Pregenerated sensors for TBATA (Homo sapiens)
Ensembl gene IDs: ENSG00000166220Ensembl transcript IDs: ENST00000299290.5, ENST00000394982.2, ENST00000456372.3, ENST00000456372.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGAACACCCCTGAACCCTaGGGGCTGCTCTTGAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: VLFSKSFHGRESGTAVKVNTPEP*GLLLSK Trigger: CTTGCTCAAGAGCAGCCCCAAGGGTTCAGGGGTGTT...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.3 |
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| CDS-3UTR TCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCGGGTGGAAGCGGGGATaGGCCTCCCAGTCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPGWKRG*ASQSLL Trigger: CAGCAGAGACTGGGAGGCTCATCCCCGCTTCCACCC...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACACTCTGCTGGCCCTGGTaGGATCTGCGGCGGCCGACA | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETLCWPW*DLRRPT Trigger: TGTCGGCCGCCGCAGATCTCACCAGGGCCAGCAGAG...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCTGGATGTGGGTCACGTaGTGGGGGTGTGGGTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPWMWVT*WGCGWC Trigger: GCACCACCCACACCCCCAGCACGTGACCCACATCCA...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCACGTGCTGGGGGTGTaGGTGGTGCCGGGAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPHVLGV*VVPGEE Trigger: TTCTTCTCCCGGCACCACCCACACCCCCAGCACGTG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCCTCCCAGTCTCTGCTaGGTACTTTGCCCCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPPPSLC*VLCPLL Trigger: GAGCAGGGGGCAAAGTACTCAGCAGAGACTGGGAGG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCTTTGGGGTCCTCAATaGCCGGCGGATCCGCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPLWGPQ*PADPLE Trigger: TTCGAGCGGATCCGCCGGGCATTGAGGACCCCAAAG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCTCAGGCAAGGGGGCTaGAAAATCCCTGACGACACA | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPLRQGG*KIPDDT Trigger: TGTGTCGTCAGGGATTTTCCAGCCCCCTTGCCTGAG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGGGCTGGAAAATCCCTaGCGACACAGACAGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETGLENP*RHRQAS Trigger: GGAAGCCTGTCTGTGTCGTCAGGGATTTTCCAGCCC...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGGTTCATCCTCCTTGGTaGGGAAGGCCACCCGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEVHPPW*GRPPGK Trigger: CTTCCCGGGTGGCCTTCCTCACCAAGGAGGATGAAC...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAAAGGAGCTGAGCCACTaGTGTCTGCAGGAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETKELSH*CLQESQ Trigger: CTGGGACTCCTGCAGACAGCAGTGGCTCAGCTCCTT...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGGGCCCCTCAGCTCTCTaGCCTCGGCTTCGATGTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEGPSAL*PRLRCL Trigger: AAGACATCGAAGCCGAGGGCAGAGAGCTGAGGGGCC...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAATCGAGGGGAAGGCTGTaGGTTCTGTGGGCAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSFHGRESGTAVKVVETESRGRL*VLWASL Trigger: CAGACTTGCCCACAGAACCCACAGCCTTCCCCTCGA...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACACACCAGTTCTTTCTGTaGCCCACTGTCCCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETHQFFL*PTVPGA Trigger: AGCCCCAGGGACAGTGGGCCACAGAAAGAACTGGTG...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGATGTGGGTCACGTGCTaGGGGTGTGGGTGGTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLMWVTC*GCGWCR Trigger: CCGGCACCACCCACACCCCCAGCACGTGACCCACAT...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACACGAGGTCTTTTTCCTTaGGCGGAGCGTAGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETRGLFP*AERRAA Trigger: GGCTGCTCTACGCTCCGCCCAAGGAAAAAGACCTCG...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCGGATTGACTGCAGGGTaGCTCTTGCTTCTCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPGLTAG*LLLLLR Trigger: CCTCAAGAGAAGCAAGAGCCACCCTGCAGTCAATCC...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAAGAAGGAGTGGTGACTaGGGCGTCCAAAGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETRRSGD*GVQSSR Trigger: CCTACTGCTTTGGACGCCTCAGTCACCACTCCTTCT...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGCTCCTGCCAAGGCAGTaGCCGCTACAGCATGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVELLPRQ*PLQHVY Trigger: GTACACATGCTGTAGCGGGCACTGCCTTGGCAGGAG...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGTCCAAAGCAGTAGGTaGCAGGGGTTTGGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETVQSSR*QGFGAL Trigger: CAAAGCCCCAAACCCCTGGCACCTACTGCTTTGGAC...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCAATGGGGACAGAGATaGTGGGTATCCCCATTTGAC | + |
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Preference number: 4 (lower is better) Translates to: FHGRESGTAVKVVETETPQWGQR*WVSPFD Trigger: GTCAAATGGGGATACCCACCATCTCTGTCCCCATTG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGCCTTGGCTTGCGCCCTaGCTTCTTCTCCAGTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEPWLAP*LLLQFQ Trigger: CTGAAACTGGAGAAGAAGTCAGGGCGCAAGCCAAGG...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGGCCGGAAAAGACAGTTaGCTCAGGCAAGGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLAGKDS*LRQGGW Trigger: CCAGCCCCCTTGCCTGAGTCAACTGTCTTTTCCGGC...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGAGACAGAAACACCCCTaGACCCTTGGGGCTGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVERQKHP*TLGAAL Trigger: AAGAGCAGCCCCAAGGGTTCAGGGGTGTTTCTGTCT...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGAGTACTTTGCCCCCTaGTCCCGCAGAGGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVEYFAP*SRRGSS Trigger: GGAGGAGCCTCTGCGGGAGCAGGGGGCAAAGTACTC...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGGCTCTTGCTTCTCTTaGGGAGGTTCATGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETGSCFS*GGSCTS Trigger: AGAAGTGCATGAACCTCCTCAAGAGAAGCAAGAGCC...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAACTCTGTGTTCTGGCTTaGATGCATCTGGAGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: KSFHGRESGTAVKVVETELCVLA*MHLEDL Trigger: CAAGTCCTCCAGATGCATTCAAGCCAGAACACAGAG...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACACTCACGAACTGGTGGTaGAAGTGTAAACGGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETLTNWW*KCKREQ Trigger: CTGTTCCCGTTTACACTTCCACCACCAGTTCGTGAG...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGGAGAAGAAGGAGTGGTaGCTGAGGCGTCCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLEKKEW*LRRPKQ Trigger: CTGCTTTGGACGCCTCAGTCACCACTCCTTCTTCTC...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGAGACAGGCTTCCCGGTaGGATCTTGGATGTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLRQASR*DLGCGS Trigger: TGACCCACATCCAAGATCTCACCGGGAAGCCTGTCT...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGGTGGGTATCCCCATTTaGCAGCCGGAAAAGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEVGIPI*QPEKTV Trigger: AACTGTCTTTTCCGGCTGTCAAATGGGGATACCCAC...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGAGGCTGTGGGTTCTGTaGGCAAGTCTGCCTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLRLWVL*ASLPAL Trigger: CAAAGCAGGCAGACTTGCCCACAGAACCCACAGCCT...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTTTTCTTCGGGGATTaGCTGCAGGGTGGCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVVFFGD*LQGGSC Trigger: GCAAGAGCCACCCTGCAGTCAATCCCCGAAGAAAAC...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAGAAATCCACAATCCCTaGGATCACCAGTTCTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSFHGRESGTAVKVVETEEIHNP*DHQFFL Trigger: CAGAAAGAACTGGTGATCCCAGGGATTGTGGATTTC...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGTTCCCGGTGAGATCTTaGATGTGGGTCACGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVFPVRS*MWVTCW Trigger: CCAGCACGTGACCCACATCCAAGATCTCACCGGGAA...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGACTGTGGGTCTCCAATaGGGACAGAGATGGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLTVGLQ*GQRWWV Trigger: TACCCACCATCTCTGTCCCCATTGGAGACCCACAGT...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGTGGGCTCTAGAGTACTaGGATGCTACAATCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEWALEY*DATILR Trigger: TCTCAAGATTGTAGCATCTCAGTACTCTAGAGCCCA...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGAGCTCCAGACATCCTTaGTGTCAGGTACTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVSSRHP*CQVLGS Trigger: AGAGCCCAGTACCTGACATCAAGGATGTCTGGAGCT...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGTCTTCGGGGATTGACTaGAGGGTGGCTCTTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVSSGID*RVALAS Trigger: AGAAGCAAGAGCCACCCTGCAGTCAATCCCCGAAGA...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGGTTCCGATTAGACTGTaGGTCTCCAATGGGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLVPIRL*VSNGDR Trigger: TCTGTCCCCATTGGAGACCCACAGTCTAATCGGAAC...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR TCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGGAGATGCTACAATCTTaGGAACAGGATATGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEEMLQS*EQDMWK Trigger: CTTCCACATATCCTGTTCTCAAGATTGTAGCATCTC...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGGACTCCTTCATGTCTaGTGGAAGACTGACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VLFSKSFHGRESGTAVKVGLLHV*WKTDSA Trigger: AGCAGAGTCAGTCTTCCAGCAGACATGAAGGAGTCC...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACACTTTGGACTCATCAGTaGATAATCAGCCAATTGAAC | + |
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Preference number: 4 (lower is better) Translates to: SKSFHGRESGTAVKVVETLWTHQ*IISQLN Trigger: GTTCAATTGGCTGATTATCCACTGATGAGTCCAAAG...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGTTTCAGCTCAGCCTTTaGACTCATCAGTGGATAATC | + |
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Preference number: 4 (lower is better) Translates to: FSKSFHGRESGTAVKVVEFQLSL*THQWII Trigger: GATTATCCACTGATGAGTCCAAAGGCTGAGCTGAAA...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGGCTTCAGAAGAAAGCTaGGGGTTCCGATTAGACTGT | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLASEES*GFRLDC Trigger: ACAGTCTAATCGGAACCCCCAGCTTTCTTCTGAAGC...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGTGCACTTCTGGAAGCTaGCTTAGGAGCTTTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLCTSGS*LRSFSV Trigger: TACAGAAAAGCTCCTAAGCCAGCTTCCAGAAGTGCA...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR GCA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGTCTAGAGTACTGAGATaGTACAATCTTGAGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLSRVLR*YNLENR Trigger: CCTGTTCTCAAGATTGTAGCATCTCAGTACTCTAGA...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS TCA 90 bp | CCTGGTGAGATCTGCGGCGGCCGACAGCCCGGGTGGAAGCGGGGATaGGCCTCCCAGTCTCTGCTGAGTACTTTGCCCCCTGCTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: PGEICGGRQPGWKRG*ASQSLLSTLPPAPA Trigger: TGCGGGAGCAGGGGGCAAAGTACTCAGCAGAGACTGGGAGGCTCATCCCCGCTTCCACCCGGGCTGTCGGCCGCCGCAGATCTCACCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS TCA 90 bp | GCCGACAGCCCGGGTGGAAGCGGGGATGAGCCTCCCAGTCTCTGCTaGGTACTTTGCCCCCTGCTCCCGCAGAGGCTCCTCCTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ADSPGGSGDEPPSLC*VLCPLLPQRLLLLL Trigger: GAGCAGAAGGAGGAGCCTCTGCGGGAGCAGGGGGCAAAGTACTCAGCAGAGACTGGGAGGCTCATCCCCGCTTCCACCCGGGCTGTCGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CCA 90 bp | TGGGGTCCTCAATGCCCGGCGGATCCGCTCGAAATCCACAATCCCTaGGATCACCAGTTCTTTCTGTGGCCCACTGTCCCTGGGGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: WGPQCPADPLEIHNP*DHQFFLWPTVPGAP Trigger: AGGAGCCCCAGGGACAGTGGGCCACAGAAAGAACTGGTGATCCCAGGGATTGTGGATTTCGAGCGGATCCGCCGGGCATTGAGGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CCA 90 bp | GTGACTGAGGCGTCCAAAGCAGTAGGTGCCAGGGGTTTGGGGCTTTaGGGTCCTCAATGCCCGGCGGATCCGCTCGAAATCCACAATCCC | + |
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Preference number: 5 (lower is better) Translates to: VTEASKAVGARGLGL*GPQCPADPLEIHNP Trigger: GGGATTGTGGATTTCGAGCGGATCCGCCGGGCATTGAGGACCCCAAAGCCCCAAACCCCTGGCACCTACTGCTTTGGACGCCTCAGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS GCA 90 bp | GCAGCTCCTGATCCTGAAGGAGGAAAGCCTGGACTCCTTCATGTCTaGTGGAAGACTGACTCTGCTGGCCCTGGTGAGATCTGCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: AAPDPEGGKPGLLHV*WKTDSAGPGEICGG Trigger: GCCGCCGCAGATCTCACCAGGGCCAGCAGAGTCAGTCTTCCAGCAGACATGAAGGAGTCCAGGCTTTCCTCCTTCAGGATCAGGAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS GCA 90 bp | CTCCTGCCAAGGCAGTGCCCGCTACAGCATGTGTACGAGAAGCCCTaGTGTCCTAGCAGGAAGGAGCAAGAGGACAAATCGAGGGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: LLPRQCPLQHVYEKP*CPSRKEQEDKSRGR Trigger: CCTTCCCCTCGATTTGTCCTCTTGCTCCTTCCTGCTAGGACAGCAGGGCTTCTCGTACACATGCTGTAGCGGGCACTGCCTTGGCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CCA 90 bp | CCACAATCCCTGGGATCACCAGTTCTTTCTGTGGCCCACTGTCCCTaGGGCTCCTTGGCTTGCGCCCTGACTTCTTCTCCAGTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: PQSLGSPVLSVAHCP*GSLACALTSSPVSA Trigger: AGCTGAAACTGGAGAAGAAGTCAGGGCGCAAGCCAAGGAGCCCCAGGGACAGTGGGCCACAGAAAGAACTGGTGATCCCAGGGATTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS TCA 90 bp | TTCTTTCTGTGGCCCACTGTCCCTGGGGCTCCTTGGCTTGCGCCCTaGCTTCTTCTCCAGTTTCAGCTCAGCCTTTGGACTCATCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: FFLWPTVPGAPWLAP*LLLQFQLSLWTHQW Trigger: CCACTGATGAGTCCAAAGGCTGAGCTGAAACTGGAGAAGAAGTCAGGGCGCAAGCCAAGGAGCCCCAGGGACAGTGGGCCACAGAAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS-3UTR CAA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCTTCCCGGTGAGATCTaGGATGTGGGTCACGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: FHGRESGTAVKVVETETPLPGEI*DVGHVL Trigger: CAGCACGTGACCCACATCCAAGATCTCACCGGGAAG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCAGCCGGAAAAGACAGTaGACTCAGGCAAGGGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FHGRESGTAVKVVETETPSRKRQ*TQARGL Trigger: CAGCCCCCTTGCCTGAGTCAACTGTCTTTTCCGGCT...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGTGTCCCTGGGGCTCCTaGGCTTGCGCCCTGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: FSKSFHGRESGTAVKVVECPWGS*ACALTS Trigger: AGAAGTCAGGGCGCAAGCCAAGGAGCCCCAGGGACA...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAATCTCTGCTGAGTACTTaGCCCCCTGCTCCCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: KSFHGRESGTAVKVVETESLLST*PPAPAE Trigger: CTCTGCGGGAGCAGGGGGCAAAGTACTCAGCAGAGA...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCACTGCAGGGTGGCTCTaGCTTCTCTTGAGGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: FHGRESGTAVKVVETETPTAGWL*LLLRRF Trigger: GAACCTCCTCAAGAGAAGCAAGAGCCACCCTGCAGT...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCAAGCTCCAGACATCCTaGATGTCAGGTACTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: FHGRESGTAVKVVETETPKLQTS*MSGTGL Trigger: GAGCCCAGTACCTGACATCAAGGATGTCTGGAGCTT...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACATTCAGTTCATCCTCCTaGGTGAGGAAGGCCACCCGG | + |
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Preference number: 5 (lower is better) Translates to: SKSFHGRESGTAVKVVETFSSSS*VRKATR Trigger: CCGGGTGGCCTTCCTCACCAAGGAGGATGAACTGAA...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGAACACCCCTGAACCCTaGGGGCTGCTCTTGAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FSKSFHGRESGTAVKVVENTPEP*GLLLSK Trigger: CTTGCTCAAGAGCAGCCCCAAGGGTTCAGGGGTGTT...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAACACCCCACTTAATACTAGCGTaGAGGATGCAGAACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FHGRESGTAVKVVETETPHLILA*RMQNRN Trigger: GTTCCTGTTCTGCATCCTCAACGCTAGTATTAAGTG...GGGTGTTTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | TTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGGGTGGGTATCCCCATTaGACAGCCGGAAAAGACAGT | + |
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Preference number: 5 (lower is better) Translates to: FSKSFHGRESGTAVKVVEGGYPH*TAGKDS Trigger: ACTGTCTTTTCCGGCTGTCAAATGGGGATACCCACC...CTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAAGCAGCCAGAACTGGATaGCGCTTAGCAAGTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: KSFHGRESGTAVKVVETEAARTG*RLASLF Trigger: AAACAGACTTGCTAAGCGCAATCCAGTTCTGGCTGC...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCGTTTTCTTCGGGGATaGACTGCAGGGTGGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLRFLRG*TAGWLL Trigger: CAAGAGCCACCCTGCAGTCAATCCCCGAAGAAAACG...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS TCA 90 bp | GAAGCTCCAGACATCCTTGATGTCAGGTACTGGGCTCTAGAGTACTaGGATGCTACAATCTTGAGAACAGGATATGTGGAAGCCCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: EAPDILDVRYWALEY*DATILRTGYVEAPN Trigger: ATTTGGGGCTTCCACATATCCTGTTCTCAAGATTGTAGCATCTCAGTACTCTAGAGCCCAGTACCTGACATCAAGGATGTCTGGAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS-3UTR CAA 90 bp | AAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACAGAACACTTAATACTAGTGTaGAGGATGCAGAACAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: KSFHGRESGTAVKVVETEHLILV*RMQNRN Trigger: GTTCCTGTTCTGCATCCTCAACACTAGTATTAAGTG...TTCTGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | AGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGGTGGAGACATGGATAATCAGCCAATaGAACATCTGTAGCCATTGT | + |
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Preference number: 5 (lower is better) Translates to: SKSFHGRESGTAVKVVETWIISQ*NICSHC Trigger: ACAATGGCTACAGATGTTCAATTGGCTGATTATCCA...TGTCTCCACCACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | GTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGCTGTGAAGGTGTGGCTCTTGCTTCTCTaGAGGAGGTTCATGCACTTC | + |
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Preference number: 5 (lower is better) Translates to: VLFSKSFHGRESGTAVKVWLLLL*RRFMHF Trigger: GAAGTGCATGAACCTCCTCAAGAGAAGCAAGAGCCA...CACCTTCACAGCAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS-3UTR CAA 90 bp | CAGGGAAGACGGTTTTATTTAGTAAGAGTTTTCACGGTAGGGAATCAGGTACTGGTTTCAGCTCAGCCTTaGGACTCATCAGTGGATAAT | + |
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Preference number: 5 (lower is better) Translates to: QGRRFYLVRVFTVGNQVLVSAQP*DSSVDN Trigger: ATTATCCACTGATGAGTCCAAAGGCTGAGCTGAAAC...CAGTACCTGATTCCCTACCGTGAAAACTCTTACTAAATAAAACCGTCTTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000299290.5 |
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| CDS TCA 72 bp | CCGGGTGGAAGCGGGGATGAGCCTCCCAGTCTCTGCTaGGTACTTTGCCCCCTGCTCCCGCAGAGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PGGSGDEPPSLC*VLCPLLPQRLL Trigger: GAGGAGCCTCTGCGGGAGCAGGGGGCAAAGTACTCAGCAGAGACTGGGAGGCTCATCCCCGCTTCCACCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CCA 72 bp | GCGTCCAAAGCAGTAGGTGCCAGGGGTTTGGGGCTTTaGGGTCCTCAATGCCCGGCGGATCCGCTCGAAATC | + |
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Preference number: 6 (lower is better) Translates to: ASKAVGARGLGL*GPQCPADPLEI Trigger: GATTTCGAGCGGATCCGCCGGGCATTGAGGACCCCAAAGCCCCAAACCCCTGGCACCTACTGCTTTGGACGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 90 bp | CTGGGATCACCAGTTCTTTCTGTGGCCCACTGTCCCTGGGGCTCCTaGGCTTGCGCCCTGACTTCTTCTCCAGTTTCAGCTCAGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LGSPVLSVAHCPWGS*ACALTSSPVSAQPL Trigger: CAAAGGCTGAGCTGAAACTGGAGAAGAAGTCAGGGCGCAAGCCAAGGAGCCCCAGGGACAGTGGGCCACAGAAAGAACTGGTGATCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CCA 72 bp | CAATGCCCGGCGGATCCGCTCGAAATCCACAATCCCTaGGATCACCAGTTCTTTCTGTGGCCCACTGTCCCT | + |
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Preference number: 6 (lower is better) Translates to: QCPADPLEIHNP*DHQFFLWPTVP Trigger: AGGGACAGTGGGCCACAGAAAGAACTGGTGATCCCAGGGATTGTGGATTTCGAGCGGATCCGCCGGGCATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 90 bp | ATCACCAGTTCTTTCTGTGGCCCACTGTCCCTGGGGCTCCTTGGCTaGCGCCCTGACTTCTTCTCCAGTTTCAGCTCAGCCTTTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: ITSSFCGPLSLGLLG*RPDFFSSFSSAFGL Trigger: GAGTCCAAAGGCTGAGCTGAAACTGGAGAAGAAGTCAGGGCGCAAGCCAAGGAGCCCCAGGGACAGTGGGCCACAGAAAGAACTGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS GCA 72 bp | AGGCAGTGCCCGCTACAGCATGTGTACGAGAAGCCCTaGTGTCCTAGCAGGAAGGAGCAAGAGGACAAATCG | + |
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Preference number: 6 (lower is better) Translates to: RQCPLQHVYEKP*CPSRKEQEDKS Trigger: CGATTTGTCCTCTTGCTCCTTCCTGCTAGGACAGCAGGGCTTCTCGTACACATGCTGTAGCGGGCACTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 90 bp | CGAGGTCTTTTTCCTTGGGCGGAGCGTAGAGCAGCCAGAACTGGATaGCGCTTAGCAAGTCTGTTTCCAGGATCCGACACAGGAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RGLFPWAERRAARTG*RLASLFPGSDTGAP Trigger: TGGAGCTCCTGTGTCGGATCCTGGAAACAGACTTGCTAAGCGCAATCCAGTTCTGGCTGCTCTACGCTCCGCCCAAGGAAAAAGACCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 72 bp | TTTCCTTGGGCGGAGCGTAGAGCAGCCAGAACTGGATaGCGCTTAGCAAGTCTGTTTCCAGGATCCGACACA | + |
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Preference number: 6 (lower is better) Translates to: FPWAERRAARTG*RLASLFPGSDT Trigger: TGTGTCGGATCCTGGAAACAGACTTGCTAAGCGCAATCCAGTTCTGGCTGCTCTACGCTCCGCCCAAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 72 bp | TCCTTGCTGGGATGTAAGTTCCGTGACAGCAGGAACTaGTCTGAATTCTTCCTCACTGATCCCCAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLLGCKFRDSRN*SEFFLTDPQSS Trigger: TGAACTCTGGGGATCAGTGAGGAAGAATTCAGACAAGTTCCTGCTGTCACGGAACTTACATCCCAGCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394982.2 |
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| CDS CAA 90 bp | CTAGCGTTGAGGATGCAGAACAGGAACTCTCACTTAATACTAGTGTaGAGGATGCAGAACAGGAACTCTCACGAACTGGTGGTGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LALRMQNRNSHLILV*RMQNRNSHELVVEV Trigger: CACTTCCACCACCAGTTCGTGAGAGTTCCTGTTCTGCATCCTCAACACTAGTATTAAGTGAGAGTTCCTGTTCTGCATCCTCAACGCTAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS TCA 72 bp | TCTTTTCTTTCCTTAAAAGGAAGCTCCAGACATCCTTaGTGTCAGGTACTGGGCTCTAGAGTACTGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: SFLSLKGSSRHP*CQVLGSRVLRC Trigger: GCATCTCAGTACTCTAGAGCCCAGTACCTGACATCAAGGATGTCTGGAGCTTCCTTTTAAGGAAAGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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| CDS CAA 90 bp | CAGTTTCAGCTCAGCCTTTGGACTCATCAGTGGATAATCAGCCAATaGAACATCTGTAGCCATTGTATGCTTTTTAACAGACTAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: QFQLSLWTHQWIISQ*NICSHCMLFNRLKA Trigger: GGCCTTTAGTCTGTTAAAAAGCATACAATGGCTACAGATGTTCAATTGGCTGATTATCCACTGATGAGTCCAAAGGCTGAGCTGAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000299290.5 ENST00000456372.4 |
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