RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAX1BP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106052

Ensembl transcript IDs: ENST00000265393.10, ENST00000396319.6, ENST00000396319.7, ENST00000409980.5, ENST00000416801.6, ENST00000418691.5, ENST00000422800.5, ENST00000433216.6, ENST00000457186.2, ENST00000460059.1, ENST00000488564.2, ENST00000490455.1, ENST00000494033.1, ENST00000543117.5

Found 561 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGTaGCTCGAGTCCCGCAGCCCCTACGCTGCCCACCGCAGGCCCTCT +
Preference number: 1 (lower is better)
Translates to: TPCQGREWVPASERL*LESRSPYAAHRRPS
Trigger: AGAGGGCCTGCGGTGGGCAGCGTAGGGGCTGCGGGACTCGAGTCACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 90 bp AGGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTaGGCGCCTGTGACTCGAGTCCCGCAGCCCCTACGCTGCCCACCG +
Preference number: 1 (lower is better)
Translates to: RTPHALSGTRMGASI*APVTRVPQPLRCPP
Trigger: CGGTGGGCAGCGTAGGGGCTGCGGGACTCGAGTCACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 90 bp GTTCTTGCTCCGCCAACTCCTAGCTGTGAATTGTTGGGAAGCCCTTaGCCTGGTCTCTTAGGTGGGAACGCAGGGCTCCTGCTTCCAGGG +
Preference number: 1 (lower is better)
Translates to: VLAPPTPSCELLGSP*PGLLGGNAGLLLPG
Trigger: CCCTGGAAGCAGGAGCCCTGCGTTCCCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAATTCACAGCTAGGAGTTGGCGGAGCAAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 90 bp TCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTG +
Preference number: 1 (lower is better)
Translates to: SESSKPSGRLKFRAG*LQTTLSSSPQEGTL
Trigger: CAGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR GCA 90 bp AAAGCTTGGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTaGTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAG +
Preference number: 1 (lower is better)
Translates to: KAWEGVARRSSFATS*FPGMGKEFPSKGVE
Trigger: CTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCCAAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 90 bp GTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATaGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATT +
Preference number: 1 (lower is better)
Translates to: VLLGEAALLPPAFQE*GRSSLAKVWRLLGI
Trigger: AATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 90 bp GCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCCAGTGACTTTCAACATGTTCTTCAA +
Preference number: 1 (lower is better)
Translates to: AFQTPAGHSQEGTAR*TSGTPSSDFQHVLQ
Trigger: TTGAAGAACATGTTGAAAGTCACTGGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTaGTACAAGCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTAT +
Preference number: 1 (lower is better)
Translates to: GQTPSNVAKWYHCVT*YKRFQTGSLYLGSY
Trigger: ATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 90 bp ATTTCAAGATTTGCTCCAGGACAGACCCCAAGCAACGTGGCCAAGTaGTACCACTGTGTCACTTGGTACAAGCGTTTCCAAACCGGCTCT +
Preference number: 1 (lower is better)
Translates to: ISRFAPGQTPSNVAK*YHCVTWYKRFQTGS
Trigger: AGAGCCGGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCCTGGAGCAAATCTTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTGTCTCGTACGTTGACAGCATCACTG +
Preference number: 1 (lower is better)
Translates to: SANCFFTFSFSKRAV*RSAIVLSRTLTASL
Trigger: CAGTGATGCTGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR TCA 90 bp AAGCTGGAATCAAAGCAAAAGCCTGTCCCATGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCAGTAGGCACATTCTCATCTTCTTTG +
Preference number: 1 (lower is better)
Translates to: KLESKQKPVPCPRKC*LGGSGAVGTFSSSL
Trigger: CAAAGAAGATGAGAATGTGCCTACTGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCATGGGACAGGCTTTTGCTTTGATTCCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR GCA 90 bp CTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTACGTTGACAGCATCACTGAGTTCTTT +
Preference number: 1 (lower is better)
Translates to: LLFHFLVFQACSMQV*HRSVSYVDSITEFF
Trigger: AAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CCA 90 bp AAAAACAGATTTCAAGATTTGCTCCAGGACAGACCCCAAGCAACGTaGCCAAGTGGTACCACTGTGTCACTTGGTACAAGCGTTTCCAAA +
Preference number: 1 (lower is better)
Translates to: KNRFQDLLQDRPQAT*PSGTTVSLGTSVSK
Trigger: TTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCCTGGAGCAAATCTTGAAATCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 90 bp ATTAAGTATATAAACAAAAGTCCATCTTGTCGCAACCGAGGGAGATaGCTAGTTTCACCCAAGGACTTGGTGGTAAGCTGCTGCCGAGTG +
Preference number: 1 (lower is better)
Translates to: IKYINKSPSCRNRGR*LVSPKDLVVSCCRV
Trigger: CACTCGGCAGCAGCTTACCACCAAGTCCTTGGGTGAAACTAGTCATCTCCCTCGGTTGCGACAAGATGGACTTTTGTTTATATACTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 90 bp TTAAATGAGATAATGCACAGAGTGTGCCTGAAACATCATAGGCACTaGGTAAACTTCAGGTCCCTTCCTTCCTTCCTGGCTCCTTTCAAC +
Preference number: 1 (lower is better)
Translates to: LNEIMHRVCLKHHRH*VNFRSLPSFLAPFN
Trigger: GTTGAAAGGAGCCAGGAAGGAAGGAAGGGACCTGAAGTTTACTCAGTGCCTATGATGTTTCAGGCACACTCTGTGCATTATCTCATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 90 bp ATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATaGACCCAGGTCTGTGTTGATGTTCTCTGTCAGAGGACAAAATTA +
Preference number: 1 (lower is better)
Translates to: IKAKWLVLHLTKAKA*TQVCVDVLCQRTKL
Trigger: TAATTTTGTCCTCTGACAGAGAACATCAACACAGACCTGGGTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 90 bp ATGGCATTGCTTACACTGCCTTCCATGTTTTCAGTGCATACTCTATaGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATTCTGAT +
Preference number: 1 (lower is better)
Translates to: MALLTLPSMFSVHTL*RSSYPRYSIHTHSD
Trigger: ATCAGAATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGTGTAAGCAATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 90 bp TTTTCAATTGCTTTATGTGTTACTGACACAATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCATCACTGAACCTCTTCTTAAACTCT +
Preference number: 1 (lower is better)
Translates to: FSIALCVTDTISSSS*WALDVASLNLFLNS
Trigger: AGAGTTTAAGAAGAGGTTCAGTGATGCTACATCCAAAGCCCATCAGCTTGAGGAAGATATTGTGTCAGTAACACATAAAGCAATTGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGCTAGCATGGGGAGTGTaGGGAGCCTGTCATCGTTGC +
Preference number: 2 (lower is better)
Translates to: GHPTPCQGREWVPASERLLAWGV*GACHRC
Trigger: GCAACGATGACAGGCTCCTCACACTCCCCATGCTAG...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCCGCAGCCCCTACGCTaGCCACCGCAGGCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDPQPLR*PPQALW
Trigger: CCAGAGGGCCTGCGGTGGGCAGCGTAGGGGCTGCGG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGCTCTGAGCCCCAGCTaGGCTCCCTCCTGGCCTCTG +
Preference number: 2 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWALSPS*APSWPL
Trigger: CAGAGGCCAGGAGGGAGCGCAGCTGGGGCTCAGAGC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp CTGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAAGCAGGAAGTGTCGCATaGGCTGAAGGGCAGATGCGG +
Preference number: 2 (lower is better)
Translates to: LAPFNFEPQMPASLFLAQAGSVA*AEGQMR
Trigger: CCGCATCTGCCCTTCAGCTCATGCGACACTTCCTGC...TTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGGGCTCACAGTGCTCTaGGCCCCAGCTGCGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDGLTVL*APAALP
Trigger: AGGGAGCGCAGCTGGGGCTCAGAGCACTGTGAGCCC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACCAGGCAGGCCCCTGGTaGAATGTAGCCTCACACCTG +
Preference number: 2 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNQAGPW*NVASHL
Trigger: CAGGTGTGAGGCTACATTGCACCAGGGGCCTGCCTG...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGCGCAGGCCCTCTGGCTaGCGCCTGGTGCTGTGGACG +
Preference number: 2 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVRRPSG*RLVLWT
Trigger: CGTCCACAGCACCAGGCGGCAGCCAGAGGGCCTGCG...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACACCCAGGCAGGCCCCTaGTGCAATGTAGCCTCACAC +
Preference number: 2 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNTQAGP*CNVASH
Trigger: GTGTGAGGCTACATTGCACCAGGGGCCTGCCTGGGT...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGCCACCGCAGGCCCTCTaGCTGCCGCCTGGTGCTGTG +
Preference number: 2 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVPPQAL*LPPGAV
Trigger: CACAGCACCAGGCGGCAGCCAGAGGGCCTGCGGTGG...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACGGAACGCAGGGCTCCTaGTTCCAGGGTTGTAAGGGA +
Preference number: 2 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNGTQGS*FQGCKG
Trigger: TCCCTTACAACCCTGGAAGCAGGAGCCCTGCGTTCC...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCACGTGCCTTCCCCCTaGGACGCAGACAGTGTAGGC +
Preference number: 2 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVHVPSP*DADSVG
Trigger: GCCTACACTGTCTGCGTCTCAGGGGGAAGGCACGTG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp CAAGGACTTGGTGGTAAGCTGCTGCCGAGTGGTGTGTGTCCCACCTaGCCTGGGATAGTTCCAACTTACCACCTGTCGGCCTACACTACC +
Preference number: 2 (lower is better)
Translates to: QGLGGKLLPSGVCPT*PGIVPTYHLSAYTT
Trigger: GGTAGTGTAGGCCGACAGGTGGTAAGTTGGAACTATCCCAGGCAAGGTGGGACACACACCACTCGGCAGCAGCTTACCACCAAGTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGTTTGCAGTCCCCTGGTaGCGGGAGTGCCCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVFAVPW*RECPLP
Trigger: AGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAA...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCTGGCTGCCGCCTGGTaGTGTGGACGCCTGGTTAAT +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDLAAAW*CGRLVN
Trigger: ATTAACCAGGCGTCCACAGCACCAGGCGGCAGCCAG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATAGGGACGCGAATGGGTaGCAGCATCTGAGCGCCTGT +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDRDANG*QHLSAC
Trigger: ACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCT...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGGCTGCCTGTTGAAGTaGTTCTCCATCCCTGCCGTC +
Preference number: 2 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWGCLLK*FSIPAV
Trigger: GACGGCAGGGATGGAGAACCACTTCAACAGGCAGCC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp CCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATaGTCTTCCAGTCCCCAAGAGGGGACTCTGACAGGTGGCCTTTGT +
Preference number: 2 (lower is better)
Translates to: PSGRLKFRAGWLQTT*SSSPQEGTLTGGLC
Trigger: ACAAAGGCCACCTGTCAGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGGGAATAGCCGTGTTTaGAGTCCCCTGGTGCCGGGA +
Preference number: 2 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVGNSRV*SPLVPG
Trigger: TCCCGGCACCAGGGGACTGCAAACACGGCTATTCCC...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACCCCACATTCTGCCGCTaGCGATTTATCCTTAGACCT +
Preference number: 2 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNPTFCR*RFILRP
Trigger: AGGTCTAAGGATAAATCGCCAGCGGCAGAATGTGGG...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGTTATTTAGGGAGCTATaGCCAAGTACAGCAGAATTT +
Preference number: 2 (lower is better)
Translates to: GHPTPCQGREWVPASERLLFREL*PSTAEF
Trigger: AAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAA...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGAAAGAGGCTGCCTGTTaGAGTGGTTCTCCATCCCTG +
Preference number: 2 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWKEAAC*SGSPSL
Trigger: CAGGGATGGAGAACCACTTCAACAGGCAGCCTCTTT...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATAGCAAGTCTTCCCTGTaGCTTTGCAGCCACAGGCTG +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDSKSSL*LCSHRL
Trigger: CAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCT...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp CTTTGCAGCCACAGGCTGGGTTGCCATAGAACCGAGTTAATGTTCTaGCTCCGCCAACTCCTAGCTGTGAATTGTTGGGAAGCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: LCSHRLGCHRTELMF*LRQLLAVNCWEALA
Trigger: GGCAAGGGCTTCCCAACAATTCACAGCTAGGAGTTGGCGGAGCAAGAACATTAACTCGGTTCTATGGCAACCCAGCCTGTGGCTGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp CACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACCCAAGAGGGGACTCTaGCAGGTGGCCTTTGTATTT +
Preference number: 2 (lower is better)
Translates to: HMPFKHLLVIVRRELLAAPKRGL*QVAFVF
Trigger: AAATACAAAGGCCACCTGTCAGAGTCCCCTCTTGGG...TGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp CACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCATCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTG +
Preference number: 2 (lower is better)
Translates to: HMPFKHLLVIVRRELLAASKRAV*RSAIVL
Trigger: CAGAACGATGGCAGACCTGCATACTGCACGCTTGGA...TGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGAAGGGGACAGTGTTCTaGTCATTTGGGAGTGTCAGG +
Preference number: 2 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKKGTVF*SFGSVR
Trigger: CCTGACACTCCCAAATGAGCAGAACACTGTCCCCTT...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTCTGAACCTGTTCCTCTaGTTTACGAAGTTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSLNLFL*FTKLLL
Trigger: AAGGAGCAACTTCGTAAAGCAGAGGAACAGGTTCAG...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp CACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCAAACTTCTTGCCGAGTTaGCTGAACCTGTTCCTCTGC +
Preference number: 2 (lower is better)
Translates to: HMPFKHLLVIVRRELLAANFLPS*LNLFLC
Trigger: GCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTT...TGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAAACTTTGAGCCTCAGATaGCGGCGTCCCTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: AFPNRLSLFRELWPSTAETLSLR*RRPCSW
Trigger: CCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGT...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCGGGGACTCTGACAGGTaGCCTTTGTATTTCATCTGG +
Preference number: 2 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSGDSDR*PLYFIW
Trigger: CCAGATGAAATACAAAGGCCACCTGTCAGAGTCCCC...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGAGTGTTCTGCTCATTTaGGAGTGTCAGGCACTAGCA +
Preference number: 2 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWSVLLI*ECQALA
Trigger: TGCTAGTGCCTGACACTCCCAAATGAGCAGAACACT...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp AGGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTaGGTACAAGCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: RTDPKQRGQVVPLCH*VQAFPNRLSLFREL
Trigger: TAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TCAGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTAC +
Preference number: 2 (lower is better)
Translates to: SGRLKFRAGWLQTTLSSSCSMQV*HRSVSY
Trigger: GTACGAGACAGAACGATGGCAGACCTGCATACTGCA...ACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTTTCTTTATAATGGTCTaGAGCCATCTGAAGACGGAG +
Preference number: 2 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSFFIMV*SHLKTE
Trigger: CTCCGTCTTCAGATGGCTGCAGACCATTATAAAGAA...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCGTAACCCCCGACCTTaGAGACTTCTGCATTTACTA +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDRNPRP*RLLHLL
Trigger: TAGTAAATGCAGAAGTCTCCAAGGTCGGGGGTTACG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAAGACCCCAAGCAACGTaGCCAAGTGGTACCACTGTG +
Preference number: 2 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVRPQAT*PSGTTV
Trigger: CACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCT...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp TCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCATCGTTCTGTCTCTCTTGCCGAGTTGCCTaGACCTGTTCCTCTGCTTTA +
Preference number: 2 (lower is better)
Translates to: SLSRFPSVQYAGLPSFCLSCRVA*TCSSAL
Trigger: TAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGA...GAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTTGTCAGCAATTTCTTTaGTCATTTCACAGACTTGCC +
Preference number: 2 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSCQQFL*SFHRLA
Trigger: GGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCGGCGTCCCTGTTCCTaGCGCAACTGGCTCTTCAAA +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGRRPCS*RNWLFK
Trigger: TTTGAAGAGCCAGTTGCGCCAGGAACAGGGACGCCG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp TCCAAGCGTGCAGTATGCAGGTCTGCCATCGTTCTGTCTCGTACGTaGACAGCATCACTGAGTTCTTTAGCCAGAAAGACAACTTCTTGC +
Preference number: 2 (lower is better)
Translates to: SKRAVCRSAIVLSRT*TASLSSLARKTTSC
Trigger: GCAAGAAGTTGTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCTGGGTCTGTGTTTACTaGAGCATCATTCACTTTCTG +
Preference number: 2 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSWVCVY*SIIHFL
Trigger: CAGAAAGTGAATGATGCTTCAGTAAACACAGACCCA...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTAAGTGTCGCATGAGCTaGAGGGCAGATGCGGTGCCT +
Preference number: 2 (lower is better)
Translates to: PNRLSLFRELWPSTAEFIKCRMS*RADAVP
Trigger: AGGCACCGCATCTGCCCTTCAGCTCATGCGACACTT...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATGCACAGAGTGTGCCTaGAACATCATAGGCACTGAG +
Preference number: 2 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVCTECA*NIIGTE
Trigger: CTCAGTGCCTATGATGTTTCAGGCACACTCTGTGCA...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCTTGTTGGGAAGCCCTTaGCCTGGTCTCTTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: FQCILYGGPPIPGILYTLLLGSP*PGLLGG
Trigger: CCCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAA...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAAGCCACAGGCTGGGTTaGCATAGAACCGAGTTAATG +
Preference number: 2 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVSHRLG*HRTELM
Trigger: CATTAACTCGGTTCTATGGCAACCCAGCCTGTGGCT...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCCGCTGGAGGAGCTTTaGGAAATAGCATTTATAGTT +
Preference number: 2 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVPLEEL*EIAFIV
Trigger: AACTATAAATGCTATTTCGCAAAGCTCCTCCAGCGG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATTTGGTGGTAAGCTGCTaGCGAGTGGTGTGTGTCCCA +
Preference number: 2 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHLVVSC*RVVCVP
Trigger: TGGGACACACACCACTCGGCAGCAGCTTACCACCAA...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGTTACAAAGATGGCATTaGTTACACTGCCTTCCATGT +
Preference number: 2 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWLQRWH*LHCLPC
Trigger: ACATGGAAGGCAGTGTAAGCAATGCCATCTTTGTAA...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATTGTTCCTGGCGCAACTaGCTCTTCAAACAATCTTAT +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDCSWRN*LFKQSY
Trigger: ATAAGATTGTTTGAAGAGCCAGTTGCGCCAGGAACA...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGGTAAAAAGCACCATCTaGTCCATCTTCCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWVKSTI*SIFHFP
Trigger: AGGAAAATGGAAGATGGAGCAGATGGTGCTTTTTAC...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACACATTCTCATCTTCTTTaGTATCCTCAGAGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTHSHLL*YPQSPL
Trigger: TAGAGGACTCTGAGGATAGCAAAGAAGATGAGAATG...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCGCTTCCTGTCTGAGCTaGGTAACTGTGATGGGTCAG +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGASCLS*VTVMGQ
Trigger: CTGACCCATCACAGTTACGCAGCTCAGACAGGAAGC...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAGACTTGGTGGTAAGCTaGTGCCGAGTGGTGTGTGTC +
Preference number: 2 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKDLVVS*CRVVCV
Trigger: GACACACACCACTCGGCAGCAGCTTACCACCAAGTC...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATTCTTTAAATTCAACCTaGAAGGAAGAGACTTGTGCC +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDSLNST*KEETCA
Trigger: GGCACAAGTCTCTTCCTTGCAGGTTGAATTTAAAGA...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACACCTTTGTATTTCATCTaGGTAAAAAGCACCATCTGC +
Preference number: 2 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTPLYFI*VKSTIC
Trigger: GCAGATGGTGCTTTTTACCCAGATGAAATACAAAGG...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCTTTGCAGCCACAGGCTaGGTTGCCATAGAACCGAGT +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGFAATG*VAIEPS
Trigger: ACTCGGTTCTATGGCAACCCAGCCTGTGGCTGCAAA...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGAAAATAAAAGCCAAGTaGCTTGTCCTTCACCTAACG +
Preference number: 2 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVKIKAK*LVLHLT
Trigger: CGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTT...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp TACGTTGACAGCATCACTGAGTTCTTTAGCCAGAAAGACAACTTCTaGCCGAGTTGCCTGAACCTGTTCCTCTGCTTTACGAAGTTGCTC +
Preference number: 2 (lower is better)
Translates to: YVDSITEFFSQKDNF*PSCLNLFLCFTKLL
Trigger: GAGCAACTTCGTAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCA +
Preference number: 2 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSAISSSS*WALDVA
Trigger: TGCTACATCCAAAGCCCATCAGCTTGAGGAAGATAT...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGAGTATCTTCTTTACTTaGGGTTGTAAGCAGGAAAGT +
Preference number: 2 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWSIFFT*GCKQES
Trigger: ACTTTCCTGCTTACAACCTCAAGTAAAGAAGATACT...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR TCA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGGACACTTCTTGTaGACATCAAAGCTGGAATCA +
Preference number: 2 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRRGHFL*TSKLES
Trigger: TGATTCCAGCTTTGATGTTCACAAGAAGTGTCCCCT...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCACTGCATCAGCTAACTaGTTTTTCACTTTCTCGTTT +
Preference number: 2 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSTASAN*FFTFSF
Trigger: AAACGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGT...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACCTAGCTGTGAATTGTTaGGAAGCCCTTGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: ENKSQVACPSPNESKGMNLAVNC*EALALV
Trigger: GACCAGGGCAAGGGCTTCCCAACAATTCACAGCTAG...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATGTGTCCCACCTTGCCTaGGATAGTTCCAACTTACCA +
Preference number: 2 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHVSHLA*DSSNLP
Trigger: TGGTAAGTTGGAACTATCCCAGGCAAGGTGGGACAC...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAACTCAGTATTAAATGGTaGAGAGCCAGCAACTCAAAG +
Preference number: 2 (lower is better)
Translates to: AFPNRLSLFRELWPSTAELSIKW*RASNSK
Trigger: CTTTGAGTTGCTGGCTCTTCACCATTTAATACTGAG...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCATCGTTCTGTCTCAGCAGGAAAGTTCTTTaGAGATTTTCCTTTTCAGCC +
Preference number: 2 (lower is better)
Translates to: SLSRFPSVQYAGLPSFCLSRKVL*RFSFSA
Trigger: GGCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCT...GAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR GCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTAGCTACCCCACATTCTaGCGCTGGCGATTTATCCTT +
Preference number: 2 (lower is better)
Translates to: PNRLSLFRELWPSTAEFISYPTF*RWRFIL
Trigger: AAGGATAAATCGCCAGCGGCAGAATGTGGGGTAGCT...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAACCATCCCTGCCGTCTTaGAAAGAAGTCAGTAGAGTG +
Preference number: 2 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKPSLPS*KEVSRV
Trigger: CACTCTACTGACTTCTTTGCAAGACGGCAGGGATGG...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACGTGGTTCTCCATCCCTaGCGTCTTGCAAAGAAGTCA +
Preference number: 2 (lower is better)
Translates to: ENKSQVACPSPNESKGMNVVLHP*RLAKKS
Trigger: TGACTTCTTTGCAAGACGGCAGGGATGGAGAACCAC...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCAGAAGTGTTCCAACTTaGAGGGTAAGCTGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGRSVPT*RVSCVS
Trigger: GGACACACAGCTTACCCTGCAAGTTGGAACACTTCT...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATAAAGCTCCAAATAAATaGCTTTGGGCCTCATTAAAA +
Preference number: 2 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDKAPNK*LWASLK
Trigger: TTTTAATGAGGCCCAAAGCCATTTATTTGGAGCTTT...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAATCAGTGCATACTCTATaGAGGTCCTCCTATCCCAGG +
Preference number: 2 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKSVHTL*RSSYPR
Trigger: CCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGGAGCCTGTCATCGTTaGTTATTTTTGGTTTTGGCC +
Preference number: 2 (lower is better)
Translates to: FQCILYGGPPIPGILYTLGACHR*LFLVLA
Trigger: GGCCAAAACCAAAAATAAGCAACGATGACAGGCTCC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAGACTTCAAAACAGACTaGTTCGAATTCCATCTCAGT +
Preference number: 2 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVDFKTD*FEFHLS
Trigger: ACTGAGATGGAATTCGAAGCAGTCTGTTTTGAAGTC...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCTGTTCTGCTTGCAGTTaGTCACATCTTTCTTTCTCA +
Preference number: 2 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSACSACS*SHLSFS
Trigger: TGAGAAAGAAAGATGTGACCAACTGCAAGCAGAACA...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CAA 90 bp TTTCTTACCATGTGCTACTCTAAGGCCTACCATGGGCCAGGCATTTaGTCCAGAGTCCTAAAAACAGGAACTCAGTTATTCTTCACAACA +
Preference number: 2 (lower is better)
Translates to: FLTMCYSKAYHGPGI*SRVLKTGTQLFFTT
Trigger: TGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGACTCTGGACAAAATGCCTGGCCCATGGTAGGCCTTAGAGTAGCACATGGTAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCCACGGGGCTTGTAAATaGATTAGGACTTGTCAACAT +
Preference number: 2 (lower is better)
Translates to: FQCILYGGPPIPGILYTLHGACK*IRTCQH
Trigger: ATGTTGACAAGTCCTAATGCATTTACAAGCCCCGTG...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCTTCCATGTTTTCAGTaGATACTCTATGGAGGTCCT +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGLPCFQ*ILYGGP
Trigger: AGGACCTCCATAGAGTATGCACTGAAAACATGGAAG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR TCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCTACTGGAGGATTAAATaGGATAATGCACAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGYWRIK*DNAQSV
Trigger: CACACTCTGTGCATTATCTCATTTAATCCTCCAGTA...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp GGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATaGAAACCCACATTTAGCTCCAAAGCTTCATGTTTGCCAGATTGT +
Preference number: 2 (lower is better)
Translates to: GSLYLGSYGQVQQNL*KPTFSSKASCLPDC
Trigger: ACAATCTGGCAAACATGAAGCTTTGGAGCTAAATGTGGGTTTCAATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 90 bp GAGAGCAAGGCAACAGTAAATGAGATAAACAGCTCACATAGCATTTaGTTTATTTTCTTACCATGTGCTACTCTAAGGCCTACCATGGGC +
Preference number: 2 (lower is better)
Translates to: ESKATVNEINSSHSI*FIFLPCATLRPTMG
Trigger: GCCCATGGTAGGCCTTAGAGTAGCACATGGTAAGAAAATAAACAAAATGCTATGTGAGCTGTTTATCTCATTTACTGTTGCCTTGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAAAGGACGCCAGCATGTaGCATTTGTTTAAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKKDASM*HLFKSK
Trigger: TTTACTCTTAAACAAATGCCACATGCTGGCGTCCTT...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR GCA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAAAGACCCTTTTGTTCTaGTTGCAGTTGGTCACATCT +
Preference number: 2 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQKTLLF*LQLVTS
Trigger: AGATGTGACCAACTGCAAGCAGAACAAAAGGGTCTT...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR TCA 72 bp CAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGTaGCTCGAGTCCCGCAGCCCCTACGCTGCCCACCGC +
Preference number: 3 (lower is better)
Translates to: QGREWVPASERL*LESRSPYAAHR
Trigger: GCGGTGGGCAGCGTAGGGGCTGCGGGACTCGAGTCACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 72 bp CACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTaGGCGCCTGTGACTCGAGTCCCGCAGCCCCTACGC +
Preference number: 3 (lower is better)
Translates to: HALSGTRMGASI*APVTRVPQPLR
Trigger: GCGTAGGGGCTGCGGGACTCGAGTCACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp CAGGACACCCCACGCCCTGTCAGGGACGCGAATGGGTaGCAGCATCTGAGCGCCTGTGACTCGAGTCCCGCA +
Preference number: 3 (lower is better)
Translates to: QDTPRPVRDANG*QHLSACDSSPA
Trigger: TGCGGGACTCGAGTCACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 72 bp GCCCTGCCTGGGGCTGGATACCACGTGCCTTCCCCCTaGGACGCAGACAGTGTAGGCTGCTTCAACGCCTCG +
Preference number: 3 (lower is better)
Translates to: ALPGAGYHVPSP*DADSVGCFNAS
Trigger: CGAGGCGTTGAAGCAGCCTACACTGTCTGCGTCTCAGGGGGAAGGCACGTGGTATCCAGCCCCAGGCAGGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp ACGCTGCCCACCGCAGGCCCTCTGGCTGCCGCCTGGTaGTGTGGACGCCTGGTTAATAAAAGGGGAGCATTT +
Preference number: 3 (lower is better)
Translates to: TLPTAGPLAAAW*CGRLVNKRGAF
Trigger: AAATGCTCCCCTTTTATTAACCAGGCGTCCACAGCACCAGGCGGCAGCCAGAGGGCCTGCGGTGGGCAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp CCGCCAACTCCTAGCTGTGAATTGTTGGGAAGCCCTTaGCCTGGTCTCTTAGGTGGGAACGCAGGGCTCCTG +
Preference number: 3 (lower is better)
Translates to: PPTPSCELLGSP*PGLLGGNAGLL
Trigger: CAGGAGCCCTGCGTTCCCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAATTCACAGCTAGGAGTTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp GATGAGCAATTTGAAGCTCAGAGAGGTGGCGTCACTTaGCTGGGCTCACAGTGCTCTGAGCCCCAGCTGCGC +
Preference number: 3 (lower is better)
Translates to: DEQFEAQRGGVT*LGSQCSEPQLR
Trigger: GCGCAGCTGGGGCTCAGAGCACTGTGAGCCCAGGCAAGTGACGCCACCTCTCTGAGCTTCAAATTGCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp GGGATCGCTTCGTCTTCCAGGAGCTACCCCACATTCTaGCGCTGGCGATTTATCCTTAGACCTCCTGGCCTT +
Preference number: 3 (lower is better)
Translates to: GIASSSRSYPTF*RWRFILRPPGL
Trigger: AAGGCCAGGAGGTCTAAGGATAAATCGCCAGCGGCAGAATGTGGGGTAGCTCCTGGAAGACGAAGCGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACACCGAGTTAATGTTCTaGCTCCGCCAACTCCTAGCT +
Preference number: 3 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNTELMF*LRQLLA
Trigger: AGCTAGGAGTTGGCGGAGCAAGAACATTAACTCGGT...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 72 bp GCTTCGTCTTCCAGGAGCTACCCCACATTCTGCCGCTaGCGATTTATCCTTAGACCTCCTGGCCTTCTATGC +
Preference number: 3 (lower is better)
Translates to: ASSSRSYPTFCR*RFILRPPGLLC
Trigger: GCATAGAAGGCCAGGAGGTCTAAGGATAAATCGCCAGCGGCAGAATGTGGGGTAGCTCCTGGAAGACGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp ACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCCAGTGACTTTCAACAT +
Preference number: 3 (lower is better)
Translates to: TPAGHSQEGTAR*TSGTPSSDFQH
Trigger: ATGTTGAAAGTCACTGGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CCA 72 bp GGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATaGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTG +
Preference number: 3 (lower is better)
Translates to: GEAALLPPAFQE*GRSSLAKVWRL
Trigger: CAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp CTGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAAAGGAGCCTGTCATCGTaGCTTATTTTTGGTTTTGGC +
Preference number: 3 (lower is better)
Translates to: LAPFNFEPQMPASLFLAQRSLSS*LIFGFG
Trigger: GCCAAAACCAAAAATAAGCAACGATGACAGGCTCCT...TTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGAACCCAGGTCTGTGTaGATGTTCTCTGTCAGAGGA +
Preference number: 3 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWEPRSV*MFSVRG
Trigger: TCCTCTGACAGAGAACATCAACACAGACCTGGGTTC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp GAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTaGTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAA +
Preference number: 3 (lower is better)
Translates to: EGVARRSSFATS*FPGMGKEFPSK
Trigger: TTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 72 bp TCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAG +
Preference number: 3 (lower is better)
Translates to: SKPSGRLKFRAG*LQTTLSSSPQE
Trigger: CTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CCA 72 bp TTTGCTCCAGGACAGACCCCAAGCAACGTGGCCAAGTaGTACCACTGTGTCACTTGGTACAAGCGTTTCCAA +
Preference number: 3 (lower is better)
Translates to: FAPGQTPSNVAK*YHCVTWYKRFQ
Trigger: TTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCCTGGAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTTTCCATTCTCCCAACTaGTTCTCGAAGTTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSFHSPN*FSKLCC
Trigger: ACAGCACAACTTCGAGAACAAGTTGGGAGAATGGAA...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTACCCTTTTGTTCTGCTaGCAGTTGGTCACATCTTTC +
Preference number: 3 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSTLLFC*QLVTSF
Trigger: GAAAGATGTGACCAACTGCAAGCAGAACAAAAGGGT...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACACAGAAAGACAACTTCTaGCCGAGTTGCCTGAACCTG +
Preference number: 3 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTQKDNF*PSCLNL
Trigger: CAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTCTG...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCGTTCTGTCTCGTACGTaGACAGCATCACTGAGTTCT +
Preference number: 3 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSVLSRT*TASLSS
Trigger: AGAACTCAGTGATGCTGTCAACGTACGAGACAGAAC...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGAACAGATTTCAAGATTaGCTCCAGGACAGACCCCAA +
Preference number: 3 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWNRFQD*LQDRPQ
Trigger: TTGGGGTCTGTCCTGGAGCAAATCTTGAAATCTGTT...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCATGGGCCAGGCATTTaGTCCAGAGTCCTAAAAACA +
Preference number: 3 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVHGPGI*SRVLKT
Trigger: TGTTTTTAGGACTCTGGACAAAATGCCTGGCCCATG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGCAGCTGAAGCAGCAATaGAAGATGAATGAACGAGCT +
Preference number: 3 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWQLKQQ*KMNERA
Trigger: AGCTCGTTCATTCATCTTCAATTGCTGCTTCAGCTG...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 72 bp TTTCAAGATTTGCTCCAGGACAGACCCCAAGCAACGTaGCCAAGTGGTACCACTGTGTCACTTGGTACAAGC +
Preference number: 3 (lower is better)
Translates to: FQDLLQDRPQAT*PSGTTVSLGTS
Trigger: GCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCCTGGAGCAAATCTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCTTCAGTAAGACCCTTTaGTTCTGCTTGCAGTTGGTC +
Preference number: 3 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSFSKTL*FCLQLV
Trigger: GACCAACTGCAAGCAGAACAAAAGGGTCTTACTGAA...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACAGGTCATTTCACAGACTaGCCCCTTTGTTACTATGTC +
Preference number: 3 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTGHFTD*PLCYYV
Trigger: GACATAGTAACAAAGGGGCAAGTCTGTGAAATGACC...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCGGCCTTCTATGCCTCTaGCTCCCTAGCGTGAGGGTA +
Preference number: 3 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGGLLCL*LPSVRV
Trigger: TACCCTCACGCTAGGGAGCAAGAGGCATAGAAGGCC...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 72 bp AGTAGCTCCTGGTCAGAAAGTGCAGTAAAGGGTGCATaGAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTA +
Preference number: 3 (lower is better)
Translates to: SSSWSESAVKGA*KHPLYGLLSGL
Trigger: TAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAGGAGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396319.6
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
3UTR GCA 72 bp CACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTACGTTGACAGCATCACT +
Preference number: 3 (lower is better)
Translates to: HFLVFQACSMQV*HRSVSYVDSIT
Trigger: AGTGATGCTGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATTGTTGGGAAGCCCTaGCCCTGGTCTCTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: FQCILYGGPPIPGILYTLIVGKP*PWSLRW
Trigger: CCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAAT...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATGTTTCACCCAAGGACTaGGTGGTAAGCTGCTGCCGA +
Preference number: 3 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHVSPKD*VVSCCR
Trigger: TCGGCAGCAGCTTACCACCAAGTCCTTGGGTGAAAC...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 72 bp TCAAAGCAAAAGCCTGTCCCATGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCAGTAGGCACATTCTCA +
Preference number: 3 (lower is better)
Translates to: SKQKPVPCPRKC*LGGSGAVGTFS
Trigger: TGAGAATGTGCCTACTGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCATGGGACAGGCTTTTGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR TCA 72 bp AAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATaGACCCAGGTCTGTGTTGATGTTCTCTGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: KWLVLHLTKAKA*TQVCVDVLCQR
Trigger: CCTCTGACAGAGAACATCAACACAGACCTGGGTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 72 bp CCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTaGTACAAGCGTTTCCAAACCGGCTCTCTTTATTTA +
Preference number: 3 (lower is better)
Translates to: PSNVAKWYHCVT*YKRFQTGSLYL
Trigger: TAAATAAAGAGAGCCGGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGTTGTTCTCTTTCATGTaGTGCCTTCTTGAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWLFSFM*CLLEFV
Trigger: GACAAACTCAAGAAGGCACAACATGAAAGAGAACAA...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATCAGTGTTCTGCTCATTaGGGAGTGTCAGGCACTAGC +
Preference number: 3 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHQCSAH*GVSGTS
Trigger: GCTAGTGCCTGACACTCCCAAATGAGCAGAACACTG...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp TCAGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTTTGTCAGCAATTTCTTaGGTCATTTCACAGACTTGC +
Preference number: 3 (lower is better)
Translates to: SGRLKFRAGWLQTTLSSSLSAIS*VISQTC
Trigger: GCAAGTCTGTGAAATGACCAAAGAAATTGCTGACAA...ACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCCTTTTGGAATTATTTaGTTTGGTTTCACAACAGGC +
Preference number: 3 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVPFGII*FGFTTG
Trigger: GCCTGTTGTGAAACCAAACAAAATAATTCCAAAAGG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp GAGTTCTTTAGCCAGAAAGACAACTTCTTGCCGAGTTaGCTGAACCTGTTCCTCTGCTTTACGAAGTTGCTC +
Preference number: 3 (lower is better)
Translates to: EFFSQKDNFLPS*LNLFLCFTKLL
Trigger: GAGCAACTTCGTAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTCTGGCTAAAGAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR GCA 72 bp TGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTGTCTCGTACGTTGACA +
Preference number: 3 (lower is better)
Translates to: CFFTFSFSKRAV*RSAIVLSRTLT
Trigger: TGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGCAACTTCTTGCCGAGTaGCCTGAACCTGTTCCTCTG +
Preference number: 3 (lower is better)
Translates to: AFSLSSATASANCFFTFSQLLAE*PEPVPL
Trigger: CAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTG...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCGTACCACTGTGTCACTaGGTACAAGCGTTTCCAAAC +
Preference number: 3 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGVPLCH*VQAFPN
Trigger: GTTTGGAAACGCTTGTACCAAGTGACACAGTGGTAC...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACCAGAAGTGTTCCAACTaGCAGGGTAAGCTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: ENKSQVACPSPNESKGMNQKCSN*QGKLCV
Trigger: GACACACAGCTTACCCTGCAAGTTGGAACACTTCTG...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp AGATGGCATTGCTTACACTGCCTTCCATGTTTTCAGTaGATACTCTATGGAGGTCCTCCTATCCCAGGTATT +
Preference number: 3 (lower is better)
Translates to: RWHCLHCLPCFQ*ILYGGPPIPGI
Trigger: AATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGTGTAAGCAATGCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCAAGCAGGAAAGTTCTTaGCAGATTTTCCTTTTCAGC +
Preference number: 3 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSAKQESS*QIFLFS
Trigger: GCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCTT...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACAAACAAAAGTCCATCTaGTCGCAACCGAGGGAGATG +
Preference number: 3 (lower is better)
Translates to: ENKSQVACPSPNESKGMNKQKSI*SQPREM
Trigger: CATCTCCCTCGGTTGCGACAAGATGGACTTTTGTTT...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCCTGCAAGGAAGAGACTaGTGCCTGTTTCATGAAAGA +
Preference number: 3 (lower is better)
Translates to: FQCILYGGPPIPGILYTLLQGRD*CLFHER
Trigger: TCTTTCATGAAACAGGCACAAGTCTCTTCCTTGCAG...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CCA 72 bp AAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATaGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTT +
Preference number: 3 (lower is better)
Translates to: KCSKGCMKASAL*SPQWSILGVVF
Trigger: AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000396319.6
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
3UTR CCA 72 bp CTTACACTGCCTTCCATGTTTTCAGTGCATACTCTATaGAGGTCCTCCTATCCCAGGTATTCTATACACACT +
Preference number: 3 (lower is better)
Translates to: LTLPSMFSVHTL*RSSYPRYSIHT
Trigger: AGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGTGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAATGCTTATTTTTGGTTTaGGCCCCAGAGCAAGTCTTC +
Preference number: 3 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKCLFLV*APEQVF
Trigger: GAAGACTTGCTCTGGGGCCAAAACCAAAAATAAGCA...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR TCA 72 bp GCTTTATGTGTTACTGACACAATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCATCACTGAACCTCTTC +
Preference number: 3 (lower is better)
Translates to: ALCVTDTISSSS*WALDVASLNLF
Trigger: GAAGAGGTTCAGTGATGCTACATCCAAAGCCCATCAGCTTGAGGAAGATATTGTGTCAGTAACACATAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CCA 72 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATaGCCAAGTACAGCAGAATTTATTGAAACCCACATT +
Preference number: 3 (lower is better)
Translates to: AFPNRLSLFREL*PSTAEFIETHI
Trigger: AATGTGGGTTTCAATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR GCA 72 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTaGTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTA +
Preference number: 3 (lower is better)
Translates to: AFSLSSATASAN*FFTFSFSKRAV
Trigger: TACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR-3UTR CAA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGCAACTGACATTCAAGTaGTTCTCTTTCATGTTGTGC +
Preference number: 3 (lower is better)
Translates to: AFSLSSATASANCFFTFSQLTFK*FSFMLC
Trigger: GCACAACATGAAAGAGAACAACTTGAATGTCAGTTG...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR TCA 72 bp ACAGACTGCTTCGAATTCCATCTCAGTATTAAATGGTaGAGAGCCAGCAACTCAAAGGAGATTAAAAGGGAA +
Preference number: 3 (lower is better)
Translates to: TDCFEFHLSIKW*RASNSKEIKRE
Trigger: TTCCCTTTTAATCTCCTTTGAGTTGCTGGCTCTTCACCATTTAATACTGAGATGGAATTCGAAGCAGTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR-3UTR CAA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGTGTGCCTTCTTGAGTTaGTCCTTTAAACTGTCTAAT +
Preference number: 3 (lower is better)
Translates to: AFSLSSATASANCFFTFSCAFLS*SFKLSN
Trigger: ATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACA...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGCCCTGGTGCCGGGAGTaGCCTCTCCCTGGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLPWCRE*PLPGPS
Trigger: TGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGG...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGCTGGGCCGTCAGCGCTaGTCTGCCACGGCCACATCT +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLLGRQR*SATATS
Trigger: AGATGTGGCCGTGGCAGAGCAGCGCTGACGGCCCAG...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGGGAGTCGGACAGCGATaGGTCCTGGACCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLGVGQR*VLDHRE
Trigger: CTCTCTGTGGTCCAGGACTCATCGCTGTCCGACTCC...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCCGCAGCCCCTACGCTaGCCACCGCAGGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRPQPLR*PPQALW
Trigger: CCAGAGGGCCTGCGGTGGGCAGCGTAGGGGCTGCGG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGAGCAAGTCTTCCCTGTaGCTTTGCAGCCACAGGCTG +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLSKSSL*LCSHRL
Trigger: CAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGATCCCCCAGTTGGTCTaGGGTGCCCCACCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWIPQLV*GAPPSP
Trigger: GGGGGAGGGTGGGGCACCTCAGACCAACTGGGGGAT...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGCGGGCTGATCGCTTTTaGTCCAGTGGAGTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLRADRF*SSGVLK
Trigger: CTTCAAAACTCCACTGGATCAAAAGCGATCAGCCCG...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGCATCTGAGCGCCTGTaGCTCGAGTCCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWASERL*LESRSP
Trigger: GGGGCTGCGGGACTCGAGTCACAGGCGCTCAGATGC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGAAGGGGACAGTGTTCTaGTCATTTGGGAGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLKGTVF*SFGSVR
Trigger: CCTGACACTCCCAAATGAGCAGAACACTGTCCCCTT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCGCAGGCCCTCTGGCTaGCGCCTGGTGCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVRRPSG*RLVLWT
Trigger: CGTCCACAGCACCAGGCGGCAGCCAGAGGGCCTGCG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCTCCTGTCCTGGAAGTaGCCGGGTGAACCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRLLSWK*PGEPVG
Trigger: CCCCACAGGTTCACCCGGCCACTTCCAGGACAGGAG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCCACCGCAGGCCCTCTaGCTGCCGCCTGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDPPQAL*LPPGAV
Trigger: CACAGCACCAGGCGGCAGCCAGAGGGCCTGCGGTGG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACGGGAATAGCCGTGTTTaGAGTCCCCTGGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNGNSRV*SPLVPG
Trigger: TCCCGGCACCAGGGGACTGCAAACACGGCTATTCCC...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGAGAAGTGTTCCAACTTaGAGGGTAAGCTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLRSVPT*RVSCVS
Trigger: GGACACACAGCTTACCCTGCAAGTTGGAACACTTCT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGGCTCTGAGCCCCAGCTaGGCTCCCTCCTGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVALSPS*APSWPL
Trigger: CAGAGGCCAGGAGGGAGCGCAGCTGGGGCTCAGAGC...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGGGAGTGCCCTCTCCCTaGGCCGTCAGCGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVGVPSP*AVSAAL
Trigger: CAGAGCAGCGCTGACGGCCCAGGGAGAGGGCACTCC...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGGCAGGCTTCCGATCCTaGTCCGCCATCAGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWAGFRS*SAISRR
Trigger: TCGGCGGCTGATGGCGGATCAGGATCGGAAGCCTGC...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGAGGGGACACTTCTTGTaGACATCAAAGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLRGHFL*TSKLES
Trigger: TGATTCCAGCTTTGATGTTCACAAGAAGTGTCCCCT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAAGAACCTGTGGGGAGATaGGCGCTCCTGACAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LAPFNFEPQMPASLFLAQEPVGR*ALLTVL
Trigger: AAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTC...TTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGATAAAAGAGAATCCCTaGTTCCTGTCTGAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: GHPTPCQGREWVPASERLIKENP*FLSELR
Trigger: ACGCAGCTCAGACAGGAAGCAGGGATTCTCTTTTAT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCGGCGTCCCTGTTCCTaGCGCAACTGGCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRRRPCS*RNWLFK
Trigger: TTTGAAGAGCCAGTTGCGCCAGGAACAGGGACGCCG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACAGACCCCAAGCAACGTaGCCAAGTGGTACCACTGTG +
Preference number: 4 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNRPQAT*PSGTTV
Trigger: CACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCT...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGGTGGCGTCACTTGCCTaGGCTCACAGTGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKVASLA*AHSALS
Trigger: GCTCAGAGCACTGTGAGCCCAGGCAAGTGACGCCAC...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGCAGAGGACAGAGGCTaGCCCAGGGGCTTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDAEDRG*PRGFGD
Trigger: GTCACCAAAGCCCCTGGGCCAGCCTCTGTCCTCTGC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGTGCAGGCAGCGAGTATaGCGAGGAGGAGGTGGACTA +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKCRQRV*RGGGGL
Trigger: TAGTCCACCTCCTCCTCGTCATACTCGCTGCCTGCA...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAAGGAGATGAGCGCTCCTaGCAGTCCTTGCACTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIEGDERS*QSLHFS
Trigger: AGAGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCC...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAACGCAACCGAGGGAGATaGCTAGTTTCACCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIERNRGR*LVSPKD
Trigger: GTCCTTGGGTGAAACTAGTCATCTCCCTCGGTTGCG...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAGGGCTCACAGTGCTCTaGGCCCCAGCTGCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVGLTVL*APAALP
Trigger: AGGGAGCGCAGCTGGGGCTCAGAGCACTGTGAGCCC...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTGCCGACAGTAGGCCTTaGGTCACTTCCGCCCACGGG +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPADSRP*VTSAHG
Trigger: CCCGTGGGCGGAAGTGACGCAAGGCCTACTGTCGGC...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433216.6
CDS-3UTR GCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACAGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCC +
Preference number: 4 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTEGTAR*TSGTPS
Trigger: GGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTC...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCC +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDEGTAR*TSGTPS
Trigger: GGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAATTGGTGGTAAGCTGCTaGCGAGTGGTGTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIELVVSC*RVVCVP
Trigger: TGGGACACACACCACTCGGCAGCAGCTTACCACCAA...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CTGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAAATGACGAGGAGGAGGTaGACTATGAGGAGTCGGACA +
Preference number: 4 (lower is better)
Translates to: LAPFNFEPQMPASLFLAQMTRRR*TMRSRT
Trigger: TGTCCGACTCCTCATAGTCCACCTCCTCCTCGTCAT...TTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGAGCAACGTGGCCAAGTaGTACCACTGTGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRSNVAK*YHCVTW
Trigger: CCAAGTGACACAGTGGTACCACTTGGCCACGTTGCT...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTCCCAAGAGGGGACTCTaGCAGGTGGCCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSPKRGL*QVAFVF
Trigger: AAATACAAAGGCCACCTGTCAGAGTCCCCTCTTGGG...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGTTCAACGCCTCGGGCTaGTCGCTTTTGATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWFNASG*SLLIQW
Trigger: CCACTGGATCAAAAGCGATCAGCCCGAGGCGTTGAA...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGGAACGCAGGGCTCCTaGTTCCAGGGTTGTAAGGGA +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDGTQGS*FQGCKG
Trigger: TCCCTTACAACCCTGGAAGCAGGAGCCCTGCGTTCC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGCAGGCAGGCCCCTGGTaGAATGTAGCCTCACACCTG +
Preference number: 4 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVQAGPW*NVASHL
Trigger: CAGGTGTGAGGCTACATTGCACCAGGGGCCTGCCTG...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATGCCCTGCCTGGGGCTaGATACCACGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVCPAWG*IPRAFP
Trigger: GGGGAAGGCACGTGGTATCCAGCCCCAGGCAGGGCA...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGCAGATGGGGCCTGTCTaGTCCTGGAGTCTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWQMGPV*SWSLSC
Trigger: ACAAGAGAGACTCCAGGACCAGACAGGCCCCATCTG...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGCTTGGAGGTGGGGGCTaGAGTGTGCTTTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVLGGGG*SVLCSF
Trigger: GAAGGAGCAAAGCACACTCCAGCCCCCACCTCCAAG...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGCAGGCTTCCGATCCTaGTCCGCCATCAGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVAGFRS*SAISRR
Trigger: TCGGCGGCTGATGGCGGATCAGGATCGGAAGCCTGC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433216.6
CDS-3UTR TCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGCTAGCATGGGGAGTGTaGGGAGCCTGTCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVLAWGV*GACHRC
Trigger: GCAACGATGACAGGCTCCTCACACTCCCCATGCTAG...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGAAAGAGGCTGCCTGTTaGAGTGGTTCTCCATCCCTG +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKKEAAC*SGSPSL
Trigger: CAGGGATGGAGAACCACTTCAACAGGCAGCCTCTTT...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAATTCTGCAGTGAGTGTTaGGAGATAGCAGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LAPFNFEPQMPASLFLAQFCSEC*EIAAEA
Trigger: TGCTTCAGCTGCTATCTCTCAACACTCACTGCAGAA...TTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCC +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQEGTAR*TSGTPS
Trigger: GGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTC...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGGGCTGGAGTGTGCTTTaGTCCTTCTCTGAGCTTAAA +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRGWSVL*SFSELK
Trigger: TTTAAGCTCAGAGAAGGAGCAAAGCACACTCCAGCC...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAAGGGCCTGTCTGGTCCTaGAGTCTCTCTTGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIEGPVWS*SLSCVF
Trigger: AAAAACACAAGAGAGACTCCAGGACCAGACAGGCCC...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAAGGTGCTGTGGACGCCTaGTTAATAAAAGGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIEGAVDA*LIKGEH
Trigger: ATGCTCCCCTTTTATTAACCAGGCGTCCACAGCACC...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAAGCAGGAGTAAAAGCTTaGGAGGGTGTTGCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIEAGVKA*EGVARR
Trigger: TCTCCTAGCAACACCCTCCCAAGCTTTTACTCCTGC...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCTCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSSKRAV*RSAIVL
Trigger: CAGAACGATGGCAGACCTGCATACTGCACGCTTGGA...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAAGGGACGCGAATGGGTaGCAGCATCTGAGCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVRDANG*QHLSAC
Trigger: ACAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCT...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCAAAGGTGTGGAGACTaGTGGGGATTTGTTCATTCT +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRQRCGD*WGFVHS
Trigger: AGAATGAACAAATCCCCAGCAGTCTCCACACCTTTG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAAACCCAGGCAGGCCCCTaGTGCAATGTAGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAETQAGP*CNVASH
Trigger: GTGTGAGGCTACATTGCACCAGGGGCCTGCCTGGGT...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCCTTCCTGCCCTGCCTaGGGCTGGATACCACGTGCC +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGPSCPA*GWIPRA
Trigger: GGCACGTGGTATCCAGCCCCAGGCAGGGCAGGAAGG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGTCTTGCCGAGTTGCCTaGACCTGTTCCTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWSCRVA*TCSSAL
Trigger: TAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGA...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGTGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWCPRKC*LGGSGA
Trigger: TGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCA...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCTGGAAGTGGCCGGGTaGACCTGTGGGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGLEVAG*TCGEMS
Trigger: GCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAAAAGTGTCGCATGAGCTaGAGGGCAGATGCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAEKCRMS*RADAVP
Trigger: AGGCACCGCATCTGCCCTTCAGCTCATGCGACACTT...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCAACTTCTTGCCGAGTTaGCTGAACCTGTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSNFLPS*LNLFLC
Trigger: GCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTT...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVEGTAR*TSGTPS
Trigger: GGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGAGAAGCCTTTTGCCTaGCCAGTTCCTTTCAAACAC +
Preference number: 4 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWEKPFA*PVPFKH
Trigger: GTGTTTGAAAGGAACTGGGCAGGCAAAAGGCTTCTC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGCTTCCTGTCTGAGCTaGGTAACTGTGATGGGTCAG +
Preference number: 4 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVASCLS*VTVMGQ
Trigger: CTGACCCATCACAGTTACGCAGCTCAGACAGGAAGC...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCCATCCCTGCCGTCTTaGAAAGAAGTCAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDPSLPS*KEVSRV
Trigger: CACTCTACTGACTTCTTTGCAAGACGGCAGGGATGG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGAAGAGCAAAAGAGGCTaGCTGTTGAAGTGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKKSKRG*LLKWFS
Trigger: GGAGAACCACTTCAACAGGCAGCCTCTTTTGCTCTT...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCGGGCTGGATACCACGTaGCTTCCCCCTGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGGLDTT*LPPETQ
Trigger: CTGCGTCTCAGGGGGAAGGCACGTGGTATCCAGCCC...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATTCAGTGCATACTCTATaGAGGTCCTCCTATCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDSVHTL*RSSYPR
Trigger: CCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGCCCAAGAGGGGACTCTaGCAGGTGGCCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQPKRGL*QVAFVF
Trigger: AAATACAAAGGCCACCTGTCAGAGTCCCCTCTTGGG...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACCACGTGCCTTCCCCCTaGGACGCAGACAGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNHVPSP*DADSVG
Trigger: GCCTACACTGTCTGCGTCTCAGGGGGAAGGCACGTG...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGCCCAGGGGCTTTGGTaGCTTAGTTTTAGGGTATTT +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDAQGLW*LSFRVF
Trigger: AAATACCCTAAAACTAAGTCACCAAAGCCCCTGGGC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQSKRAV*RSAIVL
Trigger: CAGAACGATGGCAGACCTGCATACTGCACGCTTGGA...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCC +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFEGTAR*TSGTPS
Trigger: GGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGAAATGGGTCTGCACATaGCTTTCAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWKWVCT*LSNTCW
Trigger: CCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTT...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTACTGGACCACAGAGAGTaGCATCAGCTCCGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVLDHRE*HQLRSH
Trigger: ATGGCTTCGGAGCTGATGGCACTCTCTGTGGTCCAG...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTCCGTCAGCGCTGCTCTaGCACGGCCACATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PNRLSLFRELWPSTAEFIPSALL*HGHISC
Trigger: ACAGGAGATGTGGCCGTGGCAGAGCAGCGCTGACGG...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTTTTGCAGTCCCCTGGTaGCGGGAGTGCCCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: PNRLSLFRELWPSTAEFIFAVPW*RECPLP
Trigger: AGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAA...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTGTTGGGAAGCCCTTaGCCTGGTCTCTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAELLGSP*PGLLGG
Trigger: CCCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAA...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGGGAGCCTGTCATCGTTaGTTATTTTTGGTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKGACHR*LFLVLA
Trigger: GGCCAAAACCAAAAATAAGCAACGATGACAGGCTCC...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGGACTTCAAAACAGACTaGTTCGAATTCCATCTCAGT +
Preference number: 4 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRDFKTD*FEFHLS
Trigger: ACTGAGATGGAATTCGAAGCAGTCTGTTTTGAAGTC...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGTGGCATTGCTTACACTaGCTTCCATGTTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKWHCLH*LPCFQC
Trigger: GCACTGAAAACATGGAAGGCAGTGTAAGCAATGCCA...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATCTGGCTGCCGCCTGGTaGTGTGGACGCCTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHLAAAW*CGRLVN
Trigger: ATTAACCAGGCGTCCACAGCACCAGGCGGCAGCCAG...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACAAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTKFRAG*LQTTLS
Trigger: AGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTT...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGGGAAGCCCTTGCCCTaGTCTCTTAGGTGGGAACGC +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLGKPLP*SLRWER
Trigger: GCGTTCCCACCTAAGAGACCAGGGCAAGGGCTTCCC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGCCCAGCATGTTCCTCTaGTTTAAAAAGGGGACTGTT +
Preference number: 4 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKPSMFL*FKKGTV
Trigger: AACAGTCCCCTTTTTAAACCAGAGGAACATGCTGGG...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGGAAAGGATGTCATTGTaGATCCAGTGGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWERMSL*IQWKDS
Trigger: GGAGTCTTTCCACTGGATTCACAATGACATCCTTTC...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACGCAGGAAGTGTCGCATaGGCTGAAGGGCAGATGCGG +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNAGSVA*AEGQMR
Trigger: CCGCATCTGCCCTTCAGCTCATGCGACACTTCCTGC...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACATGGGTGCCAGCATCTaGGCGCCTGTGACTCGAGTC +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNMGASI*APVTRV
Trigger: GACTCGAGTCACAGGCGCTCAGATGCTGGCACCCAT...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACATCAGCCAAACATAACTaGAGCCTGCCAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTSAKHN*SLPISS
Trigger: AGAAGAGATTGGCAGGCTGCAGTTATGTTTGGCTGA...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTAGCAGGAAAGTTCTTTaGAGATTTTCCTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSSRKVL*RFSFSA
Trigger: GGCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCT...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCTGAACCTGTTCCTCTaGTTTACGAAGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSLNLFL*FTKLLL
Trigger: AAGGAGCAACTTCGTAAAGCAGAGGAACAGGTTCAG...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGAACTTCTTGCCGAGTTaGCTGAACCTGTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQNFLPS*LNLFLC
Trigger: GCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTT...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATACAGATTTCAAGATTTaGTCCAGGACAGACCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDTDFKI*SRTDPK
Trigger: CTTGGGGTCTGTCCTGGAGCAAATCTTGAAATCTGT...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CCCAGAGCAAGTCTTCCCTGTGCCTTTGCAGCCACAGGCTGGGTTGCCATAGAATTACAAAGATGGCATTaGTTACACTGCCTTCCATGT +
Preference number: 4 (lower is better)
Translates to: PRASLPCAFAATGWVAIELQRWH*LHCLPC
Trigger: ACATGGAAGGCAGTGTAAGCAATGCCATCTTTGTAA...TTCTATGGCAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGACTTGCTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTCCTTTGTATTTCATCTaGGTAAAAAGCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSPLYFI*VKSTIC
Trigger: GCAGATGGTGCTTTTTACCCAGATGAAATACAAAGG...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGGGGACTCTGACAGGTaGCCTTTGTATTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVGDSDR*PLYFIW
Trigger: CCAGATGAAATACAAAGGCCACCTGTCAGAGTCCCC...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATCCACATCTCCTGTCCTaGAAGTGGCCGGGTGAACCT +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHPHLLS*KWPGEP
Trigger: AGGTTCACCCGGCCACTTCCAGGACAGGAGATGTGG...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAACCCTGGTCTCTTAGGTaGGAACGCAGGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKPWSLR*ERRAPA
Trigger: AGCAGGAGCCCTGCGTTCCCACCTAAGAGACCAGGG...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAACTAGCTGTGAATTGTTaGGAAGCCCTTGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAELAVNC*EALALV
Trigger: GACCAGGGCAAGGGCTTCCCAACAATTCACAGCTAG...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTTGCAGCCACAGGCTaGGTTGCCATAGAACCGAGT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVFAATG*VAIEPS
Trigger: ACTCGGTTCTATGGCAACCCAGCCTGTGGCTGCAAA...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTTGTCAGGGACGCGAATaGGTGCCAGCATCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: PNRLSLFRELWPSTAEFICQGRE*VPASER
Trigger: GCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACA...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 72 bp CACAGGCTGGGTTGCCATAGAACCGAGTTAATGTTCTaGCTCCGCCAACTCCTAGCTGTGAATTGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HRLGCHRTELMF*LRQLLAVNCWE
Trigger: TTCCCAACAATTCACAGCTAGGAGTTGGCGGAGCAAGAACATTAACTCGGTTCTATGGCAACCCAGCCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 72 bp CCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTaGGTACAAGCGTTTCCAAACCGGCTCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: PKQRGQVVPLCH*VQAFPNRLSLF
Trigger: AAATAAAGAGAGCCGGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCCCAAGAGGGGACTCTaGCAGGTGGCCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVPKRGL*QVAFVF
Trigger: AAATACAAAGGCCACCTGTCAGAGTCCCCTCTTGGG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGCAGTAAAGGGTGCATaGAAGCATCCGCTCTATGGT +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCAVKGA*KHPLYG
Trigger: ACCATAGAGCGGATGCTTTCATGCACCCTTTACTGC...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAGTCTTTCTAACTTTCTaGAGTCCCGCTGGAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVVFLTF*SPAGGA
Trigger: AGCTCCTCCAGCGGGACTTCAGAAAGTTAGAAAGAC...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRCSMQV*HRSVSY
Trigger: GTACGAGACAGAACGATGGCAGACCTGCATACTGCA...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACATTCTTTATAATGGTCTaGAGCCATCTGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTFFIMV*SHLKTE
Trigger: CTCCGTCTTCAGATGGCTGCAGACCATTATAAAGAA...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTTCGAGCAGGCTGGCTaGAGACAACATTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCFEQAG*RQHCLP
Trigger: TGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTAAATGGGTCTGCACATaGCTTTCAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPKWVCT*LSNTCW
Trigger: CCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCTTCCATGTTTTCAGTaGATACTCTATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDLPCFQ*ILYGGP
Trigger: AGGACCTCCATAGAGTATGCACTGAAAACATGGAAG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAAGAGGTGGCGTCACTTaGCTGGGCTCACAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKRGGVT*LGSQCS
Trigger: AGAGCACTGTGAGCCCAGGCAAGTGACGCCACCTCT...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQKFRAG*LQTTLS
Trigger: AGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTT...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGACAGCGATGAGTCCTaGACCACAGAGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLDSDES*TTESAI
Trigger: GATGGCACTCTCTGTGGTCCAGGACTCATCGCTGTC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAGGCTGCCTGTTGAAGTaGTTCTCCATCCCTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKGCLLK*FSIPAV
Trigger: GACGGCAGGGATGGAGAACCACTTCAACAGGCAGCC...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
3UTR CAA 72 bp GCAGTATGCAGGTCTGCCATCGTTCTGTCTCGTACGTaGACAGCATCACTGAGTTCTTTAGCCAGAAAGACA +
Preference number: 4 (lower is better)
Translates to: AVCRSAIVLSRT*TASLSSLARKT
Trigger: TGTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATGGCAGACCTGCATACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGCTCTTGGCCACATTTTaGAAGATGACATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVLLATF*KMTWAK
Trigger: CTTTGCCCATGTCATCTTTCAAAATGTGGCCAAGAG...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACATACTCCATCCAACCTTaGATATACCAACCCAATCTT +
Preference number: 4 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTYSIQP*IYQPNL
Trigger: AAGATTGGGTTGGTATATTCAAGGTTGGATGGAGTA...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCA +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQISSSS*WALDVA
Trigger: TGCTACATCCAAAGCCCATCAGCTTGAGGAAGATAT...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTACCCAAGAGGGGACTCTaGCAGGTGGCCTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILPKRGL*QVAFVF
Trigger: AAATACAAAGGCCACCTGTCAGAGTCCCCTCTTGGG...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVCPRKC*LGGSGA
Trigger: TGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTAGGGGACACTTCTTGTaGACATCAAAGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPRGHFL*TSKLES
Trigger: TGATTCCAGCTTTGATGTTCACAAGAAGTGTCCCCT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGCAGTAAAGGGTGCATaGAAGCATCCGCTCTATGGT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVAVKGA*KHPLYG
Trigger: ACCATAGAGCGGATGCTTTCATGCACCCTTTACTGC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCAATGACATTCCAGGTGTaGATTAGGAAGGTAACTCTT +
Preference number: 4 (lower is better)
Translates to: HMPFKHLLVIVRRELLAAMTFQV*IRKVTL
Trigger: AAGAGTTACCTTCCTAATGCACACCTGGAATGTCAT...TGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGCTGGAAAGGTGTACTTaGTCCACGAATTTCACCCTT +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVLERCT*STNFTL
Trigger: AAGGGTGAAATTCGTGGAGCAAGTACACCTTTCCAG...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR GCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTCAGCCAAACATAACTaGAGCCTGCCAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQSAKHN*SLPISS
Trigger: AGAAGAGATTGGCAGGCTGCAGTTATGTTTGGCTGA...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGCTGAACCTGTTCCTCTaGTTTACGAAGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQLNLFL*FTKLLL
Trigger: AAGGAGCAACTTCGTAAAGCAGAGGAACAGGTTCAG...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTAACTTCTTGCCGAGTTaGCTGAACCTGTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVNFLPS*LNLFLC
Trigger: GCAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTT...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVCSMQV*HRSVSY
Trigger: GTACGAGACAGAACGATGGCAGACCTGCATACTGCA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCCAAGCGTGCAGTATaGAGGTCTGCCATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFSKRAV*RSAIVL
Trigger: CAGAACGATGGCAGACCTGCATACTGCACGCTTGGA...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCTCGTTTTCCAAGCGTaGAGTATGCAGGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVLVFQA*SMQVCH
Trigger: ATGGCAGACCTGCATACTGCACGCTTGGAAAACGAG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGCATTCTCATCTTCTTTaGTATCCTCAGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWHSHLL*YPQSPL
Trigger: TAGAGGACTCTGAGGATAGCAAAGAAGATGAGAATG...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTAAATGGGTCTGCACATaGCTTTCAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCKWVCT*LSNTCW
Trigger: CCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGAAGTGCAGTAAAGGGTaGATGAAAGCATCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVKCSKG*MKASAL
Trigger: TAGAGCGGATGCTTTCATGCACCCTTTACTGCACTT...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTGAAGAAGCTCGAAACTaGAAAGGTGTACTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPEEARN*KGVLAP
Trigger: TGGAGCAAGTACACCTTTCCAGTTTCGAGCTTCTTC...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGGGGACTCTGACAGGTaGCCTTTGTATTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVGDSDR*PLYFIW
Trigger: CCAGATGAAATACAAAGGCCACCTGTCAGAGTCCCC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCKFRAG*LQTTLS
Trigger: AGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTAAAGCATCCGCTCTATaGTCTCCTCAGTGGTCTATT +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPKASAL*SPQWSI
Trigger: AATAGACCACTGAGGAGACCATAGAGCGGATGCTTT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGAAAGCATCCGCTCTATaGTCTCCTCAGTGGTCTATT +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVKASAL*SPQWSI
Trigger: AATAGACCACTGAGGAGACCATAGAGCGGATGCTTT...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGCCACATTTTGAAAGATaGCATGGGCAAAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVPHFER*HGQSWK
Trigger: CTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGG...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCCTCTTGGCCACATTTTaGAAGATGACATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSALLATF*KMTWAK
Trigger: CTTTGCCCATGTCATCTTTCAAAATGTGGCCAAGAG...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTCTCTTGGCCACATTTTaGAAGATGACATGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCLLATF*KMTWAK
Trigger: CTTTGCCCATGTCATCTTTCAAAATGTGGCCAAGAG...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATCTTGCCGAGTTGCCTaGACCTGTTCCTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILSCRVA*TCSSAL
Trigger: TAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGGTCTGTGTTTACTaGAGCATCATTCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQWVCVY*SIIHFL
Trigger: CAGAAAGTGAATGATGCTTCAGTAAACACAGACCCA...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFCPRKC*LGGSGA
Trigger: TGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCA...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATGCCCACGTAAATGTTaGCTTGGAGGATCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILCPRKC*LGGSGA
Trigger: TGCTCCTGATCCTCCAAGTCAACATTTACGTGGGCA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTAGGGGACACTTCTTGTaGACATCAAAGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCRGHFL*TSKLES
Trigger: TGATTCCAGCTTTGATGTTCACAAGAAGTGTCCCCT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATTGCACAGAGTGTGCCTaGAACATCATAGGCACTGAG +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHCTECA*NIIGTE
Trigger: CTCAGTGCCTATGATGTTTCAGGCACACTCTGTGCA...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCAACCCAGGTCTGTGTTaGTGTTCTCTGTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLNPGLC*CSLSED
Trigger: GTCCTCTGACAGAGAACATCAACACAGACCTGGGTT...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTGTTCATTCTGCAGTaGGTGTTGAGAGATAGCAGC +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVLFILQ*VLRDSS
Trigger: GCTGCTATCTCTCAACACTCACTGCAGAATGAACAA...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTCAGCCAAACATAACTaGAGCCTGCCAATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCSAKHN*SLPISS
Trigger: AGAAGAGATTGGCAGGCTGCAGTTATGTTTGGCTGA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGCAGTATGCAGGTCTaGCATCGTTCTGTCTCGTAC +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFCSMQV*HRSVSY
Trigger: GTACGAGACAGAACGATGGCAGACCTGCATACTGCA...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTCTCGTTTTCCAAGCGTaGAGTATGCAGGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSLVFQA*SMQVCH
Trigger: ATGGCAGACCTGCATACTGCACGCTTGGAAAACGAG...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATTCGAGCAGGCTGGCTaGAGACAACATTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILFEQAG*RQHCLP
Trigger: TGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCAGCCACAGGCTGGGTTaGCATAGAACCGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGSHRLG*HRTELM
Trigger: CATTAACTCGGTTCTATGGCAACCCAGCCTGTGGCT...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCAGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTTGTTCTGCTTGCAGTTaGTCACATCTTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SGRLKFRAGWLQTTLSSSCSACS*SHLSFS
Trigger: TGAGAAAGAAAGATGTGACCAACTGCAAGCAGAACA...ACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGGGGACTCTGACAGGTaGCCTTTGTATTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFGDSDR*PLYFIW
Trigger: CCAGATGAAATACAAAGGCCACCTGTCAGAGTCCCC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATACCACTGTGTCACTTaGTACAAGCGTTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAEYHCVT*YKRFQT
Trigger: GGTTTGGAAACGCTTGTACCAAGTGACACAGTGGTA...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGTGTCCCACCTTGCCTaGGATAGTTCCAACTTACCA +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLVSHLA*DSSNLP
Trigger: TGGTAAGTTGGAACTATCCCAGGCAAGGTGGGACAC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTCCTGCTTTCCAGGAATaGGGAAGGAGTTCCCTAGCA +
Preference number: 4 (lower is better)
Translates to: PNRLSLFRELWPSTAEFIPAFQE*GRSSLA
Trigger: TGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGG...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGAAAGGATGTCATTGTaGATCCAGTGGAAAGACTCC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVERMSL*IQWKDS
Trigger: GGAGTCTTTCCACTGGATTCACAATGACATCCTTTC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433216.6
CDS-3UTR TCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTTACTCCATCCAACCTTaGATATACCAACCCAATCTT +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPYSIQP*IYQPNL
Trigger: AAGATTGGGTTGGTATATTCAAGGTTGGATGGAGTA...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGATGCTAGTACACAATTaGCTGTTGATCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVMLVHN*LLILPH
Trigger: ATGTGGAAGGATCAACAGTCAATTGTGTACTAGCAT...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTTCTTGCCGAGTTGCCTaGACCTGTTCCTCTGCTTTA +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFSCRVA*TCSSAL
Trigger: TAAAGCAGAGGAACAGGTTCAGGCAACTCGGCAAGA...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGCAGTAAAGGGTGCATaGAAGCATCCGCTCTATGGT +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFAVKGA*KHPLYG
Trigger: ACCATAGAGCGGATGCTTTCATGCACCCTTTACTGC...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGAGCAGGAAAGTTCTTTaGAGATTTTCCTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVSRKVL*RFSFSA
Trigger: GGCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCT...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCTCGTTTTCCAAGCGTaGAGTATGCAGGTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFLVFQA*SMQVCH
Trigger: ATGGCAGACCTGCATACTGCACGCTTGGAAAACGAG...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTTCTTTATAATGGTCTaGAGCCATCTGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCFFIMV*SHLKTE
Trigger: CTCCGTCTTCAGATGGCTGCAGACCATTATAAAGAA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTAAAAAGCACCATCTaGTCCATCTTCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVVKSTI*SIFHFP
Trigger: AGGAAAATGGAAGATGGAGCAGATGGTGCTTTTTAC...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCATTCTCATCTTCTTTaGTATCCTCAGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPHSHLL*YPQSPL
Trigger: TAGAGGACTCTGAGGATAGCAAAGAAGATGAGAATG...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATGGAAGAGAAGCCTTTTaGCTGCCCAGTTCCTTTCAA +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHGREAF*LPSSFQ
Trigger: TTGAAAGGAACTGGGCAGGCAAAAGGCTTCTCTTCC...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACAGCTACCCCACATTCTaGCGCTGGCGATTTATCCTT +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNSYPTF*RWRFIL
Trigger: AAGGATAAATCGCCAGCGGCAGAATGTGGGGTAGCT...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAGTGGTTCTCCATCCCTaGCGTCTTGCAAAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKVVLHP*RLAKKS
Trigger: TGACTTCTTTGCAAGACGGCAGGGATGGAGAACCAC...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAACACGGGGCTTGTAAATaGATTAGGACTTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAEHGACK*IRTCQH
Trigger: ATGTTGACAAGTCCTAATGCATTTACAAGCCCCGTG...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGTATTTTCTTACCATGTaGTACTCTAAGGCCTACCAT +
Preference number: 4 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVYFLTM*YSKAYH
Trigger: ATGGTAGGCCTTAGAGTAGCACATGGTAAGAAAATA...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSAVGSLQ*DFLKGC
Trigger: ACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAAC...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTGTTCTGCTTGCAGTTaGTCACATCTTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVCSACS*SHLSFS
Trigger: TGAGAAAGAAAGATGTGACCAACTGCAAGCAGAACA...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTTGTCAGCAATTTCTTTaGTCATTTCACAGACTTGCC +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPCQQFL*SFHRLA
Trigger: GGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGCCTTTGTATTTCATCTaGGTAAAAAGCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVPLYFI*VKSTIC
Trigger: GCAGATGGTGCTTTTTACCCAGATGAAATACAAAGG...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGCCTTTGTATTTCATCTaGGTAAAAAGCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQPLYFI*VKSTIC
Trigger: GCAGATGGTGCTTTTTACCCAGATGAAATACAAAGG...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTAAGTTTCGAGCAGGCTaGCTGCAGACAACATTGTCT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFKFRAG*LQTTLS
Trigger: AGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATAGTGTTCTGCTCATTTaGGAGTGTCAGGCACTAGCA +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHSVLLI*ECQALA
Trigger: TGCTAGTGCCTGACACTCCCAAATGAGCAGAACACT...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCGTAACCCCCGACCTTaGAGACTTCTGCATTTACTA +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGRNPRP*RLLHLL
Trigger: TAGTAAATGCAGAAGTCTCCAAGGTCGGGGGTTACG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAACCCACATTCTGCCGCTaGCGATTTATCCTTAGACCT +
Preference number: 4 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKPTFCR*RFILRP
Trigger: AGGTCTAAGGATAAATCGCCAGCGGCAGAATGTGGG...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATGTTCCTGGCGCAACTaGCTCTTCAAACAATCTTAT +
Preference number: 4 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVCSWRN*LFKQSY
Trigger: ATAAGATTGTTTGAAGAGCCAGTTGCGCCAGGAACA...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGTTATTTAGGGAGCTATaGCCAAGTACAGCAGAATTT +
Preference number: 4 (lower is better)
Translates to: FATSCFPGMGKEFPSKGVLFREL*PSTAEF
Trigger: AAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAA...CACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATAGGTGTGGAGACTGCTaGGGATTTGTTCATTCTGCA +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHRCGDC*GFVHSA
Trigger: TGCAGAATGAACAAATCCCCAGCAGTCTCCACACCT...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGTGCAATGGGACTTCTTaGAAGGATGTCATTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRCNGTS*KDVIVN
Trigger: ATTCACAATGACATCCTTTCAAGAAGTCCCATTGCA...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp CATCGTTCTGTCTCGTACGTTGACAGCATCACTGAGTTCTTTAGCCAGAAAGACCCACATTTTGAAAGATaGCATGGGCAAAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: HRSVSYVDSITEFFSQKDPHFER*HGQSWK
Trigger: CTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGG...GTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCCACATTTTGAAAGATaGCATGGGCAAAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVPHFER*HGQSWK
Trigger: CTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCA +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFISSSS*WALDVA
Trigger: TGCTACATCCAAAGCCCATCAGCTTGAGGAAGATAT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTAGTATCTTCTTTACTTaGGGTTGTAAGCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LVRKCSKGCMKASALWSPSIFFT*GCKQES
Trigger: ACTTTCCTGCTTACAACCTCAAGTAAAGAAGATACT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGGGTCTGTGTTTACTaGAGCATCATTCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVWVCVY*SIIHFL
Trigger: CAGAAAGTGAATGATGCTTCAGTAAACACAGACCCA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTAGGGGACACTTCTTGTaGACATCAAAGCTGGAATCA +
Preference number: 4 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSRGHFL*TSKLES
Trigger: TGATTCCAGCTTTGATGTTCACAAGAAGTGTCCCCT...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGAAAGGATGTCATTGTaGATCTGCTTTTGTTATCCG +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCERMSL*ICFCYP
Trigger: CGGATAACAAAAGCAGATTCACAATGACATCCTTTC...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR TCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATACTGGAGGATTAAATaGGATAATGCACAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAEYWRIK*DNAQSV
Trigger: CACACTCTGTGCATTATCTCATTTAATCCTCCAGTA...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTATGACATTCCAGGTGTaGATTAGGAAGGTAACTCTT +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCMTFQV*IRKVTL
Trigger: AAGAGTTACCTTCCTAATGCACACCTGGAATGTCAT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTCTGAACCTGTTCCTCTaGTTTACGAAGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFLNLFL*FTKLLL
Trigger: AAGGAGCAACTTCGTAAAGCAGAGGAACAGGTTCAG...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGACTGCATCAGCTAACTaGTTTTTCACTTTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: GCMKASALWSPQWSILGVTASAN*FFTFSF
Trigger: AAACGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGT...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGGTAAAAAGCACCATCTaGTCCATCTTCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRVKSTI*SIFHFP
Trigger: AGGAAAATGGAAGATGGAGCAGATGGTGCTTTTTAC...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTAAAAAGCACCATCTaGTCCATCTTCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCVKSTI*SIFHFP
Trigger: AGGAAAATGGAAGATGGAGCAGATGGTGCTTTTTAC...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTAAATGGGTCTGCACATaGCTTTCAAACACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFKWVCT*LSNTCW
Trigger: CCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTT...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTCTCCTGGTCAGAAAGTaGAGTAAAGGGTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFLLVRK*SKGCMK
Trigger: TTTCATGCACCCTTTACTGCACTTTCTGACCAGGAG...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVVGSLQ*DFLKGC
Trigger: ACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAAC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGAAGGCCTGCTTTTGTaGTCACCACTAACATGTCAG +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFEGLLL*SPLTCQ
Trigger: CTGACATGTTAGTGGTGACCACAAAAGCAGGCCTTC...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTCCTTTGTATTTCATCTaGGTAAAAAGCACCATCTGC +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCPLYFI*VKSTIC
Trigger: GCAGATGGTGCTTTTTACCCAGATGAAATACAAAGG...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTGTGAACATCAAAGCTaGAATCAAAGCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCCEHQS*NQSKSL
Trigger: CAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAAAAGCATCCGCTCTATaGTCTCCTCAGTGGTCTATT +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILKASAL*SPQWSI
Trigger: AATAGACCACTGAGGAGACCATAGAGCGGATGCTTT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGGTTGCCTTCCTATATTaGACATTCAGTTTGAATCGT +
Preference number: 4 (lower is better)
Translates to: VRKCSKGCMKASALWSPQVAFLY*TFSLNR
Trigger: ACGATTCAAACTGAATGTCCAATATAGGAAGGCAAC...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTACTCCATCCAACCTTaGATATACCAACCCAATCTT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVYSIQP*IYQPNL
Trigger: AAGATTGGGTTGGTATATTCAAGGTTGGATGGAGTA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp CATCGTTCTGTCTCGTACGTTGACAGCATCACTGAGTTCTTTAGCCAGAAAGACCATGTTGTGCCTTCTTaGGTTTGTCCTTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: HRSVSYVDSITEFFSQKDHVVPS*VCPLNC
Trigger: ACAGTTTAAAGGACAAACTCAAGAAGGCACAACATG...GTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCATGTTGTGCCTTCTTaGGTTTGTCCTTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVHVVPS*VCPLNC
Trigger: ACAGTTTAAAGGACAAACTCAAGAAGGCACAACATG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATGGGTCTGTGTTTACTaGAGCATCATTCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILWVCVY*SIIHFL
Trigger: CAGAAAGTGAATGATGCTTCAGTAAACACAGACCCA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTACATATAAAAGCATGTaGTCTCATTCTACATGCAGC +
Preference number: 4 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCTYKSM*SHSTCS
Trigger: GCTGCATGTAGAATGAGATCACATGCTTTTATATGT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCCTCAGTATTAAATGGTaGAGAGCCAGCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGLSIKW*RASNSK
Trigger: CTTTGAGTTGCTGGCTCTTCACCATTTAATACTGAG...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp GCGTTTCCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATACAGCAGAATTTATTaGAACCCACATTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AFPNRLSLFRELWPSTAEYSRIY*NPHLAP
Trigger: TGGAGCTAAATGTGGGTTTCAATAAATTCTGCTGTA...TTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGGAAACGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR TCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCTCGGGGCAGTGCTCGTaGTTTTTATTAATTGAAGTG +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLSGQCS*FLLIEV
Trigger: CACTTCAATTAATAAAAATCACGAGCACTGCCCCGA...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTAAGACCCTTTTGTTCTaGTTGCAGTTGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSKTLLF*LQLVTS
Trigger: AGATGTGACCAACTGCAAGCAGAACAAAAGGGTCTT...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAAAGACCCTTTTGTTCTaGTTGCAGTTGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILKTLLF*LQLVTS
Trigger: AGATGTGACCAACTGCAAGCAGAACAAAAGGGTCTT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTAAGACCCTTTTGTTCTaGTTGCAGTTGGTCACATCT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFKTLLF*LQLVTS
Trigger: AGATGTGACCAACTGCAAGCAGAACAAAAGGGTCTT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATTCTTTATAATGGTCTaGAGCCATCTGAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILFFIMV*SHLKTE
Trigger: CTCCGTCTTCAGATGGCTGCAGACCATTATAAAGAA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGTCATTTCACAGACTTaGCCCTTTGTTACTATGTCA +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVVISQT*PFVTMS
Trigger: TGACATAGTAACAAAGGGGCAAGTCTGTGAAATGAC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTAAGTGCAGTAAAGGGTaGATGAAAGCATCCGCTCTA +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFKCSKG*MKASAL
Trigger: TAGAGCGGATGCTTTCATGCACCCTTTACTGCACTT...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCTCCTGGTCAGAAAGTaGAGTAAAGGGTGCATGAAA +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFLLVRK*SKGCMK
Trigger: TTTCATGCACCCTTTACTGCACTTTCTGACCAGGAG...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATCCGCTGGAGGAGCTTTaGGAAATAGCATTTATAGTT +
Preference number: 4 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHPLEEL*EIAFIV
Trigger: AACTATAAATGCTATTTCGCAAAGCTCCTCCAGCGG...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGTCAGCAATTTCTTTaGTCATTTCACAGACTTGCC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVCQQFL*SFHRLA
Trigger: GGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAGGGGACTCTGACAGGTaGCCTTTGTATTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQGDSDR*PLYFIW
Trigger: CCAGATGAAATACAAAGGCCACCTGTCAGAGTCCCC...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGTGAACATCAAAGCTaGAATCAAAGCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVCEHQS*NQSKSL
Trigger: CAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
3UTR CAA 72 bp CAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTaGTTACTATGTCAAAATCTGCCTCTGCTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QQFLWSFHRLAP*LLCQNLPLLQK
Trigger: CTTCTGCAGCAGAGGCAGATTTTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTATGCTAGTACACAATTaGCTGTTGATCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFMLVHN*LLILPH
Trigger: ATGTGGAAGGATCAACAGTCAATTGTGTACTAGCAT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTACATATAAAAGCATGTaGTCTCATTCTACATGCAGC +
Preference number: 4 (lower is better)
Translates to: CMKASALWSPQWSILGVVTYKSM*SHSTCS
Trigger: GCTGCATGTAGAATGAGATCACATGCTTTTATATGT...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGTCATTTCACAGACTTaGCCCTTTGTTACTATGTCA +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFVISQT*PFVTMS
Trigger: TGACATAGTAACAAAGGGGCAAGTCTGTGAAATGAC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGTAAAAAGCACCATCTaGTCCATCTTCCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFVKSTI*SIFHFP
Trigger: AGGAAAATGGAAGATGGAGCAGATGGTGCTTTTTAC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTCATTCTCATCTTCTTTaGTATCCTCAGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFHSHLL*YPQSPL
Trigger: TAGAGGACTCTGAGGATAGCAAAGAAGATGAGAATG...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATGTTCTGCTTGCAGTTaGTCACATCTTTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILCSACS*SHLSFS
Trigger: TGAGAAAGAAAGATGTGACCAACTGCAAGCAGAACA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGTCAGCAATTTCTTTaGTCATTTCACAGACTTGCC +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFCQQFL*SFHRLA
Trigger: GGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATGTGAACATCAAAGCTaGAATCAAAGCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILCEHQS*NQSKSL
Trigger: CAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR TCA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAATATCTTCCTCAAGCTaGTGGGCTTTGGATGTAGCA +
Preference number: 4 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQISSSS*WALDVA
Trigger: TGCTACATCCAAAGCCCATCAGCTTGAGGAAGATAT...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCATGTTGTGCCTTCTTaGGTTTGTCCTTTAAACTGT +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFHVVPS*VCPLNC
Trigger: ACAGTTTAAAGGACAAACTCAAGAAGGCACAACATG...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAAGTATCTTCTTTACTTaGGGTTGTAAGCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILSIFFT*GCKQES
Trigger: ACTTTCCTGCTTACAACCTCAAGTAAAGAAGATACT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR TCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTATTGGACATTCAGTTTaGATCGTAACTCCACAGAAG +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFIGHSV*IVTPQK
Trigger: CTTCTGTGGAGTTACGATTCAAACTGAATGTCCAAT...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTATGACATTCCAGGTGTaGATTAGGAAGGTAACTCTT +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFMTFQV*IRKVTL
Trigger: AAGAGTTACCTTCCTAATGCACACCTGGAATGTCAT...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTACTGCATCAGCTAACTaGTTTTTCACTTTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSTASAN*FFTFSF
Trigger: AAACGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGT...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAACTGCATCAGCTAACTaGTTTTTCACTTTCTCGTTT +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILTASAN*FFTFSF
Trigger: AAACGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR GCA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTTCGAGCAGGCTGGCTaGAGACAACATTGTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFFEQAG*RQHCLP
Trigger: TGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAA...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR GCA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCATTCTCATCTTCTTTaGTATCCTCAGAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: MKASALWSPQWSILGVVFHSHLL*YPQSPL
Trigger: TAGAGGACTCTGAGGATAGCAAAGAAGATGAGAATG...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR GCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACCAAGGAAGAGACTTGTaGCTGTTTCATGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNQGRDL*LFHERE
Trigger: TTCTCTTTCATGAAACAGGCACAAGTCTCTTCCTTG...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACTCTTTAAATTCAACCTaGAAGGAAGAGACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNSLNST*KEETCA
Trigger: GGCACAAGTCTCTTCCTTGCAGGTTGAATTTAAAGA...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTAAGGACGCCAGCATGTaGCATTTGTTTAAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: PNRLSLFRELWPSTAEFIKDASM*HLFKSK
Trigger: TTTACTCTTAAACAAATGCCACATGCTGGCGTCCTT...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACAAAATAAAAGCCAAGTaGCTTGTCCTTCACCTAACG +
Preference number: 4 (lower is better)
Translates to: ENKSQVACPSPNESKGMNKIKAK*LVLHLT
Trigger: CGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTT...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGCTTGTTGTATATGTTaGCTTCCTATATTGGACATT +
Preference number: 4 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFACCIC*LPILDI
Trigger: AATGTCCAATATAGGAAGGCAACATATACAACAAGC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CCA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTATTCTCCATCATCATTTaGAAGGTAATATCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SKGCMKASALWSPQWSILFSIII*KVISLE
Trigger: TTCCAAGGATATTACCTTCCAAATGATGATGGAGAA...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CCA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGTGTGAACATCAAAGCTaGAATCAAAGCAAAAGCCTG +
Preference number: 4 (lower is better)
Translates to: AFSLSSATASANCFFTFSCEHQS*NQSKSL
Trigger: CAGGCTTTTGCTTTGATTCCAGCTTTGATGTTCACA...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCAAAGCTCCAAATAAATaGCTTTGGGCCTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: FQCILYGGPPIPGILYTLKAPNK*LWASLK
Trigger: TTTTAATGAGGCCCAAAGCCATTTATTTGGAGCTTT...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCTGGAATTATTTTGTTTaGTTTCACAACAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGWNYFV*FHNRPF
Trigger: GAAAGGCCTGTTGTGAAACCAAACAAAATAATTCCA...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CCA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCATGAATGAACGAGCTTaGGATTTATTTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGMNERA*DLFSSC
Trigger: ACAAGAGGAAAATAAATCCCAAGCTCGTTCATTCAT...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR GCA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAGTCATTTCACAGACTTaGCCCTTTGTTACTATGTCA +
Preference number: 4 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQVISQT*PFVTMS
Trigger: TGACATAGTAACAAAGGGGCAAGTCTGTGAAATGAC...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAAGTATCTTCTTTACTTaGGGTTGTAAGCAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQSIFFT*GCKQES
Trigger: ACTTTCCTGCTTACAACCTCAAGTAAAGAAGATACT...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTGGGTCTGTGTTTACTaGAGCATCATTCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFWVCVY*SIIHFL
Trigger: CAGAAAGTGAATGATGCTTCAGTAAACACAGACCCA...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR TCA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTATGCTAGTACACAATTaGCTGTTGATCCTTCCACAT +
Preference number: 4 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFMLVHN*LLILPH
Trigger: ATGTGGAAGGATCAACAGTCAATTGTGTACTAGCAT...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CCA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTGTCAGCAATTTCTTTaGTCATTTCACAGACTTGCC +
Preference number: 4 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFCQQFL*SFHRLA
Trigger: GGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
3UTR CAA 72 bp TCAAGTTGTTCTCTTTCATGTTGTGCCTTCTTGAGTTaGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSCSLSCCAFLS*SFKLSNSVSFS
Trigger: TGAAAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGAAAGAGAACAACTTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS GCA 90 bp CCCTGGTGCCGGGAGTGCCCTCTCCCTGGGCCGTCAGCGCTGCTCTaGCACGGCCACATCTCCTGTCCTGGAAGTGGCCGGGTGAACCTG +
Preference number: 5 (lower is better)
Translates to: PWCRECPLPGPSALL*HGHISCPGSGRVNL
Trigger: CAGGTTCACCCGGCCACTTCCAGGACAGGAGATGTGGCCGTGGCAGAGCAGCGCTGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGGGCCTCTGTAGCCTCTaGGAGGTGGGGGCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GHPTPCQGREWVPASERLGLCSL*EVGAGV
Trigger: CACTCCAGCCCCCACCTCCAAGAGGCTACAGAGGCC...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp AATAGCCGTGTTTGCAGTCCCCTGGTGCCGGGAGTGCCCTCTCCCTaGGCCGTCAGCGCTGCTCTGCCACGGCCACATCTCCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: NSRVCSPLVPGVPSP*AVSAALPRPHLLSW
Trigger: CCAGGACAGGAGATGTGGCCGTGGCAGAGCAGCGCTGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAACACGGCTATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp GGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGGAGTaGCCTCTCCCTGGGCCGTCAGCGCTGCTCTGCCACGGCCACATC +
Preference number: 5 (lower is better)
Translates to: GCKGIAVFAVPWCRE*PLPGPSALLCHGHI
Trigger: GATGTGGCCGTGGCAGAGCAGCGCTGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp TGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTaGCGGGAGTGCCCTCTCCCTGGGCCGTCAGCGCTGCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: CFQGCKGIAVFAVPW*RECPLPGPSALLCH
Trigger: GTGGCAGAGCAGCGCTGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGGTTTCACCCAAGGACTaGGTGGTAAGCTGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: GHPTPCQGREWVPASERLVSPKD*VVSCCR
Trigger: TCGGCAGCAGCTTACCACCAAGTCCTTGGGTGAAAC...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 90 bp CGCTGCTCTGCCACGGCCACATCTCCTGTCCTGGAAGTGGCCGGGTaGACCTGTGGGGAGATGAGCGCTCCTGACAGTCCTTGCACTTCT +
Preference number: 5 (lower is better)
Translates to: RCSATATSPVLEVAG*TCGEMSAPDSPCTS
Trigger: AGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAGGACAGGAGATGTGGCCGTGGCAGAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 90 bp CCACATCTCCTGTCCTGGAAGTGGCCGGGTGAACCTGTGGGGAGATaGGCGCTCCTGACAGTCCTTGCACTTCTCTTGTCCTGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: PHLLSWKWPGEPVGR*ALLTVLALLLSCRQ
Trigger: CTGCCTGCAGGACAAGAGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAGGACAGGAGATGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp GACGAGGAGGAGGTGGACTATGAGGAGTCGGACAGCGATGAGTCCTaGACCACAGAGAGTGCCATCAGCTCCGAAGCCATCCTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: DEEEVDYEESDSDES*TTESAISSEAILSS
Trigger: GGAGCTGAGGATGGCTTCGGAGCTGATGGCACTCTCTGTGGTCCAGGACTCATCGCTGTCCGACTCCTCATAGTCCACCTCCTCCTCGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGCATGGGCCAGGCATTTaGTCCAGAGTCCTAAAAACA +
Preference number: 5 (lower is better)
Translates to: GHPTPCQGREWVPASERLHGPGI*SRVLKT
Trigger: TGTTTTTAGGACTCTGGACAAAATGCCTGGCCCATG...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 90 bp AAAGACTCCCGGATCAAGGGAGAAAGTTACGCAGGCTTCCGATCCTaGTCCGCCATCAGCCGCCGAACCTCTTCCGCCACTACCGCCTAC +
Preference number: 5 (lower is better)
Translates to: KDSRIKGESYAGFRS*SAISRRTSSATTAY
Trigger: GTAGGCGGTAGTGGCGGAAGAGGTTCGGCGGCTGATGGCGGATCAGGATCGGAAGCCTGCGTAACTTTCTCCCTTGATCCGGGAGTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000416801.6
ENST00000433216.6
ENST00000490455.1
CDS TCA 90 bp CCAGAGAAGCAAGGGAGTGACCACACGGCTAGGGCTGCAAACCCCTaGGCACCAAGACTGTCTCTGAACTCCTGGCCCAGTCGTGTGCTT +
Preference number: 5 (lower is better)
Translates to: PEKQGSDHTARAANP*APRLSLNSWPSRVL
Trigger: AAGCACACGACTGGGCCAGGAGTTCAGAGACAGTCTTGGTGCTCAGGGGTTTGCAGCCCTAGCCGTGTGGTCACTCCCTTGCTTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS TCA 90 bp TGTCCTGGAAGTGGCCGGGTGAACCTGTGGGGAGATGAGCGCTCCTaGCAGTCCTTGCACTTCTCTTGTCCTGCAGGCAGCGAGTATGAC +
Preference number: 5 (lower is better)
Translates to: CPGSGRVNLWGDERS*QSLHFSCPAGSEYD
Trigger: GTCATACTCGCTGCCTGCAGGACAAGAGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACACCCCACGCCCTGTCAGGGACGCGAATGGGTGCCAGCATCTGAGCGCCTGAACAGATTTCAAGATTaGCTCCAGGACAGACCCCAA +
Preference number: 5 (lower is better)
Translates to: GHPTPCQGREWVPASERLNRFQD*LQDRPQ
Trigger: TTGGGGTCTGTCCTGGAGCAAATCTTGAAATCTGTT...CAGGCGCTCAGATGCTGGCACCCATTCGCGTCCCTGACAGGGCGTGGGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp TGCACTTCTCTTGTCCTGCAGGCAGCGAGTATGACGAGGAGGAGGTaGACTATGAGGAGTCGGACAGCGATGAGTCCTGGACCACAGAGA +
Preference number: 5 (lower is better)
Translates to: CTSLVLQAASMTRRR*TMRSRTAMSPGPQR
Trigger: TCTCTGTGGTCCAGGACTCATCGCTGTCCGACTCCTCATAGTCCACCTCCTCCTCGTCATACTCGCTGCCTGCAGGACAAGAGAAGTGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGGAGGGTGTTGCTAGGAGAAGCAGCTTTGCTACCTCCTGCTTTCCAGGAATGGGGCCTTCTATGCCTCTaGCTCCCTAGCGTGAGGGTA +
Preference number: 5 (lower is better)
Translates to: GRVLLGEAALLPPAFQEWGLLCL*LPSVRV
Trigger: TACCCTCACGCTAGGGAGCAAGAGGCATAGAAGGCC...CCATTCCTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAGCAACACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp CATTCAAGTGTCGCTGTGGGAAGAGTTACAAGACAGCTCAGGGCCTaGGGCACCACACAATCAATTTCCATCCCCCGGTGTCGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: HSSVAVGRVTRQLRA*GTTQSISIPRCRLR
Trigger: TCTCAGCCGACACCGGGGGATGGAAATTGATTGTGTGGTGCCGCAGGCCCTGAGCTGTCTTGTAACTCTTCCCACAGCGACACTTGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS-3UTR CAA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCAGAAGTGTTCCAACTaGCAGGGTAAGCTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRQKCSN*QGKLCV
Trigger: GACACACAGCTTACCCTGCAAGTTGGAACACTTCTG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGCAGTGTTCTGCTCATTaGGGAGTGTCAGGCACTAGC +
Preference number: 5 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKQCSAH*GVSGTS
Trigger: GCTAGTGCCTGACACTCCCAAATGAGCAGAACACTG...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp TGGCTCCTTTCAACTTTGAGCCTCAGATGCCGGCGTCCCTGTTCCTGGCGCAACGTACCACTGTGTCACTaGGTACAAGCGTTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: WLLSTLSLRCRRPCSWRNVPLCH*VQAFPN
Trigger: GTTTGGAAACGCTTGTACCAAGTGACACAGTGGTAC...GTTGCGCCAGGAACAGGGACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp GAGTGCCATCAGCTCCGAAGCCATCCTCAGCTCCATGTGCATGAATaGAGGGGAAGAGAAGCCTTTTGCCTGCCCAGTTCCTTTCAAACA +
Preference number: 5 (lower is better)
Translates to: ECHQLRSHPQLHVHE*RGREAFCLPSSFQT
Trigger: TGTTTGAAAGGAACTGGGCAGGCAAAAGGCTTCTCTTCCCCTCCATTCATGCACATGGAGCTGAGGATGGCTTCGGAGCTGATGGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp AGGCCGACTAAAGTTTCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCTGGCTGCAGACAACATaGTCTTCCAGTCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RPTKVSSRLAADNIVFQSWLQTT*SSSPQE
Trigger: CTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCA...GGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGAAACTTTAGTCGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GCTTTGCTACCTCCTGCTTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGAAGCTTGGGAGGGTGTaGCTAGGAGAAGCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: ALLPPAFQEWGRSSLAKVKLGRV*LGEAAL
Trigger: CAAAGCTGCTTCTCCTAGCAACACCCTCCCAAGCTT...CACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAAGCAGGAGGTAGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp TGTCATTGTGAATCAGCGATGTGGAAAGGGCAGCTCAGAGGTCCATaGACAGTACCGTATCCCTGTCTGCGTCTCAGTCGGCCTAAACTA +
Preference number: 5 (lower is better)
Translates to: CHCESAMWKGQLRGP*TVPYPCLRLSRPKL
Trigger: TAGTTTAGGCCGACTGAGACGCAGACAGGGATACGGTACTGTCCATGGACCTCTGAGCTGCCCTTTCCACATCGCTGATTCACAATGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS CCA 90 bp TCACAGAACACAGATTCGTGTCCGCAAACCATTCAAGTGTCGCTGTaGGAAGAGTTACAAGACAGCTCAGGGCCTGCGGCACCACACAAT +
Preference number: 5 (lower is better)
Translates to: SQNTDSCPQTIQVSL*EELQDSSGPAAPHN
Trigger: ATTGTGTGGTGCCGCAGGCCCTGAGCTGTCTTGTAACTCTTCCCACAGCGACACTTGAATGGTTTGCGGACACGAATCTGTGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS-3UTR CAA 90 bp TCGAGCAGGCTGGCTGCAGACAACATTGTCTTCCAGTCCCCAAGAGGGGACTCTGTACTCCATCCAACCTaGAATATACCAACCCAATCT +
Preference number: 5 (lower is better)
Translates to: SSRLAADNIVFQSPRGDSVLHPT*NIPTQS
Trigger: AGATTGGGTTGGTATATTCAAGGTTGGATGGAGTAC...AGAGTCCCCTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCAGCCTGCTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTGGCTGCAGACAACATaGTCTTCCAGTCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: GCMKASALWSPQWSILGVWLQTT*SSSPQE
Trigger: CTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCA...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAGTCCTTGCACTTCTCTaGTCCTGCAGGCAGCGAGTA +
Preference number: 5 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVVLALL*SCRQRV
Trigger: TACTCGCTGCCTGCAGGACAAGAGAAGTGCAAGGAC...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAATTGTTGGGAAGCCCTaGCCCTGGTCTCTTAGGTGG +
Preference number: 5 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVIVGKP*PWSLRW
Trigger: CCACCTAAGAGACCAGGGCAAGGGCTTCCCAACAAT...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGTCTTCCCTGTGCCTTaGCAGCCACAGGCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: FQCILYGGPPIPGILYTLVFPVP*QPQAGL
Trigger: CAACCCAGCCTGTGGCTGCAAAGGCACAGGGAAGAC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGACAGACCCCAAGCAACGTGGCCAAGTGGTACCACTGTGTCACTTGGTACAAGAGGAGCCTGTCATCGTaGCTTATTTTTGGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: GQTPSNVAKWYHCVTWYKRSLSS*LIFGFG
Trigger: GCCAAAACCAAAAATAAGCAACGATGACAGGCTCCT...CTTGTACCAAGTGACACAGTGGTACCACTTGGCCACGTTGCTTGGGGTCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp GACCGACACACCAGAATGTCCTTGAAGGGTCCCAACTGGAGTCCTTaGAAAAGACTACACTCTAAACAGCTGCCATCCAGGAACTGCAAT +
Preference number: 5 (lower is better)
Translates to: DRHTRMSLKGPNWSP*KRLHSKQLPSRNCN
Trigger: ATTGCAGTTCCTGGATGGCAGCTGTTTAGAGTGTAGTCTTTTGCAAGGACTCCAGTTGGGACCCTTCAAGGACATTCTGGTGTGTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS GCA 90 bp TCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTaGACATCGGGCACACCTTCCAGTGACTTTCAACATGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: SFQTPAGHSQEGTAR*TSGTPSSDFQHVLQ
Trigger: TTGAAGAACATGTTGAAAGTCACTGGAAGGTGTGCCCGATGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACATTCCATTCTCCCAACTaGTTCTCGAAGTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTFHSPN*FSKLCC
Trigger: ACAGCACAACTTCGAGAACAAGTTGGGAGAATGGAA...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGCAGAAAGACAACTTCTaGCCGAGTTGCCTGAACCTG +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQQKDNF*PSCLNL
Trigger: CAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTCTG...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTGGCTGCAGACAACATaGTCTTCCAGTCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCWLQTT*SSSPQE
Trigger: CTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATCTGCAAGGAAGAGACTaGTGCCTGTTTCATGAAAGA +
Preference number: 5 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDLQGRD*CLFHER
Trigger: TCTTTCATGAAACAGGCACAAGTCTCTTCCTTGCAG...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp TCCTGCTTCCAGGGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTGCCGGCCTTTTGGAATTATTTaGTTTGGTTTCACAACAGGC +
Preference number: 5 (lower is better)
Translates to: SCFQGCKGIAVFAVPWCRPFGII*FGFTTG
Trigger: GCCTGTTGTGAAACCAAACAAAATAATTCCAAAAGG...CCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACCCTGGAAGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTATGACATGGGCAAAGTaGGAAGTCTGCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPMTWAK*EVCNGT
Trigger: AGTCCCATTGCAGACTTCCAACTTTGCCCATGTCAT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCAACTTCTTGCCGAGTaGCCTGAACCTGTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVQLLAE*PEPVPL
Trigger: CAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACACACAGACTTGCCCCTTaGTTACTATGTCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: HAFQTPAGHSQEGTARCTHRLAP*LLCQNL
Trigger: CAGATTTTGACATAGTAACAAAGGGGCAAGTCTGTG...TGTGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTGGCTGCAGACAACATaGTCTTCCAGTCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVWLQTT*SSSPQE
Trigger: CTCTTGGGGACTGGAAGACAATGTTGTCTGCAGCCA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp TCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCATTGGCTCCTTTCAACTTaGAGCCTCAGATGCCGGCGT +
Preference number: 5 (lower is better)
Translates to: SVHTLWRSSYPRYSIHTHWLLST*SLRCRR
Trigger: ACGCCGGCATCTGAGGCTCAAAGTTGAAAGGAGCCA...ATGAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTTCCATTCTCCCAACTaGTTCTCGAAGTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GCMKASALWSPQWSILGVFHSPN*FSKLCC
Trigger: ACAGCACAACTTCGAGAACAAGTTGGGAGAATGGAA...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTACCCTTTTGTTCTGCTaGCAGTTGGTCACATCTTTC +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPTLLFC*QLVTSF
Trigger: GAAAGATGTGACCAACTGCAAGCAGAACAAAAGGGT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTTTCAGTAAGACCCTTTaGTTCTGCTTGCAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPFSKTL*FCLQLV
Trigger: GACCAACTGCAAGCAGAACAAAAGGGTCTTACTGAA...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAGGGAACTGCTCGCTGCACAACTGACATTCAAGTaGTTCTCTTTCATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: HMPFKHLLVIVRRELLAAQLTFK*FSFMLC
Trigger: GCACAACATGAAAGAGAACAACTTGAATGTCAGTTG...TGCAGCGAGCAGTTCCCTCCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTCAACTTCTTGCCGAGTaGCCTGAACCTGTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSQLLAE*PEPVPL
Trigger: CAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTG...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTACAACTTCTTGCCGAGTaGCCTGAACCTGTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILQLLAE*PEPVPL
Trigger: CAGAGGAACAGGTTCAGGCAACTCGGCAAGAAGTTG...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGGTCATTTCACAGACTaGCCCCTTTGTTACTATGTC +
Preference number: 5 (lower is better)
Translates to: GCMKASALWSPQWSILGVGHFTD*PLCYYV
Trigger: GACATAGTAACAAAGGGGCAAGTCTGTGAAATGACC...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGGGTCATTTCACAGACTaGCCCCTTTGTTACTATGTC +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQGHFTD*PLCYYV
Trigger: GACATAGTAACAAAGGGGCAAGTCTGTGAAATGACC...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTACCCGCTGGAGGAGCTTaGCGAAATAGCATTTATAGT +
Preference number: 5 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVPAGGA*RNSIYS
Trigger: ACTATAAATGCTATTTCGCAAAGCTCCTCCAGCGGG...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp ACTGCCTTCCATGTTTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTAAAACAAAAGTCCATCTaGTCGCAACCGAGGGAGATG +
Preference number: 5 (lower is better)
Translates to: TAFHVFSAYSMEVLLSQVKQKSI*SQPREM
Trigger: CATCTCCCTCGGTTGCGACAAGATGGACTTTTGTTT...TACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAAACATGGAAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp CAATCAATTTCCATCCCCCGGTGTCGGCTGAGATTATCAGGAAGATaGAGCAATAACATGCTGGTCATAACTGTGCCAAGAAATCCTCAC +
Preference number: 5 (lower is better)
Translates to: QSISIPRCRLRLSGR*SNNMLVITVPRNPH
Trigger: GTGAGGATTTCTTGGCACAGTTATGACCAGCATGTTATTGCTGCATCTTCCTGATAATCTCAGCCGACACCGGGGGATGGAAATTGATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS-3UTR CAA 90 bp CATCGTTCTGTCTCGTACGTTGACAGCATCACTGAGTTCTTTAGCCAGAAAGACATGACATGGGCAAAGTaGGAAGTCTGCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: HRSVSYVDSITEFFSQKDMTWAK*EVCNGT
Trigger: AGTCCCATTGCAGACTTCCAACTTTGCCCATGTCAT...GTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp CTATCCTCAGAGTCCTCTAAGCCATCAGGCCGACTAAAGTTTCGAGCAGGCTGGTACCAACCCAATCTTTaGGATGTGGATGAATATATG +
Preference number: 5 (lower is better)
Translates to: LSSESSKPSGRLKFRAGWYQPNL*DVDEYM
Trigger: CATATATTCATCCACATCCAAAAGATTGGGTTGGTA...CCAGCCTGCTCGAAACTTTAGTCGGCCTGATGGCTTAGAGGACTCTGAGGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGGTACTCCATCCAACCTaGAATATACCAACCCAATCT +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQVLHPT*NIPTQS
Trigger: AGATTGGGTTGGTATATTCAAGGTTGGATGGAGTAC...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGCACAGACTTGCCCCTTaGTTACTATGTCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQHRLAP*LLCQNL
Trigger: CAGATTTTGACATAGTAACAAAGGGGCAAGTCTGTG...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGGGTCATTTCACAGACTaGCCCCTTTGTTACTATGTC +
Preference number: 5 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRGHFTD*PLCYYV
Trigger: GACATAGTAACAAAGGGGCAAGTCTGTGAAATGACC...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTCTGACAGGTGGCCTTaGTATTTCATCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: GCMKASALWSPQWSILGVSDRWP*YFIWVK
Trigger: TTTTACCCAGATGAAATACAAAGGCCACCTGTCAGA...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTCTGACAGGTGGCCTTaGTATTTCATCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQSDRWP*YFIWVK
Trigger: TTTTACCCAGATGAAATACAAAGGCCACCTGTCAGA...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTACATTCTCATCTTCTTaGCTATCCTCAGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPTFSSS*LSSESS
Trigger: AGAGGACTCTGAGGATAGCAAAGAAGATGAGAATGT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACGGGAAGAGAAGCCTTTaGCCTGCCCAGTTCCTTTCA +
Preference number: 5 (lower is better)
Translates to: ENKSQVACPSPNESKGMNGKRSL*PAQFLS
Trigger: TGAAAGGAACTGGGCAGGCAAAAGGCTTCTCTTCCC...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp TTTCAGTGCATACTCTATGGAGGTCCTCCTATCCCAGGTATTCTATACACACTCGAACCCAGGTCTGTGTaGATGTTCTCTGTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: FQCILYGGPPIPGILYTLEPRSV*MFSVRG
Trigger: TCCTCTGACAGAGAACATCAACACAGACCTGGGTTC...GAGTGTGTATAGAATACCTGGGATAGGAGGACCTCCATAGAGTATGCACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp TTTCCAGGAATGGGGAAGGAGTTCCCTAGCAAAGGTGTGGAGACTGCTGGGGATGGATTCCCAACCCTTTaGGAATTATTTTGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: FPGMGKEFPSKGVETAGDGFPTL*ELFCLV
Trigger: AACCAAACAAAATAATTCCAAAAGGGTTGGGAATCC...ATCCCCAGCAGTCTCCACACCTTTGCTAGGGAACTCCTTCCCCATTCCTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp CCAAACCGGCTCTCTTTATTTAGGGAGCTATGGCCAAGTACAGCAGAATTTATTCTAGGAGAAGCAGCTTaGCTACCTCCTGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: PNRLSLFRELWPSTAEFILGEAA*LPPAFQ
Trigger: CTGGAAAGCAGGAGGTAGCAAAGCTGCTTCTCCTAG...AATAAATTCTGCTGTACTTGGCCATAGCTCCCTAAATAAAGAGAGCCGGTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAATGACATGGGCAAAGTaGGAAGTCTGCAATGGGACT +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILMTWAK*EVCNGT
Trigger: AGTCCCATTGCAGACTTCCAACTTTGCCCATGTCAT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTAATGCTAGTACACAATaGACTGTTGATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPNASTQ*TVDPST
Trigger: TGTGGAAGGATCAACAGTCAATTGTGTACTAGCATT...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTACTGGAAAGGTGTACTaGCTCCACGAATTTCACCCT +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFTGKVY*LHEFHP
Trigger: AGGGTGAAATTCGTGGAGCAAGTACACCTTTCCAGT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTACAAGAAGGCCTGCTTTaGTGGTCACCACTAACATGT +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILQEGLL*WSPLTC
Trigger: ACATGTTAGTGGTGACCACAAAAGCAGGCCTTCTTG...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTCCATTCTCCCAACTaGTTCTCGAAGTTGTGCTGT +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVFHSPN*FSKLCC
Trigger: ACAGCACAACTTCGAGAACAAGTTGGGAGAATGGAA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTCAGTAAGACCCTTTaGTTCTGCTTGCAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVFSKTL*FCLQLV
Trigger: GACCAACTGCAAGCAGAACAAAAGGGTCTTACTGAA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGTTGTTCTCTTTCATGTaGTGCCTTCTTGAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: GCMKASALWSPQWSILGVLFSFM*CLLEFV
Trigger: GACAAACTCAAGAAGGCACAACATGAAAGAGAACAA...CACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTTGTTCTCTTTCATGTaGTGCCTTCTTGAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQLFSFM*CLLEFV
Trigger: GACAAACTCAAGAAGGCACAACATGAAAGAGAACAA...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAACTGACATTCAAGTaGTTCTCTTTCATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPQLTFK*FSFMLC
Trigger: GCACAACATGAAAGAGAACAACTTGAATGTCAGTTG...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp TCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCATCGTTCTGTCTCAAGCAGGAAAGTTCTTaGCAGATTTTCCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SLSRFPSVQYAGLPSFCLKQESS*QIFLFS
Trigger: GCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCTT...GAGACAGAACGATGGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGTTCTGTCTCGTACGTaGACAGCATCACTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFVLSRT*TASLSS
Trigger: AGAACTCAGTGATGCTGTCAACGTACGAGACAGAAC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGGTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTTTGTCAGCAATTTCTTaGGTCATTTCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: LVRKCSKGCMKASALWSPLSAIS*VISQTC
Trigger: GCAAGTCTGTGAAATGACCAAAGAAATTGCTGACAA...AGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTTCTGACAGGTGGCCTTaGTATTTCATCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCSDRWP*YFIWVK
Trigger: TTTTACCCAGATGAAATACAAAGGCCACCTGTCAGA...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp GAAAATAAAAGCCAAGTGGCTTGTCCTTCACCTAACGAAAGCAAAGGCATGAACACCGAGTTAATGTTCTaGCTCCGCCAACTCCTAGCT +
Preference number: 5 (lower is better)
Translates to: ENKSQVACPSPNESKGMNTELMF*LRQLLA
Trigger: AGCTAGGAGTTGGCGGAGCAAGAACATTAACTCGGT...GTTCATGCCTTTGCTTTCGTTAGGTGAAGGACAAGCCACTTGGCTTTTATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp CAGCTCTTCAACTGGAGAAGAAGCTCGAAACTGGAAAGGTGTACTTaGTCCACGAATTTCACCCTTATGGGTAACGTAACAGAACTGATA +
Preference number: 5 (lower is better)
Translates to: QLFNWRRSSKLERCT*STNFTLMGNVTELI
Trigger: TATCAGTTCTGTTACGTTACCCATAAGGGTGAAATTCGTGGAGCAAGTACACCTTTCCAGTTTCGAGCTTCTTCTCCAGTTGAAGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000418691.5
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTGTACTCCATCCAACCTaGAATATACCAACCCAATCT +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVVLHPT*NIPTQS
Trigger: AGATTGGGTTGGTATATTCAAGGTTGGATGGAGTAC...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp CTGATCAAAATGGGTCTGCACATGCCTTTCAAACACCTGCTGGTCATAGTCAGGAATGCTAGTACACAATaGACTGTTGATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: LIKMGLHMPFKHLLVIVRNASTQ*TVDPST
Trigger: TGTGGAAGGATCAACAGTCAATTGTGTACTAGCATT...CCTGACTATGACCAGCAGGTGTTTGAAAGGCATGTGCAGACCCATTTTGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAACCCTTTTGTTCTGCTaGCAGTTGGTCACATCTTTC +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILTLLFC*QLVTSF
Trigger: GAAAGATGTGACCAACTGCAAGCAGAACAAAAGGGT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTGCCTTGTTCTCTTTCATGTaGTGCCTTCTTGAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: ANCFFTFSFSKRAVCRSALFSFM*CLLEFV
Trigger: GACAAACTCAAGAAGGCACAACATGAAAGAGAACAA...GGCAGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTAAGCAGGAAAGTTCTTaGCAGATTTTCCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCKQESS*QIFLFS
Trigger: GCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCTT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGCAGAAAGACAACTTCTaGCCGAGTTGCCTGAACCTG +
Preference number: 5 (lower is better)
Translates to: AFSLSSATASANCFFTFSQKDNF*PSCLNL
Trigger: CAGGTTCAGGCAACTCGGCAAGAAGTTGTCTTTCTG...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTGGTCATTTCACAGACTaGCCCCTTTGTTACTATGTC +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFGHFTD*PLCYYV
Trigger: GACATAGTAACAAAGGGGCAAGTCTGTGAAATGACC...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp CATCGTTCTGTCTCGTACGTTGACAGCATCACTGAGTTCTTTAGCCAGAAAGACACATTCTCATCTTCTTaGCTATCCTCAGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: HRSVSYVDSITEFFSQKDTFSSS*LSSESS
Trigger: AGAGGACTCTGAGGATAGCAAAGAAGATGAGAATGT...GTCTTTCTGGCTAAAGAACTCAGTGATGCTGTCAACGTACGAGACAGAACGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp GTCAGAAAGTGCAGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGGTCTTTCTCTGCCAATaGAAGTTTATAATTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VRKCSKGCMKASALWSPQVFLCQ*KFIIVL
Trigger: CAGGACAATTATAAACTTCAATTGGCAGAGAAAGAC...CTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACTGCACTTTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457186.2
CDS-3UTR CAA 90 bp GTCCTAAAAACAGGAACTCAGTTATTCTTCACAACAGCCTTAGTGCACACAGGCTGCTTATTTTTGGTTTaGGCCCCAGAGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: VLKTGTQLFFTTALVHTGCLFLV*APEQVF
Trigger: GAAGACTTGCTCTGGGGCCAAAACCAAAAATAAGCA...GCCTGTGTGCACTAAGGCTGTTGTGAAGAATAACTGAGTTCCTGTTTTTAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 90 bp CCAAGAAATGTCACAGATTTTATAAGCCATCCAACCAGACCAGTTTaGAAGTCTGGAGTTGTAGCTGCCCAGCAGGCATGCTTGATTAAA +
Preference number: 5 (lower is better)
Translates to: PRNVTDFISHPTRPV*KSGVVAAQQACLIK
Trigger: TTTAATCAAGCATGCCTGCTGGGCAGCTACAACTCCAGACTTTCAAACTGGTCTGGTTGGATGGCTTATAAAATCTGTGACATTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494033.1
CDS CCA 90 bp GGCCACATTTTGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGTCATTGTGAATCAGCGATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: GHILKDDMGKVGSLQ*DFLKGCHCESAMWK
Trigger: TTTCCACATCGCTGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS-3UTR CAA 90 bp AGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTATTCTCCATCATCATTaGGAAGGTAATATCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RVHESIRSMVSSVVYFRCILHHH*EGNILG
Trigger: TCCAAGGATATTACCTTCCAAATGATGATGGAGAAT...ACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTCAACTGACATTCAAGTaGTTCTCTTTCATGTTGTGC +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVQLTFK*FSFMLC
Trigger: GCACAACATGAAAGAGAACAACTTGAATGTCAGTTG...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTACACAGACTTGCCCCTTaGTTACTATGTCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILHRLAP*LLCQNL
Trigger: CAGATTTTGACATAGTAACAAAGGGGCAAGTCTGTG...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp AGTAAAGGGTGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAACATTCTCATCTTCTTaGCTATCCTCAGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: SKGCMKASALWSPQWSILTFSSS*LSSESS
Trigger: AGAGGACTCTGAGGATAGCAAAGAAGATGAGAATGT...TAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCACCCTTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAAACAGCGGTTGTGTTTaGGCCTCAAAAGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKNSGCV*ASKVFC
Trigger: GCAGAAAACTTTTGAGGCCAAAACACAACCGCTGTT...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 90 bp CACAGAAGCAAATGTGTCCCATTCGAATTCATCATAGTCTTCTGTTaGCGTAAAACCCTGACAAACCTTGCAATAGCACCAGAAAGGATA +
Preference number: 5 (lower is better)
Translates to: HRSKCVPFEFIIVFC*RKTLTNLAIAPERI
Trigger: TATCCTTTCTGGTGCTATTGCAAGGTTTGTCAGGGTTTTACGGCAACAGAAGACTATGATGAATTCGAATGGGACACATTTGCTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418691.5
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTAATGCTAGTACACAATaGACTGTTGATCCTTCCACA +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFNASTQ*TVDPST
Trigger: TGTGGAAGGATCAACAGTCAATTGTGTACTAGCATT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp GCATTTAGTTTAAGTTCTGCCACTGCATCAGCTAACTGCTTTTTCACTTTCTCGACCCTTTTGTTCTGCTaGCAGTTGGTCACATCTTTC +
Preference number: 5 (lower is better)
Translates to: AFSLSSATASANCFFTFSTLLFC*QLVTSF
Trigger: GAAAGATGTGACCAACTGCAAGCAGAACAAAAGGGT...CGAGAAAGTGAAAAAGCAGTTAGCTGATGCAGTGGCAGAACTTAAACTAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTAAGCAGGAAAGTTCTTaGCAGATTTTCCTTTTCAGC +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFKQESS*QIFLFS
Trigger: GCTGAAAAGGAAAATCTGCAAAGAACTTTCCTGCTT...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp TGTCAGCAATTTCTTTGGTCATTTCACAGACTTGCCCCTTTGTTACTATGTCAAGTTCTGTCTCGTACGTaGACAGCATCACTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: CQQFLWSFHRLAPLLLCQVLSRT*TASLSS
Trigger: AGAACTCAGTGATGCTGTCAACGTACGAGACAGAAC...TTGACATAGTAACAAAGGGGCAAGTCTGTGAAATGACCAAAGAAATTGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTCACAGACTTGCCCCTTaGTTACTATGTCAAAATCTG +
Preference number: 5 (lower is better)
Translates to: MKASALWSPQWSILGVVFHRLAP*LLCQNL
Trigger: CAGATTTTGACATAGTAACAAAGGGGCAAGTCTGTG...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000433216.6
ENST00000457186.2
ENST00000543117.5
CDS-3UTR CAA 90 bp TGCATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTATTGGACATTCAGTTaGAATCGTAACTCCACAGAA +
Preference number: 5 (lower is better)
Translates to: CMKASALWSPQWSILGVVYWTFS*NRNSTE
Trigger: TTCTGTGGAGTTACGATTCAAACTGAATGTCCAATA...AACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543117.5
CDS-3UTR CAA 90 bp GGGTACAGTAAGAAAAGCTGTAGTAGAACCCCAGCATGTTCCTCTGGTTTAAAAATTACAAAGATGGCATaGCTTACACTGCCTTCCATG +
Preference number: 5 (lower is better)
Translates to: GYSKKSCSRTPACSSGLKITKMA*LTLPSM
Trigger: CATGGAAGGCAGTGTAAGCAATGCCATCTTTGTAAT...TTTTAAACCAGAGGAACATGCTGGGGTTCTACTACAGCTTTTCTTACTGTACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 90 bp GGCCACATTTTGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGTCATTGTGAATCTGCTTTTGTTATC +
Preference number: 5 (lower is better)
Translates to: GHILKDDMGKVGSLQ*DFLKGCHCESAFVI
Trigger: GATAACAAAAGCAGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418691.5
ENST00000543117.5
CDS-3UTR CAA 90 bp TCAGCTAACTGCTTTTTCACTTTCTCGTTTTCCAAGCGTGCAGTATGCAGGTCTTGTGCCTTCTTGAGTTaGTCCTTTAAACTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: SANCFFTFSFSKRAVCRSCAFLS*SFKLSN
Trigger: ATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACA...AGACCTGCATACTGCACGCTTGGAAAACGAGAAAGTGAAAAAGCAGTTAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS-3UTR CAA 90 bp CATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTGTGCCTTCTTGAGTTaGTCCTTTAAACTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: HESIRSMVSSVVYFRCGFCAFLS*SFKLSN
Trigger: ATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACA...AAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTTACCAACCCAATCTTTaGGATGTGGATGAATATATG +
Preference number: 5 (lower is better)
Translates to: MKASALWSPQWSILGVVFYQPNL*DVDEYM
Trigger: CATATATTCATCCACATCCAAAAGATTGGGTTGGTA...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp ATGAAAGCATCCGCTCTATGGTCTCCTCAGTGGTCTATTTTAGGTGTGGTTTTTTGTGCCTTCTTGAGTTaGTCCTTTAAACTGTCTAAT +
Preference number: 5 (lower is better)
Translates to: MKASALWSPQWSILGVVFCAFLS*SFKLSN
Trigger: ATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACA...AAAAACCACACCTAAAATAGACCACTGAGGAGACCATAGAGCGGATGCTTTCAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000433216.6
ENST00000543117.5
CDS-3UTR CAA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTCTGACAGGTGGCCTTaGTATTTCATCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFSDRWP*YFIWVK
Trigger: TTTTACCCAGATGAAATACAAAGGCCACCTGTCAGA...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS TCA 90 bp TTTTGCTTGTTGTATATGTTGCCTTCCTATATTGGACATTCAGTTTaGATCGTAACTCCACAGAAGCAAATGTGTCCCATTCGAATTCAT +
Preference number: 5 (lower is better)
Translates to: FCLLYMLPSYIGHSV*IVTPQKQMCPIRIH
Trigger: ATGAATTCGAATGGGACACATTTGCTTCTGTGGAGTTACGATTCAAACTGAATGTCCAATATAGGAAGGCAACATATACAACAAGCAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418691.5
ENST00000543117.5
CDS-3UTR CAA 90 bp TCATGTTGTGCCTTCTTGAGTTTGTCCTTTAAACTGTCTAATTCGGTTTCTTTTTTGTCAGCAATTTCTTaGGTCATTTCACAGACTTGC +
Preference number: 5 (lower is better)
Translates to: SCCAFLSLSFKLSNSVSFLSAIS*VISQTC
Trigger: GCAAGTCTGTGAAATGACCAAAGAAATTGCTGACAA...AAAAGAAACCGAATTAGACAGTTTAAAGGACAAACTCAAGAAGGCACAACATGA
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000416801.6
CDS GCA 72 bp GGTTGTAAGGGAATAGCCGTGTTTGCAGTCCCCTGGTaGCGGGAGTGCCCTCTCCCTGGGCCGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: GCKGIAVFAVPW*RECPLPGPSAL
Trigger: CAGCGCTGACGGCCCAGGGAGAGGGCACTCCCGGCACCAGGGGACTGCAAACACGGCTATTCCCTTACAACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 72 bp GCCACGGCCACATCTCCTGTCCTGGAAGTGGCCGGGTaGACCTGTGGGGAGATGAGCGCTCCTGACAGTCCT +
Preference number: 6 (lower is better)
Translates to: ATATSPVLEVAG*TCGEMSAPDSP
Trigger: AGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAGGACAGGAGATGTGGCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 72 bp AGTGGCCGGGTGAACCTGTGGGGAGATGAGCGCTCCTaGCAGTCCTTGCACTTCTCTTGTCCTGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: SGRVNLWGDERS*QSLHFSCPAGS
Trigger: GCTGCCTGCAGGACAAGAGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS TCA 72 bp CGGATCAAGGGAGAAAGTTACGCAGGCTTCCGATCCTaGTCCGCCATCAGCCGCCGAACCTCTTCCGCCACT +
Preference number: 6 (lower is better)
Translates to: RIKGESYAGFRS*SAISRRTSSAT
Trigger: AGTGGCGGAAGAGGTTCGGCGGCTGATGGCGGATCAGGATCGGAAGCCTGCGTAACTTTCTCCCTTGATCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000416801.6
ENST00000433216.6
ENST00000490455.1
CDS TCA 72 bp CAAGGGAGTGACCACACGGCTAGGGCTGCAAACCCCTaGGCACCAAGACTGTCTCTGAACTCCTGGCCCAGT +
Preference number: 6 (lower is better)
Translates to: QGSDHTARAANP*APRLSLNSWPS
Trigger: ACTGGGCCAGGAGTTCAGAGACAGTCTTGGTGCTCAGGGGTTTGCAGCCCTAGCCGTGTGGTCACTCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS TCA 72 bp CTGTCCTGGAAGTGGCCGGGTGAACCTGTGGGGAGATaGGCGCTCCTGACAGTCCTTGCACTTCTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: LSWKWPGEPVGR*ALLTVLALLLS
Trigger: GGACAAGAGAAGTGCAAGGACTGTCAGGAGCGCTCATCTCCCCACAGGTTCACCCGGCCACTTCCAGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS CCA 72 bp CTTGTCCTGCAGGCAGCGAGTATGACGAGGAGGAGGTaGACTATGAGGAGTCGGACAGCGATGAGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: LVLQAASMTRRR*TMRSRTAMSPG
Trigger: TCCAGGACTCATCGCTGTCCGACTCCTCATAGTCCACCTCCTCCTCGTCATACTCGCTGCCTGCAGGACAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488564.2
CDS GCA 72 bp GTCGCTGTGGGAAGAGTTACAAGACAGCTCAGGGCCTaGGGCACCACACAATCAATTTCCATCCCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: VAVGRVTRQLRA*GTTQSISIPRC
Trigger: ACACCGGGGGATGGAAATTGATTGTGTGGTGCCGCAGGCCCTGAGCTGTCTTGTAACTCTTCCCACAGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS CCA 72 bp GAATCAGCGATGTGGAAAGGGCAGCTCAGAGGTCCATaGACAGTACCGTATCCCTGTCTGCGTCTCAGTCGG +
Preference number: 6 (lower is better)
Translates to: ESAMWKGQLRGP*TVPYPCLRLSR
Trigger: CCGACTGAGACGCAGACAGGGATACGGTACTGTCCATGGACCTCTGAGCTGCCCTTTCCACATCGCTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS CCA 72 bp ACAGATTCGTGTCCGCAAACCATTCAAGTGTCGCTGTaGGAAGAGTTACAAGACAGCTCAGGGCCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: TDSCPQTIQVSL*EELQDSSGPAA
Trigger: TGCCGCAGGCCCTGAGCTGTCTTGTAACTCTTCCCACAGCGACACTTGAATGGTTTGCGGACACGAATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS TCA 72 bp GCACCACACAATCAATTTCCATCCCCCGGTGTCGGCTaGGATTATCAGGAAGATGCAGCAATAACATGCTGG +
Preference number: 6 (lower is better)
Translates to: APHNQFPSPGVG*DYQEDAAITCW
Trigger: CCAGCATGTTATTGCTGCATCTTCCTGATAATCTCAGCCGACACCGGGGGATGGAAATTGATTGTGTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS GCA 72 bp TCCATCCCCCGGTGTCGGCTGAGATTATCAGGAAGATaGAGCAATAACATGCTGGTCATAACTGTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: SIPRCRLRLSGR*SNNMLVITVPR
Trigger: TCTTGGCACAGTTATGACCAGCATGTTATTGCTGCATCTTCCTGATAATCTCAGCCGACACCGGGGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS GCA 72 bp ACCAGAATGTCCTTGAAGGGTCCCAACTGGAGTCCTTaGAAAAGACTACACTCTAAACAGCTGCCATCCAGG +
Preference number: 6 (lower is better)
Translates to: TRMSLKGPNWSP*KRLHSKQLPSR
Trigger: CCTGGATGGCAGCTGTTTAGAGTGTAGTCTTTTGCAAGGACTCCAGTTGGGACCCTTCAAGGACATTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS TCA 72 bp GTCACAGATTTTATAAGCCATCCAACCAGACCAGTTTaGAAGTCTGGAGTTGTAGCTGCCCAGCAGGCATGC +
Preference number: 6 (lower is better)
Translates to: VTDFISHPTRPV*KSGVVAAQQAC
Trigger: GCATGCCTGCTGGGCAGCTACAACTCCAGACTTTCAAACTGGTCTGGTTGGATGGCTTATAAAATCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494033.1
CDS CAA 72 bp ACTGTCTCTGAACTCCTGGCCCAGTCGTGTGCTTTTTaGGCTATGAAGTTTTGTTCACTGAAAGCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: TVSELLAQSCAF*AMKFCSLKAPR
Trigger: CCTAGGAGCTTTCAGTGAACAAAACTTCATAGCCAAAAAAGCACACGACTGGGCCAGGAGTTCAGAGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS CAA 72 bp ACAGCTGCCATCCAGGAACTGCAATCCAGACCCAAATaGAGGTTTCCGAAGTTTGACAGGTATCCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: TAAIQELQSRPK*RFPKFDRYPVN
Trigger: ATTCACAGGATACCTGTCAAACTTCGGAAACCTCAATTTGGGTCTGGATTGCAGTTCCTGGATGGCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460059.1
CDS CAA 72 bp TGTCACAGATTTTATAAGCCATCCAACCAGACCAGTTaGAAAGTCTGGAGTTGTAGCTGCCCAGCAGGCATG +
Preference number: 6 (lower is better)
Translates to: CHRFYKPSNQTS*KVWSCSCPAGM
Trigger: CATGCCTGCTGGGCAGCTACAACTCCAGACTTTCAAACTGGTCTGGTTGGATGGCTTATAAAATCTGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494033.1
CDS CAA 90 bp ATGACATTCCAGGTGTGCATTAGGAAGGTAACTCTTGGCCACATTTaGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATGGGACTTC +
Preference number: 6 (lower is better)
Translates to: MTFQVCIRKVTLGHI*KDDMGKVGSLQWDF
Trigger: GAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAAAATGTGGCCAAGAGTTACCTTCCTAATGCACACCTGGAATGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000416801.6
ENST00000418691.5
ENST00000422800.5
ENST00000433216.6
ENST00000490455.1
ENST00000543117.5
CDS TCA 72 bp ACATGGGCAAAGTTGGAAGTCTGCAATGGGACTTCTTaGAAGGATGTCATTGTGAATCAGCGATGTGGAAAG +
Preference number: 6 (lower is better)
Translates to: TWAKLEVCNGTS*KDVIVNQRCGK
Trigger: CTTTCCACATCGCTGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS GCA 72 bp AACTGGAGAAGAAGCTCGAAACTGGAAAGGTGTACTTaGTCCACGAATTTCACCCTTATGGGTAACGTAACA +
Preference number: 6 (lower is better)
Translates to: NWRRSSKLERCT*STNFTLMGNVT
Trigger: TGTTACGTTACCCATAAGGGTGAAATTCGTGGAGCAAGTACACCTTTCCAGTTTCGAGCTTCTTCTCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000418691.5
ENST00000543117.5
CDS CCA 72 bp TTGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGTCATTGTGAATCAGCG +
Preference number: 6 (lower is better)
Translates to: LKDDMGKVGSLQ*DFLKGCHCESA
Trigger: CGCTGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422800.5
CDS TCA 72 bp ACATGGGCAAAGTTGGAAGTCTGCAATGGGACTTCTTaGAAGGATGTCATTGTGAATCTGCTTTTGTTATCC +
Preference number: 6 (lower is better)
Translates to: TWAKLEVCNGTS*KDVIVNLLLLS
Trigger: GGATAACAAAAGCAGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418691.5
ENST00000543117.5
CDS GCA 72 bp AAATGTGTCCCATTCGAATTCATCATAGTCTTCTGTTaGCGTAAAACCCTGACAAACCTTGCAATAGCACCA +
Preference number: 6 (lower is better)
Translates to: KCVPFEFIIVFC*RKTLTNLAIAP
Trigger: TGGTGCTATTGCAAGGTTTGTCAGGGTTTTACGGCAACAGAAGACTATGATGAATTCGAATGGGACACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418691.5
CDS CCA 72 bp TTGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGTCATTGTGAATCCAGT +
Preference number: 6 (lower is better)
Translates to: LKDDMGKVGSLQ*DFLKGCHCESS
Trigger: ACTGGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265393.10
ENST00000396319.7
ENST00000409980.5
ENST00000416801.6
ENST00000433216.6
ENST00000490455.1
CDS CCA 72 bp TTGAAAGATGACATGGGCAAAGTTGGAAGTCTGCAATaGGACTTCTTGAAAGGATGTCATTGTGAATCTGCT +
Preference number: 6 (lower is better)
Translates to: LKDDMGKVGSLQ*DFLKGCHCESA
Trigger: AGCAGATTCACAATGACATCCTTTCAAGAAGTCCCATTGCAGACTTCCAACTTTGCCCATGTCATCTTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418691.5
ENST00000543117.5
CDS CAA 90 bp CTTTTGCTTGTTGTATATGTTGCCTTCCTATATTGGACATTCAGTTaGAATCGTAACTCCACAGAAGCAAATGTGTCCCATTCGAATTCA +
Preference number: 6 (lower is better)
Translates to: LLLVVYVAFLYWTFS*NRNSTEANVSHSNS
Trigger: TGAATTCGAATGGGACACATTTGCTTCTGTGGAGTTACGATTCAAACTGAATGTCCAATATAGGAAGGCAACATATACAACAAGCAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418691.5
ENST00000543117.5
CDS CAA 90 bp CAATGGAGTACAACATCTTTAATGGCAATAAGACATCTAGTTTCATaGAGTTCTGCAGTTTTCAGTCCTTACCTTGGAATGCTAGTACAC +
Preference number: 6 (lower is better)
Translates to: QWSTTSLMAIRHLVS*SSAVFSPYLGMLVH
Trigger: GTGTACTAGCATTCCAAGGTAAGGACTGAAAACTGCAGAACTCAATGAAACTAGATGTCTTATTGCCATTAAAGATGTTGTACTCCATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490455.1
CDS GCA 72 bp TTTAATGGCAATAAGACATCTAGTTTCATTGAGTTCTaGAGTTTTCAGTCCTTACCTTGGAATGCTAGTACA +
Preference number: 6 (lower is better)
Translates to: FNGNKTSSFIEF*SFQSLPWNAST
Trigger: TGTACTAGCATTCCAAGGTAAGGACTGAAAACTGCAGAACTCAATGAAACTAGATGTCTTATTGCCATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490455.1