGAGGTATCACTCAGTGAGCACAGAGACGCCTCATG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPITKMV*FGFKVL
Trigger: AAGGACTTTGAATCCAAAGCAAACCATCTTGGTGAT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTAAGAAGCAAAATGCCTaGTACAAAGCTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLKKQNA*YKAETL
Trigger: CAAGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTCTGTTTGCGTAAGCTaGTGTTGGTTTTCTCTAATT +
Preference number: 4 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSVCVS*CWFSLI
Trigger: AATTAGAGAAAACCAACAGCAGCTTACGCAAACAGA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTCAGCTTGCTCTCACTaGTCAGGAGCTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSSACSH*SGASQW
Trigger: CCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNKVSMA*FSLLSL
Trigger: CAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTT...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AATTTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCTGTGCCATGGTGGTTTaGTGCACCTACCAACCCATC +
Preference number: 4 (lower is better)
Translates to: NLYSISDLAQDYQPFPQVCAMVV*CTYQPI
Trigger: GATGGGTTGGTAGGTGCAGCAAACCACCATGGCACA...GACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGAAAGCCGGACTTGCTTaGTTACAGGTTCCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQKAGLA*LQVPFW
Trigger: CCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTGCACTCAAAGATGCTaGAATAGATCAGGGGATCCC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNCTQRC*NRSGDP
Trigger: GGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCAGATACTCTGCCGGTaGACAGCGTCTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNQILCR*TASSLI
Trigger: GATTAAGGAAGACGCTGTCCACCGGCAGAGTATCTG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTGTTTGCTGGGAAACTaGTGTTTAAGGTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLCLLGN*CLRWNC
Trigger: GCAATTCCACCTTAAACACCAGTTTCCCAGCAAACA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCTGGGCAGAGAAGTATaGGTGTGTAGGAAAGGTTCG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNLGREV*VCRKGS
Trigger: CGAACCTTTCCTACACACCCATACTTCTCTGCCCAG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAAGAATCAAGGGCTTATaGCTTCCCAACAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSRIKGL*LPNRLK
Trigger: TTTAAGTCTGTTGGGAAGCCATAAGCCCTTGATTCT...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSLSVKA*TVWDGV
Trigger: AACACCATCCCACACTGTCCAGGCCTTAACTGAGAG...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTTTGATCATCGGCTTTaGACACATAGCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLFDHRL*THSRYS
Trigger: AGAGTATCTGCTATGTGTTCAAAGCCGATGATCAAA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR TCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGAGCAGCAGTATCTGTTaGAGAATAGCCTTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQSSSIC*RIAFCH
Trigger: GTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSEHAEA*TQRCWN
Trigger: ATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTCGATATCTGTGGGCTaGACAATATTGTGTCCGCTA +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNSISVG*TILCPL
Trigger: TAGCGGACACAATATTGTGCAGCCCACAGATATCGA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTAATTCATTCTCTCGCTaGTCATTTCTCGGTCTCAAT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLNSFSR*SFLGLN
Trigger: ATTGAGACCGAGAAATGAGCAGCGAGAGAATGAATT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACTTCCAATATTCTCTaGTGCCATCTGCGATGTCTG +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQTSNIL*CHLRCL
Trigger: CAGACATCGCAGATGGCAGCAGAGAATATTGGAAGT...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAATAATCTTCATATCTaGTGGAAGAATCGCACGCCT +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYNNLHI*WKNRTP
Trigger: AGGCGTGCGATTCTTCCAGCAGATATGAAGATTATT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTCAATAAGAATCGCATaGTGCTGGGAAGTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNSIRIA*CWEVSC
Trigger: GCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGA...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGTTTCTAGGTTTTCATaGTGCAGAATCAAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLVSRFS*CRIKGL
Trigger: TAAGCCCTTGATTCTGCAGCATGAAAACCTAGAAAC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTGAATATCTTGATGTaGCTACTCCTTCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLNILM*LLLLQE
Trigger: TTCTTGCAGAAGGAGTAGGCACATCAAGATATTCAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYPESPR*FALDSK
Trigger: CTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTCATATCAAAGACTCTaGCTACGAATCCCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNSYQRL*LRIPAG
Trigger: TCCCGCTGGGATTCGTAGCCAGAGTCTTTGATATGA...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTACAGTAATCAGGACTaGAGAAGGGACGATTTAGTA +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLYSNQD*RRDDLV
Trigger: TACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTCTGTGCTCACTGAGTaGTACCTCATAAGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNSVLTE*YLISFL
Trigger: AAGGAAACTTATGAGGTATCACTCAGTGAGCACAGA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR TCA 90 bp CTGGTAGGGTCTAAAAGGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTCCATTTCAAATACCTaGTTGATGGTCTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LVGSKRCQLSHKAFTYYDSISNT*LMVFSI
Trigger: GATGGAAAAGACCATCAATCAGGTATTTGAAATGGA...GTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACCTTTTAGACCCTACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAAACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQTQSRT*LVTGSF
Trigger: AAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGT...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGTTAATGTCGTCAGGTaGTTTTGCAGTTCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLVNVVR*FCSSSF
Trigger: AAAACTAGAACTGCAAAAGCACCTGACGACATTAAC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAAGAAGCAAAATGCCTaGTACAAAGCTGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNKKQNA*YKAETL
Trigger: CAAGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTCTGTTTGCGTAAGCTaGTGTTGGTTTTCTCTAATT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLSVCVS*CWFSLI
Trigger: AATTAGAGAAAACCAACAGCAGCTTACGCAAACAGA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTAACTGGTGTTTAAGGTaGAATTGCTCAGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLNWCLR*NCSARN
Trigger: ATTTCTAGCTGAGCAATTCCACCTTAAACACCAGTT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTAGCAACCTCGAGAGCTaGTACATCTGGATCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSSNLES*YIWICK
Trigger: TTTACAGATCCAGATGTACCAGCTCTCGAGGTTGCT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp AATTTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAAATGTGTGCCATGGTaGTTTGCTGCACCTACCAAC +
Preference number: 4 (lower is better)
Translates to: NLYSISDLAQDYQPFPQVKCVPW*FAAPTN
Trigger: GTTGGTAGGTGCAGCAAACCACCATGGCACACATTT...GACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR TCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAATTTGATCATCGGCTTTaGACACATAGCAGATACTCT +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQFDHRL*THSRYS
Trigger: AGAGTATCTGCTATGTGTTCAAAGCCGATGATCAAA...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAACGTCTCTGTGCTCACTaGGTGATACCTCATAAGTTT +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQRLCAH*VIPHKF
Trigger: AAACTTATGAGGTATCACTCAGTGAGCACAGAGACG...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTCGATAAGTTCTTCTTaGAGGACGTGGTACTCAACT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSSISSS*RTWYST
Trigger: AGTTGAGTACCACGTCCTTCAAGAAGAACTTATCGA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACACACAGATGGCTCTTTaGTGGTGTTACTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNTQMAL*WCYLMY
Trigger: GTACATTAAGTAACACCAGCAAAGAGCCATCTGTGT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAATAATCTTCATATCTaGTGGAAGAATCGCACGCCT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNNNLHI*WKNRTP
Trigger: AGGCGTGCGATTCTTCCAGCAGATATGAAGATTATT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGCTGGGAAGTCAGCTaGTTTAAGAGTTCTTTGTAT +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQCWEVS*FKSSLY
Trigger: ATACAAAGAACTCTTAAAGCAGCTGACTTCCCAGCA...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTCTAGGTTTTCATGCTaGAGAATCAAGGGCTTATGG +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSSRFSC*RIKGLW
Trigger: CCATAAGCCCTTGATTCTGCAGCATGAAAACCTAGA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAGTTTCTAGGTTTTCATaGTGCAGAATCAAGGGCTTA +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQVSRFS*CRIKGL
Trigger: TAAGCCCTTGATTCTGCAGCATGAAAACCTAGAAAC...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR GCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAAGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQGQGSV*VSCCWF
Trigger: AAACCAACAGCAGCTTACGCAAACAGAACCTTGACC...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCTTTTCACACACAGATaGCTCTTTGCTGGTGTTACT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNLFTHR*LFAGVT
Trigger: AGTAACACCAGCAAAGAGCCATCTGTGTGTGAAAAG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGCCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAG +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQPESPR*FALDSK
Trigger: CTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGG...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTGTTTGCTGGGAAACTaGTGTTTAAGGTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSCLLGN*CLRWNC
Trigger: GCAATTCCACCTTAAACACCAGTTTCCCAGCAAACA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAGAATCAAGGGCTTATaGCTTCCCAACAGACTTAAA +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNRIKGL*LPNRLK
Trigger: TTTAAGTCTGTTGGGAAGCCATAAGCCCTTGATTCT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR TCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGATGTTTCCTTGCTGTaGATGTTATTGGTTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSDVSLL*MLLVPS
Trigger: AGATGGAACCAATAACATTCACAGCAAGGAAACATC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTACACAGATGGCTCTTTaGTGGTGTTACTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSTQMAL*WCYLMY
Trigger: GTACATTAAGTAACACCAGCAAAGAGCCATCTGTGT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR GCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTAATAATCTTCATATCTaGTGGAAGAATCGCACGCCT +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSNNLHI*WKNRTP
Trigger: AGGCGTGCGATTCTTCCAGCAGATATGAAGATTATT...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTGGTGTTTAAGGTaGAATTGCTCAGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNNWCLR*NCSARN
Trigger: ATTTCTAGCTGAGCAATTCCACCTTAAACACCAGTT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAGAGAGCTGGTACATCTaGATCTGTAAAATAATCATG +
Preference number: 4 (lower is better)
Translates to: SRALPAFEIPPYCECSLQESWYI*ICKIIM
Trigger: CATGATTATTTTACAGATCCAGATGTACCAGCTCTC...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGCAAAAGAAACTCCTATaGAATAGAAGACGTGGTTAC +
Preference number: 4 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQQKKLL*NRRRGY
Trigger: GTAACCACGTCTTCTATTCCATAGGAGTTTCTTTTG...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR TCA 90 bp AACATGTGGTGTTTGGTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTTTCCTAGAAAGGACGTaGTCTCGTTTCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: NMWCLVFSSFVSLLRIMVFLERT*SRFFLW
Trigger: CCATAAAAAGAAACGAGATCACGTCCTTTCTAGGAA...AACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAACCAAACACCACATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR GCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGTTAATGTCGTCAGGTaGTTTTGCAGTTCTAGTTTT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNVNVVR*FCSSSF
Trigger: AAAACTAGAACTGCAAAAGCACCTGACGACATTAAC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR GCA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAAACACAGATGGCTCTTTaGTGGTGTTACTTAATGTAC +
Preference number: 4 (lower is better)
Translates to: LKYQRERSISLDSDQDIQTQMAL*WCYLMY
Trigger: GTACATTAAGTAACACCAGCAAAGAGCCATCTGTGT...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACAACTGGTGTTTAAGGTaGAATTGCTCAGCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNNWCLR*NCSARN
Trigger: ATTTCTAGCTGAGCAATTCCACCTTAAACACCAGTT...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGAGAGCTGGTACATCTaGATCTGTAAAATAATCATG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNESWYI*ICKIIM
Trigger: CATGATTATTTTACAGATCCAGATGTACCAGCTCTC...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTGCGTAAGCTGCTGTTaGTTTTCTCTAATTTATCCA +
Preference number: 4 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSCVSCC*FSLIYP
Trigger: TGGATAAATTAGAGAAAACCAACAGCAGCTTACGCA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CCA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCAAGATGGTTTGCTTTaGATTCAAAGTCCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNQDGLL*IQSPFL
Trigger: CAAAAAGGGACTTTGAATCCAAAGCAAACCATCTTG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CCA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATAGAGAGCTGGTACATCTaGATCTGTAAAATAATCATG +
Preference number: 4 (lower is better)
Translates to: CPIKHLPTMTLINCTYGIESWYI*ICKIIM
Trigger: CATGATTATTTTACAGATCCAGATGTACCAGCTCTC...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS CCA 90 bp CCATCCTGCAGCTCCTTCCTAAAGGCCAGCGAGCGCAGGCCGGGCTaGGAGAAGGACTTGCGCATGGGCCTGCGCACAGGCTCCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PSCSSFLKASERRPG*EKDLRMGLRTGSWL
Trigger: GAGCCAGGAGCCTGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGCCCGGCCTGCGCTCGCTGGCCTTTAGGAAGGAGCTGCAGGATGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS GCA 90 bp TCCTCGAAGGAGCTGAAGAAGCCGCTGCTTCGGAGGCCCCCATCCTaGAGCTCCTTCCTAAAGGCCAGCGAGCGCAGGCCGGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SSKELKKPLLRRPPS*SSFLKASERRPGWE
Trigger: CTCCCAGCCCGGCCTGCGCTCGCTGGCCTTTAGGAAGGAGCTGCAGGATGGGGGCCTCCGAAGCAGCGGCTTCTTCAGCTCCTTCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS-3UTR CAA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCGGGACGCGCAGGTGCTaGGGGGCATCCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLGTRRC*GASWGR
Trigger: CCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCCC...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS TCA 90 bp CTGAAGGCCTGCTGGGGCGACAGCGGAGCTGGCTCTTCTGGGAGATaGCTCTCCGAGTCACTGGACAGGTCCTCCGAGGAGCCGAGGAGC +
Preference number: 5 (lower is better)
Translates to: LKACWGDSGAGSSGR*LSESLDRSSEEPRS
Trigger: GCTCCTCGGCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS CCA 90 bp TCGCCTCCTGAAGGCCTGCTGGGGCGACAGCGGAGCTGGCTCTTCTaGGAGATGACTCTCCGAGTCACTGGACAGGTCCTCCGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SPPEGLLGRQRSWLF*EMTLRVTGQVLRGA
Trigger: GGCTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS GCA 90 bp ACCTCAGCCACAACCCAGGGCAGCATGGGCATGGTGGTCAGGGAATaGACAGGCAGGGAGCCCACCAGCTGCAGGCCAAAATCCACCGAG +
Preference number: 5 (lower is better)
Translates to: TSATTQGSMGMVVRE*TGREPTSCRPKSTE
Trigger: CTCGGTGGATTTTGGCCTGCAGCTGGTGGGCTCCCTGCCTGTGCATTCCCTGACCACCATGCCCATGCTGCCCTGGGTTGTGGCTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CCA 90 bp GGTGTTTGCTCGCCTCCTGAAGGCCTGCTGGGGCGACAGCGGAGCTaGCTCTTCTGGGAGATGACTCTCCGAGTCACTGGACAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: GVCSPPEGLLGRQRS*LFWEMTLRVTGQVL
Trigger: GAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS TCA 90 bp CCTGGCATTCGATGGGGAAGTGACTCAGGGTGTTTGCTCGCCTCCTaGAGGCCTGCTGGGGCGACAGCGGAGCTGGCTCTTCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: PGIRWGSDSGCLLAS*RPAGATAELALLGD
Trigger: ATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS GCA 90 bp TTGTGGAGGTTCCTGGCATTCGATGGGGAAGTGACTCAGGGTGTTTaGTCGCCTCCTGAAGGCCTGCTGGGGCGACAGCGGAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LWRFLAFDGEVTQGV*SPPEGLLGRQRSWL
Trigger: GAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGGAACCTCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
ENST00000513936.6
CDS CCA 90 bp TGTGCGCCACCGTCACGCGGCCGCAGAAGAGCACCTCGAACTTCTTaGAAAACGTGTCGTCGAACTCGGACGGGCAGTGCAGCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: CAPPSRGRRRAPRTS*KTCRRTRTGSAAPP
Trigger: AGGAGGAGCTGCACTGCCCGTCCGAGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCTCTTCTGCGGCCGCGTGACGGTGGCGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCCGGCGGAGCCTTCTaGTGCGCCACCGTCACGCGG +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVAGGAF*CATVTR
Trigger: CCGCGTGACGGTGGCGCACAAGAAGGCTCCGCCGGC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCGCCGGCGGAGCCTTCTaGTGCGCCACCGTCACGCGG +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSAGGAF*CATVTR
Trigger: CCGCGTGACGGTGGCGCACAAGAAGGCTCCGCCGGC...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS GCA 90 bp GAATCGCACGCCTTCTGCGGGGTGGCTACTCGGAGGAATATCTGCTaGCTCCAGGAATGCCTCCGGGTCTTCACAGGAGTCCCACCAGAA +
Preference number: 5 (lower is better)
Translates to: ESHAFCGVATRRNIC*LQECLRVFTGVPPE
Trigger: TTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGCTGGGAGAAGGACTaGCGCATGGGCCTGCGCACA +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLGWEKD*RMGLRT
Trigger: TGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGCC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS GCA 90 bp GTCTGCAGCAGGGCCGACCGCTCCAGTTCTAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTGCTCAGGAGCTTCTCAATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VCSRADRSSSKVSMA*FSLLSLLRSFSMVA
Trigger: GGCCACCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTTAGAACTGGAGCGGTCGGCCCTGCTGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGGGCTGGGAGAAGGACTaGCGCATGGGCCTGCGCACA +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLGWEKD*RMGLRT
Trigger: TGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGCC...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGGGACCCCCGGGCAGGTaGTGGAGGTTCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLGPPGR*WRFLAF
Trigger: GAATGCCAGGAACCTCCACAACCTGCCCGGGGGTCC...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS GCA 90 bp TTCTGCGGGGTGGCTACTCGGAGGAATATCTGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGAGTCCCACCAGAATCACCAAGATGG +
Preference number: 5 (lower is better)
Translates to: FCGVATRRNICCLQE*LRVFTGVPPESPRW
Trigger: CCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
CDS CCA 90 bp GAGGTTCTTCATATCTGCTGGAAGAATCGCACGCCTTCTGCGGGGTaGCTACTCGGAGGAATATCTGCTGCCTCCAGGAATGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: EVLHICWKNRTPSAG*LLGGISAASRNASG
Trigger: CCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTCTTCCAGCAGATATGAAGAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421339.3
CDS CCA 90 bp GCTAGACTTCATATCTGCTGGAAGAATCGCACGCCTTCTGCGGGGTaGCTACTCGGAGGAATATCTGCTGCCTCCAGGAATGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: ARLHICWKNRTPSAG*LLGGISAASRNASG
Trigger: CCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTCTTCCAGCAGATATGAAGTCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469803.1
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAGGGGATCCCACTGTaGACTTCTCCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLQGIPL*TSPWLR
Trigger: CCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCTG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCATCCTCTCACAGAGCTaGTGCAGGCTTTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFILSQS*CRLCRG
Trigger: CCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAGGAT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTGGACCCCCGGGCAGGTaGTGGAGGTTCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSGPPGR*WRFLAF
Trigger: GAATGCCAGGAACCTCCACAACCTGCCCGGGGGTCC...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCACTGGTGGTTCACTGTaGCTTTCCAGGCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLTGGSL*LSRQGF
Trigger: AAAGCCCTGCCTGGAAAGCAACAGTGAACCACCAGT...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS CCA 90 bp TCCTTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCTCCTGCAGAGCTGTCAGTCGCCCGT +
Preference number: 5 (lower is better)
Translates to: SFQRLLSLSVKAWTV*DGVAISPAELSVAR
Trigger: ACGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGATGACGTGGCACACCTaGCCCAACAGCCGAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLMTWHT*PNSRVH
Trigger: ATGCACTCGGCTGTTGGGCAAGGTGTGCCACGTCAT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCGGTGGCCTCAAGGCTTaGGATCCTACCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFGGLKA*DPTICH
Trigger: GTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACC...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCGACATGCCCCCTGAATaGCAAGTTGGAGTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: AEGVVATQTLSEERWTHADMPPE*QVGVRK
Trigger: CTTACGAACTCCAACTTGCAATTCAGGGGGCATGTC...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GGTTCACTGTTGCTTTCCAGGCAGGGCTTTCTTCCTCACCTTCTCCGGCAGCTCGTGTGCCATGGTGGTTaGCTGCACCTACCAACCCAT +
Preference number: 5 (lower is better)
Translates to: GSLLLSRQGFLPHLLRQLVCHGG*LHLPTH
Trigger: ATGGGTTGGTAGGTGCAGCAAACCACCATGGCACAC...GAGCTGCCGGAGAAGGTGAGGAAGAAAGCCCTGCCTGGAAAGCAACAGTGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS GCA 90 bp TTCTGCGGGGTGGCTACTCGGAGGAATATCTGCTGCCTCCAGGAATaGCTCCGGGTCTTCACAGGAGTCCCACCAGAATCAGTTTGTGAA +
Preference number: 5 (lower is better)
Translates to: FCGVATRRNICCLQE*LRVFTGVPPESVCE
Trigger: TTCACAAACTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615497.4
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCCAGGGGATCCCACTGTaGACTTCTCCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSQGIPL*TSPWLR
Trigger: CCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCTG...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCCTCATAAGTTTCCTTaGCGAAACCCCCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLPHKFP*RNPRGP
Trigger: GGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGGTGGCCTCAAGGCTTaGGATCCTACCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLGGLKA*DPTICH
Trigger: GTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS TCA 90 bp CTCAGCCAAGTCCTCCAAATGTCTGCTCTAGGGAGACCCTCATGGTaGGCGATCGGATCTACACGGATCGGATCCACATCCCACAAGATG +
Preference number: 5 (lower is better)
Translates to: LSQVLQMSALGRPSW*AIGSTRIGSTSHKM
Trigger: CATCTTGTGGGATGTGGATCCGATCCGTGTAGATCCGATCGCTCACCATGAGGGTCTCCCTAGAGCAGACATTTGGAGGACTTGGCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS CCA 90 bp AATAATCTTCATATCTGCTGGAAGAATCGCACGCCTTCTGCGGGGTaGCTACTCGGAGGAATATCTGCTGCCTCCAGGAATGCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: NNLHICWKNRTPSAG*LLGGISAASRNASG
Trigger: CCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTCTTCCAGCAGATATGAAGATTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261439.9
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCTCGAGCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAGGGACGCGCAGGTGCTaGGGGGCATCCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: SRALPAFEIPPYCECSLQGTRRC*GASWGR
Trigger: CCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCCC...TTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTCGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGGGACGCGCAGGTGCTaGGGGGCATCCTGGGGACGG +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNGTRRC*GASWGR
Trigger: CCGTCCCCAGGATGCCCCCAAGCACCTGCGCGTCCC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCAGCACCTCGAACTTCTaGGAAAACGTGTCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFSTSNF*ENVSSN
Trigger: GTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCT...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGTGGGCTGCACAATATaGTGTCCGCTAATGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLVGCTI*CPLMRW
Trigger: CCACCTCATTAGCGGACACAATATTGTGCAGCCCAC...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp AGCAGGACAACCGTGAGCAGCATTTTGCTTGTTGAAGGCACAGGTCCTCGTCATATCCTCTCACAGAGCTaGTGCAGGCTTTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SRTTVSSILLVEGTGPRHILSQS*CRLCRG
Trigger: CCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAGGAT...ATGACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGTTGTCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGGTGGCCTCAAGGCTTaGGATCCTACCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVGGLKA*DPTICH
Trigger: GTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAGAGCCAACTGCACCTaGCCAGGGACGCTGAGGGTG +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPRANCT*PGTLRV
Trigger: CACCCTCAGCGTCCCTGGCAAGGTGCAGTTGGCTCT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTGCAGCATTTTGCTTGTaGAAGGCACAGGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: LKAQVLVILREESHCVRPAAFCL*KAQVLV
Trigger: GACGAGGACCTGTGCCTTCAACAAGCAAAATGCTGC...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS GCA 90 bp GAGAAACATACACCTGTGGCTCCTCAGCCAAGTCCTCCAAATGTCTaGTCTAGGGAGACCCTCATGGTGAGCGATCGGATCTACACGGAT +
Preference number: 5 (lower is better)
Translates to: EKHTPVAPQPSPPNV*SRETLMVSDRIYTD
Trigger: ATCCGTGTAGATCCGATCGCTCACCATGAGGGTCTCCCTAGAGCAGACATTTGGAGGACTTGGCTGAGGAGCCACAGGTGTATGTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS CCA 90 bp TTCCTTCTCTCCTTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTaGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCAGAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: FLLSFQRLLSLSVKA*TVWDGVAISPAELS
Trigger: TGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAAGGAGAGAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTGGGCTGCACAATATaGTGTCCGCTAATGAGGTGG +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVVGCTI*CPLMRW
Trigger: CCACCTCATTAGCGGACACAATATTGTGCAGCCCAC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLLKNSL*PQLSEL
Trigger: GAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTACAAAGCTGAGACCTaGGCAATATCCCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFYKAET*AISHFL
Trigger: CAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGTTATCCATTCTTTGGTaGTCACTGAGAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: HWWQHCGLLVKWPGRLTVLSILW*SLRGEE
Trigger: TTCCTCTCCTCTCAGTGACAACCAAAGAATGGATAA...CACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTGACATGCCCCCTGAATaGCAAGTTGGAGTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLDMPPE*QVGVRK
Trigger: CTTACGAACTCCAACTTGCAATTCAGGGGGCATGTC...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTACCGTGAGCAGCATTTaGCTTGTTGAAGGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLTVSSI*LVEGTG
Trigger: ACCTGTGCCTTCAACAAGCAAAATGCTGCTCACGGT...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS TCA 90 bp GGTGAGCGATCGGATCTACACGGATCGGATCCACATCCCACAAGATaGAGGCATCTAGGGAAGCCCCGTGATTATCAGAAGTTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: GERSDLHGSDPHPTR*RHLGKPRDYQKLRR
Trigger: CCTCCTTAACTTCTGATAATCACGGGGCTTCCCTAGATGCCTTCATCTTGTGGGATGTGGATCCGATCCGTGTAGATCCGATCGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS TCA 90 bp CCACAAGTACAGGCAGGCGTCTGCAATCACGACAATGCGCACCTGTaGAGCGTCTCCTCTACGCTTAGCTCTACACTTGGTACTAGAAGT +
Preference number: 5 (lower is better)
Translates to: PQVQAGVCNHDNAHL*SVSSTLSSTLGTRS
Trigger: ACTTCTAGTACCAAGTGTAGAGCTAAGCGTAGAGGAGACGCTTCACAGGTGCGCATTGTCGTGATTGCAGACGCCTGCCTGTACTTGTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492180.1
CDS GCA 90 bp TCAGGTTCACATCTCAGTCCAGAGGGTGAAACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTTCTGGTGGACTGCCTGCTGAGTCTT +
Preference number: 5 (lower is better)
Translates to: SGSHLSPEGETQSRT*LVTGSFLVDCLLSL
Trigger: AAGACTCAGCAGGCAGTCCACCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTTTCACCCTCTGGACTGAGATGTGAACCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CCA 90 bp TCCTCGATATCTGTGGGCTGCACAATATTGTGTCCGCTAATGAGGTaGTTCTCAATGTCGCTCTCCTCGAAGGAGCTGAAGAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: SSISVGCTILCPLMR*FSMSLSSKELKKPL
Trigger: CAGCGGCTTCTTCAGCTCCTTCGAGGAGAGCGACATTGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CCA 90 bp CCCAGAGGCCCACAGTCAGCATCAGTCAATACTCACAACCCAGAGTaGCTGAGGAAGGCAATTCATGAGAAACATACACCTGTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PRGPQSASVNTHNPE*LRKAIHEKHTPVAP
Trigger: AGGAGCCACAGGTGTATGTTTCTCATGAATTGCCTTCCTCAGCCACTCTGGGTTGTGAGTATTGACTGATGCTGACTGTGGGCCTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVQSRTC*VTGSFL
Trigger: CAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCCTCAGGCACTTTTGTTaGATCATCGGCTTTGAACAC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFLRHFC*IIGFEH
Trigger: GTGTTCAAAGCCGATGATCAAACAAAAGTGCCTGAG...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVLKNSL*PQLSEL
Trigger: GAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AGCCACCTGTTTAGGCACTGGTGGCAGCACTGTGGTCTCCTCGTGAAATGGCCGAAGCAGCAGTATCTGTaGAAGAATAGCCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SHLFRHWWQHCGLLVKWPKQQYL*KNSLLP
Trigger: TGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTT...CGGCCATTTCACGAGGAGACCACAGTGCTGCCACCAGTGCCTAAACAGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTGAGGGTGTAGTCGCCACACAAACCCTCTCGGAAGAACGATGGACCCACGCCATCATTTTCAGAGGCTaGGAGCTTCTGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: AEGVVATQTLSEERWTHAIIFRG*ELLIFL
Trigger: AAGGAAAATCAGAAGCTCCAAGCCTCTGAAAATGAT...GGCGTGGGTCCATCGTTCTTCCGAGAGGGTTTGTGTGGCGACTACACCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTACAAAGCTGAGACCTaGGCAATATCCCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLYKAET*AISHFL
Trigger: CAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLRSRFC*RKLLLV
Trigger: AACCAACAGCAGCTTACGCAAACAGAACCTTGACCT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CCCCGTGACAGGCCCCAGTGTGTGTTGTTCTCCTCCCTGTGTCCACGTGTTCTCTCTTCCTTTGTTAGTTaGCTGAGGATAATGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PRDRPQCVLFSSLCPRVLSSFVS*LRIMVS
Trigger: GGAAACCATTATCCTCAGCAAACTAACAAAGGAAGA...GAGAACACGTGGACACAGGGAGGAGAACAACACACACTGGGGCCTGTCACGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS TCA 90 bp ATTACGGTAGGAGATGTTTCGTTCATGAGGCGTCTCTGTGCTCACTaGGTGATACCTCATAAGTTTCCTTTGCGAAACCCCCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: ITVGDVSFMRRLCAH*VIPHKFPLRNPRGP
Trigger: GGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGGTATCACTCAGTGAGCACAGAGACGCCTCATGAACGAAACATCTCCTACCGTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510573.6
CDS CCA 90 bp GAATGCCTCCGGGTCTTCACAGGAGTCCCACCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAGTCCCTCTTTGGCACAGCATTCCCA +
Preference number: 5 (lower is better)
Translates to: ECLRVFTGVPPESPR*FALDSKSLFGTAFP
Trigger: TGGGAATGCTGTGCCAAAGAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443855.5
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAACGCAAAGCCGGACTaGCTTGGTTACAGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSNAKPD*LGYRFL
Trigger: AAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp GCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGAACTTTAAGTCACATGCTGCAGGGGATCCCACTGTaGACTTCTCCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: AQDYQPFPQVNRTLSHMLQGIPL*TSPWLR
Trigger: CCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCTG...CAGCATGTGACTTAAAGTTCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTCAACCAGAGCCTCATTaGTGCACTGAAACACGTAAC +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVQPEPH*CTETRN
Trigger: GTTACGTGTTTCAGTGCACAAATGAGGCTCTGGTTG...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGGACCCCCGGGCAGGTaGTGGAGGTTCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNGPPGR*WRFLAF
Trigger: GAATGCCAGGAACCTCCACAACCTGCCCGGGGGTCC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLKNSL*PQLSEL
Trigger: GAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTC +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSLKNSL*PQLSEL
Trigger: GAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCGAGCTTCAGGCGCTaGTTCAGCAAATCATTTTCA +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSSFRR*FSKSFS
Trigger: TGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTCGAGCTTCAGGCGCTaGTTCAGCAAATCATTTTCA +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLSSFRR*FSKSFS
Trigger: TGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTGCTTTAAGAGTTCTTaGTATGGCACATCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFCFKSS*YGTSFG
Trigger: GCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLRSRFC*RKLLLV
Trigger: AACCAACAGCAGCTTACGCAAACAGAACCTTGACCT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TTGAAGGCACAGGTCCTCGTCATCCTGAGAGAGGAGAGTCACTGTGTGCGACCTTTTGGATCCTACCATTaGCCACCTGCAACTGTTCAA +
Preference number: 5 (lower is better)
Translates to: LKAQVLVILREESHCVRPFGSYH*PPATVQ
Trigger: TTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAA...AGGTCGCACACAGTGACTCTCCTCTCTCAGGATGACGAGGACCTGTGCCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTTTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCACAGCATTCCCACTTaGTTCTCCACTGGAATTATG +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLHSIPT*FSTGIM
Trigger: CATAATTCCAGTGGAGAACAAAGTGGGAATGCTGTG...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS TCA 90 bp TTTGGATTCAAAGTCCTTTCGTTCATGAGGCGTCTCTGTGCTCACTaGGTGATACCTCATAAGTTTCCTTTGCGAAACCCCCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: FGFKVLSFMRRLCAH*VIPHKFPLRNPRGP
Trigger: GGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGGTATCACTCAGTGAGCACAGAGACGCCTCATGAACGAAAGGACTTTGAATCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000446803.6
ENST00000513936.6
CDS GCA 90 bp TTCACAGGAGTCCCACCAGAATCAGTTTGTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAATAGATCAGGGGATCCCACTGTTGAC +
Preference number: 5 (lower is better)
Translates to: FTGVPPESVCEHAEA*TQRCWNRSGDPTVD
Trigger: GTCAACAGTGGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAACTGATTCTGGTGGGACTCCTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615497.4
CDS-3UTR CAA 90 bp GGTAAATGTGTGCCATGGTGGTTTGCTGCACCTACCAACCCATCGCCTAGATATGTTATTGGTTCCATCTaGGGAAGGGTCTGGGAACTC +
Preference number: 5 (lower is better)
Translates to: GKCVPWWFAAPTNPSPRYVIGSI*GRVWEL
Trigger: GAGTTCCCAGACCCTTCCCAAGATGGAACCAATAAC...ATATCTAGGCGATGGGTTGGTAGGTGCAGCAAACCACCATGGCACACATTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAACGCAAAGCCGGACTaGCTTGGTTACAGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLANAKPD*LGYRFL
Trigger: AAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAAGCAGCAGTATCTGTaGAAGAATAGCCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLKQQYL*KNSLLP
Trigger: TGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTT...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACATGACGTGGCACACCTaGCCCAACAGCCGAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYMTWHT*PNSRVH
Trigger: ATGCACTCGGCTGTTGGGCAAGGTGTGCCACGTCAT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTACAAAGCTGAGACCTaGGCAATATCCCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSYKAET*AISHFL
Trigger: CAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCACACTTCCCGCTTCCTTCTTGCGTAAGCTGCTGTaGGTTTTCTCTAATTTATCC +
Preference number: 5 (lower is better)
Translates to: LLAGKPVSSLRSTLPASFLRKLL*VFSNLS
Trigger: GGATAAATTAGAGAAAACCAACAGCAGCTTACGCAA...GAAGGAAGCGGGAAGTGTGCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGTTTGGATCCTACCATTaGCCACCTGCAACTGTTCAA +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLFGSYH*PPATVQ
Trigger: TTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAA...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGCCCCTGAATTGCAAGTaGGAGTTCGTAAGAATCTAC +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLPLNCK*EFVRIY
Trigger: GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGG...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TTCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGAGCTCTTCCAGCTTTaGAAATTCCACCGTATTGTG +
Preference number: 5 (lower is better)
Translates to: FQRLLSLSVKAWTVWDGVELFQL*KFHRIV
Trigger: CACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTC...AACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS TCA 90 bp ATCGGATCCACATCCCACAAGATGAAGGCATCTAGGGAAGCCCCGTaGTTATCAGAAGTTAAGGAGGACTCCAAAGTCACAAAACCCACC +
Preference number: 5 (lower is better)
Translates to: IGSTSHKMKASREAP*LSEVKEDSKVTKPT
Trigger: GGTGGGTTTTGTGACTTTGGAGTCCTCCTTAACTTCTGATAATCACGGGGCTTCCCTAGATGCCTTCATCTTGTGGGATGTGGATCCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCAGCACCTCGAACTTCTaGGAAAACGTGTCGTCGAAC +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPSTSNF*ENVSSN
Trigger: GTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTTGTACCAAGCCAAGGTaGGGTAGCGTGCTTTTTATA +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSCTKPR*GSVLFI
Trigger: TATAAAAAGCACGCTACCCAACCTTGGCTTGGTACA...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTGATCGATAAGTTCTTCTaGAAGGACGTGGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: CPSQLRPGQCGMVLQSLLIDKFF*KDVVLN
Trigger: GTTGAGTACCACGTCCTTCAAGAAGAACTTATCGAT...CAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLARSRFC*RKLLLV
Trigger: AACCAACAGCAGCTTACGCAAACAGAACCTTGACCT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTTTGGATCCTACCATTaGCCACCTGCAACTGTTCAA +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSFGSYH*PPATVQ
Trigger: TTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATTCGTAAGAATCTACTaGCTGGCAAGCCGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAFVRIY*LASRFP
Trigger: AGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCGAGCTCTTCCAGCTTTaGAAATTCCACCGTATTGTG +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSELFQL*KFHRIV
Trigger: CACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTC...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCACAAGATTATCAGCCCTTTCCCCAAGTCAACAGAACTTTAAGTCACATGCTGGCAGCAAGCTTCACGTaGCTGACACTGGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: AQDYQPFPQVNRTLSHMLAASFT*LTLVVH
Trigger: GTGAACCACCAGTGTCAGCAACGTGAAGCTTGCTGC...CAGCATGTGACTTAAAGTTCTGTTGACTTGGGGAAAGGGCTGATAATCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS GCA 90 bp TTGGGTCATGACTGTTGTGAATCAGTTTGTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAATAGATCAGGGGATCCCACTGTTGAC +
Preference number: 5 (lower is better)
Translates to: LGHDCCESVCEHAEA*TQRCWNRSGDPTVD
Trigger: GTCAACAGTGGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAACTGATTCACAACAGTCATGACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
CDS GCA 90 bp GTACTAGACAGGGAGCTATCCAGATCCACACTGATGGAGTGTTCCTaGAGGCCTCTGGCTTTATTACCCCGGGACAAAATACTTTCTAAA +
Preference number: 5 (lower is better)
Translates to: VLDRELSRSTLMECS*RPLALLPRDKILSK
Trigger: TTTAGAAAGTATTTTGTCCCGGGGTAATAAAGCCAGAGGCCTGCAGGAACACTCCATCAGTGTGGATCTGGATAGCTCCCTGTCTAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
CDS-3UTR CAA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTCAGGGGATCCCACTGTaGACTTCTCCCTGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSQGIPL*TSPWLR
Trigger: CCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCTG...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACATCCTCTCACAGAGCTaGTGCAGGCTTTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNILSQS*CRLCRG
Trigger: CCCCCTGCAAAGCCTGCACAAGCTCTGTGAGAGGAT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTCACACAGATGGCTCTTaGCTGGTGTTACTTAATGTA +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSHTDGS*LVLLNV
Trigger: TACATTAAGTAACACCAGCAAAGAGCCATCTGTGTG...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTCCTCATAAGTTTCCTTaGCGAAACCCCCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTPHKFP*RNPRGP
Trigger: GGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGG...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGCCTCATAAGTTTCCTTaGCGAAACCCCCGGGGACCC +
Preference number: 5 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQPHKFP*RNPRGP
Trigger: GGGTCCCCGGGGGTTTCGCAAAGGAAACTTATGAGG...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000510573.6
CDS-3UTR CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGCAATCTAAGCAGCAGTATCTGTaGAAGAATAGCCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: VFCPSQLRPGQCGMVLQSKQQYL*KNSLLP
Trigger: TGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTT...AGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATCGAGCTTCAGGCGCTaGTTCAGCAAATCATTTTCA +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLASSFRR*FSKSFS
Trigger: TGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTATGACGTGGCACACCTaGCCCAACAGCCGAGTGCAT +
Preference number: 5 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTMTWHT*PNSRVH
Trigger: ATGCACTCGGCTGTTGGGCAAGGTGTGCCACGTCAT...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGATGACGTGGCACACCTaGCCCAACAGCCGAGTGCAT +
Preference number: 5 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQMTWHT*PNSRVH
Trigger: ATGCACTCGGCTGTTGGGCAAGGTGTGCCACGTCAT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTGCTTTAAGAGTTCTTaGTATGGCACATCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSCFKSS*YGTSFG
Trigger: GCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TCCAGCGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTTGTCAAACATCAGAAACTaGAGCATTTTAAACGCCTCT +
Preference number: 5 (lower is better)
Translates to: SSVFCPSQLRPGQCGMVLSNIRN*SILNAS
Trigger: AGAGGCGTTTAAAATGCTCAAGTTTCTGATGTTTGA...CAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACGCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AGAACGATGGACCCACGCCTTTGCCTGAGGCATGATCTCGAGCTCTTCCAGCTTTCAAACATCAGAAACTaGAGCATTTTAAACGCCTCT +
Preference number: 5 (lower is better)
Translates to: RTMDPRLCLRHDLELFQLSNIRN*SILNAS
Trigger: AGAGGCGTTTAAAATGCTCAAGTTTCTGATGTTTGA...AAGCTGGAAGAGCTCGAGATCATGCCTCAGGCAAAGGCGTGGGTCCATCGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTTATCCATTCTTTGGTaGTCACTGAGAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLSILW*SLRGEE
Trigger: TTCCTCTCCTCTCAGTGACAACCAAAGAATGGATAA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCATTTGGATCCTACCATTaGCCACCTGCAACTGTTCAA +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAFGSYH*PPATVQ
Trigger: TTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAA...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGGAGCTCTTCCAGCTTTaGAAATTCCACCGTATTGTG +
Preference number: 5 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKELFQL*KFHRIV
Trigger: CACAATACGGTGGAATTTCAAAAGCTGGAAGAGCTC...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS TCA 90 bp TGCATGAAACTGGCCAAGCTAAAACACATCTTCCAGTGTGTTCTATaGGACTCCCAAATGCAACTTCCTGTCCCACTGCACAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: CMKLAKLKHIFQCVL*DSQMQLPVPLHSKT
Trigger: TGTCTTGCTGTGCAGTGGGACAGGAAGTTGCATTTGGGAGTCTCATAGAACACACTGGAAGATGTGTTTTAGCTTGGCCAGTTTCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407365.5
CDS GCA 90 bp CCAATCGTGAAGAGCATAGTTCGATTTTCCTCGATATCTGTGGGCTaGACAATATTGTGTCCGCTAATGAGGTGGTTCTCAATGTCGCTC +
Preference number: 5 (lower is better)
Translates to: PIVKSIVRFSSISVG*TILCPLMRWFSMSL
Trigger: GAGCGACATTGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGAAAATCGAACTATGCTCTTCACGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000491553.1
ENST00000508802.5
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGTTATTGGTTCCATCTaGGGAAGGGTCTGGGAACTC +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYVIGSI*GRVWEL
Trigger: GAGTTCCCAGACCCTTCCCAAGATGGAACCAATAAC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp GGTCTCCTCGTGAAATGGCCGGGGAGACTCACAGTGAGTCTAAGTATGGCAATCTCAAACATCAGAAACTaGAGCATTTTAAACGCCTCT +
Preference number: 5 (lower is better)
Translates to: GLLVKWPGRLTVSLSMAISNIRN*SILNAS
Trigger: AGAGGCGTTTAAAATGCTCAAGTTTCTGATGTTTGA...GATTGCCATACTTAGACTCACTGTGAGTCTCCCCGGCCATTTCACGAGGAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGAGAAGCTTGCGTAAGCTGCTGTaGGTTTTCTCTAATTTATCC +
Preference number: 5 (lower is better)
Translates to: VGVRKNLLAGKPVSSLRSLRKLL*VFSNLS
Trigger: GGATAAATTAGAGAAAACCAACAGCAGCTTACGCAA...GCTTCTCAGGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCCCCCTGAATTGCAAGTaGGAGTTCGTAAGAATCTAC +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPPLNCK*EFVRIY
Trigger: GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGG...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACGACATGCCCCCTGAATaGCAAGTTGGAGTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYDMPPE*QVGVRK
Trigger: CTTACGAACTCCAACTTGCAATTCAGGGGGCATGTC...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGACATGCCCCCTGAATaGCAAGTTGGAGTTCGTAAG +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLDMPPE*QVGVRK
Trigger: CTTACGAACTCCAACTTGCAATTCAGGGGGCATGTC...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGAGATCCATTTCACTaGACAGTGATCAGGATATCC +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLARDPFH*TVIRIS
Trigger: GGATATCCTGATCACTGTCAAGTGAAATGGATCTCT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS GCA 90 bp GAAGTCAGCTGCTTTAAGAGTTCTTTGTATGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGGTGTTTAAGGTGGAATTGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: EVSCFKSSLYGTSFG*CLLGNWCLRWNCSA
Trigger: AGCTGAGCAATTCCACCTTAAACACCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCAGCTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAATCATTTTCAGAGGCTaGGAGCTTCTGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GTCPLNCKLEFVRIYLLAIIFRG*ELLIFL
Trigger: AAGGAAAATCAGAAGCTCCAAGCCTCTGAAAATGAT...TGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp ACTGCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCATCGAGCTTCAGGCGCTaGTTCAGCAAATCATTTTCA +
Preference number: 5 (lower is better)
Translates to: TAQNPIFVRKQPTLKCTSSSFRR*FSKSFS
Trigger: TGAAAATGATTTGCTGAACAAGCGCCTGAAGCTCGA...TGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTGCTTTAAGAGTTCTTaGTATGGCACATCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPCFKSS*YGTSFG
Trigger: GCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCACAGAACCCCATCTTTGTGAGAAAGCAACCCACTCTTAAGTGCACATCAGAGATCGATAAGTTCTTCTaGAAGGACGTGGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: AQNPIFVRKQPTLKCTSEIDKFF*KDVVLN
Trigger: GTTGAGTACCACGTCCTTCAAGAAGAACTTATCGAT...CTCTGATGTGCACTTAAGAGTGGGTTGCTTTCTCACAAAGATGGGGTTCTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCTTATCCATTCTTTGGTaGTCACTGAGAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPLSILW*SLRGEE
Trigger: TTCCTCTCCTCTCAGTGACAACCAAAGAATGGATAA...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CAACCCACTCTTAAGTGCACATCAGAGAGGCTTTACACAGTGACTGGCTGCAAGTTGCGTAAGCTGCTGTaGGTTTTCTCTAATTTATCC +
Preference number: 5 (lower is better)
Translates to: QPTLKCTSERLYTVTGCKLRKLL*VFSNLS
Trigger: GGATAAATTAGAGAAAACCAACAGCAGCTTACGCAA...CTTGCAGCCAGTCACTGTGTAAAGCCTCTCTGATGTGCACTTAAGAGTGGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTT +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYRSRFC*RKLLLV
Trigger: AACCAACAGCAGCTTACGCAAACAGAACCTTGACCT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTGGTGGCCTCAAGGCTTaGGATCCTACCATTTGCCAC +
Preference number: 5 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSGGLKA*DPTICH
Trigger: GTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACC...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AATTTATATTCCATCAGTGATTTAGCACAAGATTATCAGCCCTTTCCCCAAGTCAGGCCCCAGTGTGTGTaGTTCTCCTCCCTGTGTCCA +
Preference number: 5 (lower is better)
Translates to: NLYSISDLAQDYQPFPQVRPQCV*FSSLCP
Trigger: TGGACACAGGGAGGAGAACAACACACACTGGGGCCT...GACTTGGGGAAAGGGCTGATAATCTTGTGCTAAATCACTGATGGAATATAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS CCA 90 bp GAATGCCTCCGGGTCTTCACAGGAGTCCCACCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAGTCCCTTTTTGTGTTCATAAAATCA +
Preference number: 5 (lower is better)
Translates to: ECLRVFTGVPPESPR*FALDSKSLFVFIKS
Trigger: TGATTTTATGAACACAAAAAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCGGAGGCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
CDS CCA 90 bp GGAGAGACAGGAAATGTTTCCCCTCTAATAAGAGAAGGCTGGTTCTaGCAAACAGATTTACTAATGCTCACCAAAGACTCTGGCTACGAA +
Preference number: 5 (lower is better)
Translates to: GETGNVSPLIREGWF*QTDLLMLTKDSGYE
Trigger: TTCGTAGCCAGAGTCTTTGGTGAGCATTAGTAAATCTGTTTGCCAGAACCAGCCTTCTCTTATTAGAGGGGAAACATTTCCTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS-3UTR CAA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTQSRTC*VTGSFL
Trigger: CAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTG...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACGCAAAGCCGGACTaGCTTGGTTACAGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNNAKPD*LGYRFL
Trigger: AAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTT...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTCTCAGGCACTTTTGTTaGATCATCGGCTTTGAACAC +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLRHFC*IIGFEH
Trigger: GTGTTCAAAGCCGATGATCAAACAAAAGTGCCTGAG...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261439.9
ENST00000508802.5
CDS-3UTR CAA 90 bp AATTGCAAGTTGGAGTTCGTAAGAATCTACTTGCTGGCAAGCCGGTTTCCTCCCATCATTTTCAGAGGCTaGGAGCTTCTGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: NCKLEFVRIYLLASRFPPIIFRG*ELLIFL
Trigger: AAGGAAAATCAGAAGCTCCAAGCCTCTGAAAATGAT...GGGAGGAAACCGGCTTGCCAGCAAGTAGATTCTTACGAACTCCAACTTGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTGTATGGCACATCCTTaGGCTGCTGTTTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTCMAHP*AAVCWE
Trigger: TTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACA...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTGTACCAAGCCAAGGTaGGGTAGCGTGCTTTTTATA +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLCTKPR*GSVLFI
Trigger: TATAAAAAGCACGCTACCCAACCTTGGCTTGGTACA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCCCCTGAATTGCAAGTaGGAGTTCGTAAGAATCTAC +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYPLNCK*EFVRIY
Trigger: GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACGGTAGGAGATGCTCTTaGGCACAGCATTCCCACTTT +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNGRRCS*AQHSHF
Trigger: AAAGTGGGAATGCTGTGCCAAAGAGCATCTCCTACC...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508802.5
CDS-3UTR CAA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNQSRTC*VTGSFL
Trigger: CAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTG...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000615497.4
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACCCAAGATGGTTTGCTTaGGATTCAAAGTCCTTTCGT +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYPRWFA*DSKSFR
Trigger: ACGAAAGGACTTTGAATCCAAAGCAAACCATCTTGG...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACAAGCAGCAGTATCTGTaGAAGAATAGCCTTTTGCCA +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYKQQYL*KNSLLP
Trigger: TGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp ACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACAACTGTATGGCACATCCTTaGGCTGCTGTTTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: TVYSNQDWRRDDLVSKNNCMAHP*AAVCWE
Trigger: TTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACA...GTTGTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTGTATGGCACATCCTTaGGCTGCTGTTTGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: LFQLLKFHRIVNALYKHSCMAHP*AAVCWE
Trigger: TTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACA...ACTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTGCTTTAAGAGTTCTTaGTATGGCACATCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLCFKSS*YGTSFG
Trigger: GCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GGTGTCAGCTGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTACAAAGCTGAGACCTaGGCAATATCCCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: GVSCPIKHLPTMTLINCTYKAET*AISHFL
Trigger: CAGGAAGTGGGATATTGCCAAGGTCTCAGCTTTGTA...AGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACAGCTGACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp AAAAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACATCGATAAGTTCTTCTaGAAGGACGTGGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: KNTGTCPLNCKLEFVRIYIDKFF*KDVVLN
Trigger: GTTGAGTACCACGTCCTTCAAGAAGAACTTATCGAT...GTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTTTATCCATTCTTTGGTaGTCACTGAGAGGAGAGGAA +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLLSILW*SLRGEE
Trigger: TTCCTCTCCTCTCAGTGACAACCAAAGAATGGATAA...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATACAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: CPIKHLPTMTLINCTYGIQCGMV*QSLLQS
Trigger: GCTCTGCAGGAGAGATTGCAACACCATCCCACACTG...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS GCA 90 bp TACCATTTGCCACCTGCAACTGTTCAAGGAGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTTTCTCTAATTTATCCATTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: YHLPPATVQGGQGSV*VSCCWFSLIYPFFG
Trigger: ACCAAAGAATGGATAAATTAGAGAAAACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp AACATGTGGTGTTTGGTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: NMWCLVFSSFVSLLRIMVQSRTC*VTGSFL
Trigger: CAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTG...AACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAACCAAACACCACATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CAA 90 bp AACATGTGGTGTTTGGTTTTCTCTTCCTTTGTTAGTTTGCTGAGGATAATGGTTAACGCAAAGCCGGACTaGCTTGGTTACAGGTTCCTT +
Preference number: 5 (lower is better)
Translates to: NMWCLVFSSFVSLLRIMVNAKPD*LGYRFL
Trigger: AAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTT...AACCATTATCCTCAGCAAACTAACAAAGGAAGAGAAAACCAAACACCACATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS-3UTR CAA 90 bp AAACACTGGGACATGCCCCCTGAATTGCAAGTTGGAGTTCGTAAGAATCTACTTATCATTTTCAGAGGCTaGGAGCTTCTGATTTTCCTT +
Preference number: 5 (lower is better)
Translates to: KHWDMPPELQVGVRKNLLIIFRG*ELLIFL
Trigger: AAGGAAAATCAGAAGCTCCAAGCCTCTGAAAATGAT...AAGTAGATTCTTACGAACTCCAACTTGCAATTCAGGGGGCATGTCCCAGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp CTTAAATACCAAAGAGAGAGATCCATTTCACTTGACAGTGATCAGGATATCCAACAACCAGAGCCTCATTaGTGCACTGAAACACGTAAC +
Preference number: 5 (lower is better)
Translates to: LKYQRERSISLDSDQDIQQPEPH*CTETRN
Trigger: GTTACGTGTTTCAGTGCACAAATGAGGCTCTGGTTG...TTGGATATCCTGATCACTGTCAAGTGAAATGGATCTCTCTCTTTGGTATTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACCACACAGATGGCTCTTaGCTGGTGTTACTTAATGTA +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNHTDGS*LVLLNV
Trigger: TACATTAAGTAACACCAGCAAAGAGCCATCTGTGTG...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
CDS-3UTR CAA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGATCGATAAGTTCTTCTaGAAGGACGTGGTACTCAAC +
Preference number: 5 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQIDKFF*KDVVLN
Trigger: GTTGAGTACCACGTCCTTCAAGAAGAACTTATCGAT...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTTGCGTAAGCTGCTGTaGGTTTTCTCTAATTTATCC +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNLRKLL*VFSNLS
Trigger: GGATAAATTAGAGAAAACCAACAGCAGCTTACGCAA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTACTGTGTACAGTAATCAGGACTGGAGAAGGGACGATTTAGTATCTAAAAACTCAAACATCAGAAACTaGAGCATTTTAAACGCCTCT +
Preference number: 5 (lower is better)
Translates to: ATVYSNQDWRRDDLVSKNSNIRN*SILNAS
Trigger: AGAGGCGTTTAAAATGCTCAAGTTTCTGATGTTTGA...GTTTTTAGATACTAAATCGTCCCTTCTCCAGTCCTGATTACTGTACACAGTAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS-3UTR CAA 90 bp GCTCTTCCAGCTTTTGAAATTCCACCGTATTGTGAATGCTCTTTACAAACACAGTTACCTACTATGACTTaGATCAACTGTACTTATGGG +
Preference number: 5 (lower is better)
Translates to: ALPAFEIPPYCECSLQTQLPTMT*INCTYG
Trigger: CCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAA...CTGTGTTTGTAAAGAGCATTCACAATACGGTGGAATTTCAAAAGCTGGAAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS-3UTR CAA 90 bp TGTCCCATAAAGCATTTACCTACTATGACTTTGATCAACTGTACTTATGGGATACACACAGATGGCTCTTaGCTGGTGTTACTTAATGTA +
Preference number: 5 (lower is better)
Translates to: CPIKHLPTMTLINCTYGIHTDGS*LVLLNV
Trigger: TACATTAAGTAACACCAGCAAAGAGCCATCTGTGTG...TATCCCATAAGTACAGTTGATCAAAGTCATAGTAGGTAAATGCTTTATGGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261439.9
CDS TCA 72 bp GGGCGGGGGCTCTCGGACCCCCGGCTGCCGCTGACGTaGTTGAACTTCTCGATGCACTCGTCGATCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GRGLSDPRLPLT*LNFSMHSSIRA
Trigger: GGCCCTGATCGACGAGTGCATCGAGAAGTTCAATCACGTCAGCGGCAGCCGGGGGTCCGAGAGCCCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CCA 72 bp AGCTCCTTCCTAAAGGCCAGCGAGCGCAGGCCGGGCTaGGAGAAGGACTTGCGCATGGGCCTGCGCACAGGC +
Preference number: 6 (lower is better)
Translates to: SSFLKASERRPG*EKDLRMGLRTG
Trigger: GCCTGTGCGCAGGCCCATGCGCAAGTCCTTCTCCCAGCCCGGCCTGCGCTCGCTGGCCTTTAGGAAGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CAA 72 bp TCGATGCACTCGTCGATCAGGGCCGGCGGAGCCTTCTaGTGCGCCACCGTCACGCGGCCGCAGAAGAGCACC +
Preference number: 6 (lower is better)
Translates to: SMHSSIRAGGAF*CATVTRPQKST
Trigger: GGTGCTCTTCTGCGGCCGCGTGACGGTGGCGCACAAGAAGGCTCCGCCGGCCCTGATCGACGAGTGCATCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS GCA 72 bp GAGCTGAAGAAGCCGCTGCTTCGGAGGCCCCCATCCTaGAGCTCCTTCCTAAAGGCCAGCGAGCGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: ELKKPLLRRPPS*SSFLKASERRP
Trigger: CGGCCTGCGCTCGCTGGCCTTTAGGAAGGAGCTGCAGGATGGGGGCCTCCGAAGCAGCGGCTTCTTCAGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS TCA 72 bp CAGTGCAGCTCCTCCTGCCGGGCGATCTTCCCCGCCTaGCGGATGGAGCTGATGATCTCAGGCACCTTGGCC +
Preference number: 6 (lower is better)
Translates to: QCSSSCRAIFPA*RMELMISGTLA
Trigger: GGCCAAGGTGCCTGAGATCATCAGCTCCATCCGTCAGGCGGGGAAGATCGCCCGGCAGGAGGAGCTGCACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446803.6
CDS GCA 72 bp CCCTCACACAGCTGGGCTGGCGCCTTAGCTGTCTGCTaGACTGCGGCCACCGTGAAGGCCTGTTTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: PSHSWAGALAVC*TAATVKACFRV
Trigger: GACCCTGAAACAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
CDS GCA 72 bp CAGCCCTCACACAGCTGGGCTGGCGCCTTAGCTGTCTaGTGCACTGCGGCCACCGTGAAGGCCTGTTTCAGG +
Preference number: 6 (lower is better)
Translates to: QPSHSWAGALAV*CTAATVKACFR
Trigger: CCTGAAACAGGCCTTCACGGTGGCCGCAGTGCAGCAGACAGCTAAGGCGCCAGCCCAGCTGTGTGAGGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
CDS GCA 72 bp GGCCTGGACAGTGTGGGATGGTGTTGCAATCTCTCCTaGAGAGCTGTCAGTCGCCCGTGGGCTCGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: GLDSVGWCCNLS*RAVSRPWARAA
Trigger: CGCAGCCCGAGCCCACGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS TCA 72 bp TGCTGGGGCGACAGCGGAGCTGGCTCTTCTGGGAGATaGCTCTCCGAGTCACTGGACAGGTCCTCCGAGGAG +
Preference number: 6 (lower is better)
Translates to: CWGDSGAGSSGR*LSESLDRSSEE
Trigger: CTCCTCGGAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS TCA 72 bp CGATGGGGAAGTGACTCAGGGTGTTTGCTCGCCTCCTaGAGGCCTGCTGGGGCGACAGCGGAGCTGGCTCTT +
Preference number: 6 (lower is better)
Translates to: RWGSDSGCLLAS*RPAGATAELAL
Trigger: AAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS CCA 72 bp GAAGGCCTGCTGGGGCGACAGCGGAGCTGGCTCTTCTaGGAGATGACTCTCCGAGTCACTGGACAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: EGLLGRQRSWLF*EMTLRVTGQVL
Trigger: GAGGACCTGTCCAGTGACTCGGAGAGTCATCTCCCAGAAGAGCCAGCTCCGCTGTCGCCCCAGCAGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
ENST00000513936.6
CDS CAA 90 bp TTGTGCGCCACCGTCACGCGGCCGCAGAAGAGCACCTCGAACTTCTaGGAAAACGTGTCGTCGAACTCGGACGGGCAGTGCAGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LCATVTRPQKSTSNF*ENVSSNSDGQCSSS
Trigger: GGAGGAGCTGCACTGCCCGTCCGAGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCTCTTCTGCGGCCGCGTGACGGTGGCGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS GCA 72 bp TTCCTGGCATTCGATGGGGAAGTGACTCAGGGTGTTTaGTCGCCTCCTGAAGGCCTGCTGGGGCGACAGCGG +
Preference number: 6 (lower is better)
Translates to: FLAFDGEVTQGV*SPPEGLLGRQR
Trigger: CCGCTGTCGCCCCAGCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
ENST00000513936.6
CDS GCA 72 bp GCCTTCTGCGGGGTGGCTACTCGGAGGAATATCTGCTaGCTCCAGGAATGCCTCCGGGTCTTCACAGGAGTC +
Preference number: 6 (lower is better)
Translates to: AFCGVATRRNIC*LQECLRVFTGV
Trigger: GACTCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS GCA 72 bp CACGCCTTCTGCGGGGTGGCTACTCGGAGGAATATCTaGTGCCTCCAGGAATGCCTCCGGGTCTTCACAGGA +
Preference number: 6 (lower is better)
Translates to: HAFCGVATRRNI*CLQECLRVFTG
Trigger: TCCTGTGAAGACCCGGAGGCATTCCTGGAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CCA 72 bp CCGTCACGCGGCCGCAGAAGAGCACCTCGAACTTCTTaGAAAACGTGTCGTCGAACTCGGACGGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: PSRGRRRAPRTS*KTCRRTRTGSA
Trigger: TGCACTGCCCGTCCGAGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCTCTTCTGCGGCCGCGTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CAA 72 bp ACCGTCACGCGGCCGCAGAAGAGCACCTCGAACTTCTaGGAAAACGTGTCGTCGAACTCGGACGGGCAGTGC +
Preference number: 6 (lower is better)
Translates to: TVTRPQKSTSNF*ENVSSNSDGQC
Trigger: GCACTGCCCGTCCGAGTTCGACGACACGTTTTCCAAGAAGTTCGAGGTGCTCTTCTGCGGCCGCGTGACGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CAA 90 bp GTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGCTGTCAGTCGCCCGTGGGCTCGGGC +
Preference number: 6 (lower is better)
Translates to: VFCPSQLRPGQCGMV*QSLLQSCQSPVGSG
Trigger: GCCCGAGCCCACGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS TCA 72 bp GCAGGTTGTGGAGGTTCCTGGCATTCGATGGGGAAGTaGCTCAGGGTGTTTGCTCGCCTCCTGAAGGCCTGC +
Preference number: 6 (lower is better)
Translates to: AGCGGSWHSMGK*LRVFARLLKAC
Trigger: GCAGGCCTTCAGGAGGCGAGCAAACACCCTGAGTCACTTCCCCATCGAATGCCAGGAACCTCCACAACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000510573.6
ENST00000513936.6
CDS TCA 72 bp GCTTGGTTACAGGTTCCTTTCTGGTGGACTGCCTGCTaGGTCTTCGCACCTCAGCCACAACCCAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AWLQVPFWWTAC*VFAPQPQPRAA
Trigger: TGCTGCCCTGGGTTGTGGCTGAGGTGCGAAGACTCAGCAGGCAGTCCACCAGAAAGGAACCTGTAACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CAA 72 bp CCCTCTCAGTTAAGGCCTGGACAGTGTGGGATGGTGTaGCAATCTCTCCTGCAGAGCTGTCAGTCGCCCGTG +
Preference number: 6 (lower is better)
Translates to: PSQLRPGQCGMV*QSLLQSCQSPV
Trigger: CACGGGCGACTGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 90 bp AGGGCCGACCGCTCCAGTTCTAAGGTAAGCATGGCCTGCTTCAGCTaGCTCTCACTGCTCAGGAGCTTCTCAATGGTGGCCTCAAGGCTT +
Preference number: 6 (lower is better)
Translates to: RADRSSSKVSMACFS*LSLLRSFSMVASRL
Trigger: AAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTTAGAACTGGAGCGGTCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS GCA 72 bp AGGGCCGACCGCTCCAGTTCTAAGGTAAGCATGGCCTaGTTCAGCTTGCTCTCACTGCTCAGGAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: RADRSSSKVSMA*FSLLSLLRSFS
Trigger: TGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGAAGCAGGCCATGCTTACCTTAGAACTGGAGCGGTCGGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS GCA 72 bp GCCCCTCAAGAGATCTTGCAGGTGGTCCCTGTACGGTaGTGTGAGAAACCCCATCCCATCTCAAGAGTGTCC +
Preference number: 6 (lower is better)
Translates to: APQEILQVVPVR*CEKPHPISRVS
Trigger: GGACACTCTTGAGATGGGATGGGGTTTCTCACAGCACCGTACAGGGACCACCTGCAAGATCTCTTGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS TCA 72 bp GTCCTCCAAATGTCTGCTCTAGGGAGACCCTCATGGTaGGCGATCGGATCTACACGGATCGGATCCACATCC +
Preference number: 6 (lower is better)
Translates to: VLQMSALGRPSW*AIGSTRIGSTS
Trigger: GGATGTGGATCCGATCCGTGTAGATCCGATCGCTCACCATGAGGGTCTCCCTAGAGCAGACATTTGGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS TCA 72 bp CAGGCAGGCGTCTGCAATCACGACAATGCGCACCTGTaGAGCGTCTCCTCTACGCTTAGCTCTACACTTGGT +
Preference number: 6 (lower is better)
Translates to: QAGVCNHDNAHL*SVSSTLSSTLG
Trigger: ACCAAGTGTAGAGCTAAGCGTAGAGGAGACGCTTCACAGGTGCGCATTGTCGTGATTGCAGACGCCTGCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492180.1
CDS GCA 72 bp GGTTCTTCATATCTGCTGGAAGAATCGCACGCCTTCTaGGGGGTGGCTACTCGGAGGAATATCTGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GSSYLLEESHAF*GVATRRNICCL
Trigger: GAGGCAGCAGATATTCCTCCGAGTAGCCACCCCGCAGAAGGCGTGCGATTCTTCCAGCAGATATGAAGAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421339.3
CDS CAA 72 bp CTCAGTCCAGAGGGTGAAACGCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTGGTGGACTGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSPEGETQSRTC*VTGSFLVDCLL
Trigger: CAGCAGGCAGTCCACCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTTTCACCCTCTGGACTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CAA 90 bp GGTTCACATCTCAGTCCAGAGGGTGAAACGCAAAGCCGGACTTGCTaGGTTACAGGTTCCTTTCTGGTGGACTGCCTGCTGAGTCTTCGC +
Preference number: 6 (lower is better)
Translates to: GSHLSPEGETQSRTC*VTGSFLVDCLLSLR
Trigger: GCGAAGACTCAGCAGGCAGTCCACCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTTTCACCCTCTGGACTGAGATGTGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS GCA 72 bp CATCTCAGTCCAGAGGGTGAAACGCAAAGCCGGACTTaGTTGGTTACAGGTTCCTTTCTGGTGGACTGCCTG +
Preference number: 6 (lower is better)
Translates to: HLSPEGETQSRT*LVTGSFLVDCL
Trigger: CAGGCAGTCCACCAGAAAGGAACCTGTAACCAAGCAAGTCCGGCTTTGCGTTTCACCCTCTGGACTGAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS GCA 72 bp CAGGGATGTGTTTTTCACAAGCCCCTCAAGAGATCTTaGAGGTGGTCCCTGTACGGTGCTGTGAGAAACCCC +
Preference number: 6 (lower is better)
Translates to: QGCVFHKPLKRS*RWSLYGAVRNP
Trigger: GGGGTTTCTCACAGCACCGTACAGGGACCACCTGCAAGATCTCTTGAGGGGCTTGTGAAAAACACATCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS CCA 72 bp CGTCTTCTGTCCCTCTCAGTTAAGGCCTGGACAGTGTaGGATGGTGTTGCAATCTCTCCTGCAGAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RLLSLSVKAWTV*DGVAISPAELS
Trigger: TGACAGCTCTGCAGGAGAGATTGCAACACCATCCCACACTGTCCAGGCCTTAACTGAGAGGGACAGAAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000406664.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CCA 72 bp CTGCTCAGGAGCTTCTCAATGGTGGCCTCAAGGCTTTaGATCCTACCATTTGCCACCTGCAACTGTTCAAGG +
Preference number: 6 (lower is better)
Translates to: LLRSFSMVASRL*ILPFATCNCSR
Trigger: CCTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CCA 72 bp TCAGCTTGCTCTCACTGCTCAGGAGCTTCTCAATGGTaGCCTCAAGGCTTTGGATCCTACCATTTGCCACCT +
Preference number: 6 (lower is better)
Translates to: SACSHCSGASQW*PQGFGSYHLPP
Trigger: AGGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CCA 72 bp GCTTCAGCTTGCTCTCACTGCTCAGGAGCTTCTCAATaGTGGCCTCAAGGCTTTGGATCCTACCATTTGCCA +
Preference number: 6 (lower is better)
Translates to: ASACSHCSGASQ*WPQGFGSYHLP
Trigger: TGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAGTGAGAGCAAGCTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 72 bp TCAGGGATGTGTTTTTCACAAGCCCCTCAAGAGATCTaGCAGGTGGTCCCTGTACGGTGCTGTGAGAAACCC +
Preference number: 6 (lower is better)
Translates to: SGMCFSQAPQEI*QVVPVRCCEKP
Trigger: GGGTTTCTCACAGCACCGTACAGGGACCACCTGCAAGATCTCTTGAGGGGCTTGTGAAAAACACATCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS TCA 72 bp TCGGATCTACACGGATCGGATCCACATCCCACAAGATaGAGGCATCTAGGGAAGCCCCGTGATTATCAGAAG +
Preference number: 6 (lower is better)
Translates to: SDLHGSDPHPTR*RHLGKPRDYQK
Trigger: CTTCTGATAATCACGGGGCTTCCCTAGATGCCTTCATCTTGTGGGATGTGGATCCGATCCGTGTAGATCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS GCA 72 bp AGGGAGCTATCCAGATCCACACTGATGGAGTGTTCCTaGAGGCCTCTGGCTTTATTACCCCGGGACAAAATA +
Preference number: 6 (lower is better)
Translates to: RELSRSTLMECS*RPLALLPRDKI
Trigger: TATTTTGTCCCGGGGTAATAAAGCCAGAGGCCTGCAGGAACACTCCATCAGTGTGGATCTGGATAGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261439.9
ENST00000443855.5
ENST00000446803.6
ENST00000508802.5
ENST00000509761.1
ENST00000510573.6
CDS GCA 72 bp GTCCCACCAGAATCAGTTTGTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAATAGATCAGGGGATCCC +
Preference number: 6 (lower is better)
Translates to: VPPESVCEHAEA*TQRCWNRSGDP
Trigger: GGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAACTGATTCTGGTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615497.4
CDS CCA 72 bp TCTGTGGGCTGCACAATATTGTGTCCGCTAATGAGGTaGTTCTCAATGTCGCTCTCCTCGAAGGAGCTGAAG +
Preference number: 6 (lower is better)
Translates to: SVGCTILCPLMR*FSMSLSSKELK
Trigger: CTTCAGCTCCTTCGAGGAGAGCGACATTGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS CAA 72 bp CTCAAAGATGCTGGAATAGATCAGGGGATCCCACTGTaGACTTCTCCCTGGCTCAGGTTCACATCTCAGTCC +
Preference number: 6 (lower is better)
Translates to: LKDAGIDQGIPL*TSPWLRFTSQS
Trigger: GGACTGAGATGTGAACCTGAGCCAGGGAGAAGTCAACAGTGGGATCCCCTGATCTATTCCAGCATCTTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CAA 72 bp ACTGCTCAGGAGCTTCTCAATGGTGGCCTCAAGGCTTaGGATCCTACCATTTGCCACCTGCAACTGTTCAAG +
Preference number: 6 (lower is better)
Translates to: TAQELLNGGLKA*DPTICHLQLFK
Trigger: CTTGAACAGTTGCAGGTGGCAAATGGTAGGATCCAAAGCCTTGAGGCCACCATTGAGAAGCTCCTGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CCA 72 bp GTTTGTGAACACGCTGAGGCTTGCACTCAAAGATGCTaGAATAGATCAGGGGATCCCACTGTTGACTTCTCC +
Preference number: 6 (lower is better)
Translates to: VCEHAEACTQRC*NRSGDPTVDFS
Trigger: GGAGAAGTCAACAGTGGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS CCA 72 bp CGGGTCTTCACAGGAGTCCCACCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAGTCCCTCTTTGGCACA +
Preference number: 6 (lower is better)
Translates to: RVFTGVPPESPR*FALDSKSLFGT
Trigger: TGTGCCAAAGAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443855.5
CDS TCA 72 bp CTGGCCAAGCTAAAACACATCTTCCAGTGTGTTCTATaGGACTCCCAAATGCAACTTCCTGTCCCACTGCAC +
Preference number: 6 (lower is better)
Translates to: LAKLKHIFQCVL*DSQMQLPVPLH
Trigger: GTGCAGTGGGACAGGAAGTTGCATTTGGGAGTCTCATAGAACACACTGGAAGATGTGTTTTAGCTTGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407365.5
CDS GCA 72 bp TCAGTTTGTGAACACGCTGAGGCTTGCACTCAAAGATaGTGGAATAGATCAGGGGATCCCACTGTTGACTTC +
Preference number: 6 (lower is better)
Translates to: SVCEHAEACTQR*WNRSGDPTVDF
Trigger: GAAGTCAACAGTGGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
ENST00000615497.4
CDS GCA 72 bp GACTGTTGTGAATCAGTTTGTGAACACGCTGAGGCTTaGACTCAAAGATGCTGGAATAGATCAGGGGATCCC +
Preference number: 6 (lower is better)
Translates to: DCCESVCEHAEA*TQRCWNRSGDP
Trigger: GGGATCCCCTGATCTATTCCAGCATCTTTGAGTGCAAGCCTCAGCGTGTTCACAAACTGATTCACAACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000402522.1
ENST00000508802.5
CDS CCA 72 bp CAGGAGTCCCACCAGAATCACCAAGATGGTTTGCTTTaGATTCAAAGTCCTTTCGTTCATGAGGCGTCTCTG +
Preference number: 6 (lower is better)
Translates to: QESHQNHQDGLL*IQSPFVHEASL
Trigger: CAGAGACGCCTCATGAACGAAAGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000446803.6
CDS CCA 72 bp CAGCAATTTTCAGGCAGGAATCCTATTAGGATCATCTaGGGGCTTGTTAAACCTGCACATCCCAGGCATCAG +
Preference number: 6 (lower is better)
Translates to: QQFSGRNPIRII*GLVKPAHPRHQ
Trigger: CTGATGCCTGGGATGTGCAGGTTTAACAAGCCCCCAGATGATCCTAATAGGATTCCTGCCTGAAAATTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS CCA 72 bp CTGGCAAACAGATTTACTAATGCTCACCAAAGACTCTaGCTACGAATCCCAGCGGGAACTGTGAGGCAAACA +
Preference number: 6 (lower is better)
Translates to: LANRFTNAHQRL*LRIPAGTVRQT
Trigger: TGTTTGCCTCACAGTTCCCGCTGGGATTCGTAGCCAGAGTCTTTGGTGAGCATTAGTAAATCTGTTTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS CAA 72 bp ACAGGAGTCCCACCAGAATCACCAAGATGGTTTGCTTaGGATTCAAAGTCCCTCTTTGGCACAGCATTCCCA +
Preference number: 6 (lower is better)
Translates to: TGVPPESPRWFA*DSKSLFGTAFP
Trigger: TGGGAATGCTGTGCCAAAGAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443855.5
CDS CAA 90 bp CCCAGCAATTTTCAGGCAGGAATCCTATTAGGATCATCTGGGGGCTaGTTAAACCTGCACATCCCAGGCATCAGAAACTCAATAAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSNFQAGILLGSSGG*LNLHIPGIRNSISS
Trigger: GCTGCTTATTGAGTTTCTGATGCCTGGGATGTGCAGGTTTAACAAGCCCCCAGATGATCCTAATAGGATTCCTGCCTGAAAATTGCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS CAA 90 bp AAGAGCATAGTTCGATTTTCCTCGATATCTGTGGGCTGCACAATATaGTGTCCGCTAATGAGGTGGTTCTCAATGTCGCTCTCCTCGAAG +
Preference number: 6 (lower is better)
Translates to: KSIVRFSSISVGCTI*CPLMRWFSMSLSSK
Trigger: CTTCGAGGAGAGCGACATTGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGAAAATCGAACTATGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000508802.5
CDS TCA 72 bp ACATCCCACAAGATGAAGGCATCTAGGGAAGCCCCGTaGTTATCAGAAGTTAAGGAGGACTCCAAAGTCACA +
Preference number: 6 (lower is better)
Translates to: TSHKMKASREAP*LSEVKEDSKVT
Trigger: TGTGACTTTGGAGTCCTCCTTAACTTCTGATAATCACGGGGCTTCCCTAGATGCCTTCATCTTGTGGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475531.1
CDS GCA 72 bp CTTCACAGGAGTCCCACCAGAATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCTTTCGTTCATGAGGCGT +
Preference number: 6 (lower is better)
Translates to: LHRSPTRITKMV*FGFKVLSFMRR
Trigger: ACGCCTCATGAACGAAAGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000446803.6
CDS GCA 72 bp GTAGGAAAGGTTCGCCCAAGGTCAATAAGAATCGCATaGTGCTGGGAAGTCAGCTGCTTTAAGAGTTCTTTG +
Preference number: 6 (lower is better)
Translates to: VGKVRPRSIRIA*CWEVSCFKSSL
Trigger: CAAAGAACTCTTAAAGCAGCTGACTTCCCAGCAGCATGCGATTCTTATTGACCTTGGGCGAACCTTTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000511238.5
ENST00000615497.4
CDS GCA 72 bp CTTCACAGGAGTCCCACCAGAATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCCTCTTTGGCACAGCATT +
Preference number: 6 (lower is better)
Translates to: LHRSPTRITKMV*FGFKVPLWHSI
Trigger: AATGCTGTGCCAAAGAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443855.5
CDS CCA 72 bp CGGGTCTTCACAGGAGTCCCACCAGAATCACCAAGATaGTTTGCTTTGGATTCAAAGTCCCTTTTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: RVFTGVPPESPR*FALDSKSLFVF
Trigger: GAACACAAAAAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAGACCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6
CDS CAA 72 bp GTTCGATTTTCCTCGATATCTGTGGGCTGCACAATATaGTGTCCGCTAATGAGGTGGTTCTCAATGTCGCTC +
Preference number: 6 (lower is better)
Translates to: VRFSSISVGCTI*CPLMRWFSMSL
Trigger: GAGCGACATTGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGAAAATCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000491553.1
ENST00000508802.5
CDS CAA 72 bp TTTCAGGCAGGAATCCTATTAGGATCATCTGGGGGCTaGTTAAACCTGCACATCCCAGGCATCAGAAACTCA +
Preference number: 6 (lower is better)
Translates to: FQAGILLGSSGG*LNLHIPGIRNS
Trigger: TGAGTTTCTGATGCCTGGGATGTGCAGGTTTAACAAGCCCCCAGATGATCCTAATAGGATTCCTGCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401554.5
CDS CAA 90 bp TTCCTTCTCCATTCTAAGCAGCAGTATCTGTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTCACGAGATGTCCTTTTCTTTTCCTC +
Preference number: 6 (lower is better)
Translates to: FLLHSKQQYLLKNSL*PQLSELTRCPFLFL
Trigger: GAGGAAAAGAAAAGGACATCTCGTGAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTTAGAATGGAGAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS TCA 72 bp ACAGTGATGATGAGCATTTTGTTTGATCATCGGCTTTaGACACATAGCAGATACTCTGCCGGTGGACAGCGT +
Preference number: 6 (lower is better)
Translates to: TVMMSILFDHRL*THSRYSAGGQR
Trigger: ACGCTGTCCACCGGCAGAGTATCTGCTATGTGTTCAAAGCCGATGATCAAACAAAATGCTCATCATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402522.1
CDS CAA 72 bp CATTCTAAGCAGCAGTATCTGTTGAAGAATAGCCTTTaGCCACAGCTCTCGGAGCTCACGAGATGTCCTTTT +
Preference number: 6 (lower is better)
Translates to: HSKQQYLLKNSL*PQLSELTRCPF
Trigger: AAAAGGACATCTCGTGAGCTCCGAGAGCTGTGGCAAAAGGCTATTCTTCAACAGATACTGCTGCTTAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261439.9
ENST00000421339.3
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 72 bp GCCACCTGCAACTGTTCAAGGAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTTTTCTCTAATTTATCC +
Preference number: 6 (lower is better)
Translates to: ATCNCSRRSRFC*RKLLLVFSNLS
Trigger: GGATAAATTAGAGAAAACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGTTGCAGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS GCA 72 bp AAGAGCATAGTTCGATTTTCCTCGATATCTGTGGGCTaGACAATATTGTGTCCGCTAATGAGGTGGTTCTCA +
Preference number: 6 (lower is better)
Translates to: KSIVRFSSISVG*TILCPLMRWFS
Trigger: TGAGAACCACCTCATTAGCGGACACAATATTGTGCAGCCCACAGATATCGAGGAAAATCGAACTATGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000446803.6
ENST00000491553.1
ENST00000508802.5
CDS GCA 72 bp CCACCTGCAACTGTTCAAGGAGGTCAAGGTTCTGTTTaGGTAAGCTGCTGTTGGTTTTCTCTAATTTATCCA +
Preference number: 6 (lower is better)
Translates to: PPATVQGGQGSV*VSCCWFSLIYP
Trigger: TGGATAAATTAGAGAAAACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGTTGCAGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 72 bp AAGAGTTCTTTGTATGGCACATCCTTTGGCTGCTGTTaGCTGGGAAACTGGTGTTTAAGGTGGAATTGCTCA +
Preference number: 6 (lower is better)
Translates to: KSSLYGTSFGCC*LGNWCLRWNCS
Trigger: TGAGCAATTCCACCTTAAACACCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACAAAGAACTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 90 bp AGCTGCTTTAAGAGTTCTTTGTATGGCACATCCTTTGGCTGCTGTTaGCTGGGAAACTGGTGTTTAAGGTGGAATTGCTCAGCTAGAAAT +
Preference number: 6 (lower is better)
Translates to: SCFKSSLYGTSFGCC*LGNWCLRWNCSARN
Trigger: ATTTCTAGCTGAGCAATTCCACCTTAAACACCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS CAA 90 bp CTACCATTTGCCACCTGCAACTGTTCAAGGAGGTCAAGGTTCTGTTaGCGTAAGCTGCTGTTGGTTTTCTCTAATTTATCCATTCTTTGG +
Preference number: 6 (lower is better)
Translates to: LPFATCNCSRRSRFC*RKLLLVFSNLSILW
Trigger: CCAAAGAATGGATAAATTAGAGAAAACCAACAGCAGCTTACGCAAACAGAACCTTGACCTCCTTGAACAGTTGCAGGTGGCAAATGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000405444.3
ENST00000406664.5
ENST00000407365.5
ENST00000492180.1
ENST00000508802.5
ENST00000510573.6
ENST00000615497.4
CDS GCA 72 bp TGCTTTAAGAGTTCTTTGTATGGCACATCCTTTGGCTaGTGTTTGCTGGGAAACTGGTGTTTAAGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: CFKSSLYGTSFG*CLLGNWCLRWN
Trigger: ATTCCACCTTAAACACCAGTTTCCCAGCAAACAGCAGCCAAAGGATGTGCCATACAAAGAACTCTTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261439.9
ENST00000508802.5
ENST00000510573.6
ENST00000511238.5
ENST00000615497.4
CDS TCA 72 bp AACTTGAGCATTTTAAACGCCTCTTCCTCACTCATATaGAGAAGCAAAATGCCTGCTACAAAGCTGAGACCT +
Preference number: 6 (lower is better)
Translates to: NLSILNASSSLI*RSKMPATKLRP
Trigger: AGGTCTCAGCTTTGTAGCAGGCATTTTGCTTCTTCATATGAGTGAGGAAGAGGCGTTTAAAATGCTCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000261439.9
ENST00000401554.5
ENST00000407365.5
ENST00000508802.5
ENST00000510573.6
ENST00000511238.5
ENST00000615497.4
CDS GCA 72 bp CTTCACAGGAGTCCCACCAGAATCACCAAGATGGTTTaGTTTGGATTCAAAGTCCCTTTTTGTGTTCATAAA +
Preference number: 6 (lower is better)
Translates to: LHRSPTRITKMV*FGFKVPFCVHK
Trigger: TTTATGAACACAAAAAGGGACTTTGAATCCAAAGCAAACCATCTTGGTGATTCTGGTGGGACTCCTGTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469803.1
ENST00000508802.5
ENST00000510573.6