RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TATDN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157014

Ensembl transcript IDs: ENST00000287652.8, ENST00000426850.1, ENST00000448281.7, ENST00000496355.1

Found 336 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGACAGGACACAGGAGAGGCAAAGCCAAGGGGGCACCCAGGAGATaGGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTAT +
Preference number: 1 (lower is better)
Translates to: KTGHRRGKAKGAPRR*GRRTGTFADTRPAY
Trigger: ATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCTTTGCCTCTCCTGTGTCCTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 90 bp GAGAGGCAAAGCCAAGGGGGCACCCAGGAGATGCGGGAGAAGGACTaGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAAT +
Preference number: 1 (lower is better)
Translates to: ERQSQGGTQEMREKD*YICRHQACLFCIDN
Trigger: ATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCTTTGCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 90 bp CGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTaGATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGG +
Preference number: 1 (lower is better)
Translates to: REKDWYICRHQACLF*IDNVTWLSCPAELR
Trigger: CCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 90 bp AGCCAAGGGGGCACCCAGGAGATGCGGGAGAAGGACTGGTACATTTaGAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGG +
Preference number: 1 (lower is better)
Translates to: SQGGTQEMREKDWYI*RHQACLFCIDNVTW
Trigger: CCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 90 bp AGCACAGACAACATAACAGCACAGCTAATCCGTGAAGACGGACAGTaGATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGGC +
Preference number: 1 (lower is better)
Translates to: STDNITAQLIREDGQ*IKAEFQASDLCTRG
Trigger: GCCCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGATTAGCTGTGCTGTTATGTTGTCTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 90 bp TTACAAGGCACCAGCAGGCGGCAGAGCAGAGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAA +
Preference number: 1 (lower is better)
Translates to: LQGTSRRQSRAQDLR*LSCSKGEGEALTSK
Trigger: TTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGCTCTGCTCTGCCGCCTGCTGGTGCCTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTaGCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCTCAACC +
Preference number: 1 (lower is better)
Translates to: HQACLFCIDNVTWLS*PAELRRITLIHLST
Trigger: GGTTGAGAGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 90 bp TGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCTCAACCTaGGCGGGGTACACAAAGGACTGTACACAAGATGAAATGAGGATT +
Preference number: 1 (lower is better)
Translates to: CPAELRRITLIHLST*AGYTKDCTQDEMRI
Trigger: AATCCTCATTTCATCTTGTGTACAGTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 90 bp ATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACATaGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCAC +
Preference number: 1 (lower is better)
Translates to: ICRHQACLFCIDNVT*LSCPAELRRITLIH
Trigger: GTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 90 bp ATTTTACAATTTAAGCCTCCAAGACCACAGACGAGGGACTCCAGGTaGTCTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAA +
Preference number: 1 (lower is better)
Translates to: ILQFKPPRPQTRDSR*SIHLTADQGEGSFE
Trigger: TTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTGGAGGCTTAAATTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCGTAACATGGCTGAGCTaGCCAGCAGAGCTTCGGAGA +
Preference number: 2 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSVTWLS*PAELRR
Trigger: TCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTAC...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGTGCCGACGCTGGAGTTaGCACCAGAACAGTGACAGT +
Preference number: 2 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRCRRWS*HQNSDS
Trigger: ACTGTCACTGTTCTGGTGTCAACTCCAGCGTCGGCA...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGCTCCATCATGGACAATaGGTGCTCCTCTGCACCCCC +
Preference number: 2 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGLHHGQ*VLLCTP
Trigger: GGGGGTGCAGAGGAGCACTCATTGTCCATGATGGAG...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGCAGCTGAAGTCCTTCTaGCTGTGCCGACGCTGGAGT +
Preference number: 2 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRQLKSF*LCRRWS
Trigger: ACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTG...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCACTCCATCATGGACAATaGGTGCTCCTCTGCACCCCC +
Preference number: 2 (lower is better)
Translates to: HQACLFCIDNVTWLSCPALHHGQ*VLLCTP
Trigger: GGGGGTGCAGAGGAGCACTCATTGTCCATGATGGAG...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTCGTGAAGACGGACAGTaGATCAAGGCTGAGTTCCAG +
Preference number: 2 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAREDGQ*IKAEFQ
Trigger: CTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACG...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCAGGAAGTACCTCCTTTaGGGTCCTCTTCCCCAAGAA +
Preference number: 2 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSRKYLL*GPLPQE
Trigger: TTCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTTCGGAGAATTACGCTaGTTCACCTCTCAACCTGGG +
Preference number: 2 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGFGELR*FTSQPG
Trigger: CCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAA...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTAACGAGGGACTCCAGGTaGTCTATCCACCTCACTGCA +
Preference number: 2 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVTRDSR*SIHLTA
Trigger: TGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGT...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGGCACTCTTTCTTCTTTaGTGCCTACCCTGGAGCATT +
Preference number: 2 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVALFLL*CLPWSI
Trigger: AATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGC...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCAAGGACTGGTACATTTaGAGACACCAGGCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSKDWYI*RHQACL
Trigger: TAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CAA 90 bp AAGCCAAGGGGGCACCCAGGAGATGCGGGAGAAGGACTGGTACATTaGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACATG +
Preference number: 2 (lower is better)
Translates to: KPRGHPGDAGEGLVH*QTPGLLILHRQCNM
Trigger: CATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCCGAGAACCAGGAACTaGGTTACACACCCACATGTG +
Preference number: 2 (lower is better)
Translates to: CNMAELPSRASENYADSPPRTRN*VTHPHV
Trigger: CACATGTGGGTGTGTAACTCAGTTCCTGGTTCTCGG...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGTGGCAGTGGAACCAATaGGACCAGCAGCTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LILHRQCNMAELPSRASEWQWNQ*DQQLKS
Trigger: GGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCA...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGT +
Preference number: 2 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRAQDLR*LSCSKG
Trigger: ACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGC...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTAATTCACCTCTCAACCTaGGCGGGGTACACAAAGGAC +
Preference number: 2 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVIHLST*AGYTKD
Trigger: GTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAAT...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGAAGCTGAAGCCTTATaGCCCGCTTGGAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: PGLLILHRQCNMAELPSREAEAL*PAWRKT
Trigger: TGTTTTCCTCCAAGCGGGTCATAAGGCTTCAGCTTC...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCACTCTTTCTTCTTTaGTGCCTACCCTGGAGCATT +
Preference number: 2 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGALFLL*CLPWSI
Trigger: AATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGC...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTCTCACAAGGCTCAAATaGGCCTTCCAAAAACACCTA +
Preference number: 2 (lower is better)
Translates to: PRLPTWANLQHRQHNSTALTRLK*AFQKHL
Trigger: TAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAG...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGTGTGTTCTGTCAGGCTaGTGGTCGCCCTTTTCTAGG +
Preference number: 2 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVCVLSG*WSPFSR
Trigger: CCTAGAAAAGGGCGACCAGCAGCCTGACAGAACACA...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448281.7
3UTR-3UTR CCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTCCTGGATCTCCATCATaGACAATGAGTGCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSPGSPS*TMSAPL
Trigger: CAGAGGAGCACTCATTGTCCATGATGGAGATCCAGG...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCCCGAGAACCAGGAACTaGGTTACACACCCACATGTG +
Preference number: 2 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSPRTRN*VTHPHV
Trigger: CACATGTGGGTGTGTAACTCAGTTCCTGGTTCTCGG...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGTGCAGACACCAGGCCTaGTTATTCTGCATAGACAAT +
Preference number: 2 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRCRHQA*LFCIDN
Trigger: ATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCA...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCCCGACTTCCCACATaGGCCAATCTGCAGCACAGA +
Preference number: 2 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLPRLPT*ANLQHR
Trigger: TCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGGACGACTTCACTGGTTaGAAGAAAATAAACCTCCGA +
Preference number: 2 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRDDFTG*KKINLR
Trigger: TCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTC...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCATGCGGGAGAAGGACTaGTACATTTGCAGACACCAG +
Preference number: 2 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSMREKD*YICRHQ
Trigger: CTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCAT...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAAGTAACATGGCTGAGCTaGCCAGCAGAGCTTCGGAGA +
Preference number: 2 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEVTWLS*PAELRR
Trigger: TCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTAC...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCAAGGACTGGTACATTTaGAGACACCAGGCCTGCTTA +
Preference number: 2 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSKDWYI*RHQACL
Trigger: TAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTT...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTGCAGAGCTCAGGACTTaGGATGACTCAGTTGCTCAA +
Preference number: 2 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLAELRT*DDSVAQ
Trigger: TTGAGCAACTGAGTCATCTCAAGTCCTGAGCTCTGC...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCTGCAGACACCAGGCCTaGTTATTCTGCATAGACAAT +
Preference number: 2 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSCRHQA*LFCIDN
Trigger: ATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCA...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGGGAGGACGACTTCACTaGTTGCAAGAAAATAAACCT +
Preference number: 2 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVGGRLH*LQENKP
Trigger: AGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCC...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACATCCCCCAGTCTGTCCTaGATCTCCATCATGGACAAT +
Preference number: 2 (lower is better)
Translates to: DWYICRHQACLFCIDNVTSPSLS*ISIMDN
Trigger: ATTGTCCATGATGGAGATCCAGGACAGACTGGGGGA...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGTTCTGTCAGGCTGCTaGTCGCCCTTTTCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRVLSGC*SPFSRR
Trigger: TCTCCTAGAAAAGGGCGACCAGCAGCCTGACAGAAC...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448281.7
3UTR-3UTR TCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGAAGCTGAAGCCTTATaGCCCGCTTGGAGGAAAACA +
Preference number: 2 (lower is better)
Translates to: IHSILAHKAQMRLPKTPREAEAL*PAWRKT
Trigger: TGTTTTCCTCCAAGCGGGTCATAAGGCTTCAGCTTC...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTATAGACAATGTAACATaGCTGAGCTGCCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLIDNVT*LSCPAE
Trigger: CTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTAT...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR GCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGGACGACTTCACTGGTTaGAAGAAAATAAACCTCCGA +
Preference number: 2 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKDDFTG*KKINLR
Trigger: TCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTC...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTAAAAAGTTTCCCAGTTaGAAGTCTGTTTTTAGAACC +
Preference number: 2 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSKKFPS*KSVFRT
Trigger: GGTTCTAAAAACAGACTTCCAACTGGGAAACTTTTT...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAAATAGACAATGTAACATaGCTGAGCTGCCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEIDNVT*LSCPAE
Trigger: CTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTAT...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGTTCGGAGAATTACGCTaGTTCACCTCTCAACCTGGG +
Preference number: 2 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTFGELR*FTSQPG
Trigger: CCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAA...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGCAGTTGCTCAAAAGGTaGAGGAGAGGCTCTCACTTC +
Preference number: 2 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTQLLKR*RRGSHF
Trigger: GAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTG...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGAAAAAGTTTCCCAGTTaGAAGTCTGTTTTTAGAACC +
Preference number: 2 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVKKFPS*KSVFRT
Trigger: GGTTCTAAAAACAGACTTCCAACTGGGAAACTTTTT...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR TCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGT +
Preference number: 2 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTAQDLR*LSCSKG
Trigger: ACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGC...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 72 bp CACAGGAGAGGCAAAGCCAAGGGGGCACCCAGGAGATaGGGGAGAAGGACTGGTACATTTGCAGACACCAGG +
Preference number: 3 (lower is better)
Translates to: HRRGKAKGAPRR*GRRTGTFADTR
Trigger: CCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCTTTGCCTCTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 72 bp AGCCAAGGGGGCACCCAGGAGATGCGGGAGAAGGACTaGTACATTTGCAGACACCAGGCCTGCTTATTCTGC +
Preference number: 3 (lower is better)
Translates to: SQGGTQEMREKD*YICRHQACLFC
Trigger: GCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCTGGGTGCCCCCTTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGGAGGAAGTACCTCCTTaGGGGTCCTCTTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGEEVPP*GSSSPR
Trigger: TCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCTC...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTTTCCAGGCCAGTGACTaGTGTACCAGGGGCAAGATG +
Preference number: 3 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAFQASD*CTRGKM
Trigger: CATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAA...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 72 bp ACCAGCAGGCGGCAGAGCAGAGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTC +
Preference number: 3 (lower is better)
Translates to: TSRRQSRAQDLR*LSCSKGEGEAL
Trigger: GAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGCTCTGCTCTGCCGCCTGCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 72 bp CAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTaGATCTCCATCATGGACAATGAGTGCTCCTCTGCA +
Preference number: 3 (lower is better)
Translates to: QESLFPESPSLS*ISIMDNECSSA
Trigger: TGCAGAGGAGCACTCATTGTCCATGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGAGCCTTATGACCCGCTaGGAGGAAAACATCCTGTCC +
Preference number: 3 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRSLMTR*EENILS
Trigger: GGACAGGATGTTTTCCTCCAAGCGGGTCATAAGGCT...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGCGCACTCTTTCTTCTTaGCTGCCTACCCTGGAGCAT +
Preference number: 3 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRRTLSS*LPTLEH
Trigger: ATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGCG...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 72 bp TTTAAGCCTCCAAGACCACAGACGAGGGACTCCAGGTaGTCTATCCACCTCACTGCAGATCAGGGTGAAGGA +
Preference number: 3 (lower is better)
Translates to: FKPPRPQTRDSR*SIHLTADQGEG
Trigger: TCCTTCACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTGGAGGCTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTAGCCTTATGACCCGCTaGGAGGAAAACATCCTGTCC +
Preference number: 3 (lower is better)
Translates to: CNMAELPSRASENYADSPSLMTR*EENILS
Trigger: GGACAGGATGTTTTCCTCCAAGCGGGTCATAAGGCT...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACGCACTCTTTCTTCTTaGCTGCCTACCCTGGAGCAT +
Preference number: 3 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVRTLSS*LPTLEH
Trigger: ATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGCG...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 72 bp CAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTaGCACCAGAACAGTGACAGTCAAACTGAAGAGTTA +
Preference number: 3 (lower is better)
Translates to: QLKSFCLCRRWS*HQNSDSQTEEL
Trigger: TAACTCTTCAGTTTGACTGTCACTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGGACGACTTCACTGGTaGCAAGAAAATAAACCTCCG +
Preference number: 3 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSGRLHW*QENKPP
Trigger: CGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCC...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCGAGGAAGTACCTCCTTaGGGGTCCTCTTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVEEVPP*GSSSPR
Trigger: TCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCTC...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 72 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTaGATAGACAATGTAACATGGCTGAGCTGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: DWYICRHQACLF*IDNVTWLSCPA
Trigger: TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR CCA 72 bp GAGCTTCGGAGAATTACGCTGATTCACCTCTCAACCTaGGCGGGGTACACAAAGGACTGTACACAAGATGAA +
Preference number: 3 (lower is better)
Translates to: ELRRITLIHLST*AGYTKDCTQDE
Trigger: TTCATCTTGTGTACAGTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 72 bp GTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTaGAAGAAAATAAACCTCCGAGATAGGTGTCCAGTT +
Preference number: 3 (lower is better)
Translates to: VIQGREEDDFTG*KKINLRDRCPV
Trigger: AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR-3UTR CAA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAAGAAGGACTGGTACATTaGCAGACACCAGGCCTGCTT +
Preference number: 3 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEEGLVH*QTPGLL
Trigger: AAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTC...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR GCA 72 bp TGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTaGCCAGCAGAGCTTCGGAGAATTACGCTGATTCAC +
Preference number: 3 (lower is better)
Translates to: CLFCIDNVTWLS*PAELRRITLIH
Trigger: GTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
3UTR TCA 72 bp GTTGGAAGTCTGTTTTTAGAACCGAGAACCAGGAACTaGGTTACACACCCACATGTGCTTAGACAAGTAGGC +
Preference number: 3 (lower is better)
Translates to: VGSLFLEPRTRN*VTHPHVLRQVG
Trigger: GCCTACTTGTCTAAGCACATGTGGGTGTGTAACTCAGTTCCTGGTTCTCGGTTCTAAAAACAGACTTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCAGACAGGGGCGGGGCCTaGGCCAAACGGAAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSDRGGA*AKRKAP
Trigger: GGGCGCCTTCCGTTTGGCGCAGGCCCCGCCCCTGTC...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGCTCCGGAACGAGCCCTaGGGCCCGCAGGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRLRNEP*GPQAGE
Trigger: CTCTCCGGCCTGCGGGCCGCAGGGCTCGTTCCGGAG...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGGGGCTTTCAGGCGCTTaGGGCTGCTGGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQGLSGA*GCWALQ
Trigger: CTGGAGGGCCCAGCAGCCCCAAGCGCCTGAAAGCCC...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGCGCCGCAGCCCGCCCTaGTCCTGCGGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGRRSPP*SCGPTR
Trigger: TCTGGTTGGGCCGCAGGAGCAGGGCGGGCTGCGGCG...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCACGCGACGCAGACCTCTaGGCTGGCCGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HQACLFCIDNVTWLSCPARDADL*AGRLEG
Trigger: CCCCTCCAGCCGGCCAGCTCAGAGGTCTGCGTCGCG...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTAGCCCGCCCTGCTCCTaGGGCCCAACCAGACCCGGG +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSSPPCS*GPTRPG
Trigger: CCCGGGTCTGGTTGGGCCGCAGGAGCAGGGCGGGCT...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGCGAACAGCGGGAAGTTaGGGCCAGCCAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQRTAGS*GQPDVQ
Trigger: CTGCACATCTGGCTGGCCTCAACTTCCCGCTGTTCG...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTGGCCTCCGCCCGAACTaGGACCACTCCGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPGLRPN*DHSGLR
Trigger: ACGGAGGCCGGAGTGGTCGCAGTTCGGGCGGAGGCC...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCGCGGAGCCACTCACGTaGGCTCGAACAGCGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSAEPLT*ARTAGS
Trigger: ACTTCCCGCTGTTCGAGCCCACGTGAGTGGCTCCGC...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCGCAGACCTCTGAGCTaGCCGGCTGGAGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPRRPLS*PAGGGH
Trigger: GTGGCCCCCTCCAGCCGGCCAGCTCAGAGGTCTGCG...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGATCAGGCGCTTGGGGCTaGTGGGCCCTCCAGAACGCG +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRSGAWG*WALQNA
Trigger: CGCGTTCTGGAGGGCCCAGCAGCCCCAAGCGCCTGA...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGCCTGGGCTGCATCGTTaGTGCTGCTGCCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRPGLHR*CCCLWR
Trigger: CCTCCACAGGCAGCAGCAGCAACGATGCAGCCCAGG...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACCGCGACGCAGACCTCTaGGCTGGCCGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINRDADL*AGRLEG
Trigger: CCCCTCCAGCCGGCCAGCTCAGAGGTCTGCGTCGCG...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTGGACCAGCCTTCCTCTaGGGCCTCCATGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAGPAFL*GLHVSG
Trigger: TCCAGAGACATGGAGGCCTCAGAGGAAGGCTGGTCC...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGGAACGAGCCCTaGGGCCCGCAGGCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINLRNEP*GPQAGE
Trigger: CTCTCCGGCCTGCGGGCCGCAGGGCTCGTTCCGGAG...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGCTGCTCCAGTTGTaGTTGACCTTGCCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRVLLQL*LTLPRS
Trigger: CGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCAC...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTCCCGCTCGGACGCCATaGGCACCTTTCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAPARTP*APFPLL
Trigger: AAGAAGAGGGAAAGGTGCCCATGGCGTCCGAGCGGG...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTTGCTCCAGTTGTGCTTaGCCTTGCCCCGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSCSSCA*PCPART
Trigger: CGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCA...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGAGGCTCCGGAACGGCTaGAGGTTTCAGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGRLRNG*RFQGDR
Trigger: CCTGTCTCCCTGAAACCTTCAGCCGTTCCGGAGCCT...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGCCGGGTAGCTGCCGGTaGAGCAATGCCTATGGATCT +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRPGSCR*SNAYGS
Trigger: AGATCCATAGGCATTGCTTCACCGGCAGCTACCCGG...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCATGTCAGCACTGCCGTaGAGCCCACAGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSMSALP*SPQTCW
Trigger: CCAACATGTCTGTGGGCTTCACGGCAGTGCTGACAT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACAAGCCCGCCCTGCTCCTaGGGCCCAACCAGACCCGGG +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTSPPCS*GPTRPG
Trigger: CCCGGGTCTGGTTGGGCCGCAGGAGCAGGGCGGGCT...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCGCCGCAGCCCGCCCTaGTCCTGCGGCCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLRRSPP*SCGPTR
Trigger: TCTGGTTGGGCCGCAGGAGCAGGGCGGGCTGCGGCG...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCGGGCTGCATCGTTGCTaGTGCTGCCTGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSGLHRC*CCLWRG
Trigger: ACCCCTCCACAGGCAGCAGCAGCAACGATGCAGCCC...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGGGCTGCATCGTTGCTaGTGCTGCCTGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSGLHRC*CCLWRG
Trigger: ACCCCTCCACAGGCAGCAGCAGCAACGATGCAGCCC...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCAGATGTGCAGGCAGGTaGTGTCCGCTGACGCGCCTC +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSRCAGR*CPLTRL
Trigger: GAGGCGCGTCAGCGGACACCACCTGCCTGCACATCT...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGTGGTCAGAAGCCAGATaGGGCGGAGCCACTCACGTG +
Preference number: 4 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGWSEAR*GGATHV
Trigger: CACGTGAGTGGCTCCGCCCCATCTGGCTTCTGACCA...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGTTCAAGATCCACACATaGCTGCCGGATCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRFKIHT*LPDPRP
Trigger: GGGCCGCGGATCCGGCAGCCATGTGTGGATCTTGAA...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GGTGAAGGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCACGCAGACCTCTGAGCTaGCCGGCTGGAGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GEGSFETKYSLLSLNPGPRRPLS*PAGGGH
Trigger: GTGGCCCCCTCCAGCCGGCCAGCTCAGAGGTCTGCG...TGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCCTTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGGCAGGTGGTGTCCGCTaGCGCGCCTCACTTAACGCT +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVAGGVR*RASLNA
Trigger: AGCGTTAAGTGAGGCGCGTCAGCGGACACCACCTGC...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR TCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCACCCACAACGTGCTTCTaGGATCAGGAAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSPTTCF*DQEAFT
Trigger: AGTGAAGGCTTCCTGATCTCAGAAGCACGTTGTGGG...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCAGGCTCCGGAACGGCTaGAGGTTTCAGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSRLRNG*RFQGDR
Trigger: CCTGTCTCCCTGAAACCTTCAGCCGTTCCGGAGCCT...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGGAAGCTGAAGCCTTATaGCCCGCTTGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQEAEAL*PAWRKT
Trigger: TGTTTTCCTCCAAGCGGGTCATAAGGCTTCAGCTTC...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGGCAGTGGAACCAATaGGACCAGCAGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGWQWNQ*DQQLKS
Trigger: GGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCA...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCACGTGAAGACGGACAGTaGATCAAGGCTGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSREDGQ*IKAEFQ
Trigger: CTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACG...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCACGGAAGGCGCCCATTaGTCGACCCGGCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVTEGAH*STRQGA
Trigger: CGCCCCTTGCCGGGTCGAGCAATGGGCGCCTTCCGT...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTGGCCTCCGCCCGAACTaGGACCACTCCGGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLGLRPN*DHSGLR
Trigger: ACGGAGGCCGGAGTGGTCGCAGTTCGGGCGGAGGCC...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCGCTACTTCGGAGATaGCTAAGCGCTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRALLRR*LSASGA
Trigger: AGCCCCGGAAGCGCTTAGGCATCTCCGAAGTAGCGC...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGACTGCATCGTTGCTGCTaGTGCCTGTGGAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRLHRCC*CLWRGS
Trigger: GCTACCCCTCCACAGGCAGCAGCAGCAACGATGCAG...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACTTCCCAACCTGGGCTaGATCGTTGCTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVLPNLG*IVAAAA
Trigger: GGCAGCAGCAGCAACGATGCAGCCCAGGTTGGGAAG...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGGGCAATCTGTCAGGGTaGGGGGATCACAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGGNLSG*GDHRSQ
Trigger: CTGACTTCTGTGATCCCCGCACCCTGACAGATTGCC...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCGGGCTTTCAGGCGCTTaGGGCTGCTGGGCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVGLSGA*GCWALQ
Trigger: CTGGAGGGCCCAGCAGCCCCAAGCGCCTGAAAGCCC...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCATTCACCTCTCAACCTaGGCGGGGTACACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSIHLST*AGYTKD
Trigger: GTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAAT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGCCCACAACGTGCTTCTaGGATCAGGAAGCCTTCACT +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRPTTCF*DQEAFT
Trigger: AGTGAAGGCTTCCTGATCTCAGAAGCACGTTGTGGG...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGGTGAGGGAGAGTGGCTaGTCTTTGACTCTGGCAATC +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGVRESG*SLTLAI
Trigger: GATTGCCAGAGTCAAAGATCAGCCACTCTCCCTCAC...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCAGCAGAGCTCAGGACTTaGGATGACTCAGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSAELRT*DDSVAQ
Trigger: TTGAGCAACTGAGTCATCTCAAGTCCTGAGCTCTGC...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGGCGCTACTTCGGAGATaGCTAAGCGCTTCCGGGGCT +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVALLRR*LSASGA
Trigger: AGCCCCGGAAGCGCTTAGGCATCTCCGAAGTAGCGC...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTTCAGGCGCTTGGGGCTaGTGGGCCCTCCAGAACGCG +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLSGAWG*WALQNA
Trigger: CGCGTTCTGGAGGGCCCAGCAGCCCCAAGCGCCTGA...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAATGGCTGGGATGCTCTaGTGCGCTTGGTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: HQACLFCIDNVTWLSCPAMAGML*CAWFCP
Trigger: CGGGCAAAACCAAGCGCAGCAGAGCATCCCAGCCAT...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CGGAGAATTACGCTGATTCACCTCTCAACCTGGGCGGGGTACACAAAGGACTGTGGGAATAATCACTCATaGGGCTCCGGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RRITLIHLSTWAGYTKDCGNNHS*GSGCSS
Trigger: GGAAGAGCAGCCGGAGCCGCATGAGTGATTATTCCC...ACAGTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTCAGCTGAAGTCCTTCTaGCTGTGCCGACGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSQLKSF*LCRRWS
Trigger: ACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTG...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCAGCTGAAGTCCTTCTaGCTGTGCCGACGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPQLKSF*LCRRWS
Trigger: ACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTG...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAATGCTCTGCTGCGCTTaGTTTTGCCCGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQACLFCIDNVTWLSCPAMLCCA*FCPSGS
Trigger: GCTGCCACTCGGGCAAAACCAAGCGCAGCAGAGCAT...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGTCCTTCTCCATGGCTaGGATGCTCTGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: HQACLFCIDNVTWLSCPAVLLHG*DALLRL
Trigger: CAAGCGCAGCAGAGCATCCCAGCCATGGAGAAGGAC...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGCTCCATGCTGACCTCTaGGGTTGCGTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGLHADL*GCVFLL
Trigger: AAGGAGAAAGACGCAACCCCAGAGGTCAGCATGGAG...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCTGCTCTTCCCAACCTaGGCTGCATCGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPLLFPT*AASLLL
Trigger: CAGCAGCAACGATGCAGCCCAGGTTGGGAAGAGCAG...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTCTGCTCTTCCCAACCTaGGCTGCATCGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSLLFPT*AASLLL
Trigger: CAGCAGCAACGATGCAGCCCAGGTTGGGAAGAGCAG...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCAAAGCGATCCAAAATTaGCTAAAGGCTGCCGTCGGT +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSKAIQN*LKAAVG
Trigger: ACCGACGGCAGCCTTTAGTCAATTTTGGATCGCTTT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTTGCCGACGCTGGAGTTaGCACCAGAACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPCRRWS*HQNSDS
Trigger: ACTGTCACTGTTCTGGTGTCAACTCCAGCGTCGGCA...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGCAGTTGCTCAAAAGGTaGAGGAGAGGCTCTCACTTC +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGQLLKR*RRGSHF
Trigger: GAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTG...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGAGCACAGCTAATCCGTaGAGACGGACAGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVSTANP*RRTVNQ
Trigger: TTGATTCACTGTCCGTCTTCACGGATTAGCTGTGCT...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGGAGGCCAGCCAGATGTaGAGGCAGGTGGTGTCCGCT +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKEASQM*RQVVSA
Trigger: AGCGGACACCACCTGCCTGCACATCTGGCTGGCCTC...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGATGGCTGGGATGCTCTaGTGCGCTTGGTTTTGCCCG +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVMAGML*CAWFCP
Trigger: CGGGCAAAACCAAGCGCAGCAGAGCATCCCAGCCAT...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGTCTCCATGGCTGGGATaGTCTGCTGCGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRSPWLG*SAALGF
Trigger: AAAACCAAGCGCAGCAGAGCATCCCAGCCATGGAGA...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCTCATGCGGCTCCGGCTaGTCTTCCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVSCGSG*SSQPGL
Trigger: CAGCCCAGGTTGGGAAGAGCAGCCGGAGCCGCATGA...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTAACATGGCTGAGCTaGCCAGCAGAGCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPVTWLS*PAELRR
Trigger: TCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTAC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCCAAAGCCAGGCGCCTTaGAGTCGGGACGGTACGCCT +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVQSQAP*SRDGTP
Trigger: AGGCGTACCGTCCCGACTCCAAGGCGCCTGGCTTTG...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCACTTCAGAAGACCACATaGCGCTTCAAGATCCACACA +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSLQKTT*RFKIHT
Trigger: TGTGTGGATCTTGAAGCGCCATGTGGTCTTCTGAAG...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGGATGCCAAACCGTGTTaGAGAAGTCAAAGCGATCCA +
Preference number: 4 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVDAKPC*RSQSDP
Trigger: TGGATCGCTTTGACTTCTCCAACACGGTTTGGCATC...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGGTCCTTCTCCATGGCTaGGATGCTCTGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVVLLHG*DALLRL
Trigger: CAAGCGCAGCAGAGCATCCCAGCCATGGAGAAGGAC...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCTCTCTGGAGGTGTTTTaGACACTCCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSSLEVF*TLPVEL
Trigger: CAACTCTACAGGGAGTGTCCAAAACACCTCCAGAGA...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTCCTGGATCTCCATCATaGACAATGAGTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAPGSPS*TMSAPL
Trigger: CAGAGGAGCACTCATTGTCCATGATGGAGATCCAGG...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGCCTGGATCTCCATCATaGACAATGAGTGCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGPGSPS*TMSAPL
Trigger: CAGAGGAGCACTCATTGTCCATGATGGAGATCCAGG...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTTCCCCCAGTCTGTCCTaGATCTCCATCATGGACAAT +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTASPSLS*ISIMDN
Trigger: ATTGTCCATGATGGAGATCCAGGACAGACTGGGGGA...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTAGGAAGTACCTCCTTTaGGGTCCTCTTCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTARKYLL*GPLPQE
Trigger: TTCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCT...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGGTACCAGGGGCAAGATaGAAATGCCAGATAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQVPGAR*KCQIGN
Trigger: ATTTCCTATCTGGCATTTCCATCTTGCCCCTGGTAC...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGGACTTCAGGGCTTGCTaGAGAGGAGATGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGDFRAC*RGDGCA
Trigger: AGCACAACCATCTCCTCTCCAGCAAGCCCTGAAGTC...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGGATGGCACAGGCTTaGAGACTTCCATGTCATCTC +
Preference number: 4 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGWMAQA*RLPCHL
Trigger: GAGATGACATGGAAGTCTCCAAGCCTGTGCCATCCA...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTTGGATGGCACAGGCTTaGAGACTTCCATGTCATCTC +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAWMAQA*RLPCHL
Trigger: GAGATGACATGGAAGTCTCCAAGCCTGTGCCATCCA...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GGTGAAGGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCAGGACCAGCCTTCCTCTaGGGCCTCCATGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GEGSFETKYSLLSLNPGPGPAFL*GLHVSG
Trigger: TCCAGAGACATGGAGGCCTCAGAGGAAGGCTGGTCC...TGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCCTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGGACAATGAGTGTCAATaGAGCCCTCCTCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGDNECQ*SPPLGL
Trigger: CAAGCCTAGAGGAGGGCTTCATTGACACTCATTGTC...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGACCGAGAACCAGGAACTaGGTTACACACCCACATGTG +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRPRTRN*VTHPHV
Trigger: CACATGTGGGTGTGTAACTCAGTTCCTGGTTCTCGG...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGACGAGGGACTCCAGGTaGTCTATCCACCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVTRDSR*SIHLTA
Trigger: TGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGT...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTAGGAAGCCTTCACTTTaGCCAGCGCTACTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSRKPSL*PALLRR
Trigger: TCTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCT...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACGTGCTGCTCCAGTTGTaGTTGACCTTGCCCCGCTCG +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINVLLQL*LTLPRS
Trigger: CGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCAC...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGCACTCTTTCTTCTTTaGTGCCTACCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRALFLL*CLPWSI
Trigger: AATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGC...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCATAAACACTTTGATATaGTCGGCAGTCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSINTLI*SAVPQV
Trigger: GACTTGGGGGACTGCCGAGCATATCAAAGTGTTTAT...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCATGTGTTCTGTCAGGCTaGTGGTCGCCCTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: HQACLFCIDNVTWLSCPACVLSG*WSPFSR
Trigger: CCTAGAAAAGGGCGACCAGCAGCCTGACAGAACACA...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448281.7
CDS-3UTR CCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGTTCAAGATCCACACATaGCTGCCGGATCCGCGGCCC +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKFKIHT*LPDPRP
Trigger: GGGCCGCGGATCCGGCAGCCATGTGTGGATCTTGAA...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTCTCCATGCTGACCTCTaGGGTTGCGTCTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPLHADL*GCVFLL
Trigger: AAGGAGAAAGACGCAACCCCAGAGGTCAGCATGGAG...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCATTCACCTCTCAACCTaGGCGGGGTACACAAAGGAC +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSIHLST*AGYTKD
Trigger: GTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAAT...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGATGCGGGAGAAGGACTaGTACATTTGCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRMREKD*YICRHQ
Trigger: CTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCAT...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTTCTGTCAGGCTGCTaGTCGCCCTTTTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPVLSGC*SPFSRR
Trigger: TCTCCTAGAAAAGGGCGACCAGCAGCCTGACAGAAC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448281.7
CDS-3UTR TCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACGCCGGCCGCTGTACCTaGAGCTTTCAGACCTGGATT +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINAGRCT*SFQTWI
Trigger: AATCCAGGTCTGAAAGCTTCAGGTACAGCGGCCGGC...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR TCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCAGGCTACGAAGCGCTTTaGTCAGTTTGCAATATAAAG +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSGYEAL*SVCNIK
Trigger: CTTTATATTGCAAACTGATCAAAGCGCTTCGTAGCC...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGACAATGAGTGTCAATaGAGCCCTCCTCTAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRDNECQ*SPPLGL
Trigger: CAAGCCTAGAGGAGGGCTTCATTGACACTCATTGTC...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CAGAATGTGAGTTTTACGACCTTTTCTAGGAGACTCCCGAGGACTGTACCTTCTCCGGGTAGCTGCCGGTaGAGCAATGCCTATGGATCT +
Preference number: 4 (lower is better)
Translates to: QNVSFTTFSRRLPRTVPSPGSCR*SNAYGS
Trigger: AGATCCATAGGCATTGCTTCACCGGCAGCTACCCGG...AGAAGGTACAGTCCTCGGGAGTCTCCTAGAAAAGGTCGTAAAACTCACATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426850.1
CDS-3UTR TCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGGTGAGGGAGAGTGGCTaGTCTTTGACTCTGGCAATC +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASEVRESG*SLTLAI
Trigger: GATTGCCAGAGTCAAAGATCAGCCACTCTCCCTCAC...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGAAGCTGAAGCCTTATaGCCCGCTTGGAGGAAAACA +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPEAEAL*PAWRKT
Trigger: TGTTTTCCTCCAAGCGGGTCATAAGGCTTCAGCTTC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCTGCCGACGCTGGAGTTaGCACCAGAACAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSCRRWS*HQNSDS
Trigger: ACTGTCACTGTTCTGGTGTCAACTCCAGCGTCGGCA...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCACGAGGGACTCCAGGTaGTCTATCCACCTCACTGCA +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSTRDSR*SIHLTA
Trigger: TGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGT...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGAGCACAGCTAATCCGTaGAGACGGACAGTGAATCAA +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRSTANP*RRTVNQ
Trigger: TTGATTCACTGTCCGTCTTCACGGATTAGCTGTGCT...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGTCAAGGTTTCAGAGATaGCAAACCGTGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRSRFQR*QTVLEK
Trigger: CTTCTCCAACACGGTTTGGCATCTCTGAAACCTTGA...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACACTGCATCGTTGCTGCTaGTGCCTGTGGAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTLHRCC*CLWRGS
Trigger: GCTACCCCTCCACAGGCAGCAGCAGCAACGATGCAG...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTCCTGGGCTGCATCGTTaGTGCTGCTGCCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIPGLHR*CCCLWR
Trigger: CCTCCACAGGCAGCAGCAGCAACGATGCAGCCCAGG...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGATCATGCGGCTCCGGCTaGTCTTCCCAACCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRSCGSG*SSQPGL
Trigger: CAGCCCAGGTTGGGAAGAGCAGCCGGAGCCGCATGA...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGCTGGTCGCCCTTCTCTaGTTAAAGACTGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASELVALL*LKTVEA
Trigger: CGCCTCTACAGTCTTTAAGCAGAGAAGGGCGACCAG...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGGACGACTTCACTGGTTaGAAGAAAATAAACCTCCGA +
Preference number: 4 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVDDFTG*KKINLR
Trigger: TCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTC...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGCCACATGGGCCAATCTaGAGCACAGACAACATAACA +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRPHGPI*STDNIT
Trigger: TGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGG...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCATTTCTTCTGAGCTTCTaGAGAAGCGAAATGAACGAG +
Preference number: 4 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSFLLSF*RSEMNE
Trigger: CTCGTTCATTTCGCTTCTCCAGAAGCTCAGAAGAAA...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCTCCCCCAGTCTGTCCTaGATCTCCATCATGGACAAT +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSSPSLS*ISIMDN
Trigger: ATTGTCCATGATGGAGATCCAGGACAGACTGGGGGA...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACCCCCGACTTCCCACATaGGCCAATCTGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINPRLPT*ANLQHR
Trigger: TCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCCACCTCTCTTTCTTCTaGGCTTCTGGAGAAGCGAAA +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSHLSFF*ASGEAK
Trigger: TTTCGCTTCTCCAGAAGCTCAGAAGAAAGAGAGGTG...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCATGTCAGCACTGCCGTaGAGCCCACAGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVMSALP*SPQTCW
Trigger: CCAACATGTCTGTGGGCTTCACGGCAGTGCTGACAT...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AATGTGAGTTTTACGACCTTTTCTAGGAGACTCCCGAGGACTGTACCTTCTCTGATGTCAGCACTGCCGTaGAGCCCACAGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: NVSFTTFSRRLPRTVPSLMSALP*SPQTCW
Trigger: CCAACATGTCTGTGGGCTTCACGGCAGTGCTGACAT...CAGAGAAGGTACAGTCCTCGGGAGTCTCCTAGAAAAGGTCGTAAAACTCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426850.1
CDS-3UTR TCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACACTCCATCATGGACAATaGGTGCTCCTCTGCACCCCC +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTLHHGQ*VLLCTP
Trigger: GGGGGTGCAGAGGAGCACTCATTGTCCATGATGGAG...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGATGCTGCGCTTGGTTTTaGCCGAGTGGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRCCAWF*PSGSLS
Trigger: GGAGAGGCTGCCACTCGGGCAAAACCAAGCGCAGCA...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGTGTGTTCTGTCAGGCTaGTGGTCGCCCTTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKCVLSG*WSPFSA
Trigger: AGCAGAGAAGGGCGACCAGCAGCCTGACAGAACACA...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR GCA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTAAAGGACTGGTACATTTaGAGACACCAGGCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVKDWYI*RHQACL
Trigger: TAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTT...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAACCCGCTCGGACGCCATaGGCACCTTTCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEPARTP*APFPLL
Trigger: AAGAAGAGGGAAAGGTGCCCATGGCGTCCGAGCGGG...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGAGGAAGTACCTCCTTTaGGGTCCTCTTCCCCAAGAA +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVRKYLL*GPLPQE
Trigger: TTCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCT...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGTGCTCCAGTTGTGCTTaGCCTTGCCCCGCTCGGACG +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTCSSCA*PCPART
Trigger: CGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCA...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTTCACTGGGTTTCTCTTaGGGGTCTATAACTACTCTC +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPSLGFS*GSITTL
Trigger: GAGAGTAGTTATAGACCCTCAAGAGAAACCCAGTGA...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCAGAGTGGCTGATCTTTaGCTCTGGCAATCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSRVADL*LWQSLG
Trigger: TCCGAGAGATTGCCAGAGTCAAAGATCAGCCACTCT...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AATGTGAGTTTTACGACCTTTTCTAGGAGACTCCCGAGGACTGTACCTTCTCTGGTGAGGGAGAGTGGCTaGTCTTTGACTCTGGCAATC +
Preference number: 4 (lower is better)
Translates to: NVSFTTFSRRLPRTVPSLVRESG*SLTLAI
Trigger: GATTGCCAGAGTCAAAGATCAGCCACTCTCCCTCAC...CAGAGAAGGTACAGTCCTCGGGAGTCTCCTAGAAAAGGTCGTAAAACTCACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426850.1
CDS-3UTR TCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGACTCCATCATGGACAATaGGTGCTCCTCTGCACCCCC +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRLHHGQ*VLLCTP
Trigger: GGGGGTGCAGAGGAGCACTCATTGTCCATGATGGAG...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASEAQDLR*LSCSKG
Trigger: ACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGC...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGAGCCATCCAAAAAGCTaGATCAAAAACAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVSHPKS*IKNNAN
Trigger: ATTGGCATTGTTTTTGATTCAGCTTTTTGGATGGCT...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTAGGAAGCCTTCACTTTaGCCAGCGCTACTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVRKPSL*PALLRR
Trigger: TCTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCT...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGAAATTGACTAAAGGCTaGCGTCGGTTTCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVKLTKG*RRFPSP
Trigger: TGGGCTTGGAAACCGACGGCAGCCTTTAGTCAATTT...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTGGGAATAATCACTCATaGGGCTCCGGCTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLGNNHS*GSGCSS
Trigger: GGAAGAGCAGCCGGAGCCGCATGAGTGATTATTCCC...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACAGGCAATCTGTCAGGGTaGGGGGATCACAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTGNLSG*GDHRSQ
Trigger: CTGACTTCTGTGATCCCCGCACCCTGACAGATTGCC...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTATAAACACTTTGATATaGTCGGCAGTCCCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPINTLI*SAVPQV
Trigger: GACTTGGGGGACTGCCGAGCATATCAAAGTGTTTAT...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTAGGAGATGGTTGTGCTaGAGTTCACTTGGTGACTAT +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPRRWLC*SSLGDY
Trigger: ATAGTCACCAAGTGAACTGCAGCACAACCATCTCCT...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAAGGAGATGGTTGTGCTaGAGTTCACTTGGTGACTAT +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRRRWLC*SSLGDY
Trigger: ATAGTCACCAAGTGAACTGCAGCACAACCATCTCCT...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGCTTGGAAAGATAGCTTaGAATAGAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRLGKIA*NRACPG
Trigger: ACCTGGACATGCTCTATTCCAAGCTATCTTTCCAAG...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGATAGACAATGTAACATaGCTGAGCTGCCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASEIDNVT*LSCPAE
Trigger: CTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTAT...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAACCCCGACTTCCCACATaGGCCAATCTGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEPRLPT*ANLQHR
Trigger: TCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTGACTTCAGGGCTTGCTaGAGAGGAGATGGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVDFRAC*RGDGCA
Trigger: AGCACAACCATCTCCTCTCCAGCAAGCCCTGAAGTC...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCGGCTACGAAGCGCTTTaGTCAGTTTGCAATATAAAG +
Preference number: 4 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSGYEAL*SVCNIK
Trigger: CTTTATATTGCAAACTGATCAAAGCGCTTCGTAGCC...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGTCACTGGGTTTCTCTTaGGGGTCTATAACTACTCTC +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASESLGFS*GSITTL
Trigger: GAGAGTAGTTATAGACCCTCAAGAGAAACCCAGTGA...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AATGTGAGTTTTACGACCTTTTCTAGGAGACTCCCGAGGACTGTACCTTCTCTGAGAGTGGCTGATCTTTaGCTCTGGCAATCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: NVSFTTFSRRLPRTVPSLRVADL*LWQSLG
Trigger: TCCGAGAGATTGCCAGAGTCAAAGATCAGCCACTCT...CAGAGAAGGTACAGTCCTCGGGAGTCTCCTAGAAAAGGTCGTAAAACTCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426850.1
CDS-3UTR TCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTTGGCAGTGGAACCAATaGGACCAGCAGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIWQWNQ*DQQLKS
Trigger: GGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCA...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCTTCGGAGAATTACGCTaGTTCACCTCTCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVFGELR*FTSQPG
Trigger: CCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAA...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTATTCCCACAGCACAGTaGAAACAATTAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPIPTAQ*KQLAIQ
Trigger: TTGGATGGCTAATTGTTTTCACTGTGCTGTGGGAAT...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGACCCTCAGCTTCAGCTaGAAATTCAGAGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASETLSFS*KFRVCG
Trigger: TCCACAAACTCTGAATTTGCAGCTGAAGCTGAGGGT...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGTGCTGCGCTTGGTTTTaGCCGAGTGGCAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTCCAWF*PSGSLS
Trigger: GGAGAGGCTGCCACTCGGGCAAAACCAAGCGCAGCA...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGCTTCCCAACCTGGGCTaGATCGTTGCTGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTLPNLG*IVAAAA
Trigger: GGCAGCAGCAGCAACGATGCAGCCCAGGTTGGGAAG...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGACGACTTCACTGGTTaGAAGAAAATAAACCTCCGA +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPDDFTG*KKINLR
Trigger: TCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CCCCGACTTCCCACATGGGCCAATCTGCAGCACAGACAACATAACAGCACAGCTGGGGCAAGATGGAAATaGCAGATAGGAAATATTAAA +
Preference number: 4 (lower is better)
Translates to: PRLPTWANLQHRQHNSTAGARWK*QIGNIK
Trigger: TTTAATATTTCCTATCTGGCATTTCCATCTTGCCCC...AGCTGTGCTGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGGGAAGTCGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCCCACATGGGCCAATCTaGAGCACAGACAACATAACA +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSPHGPI*STDNIT
Trigger: TGTTATGTTGTCTGTGCTGCAGATTGGCCCATGTGG...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTCTGAATCAAAAACAATaGCAATCAGCTTTCACGCCC +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPLNQKQ*QSAFTP
Trigger: GGGCGTGAAAGCTGATTGGCATTGTTTTTGATTCAG...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTAGGAAGCTCGTCCATTaGTCAGAAGCCAGATGGGGC +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIRKLVH*SEARWG
Trigger: GCCCCATCTGGCTTCTGACCAATGGACGAGCTTCCT...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTAGGCCTCCATGTCTCTaGAGGTGTTTTGGACACTCC +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLRPPCL*RCFGHS
Trigger: GGAGTGTCCAAAACACCTCCAGAGACATGGAGGCCT...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTGGAGGACGACTTCACTaGTTGCAAGAAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPGGRLH*LQENKP
Trigger: AGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCC...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGGTACCAGGGGCAAGATaGAAATGCCAGATAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LILHRQCNMAELPSRASEVPGAR*KCQIGN
Trigger: ATTTCCTATCTGGCATTTCCATCTTGCCCCTGGTAC...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGCCGGGTAGCTGCCGGTaGAGCAATGCCTATGGATCT +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTPGSCR*SNAYGS
Trigger: AGATCCATAGGCATTGCTTCACCGGCAGCTACCCGG...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTAGAGTGGCTGATCTTTaGCTCTGGCAATCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLRVADL*LWQSLG
Trigger: TCCGAGAGATTGCCAGAGTCAAAGATCAGCCACTCT...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGACGTGAAGACGGACAGTaGATCAAGGCTGAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRREDGQ*IKAEFQ
Trigger: CTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACG...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTAAATTGACTAAAGGCTaGCGTCGGTTTCCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVKLTKG*RRFPSP
Trigger: TGGGCTTGGAAACCGACGGCAGCCTTTAGTCAATTT...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCACCCTCAGCTTCAGCTaGAAATTCAGAGTTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSTLSFS*KFRVCG
Trigger: TCCACAAACTCTGAATTTGCAGCTGAAGCTGAGGGT...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGATCTCCATGGCTGGGATaGTCTGCTGCGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRSPWLG*SAALGF
Trigger: AAAACCAAGCGCAGCAGAGCATCCCAGCCATGGAGA...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTAAGGACTGGTACATTTaGAGACACCAGGCCTGCTTA +
Preference number: 4 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVKDWYI*RHQACL
Trigger: TAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTT...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCCTCACAAGGCTCAAATaGGCCTTCCAAAAACACCTA +
Preference number: 4 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSLTRLK*AFQKHL
Trigger: TAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAG...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GGTGAAGGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCACTTCAGAAGACCACATaGCGCTTCAAGATCCACACA +
Preference number: 4 (lower is better)
Translates to: GEGSFETKYSLLSLNPGPLQKTT*RFKIHT
Trigger: TGTGTGGATCTTGAAGCGCCATGTGGTCTTCTGAAG...TGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCCTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTGATGCCAAACCGTGTTaGAGAAGTCAAAGCGATCCA +
Preference number: 4 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVDAKPC*RSQSDP
Trigger: TGGATCGCTTTGACTTCTCCAACACGGTTTGGCATC...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGATGCTCTGCTGCGCTTaGTTTTGCCCGAGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTMLCCA*FCPSGS
Trigger: GCTGCCACTCGGGCAAAACCAAGCGCAGCAGAGCAT...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAAAGGCCTCCATGTCTCTaGAGGTGTTTTGGACACTCC +
Preference number: 4 (lower is better)
Translates to: GSFETKYSLLSLNPGPLERPPCL*RCFGHS
Trigger: GGAGTGTCCAAAACACCTCCAGAGACATGGAGGCCT...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGCTTGGAAAGATAGCTTaGAATAGAGCATGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVLGKIA*NRACPG
Trigger: ACCTGGACATGCTCTATTCCAAGCTATCTTTCCAAG...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTATGCGGGAGAAGGACTaGTACATTTGCAGACACCAG +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLMREKD*YICRHQ
Trigger: CTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCAT...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTTTTTGGATTTCTAAATaGGAGTCAGAGTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPFWISK*ESESSK
Trigger: CTTGGATGACTCTGACTCTCATTTAGAAATCCAAAA...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTATTTTGGATTTCTAAATaGGAGTCAGAGTCATCCAAG +
Preference number: 4 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVFWISK*ESESSK
Trigger: CTTGGATGACTCTGACTCTCATTTAGAAATCCAAAA...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACACACCTCTCTTTCTTCTaGGCTTCTGGAGAAGCGAAA +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTHLSFF*ASGEAK
Trigger: TTTCGCTTCTCCAGAAGCTCAGAAGAAAGAGAGGTG...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCATTAGAATTCGGAGAATTACGCTaGTTCACCTCTCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: GSFETKYSLLSLNPGPLEFGELR*FTSQPG
Trigger: CCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCGAA...TTCTAATGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp ATCCATTCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGACAGTTGCTCAAAAGGTaGAGGAGAGGCTCTCACTTC +
Preference number: 4 (lower is better)
Translates to: IHSILAHKAQMRLPKTPRQLLKR*RRGSHF
Trigger: GAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTG...TCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGAATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACAGCTCAGGACTTGAGATaGCTCAGTTGCTCAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTAQDLR*LSCSKG
Trigger: ACCTTTTGAGCAACTGAGTCATCTCAAGTCCTGAGC...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTGCAGAGCTCAGGACTTaGGATGACTCAGTTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIAELRT*DDSVAQ
Trigger: TTGAGCAACTGAGTCATCTCAAGTCCTGAGCTCTGC...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTAGCCATCCAAAAAGCTaGATCAAAAACAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: CNMAELPSRASENYADSPSHPKS*IKNNAN
Trigger: ATTGGCATTGTTTTTGATTCAGCTTTTTGGATGGCT...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACAGCACTCTTTCTTCTTTaGTGCCTACCCTGGAGCATT +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTALFLL*CLPWSI
Trigger: AATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGC...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTAAAGCGATCCAAAATTaGCTAAAGGCTGCCGTCGGT +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIKAIQN*LKAAVG
Trigger: ACCGACGGCAGCCTTTAGTCAATTTTGGATCGCTTT...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR TCA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACATTCCCACAGCACAGTaGAAACAATTAGCCATCCAA +
Preference number: 4 (lower is better)
Translates to: RVIQGREEDDFTGCKKINIPTAQ*KQLAIQ
Trigger: TTGGATGGCTAATTGTTTTCACTGTGCTGTGGGAAT...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTGCATAGACAATGTAACATCAAGGTTTCAGAGATaGCAAACCGTGTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DWYICRHQACLFCIDNVTSRFQR*QTVLEK
Trigger: CTTCTCCAACACGGTTTGGCATCTCTGAAACCTTGA...TGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp ATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTGGGGGCAAGATGGAAATaGCAGATAGGAAATATTAAA +
Preference number: 4 (lower is better)
Translates to: ISMAVEPMRPAAEVLLPVGARWK*QIGNIK
Trigger: TTTAATATTTCCTATCTGGCATTTCCATCTTGCCCC...CACAGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGCTGAATCAAAAACAATaGCAATCAGCTTTCACGCCC +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKLNQKQ*QSAFTP
Trigger: GGGCGTGAAAGCTGATTGGCATTGTTTTTGATTCAG...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTTCTCTGGAGGTGTTTTaGACACTCCCTGTAGAGTTG +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGISLEVF*TLPVEL
Trigger: CAACTCTACAGGGAGTGTCCAAAACACCTCCAGAGA...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAAAAAAGTTTCCCAGTTaGAAGTCTGTTTTTAGAACC +
Preference number: 4 (lower is better)
Translates to: PGLLILHRQCNMAELPSRKKFPS*KSVFRT
Trigger: GGTTCTAAAAACAGACTTCCAACTGGGAAACTTTTT...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGGGAGGACGACTTCACTaGTTGCAAGAAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKGGRLH*LQENKP
Trigger: AGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCC...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTTGCAGACACCAGGCCTaGTTATTCTGCATAGACAAT +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGICRHQA*LFCIDN
Trigger: ATTGTCTATGCAGAATAAGCAGGCCTGGTGTCTGCA...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTTTTCTTCTGAGCTTCTaGAGAAGCGAAATGAACGAG +
Preference number: 4 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIFLLSF*RSEMNE
Trigger: CTCGTTCATTTCGCTTCTCCAGAAGCTCAGAAGAAA...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR GCA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGCTCACAAGGCTCAAATaGGCCTTCCAAAAACACCTA +
Preference number: 4 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTLTRLK*AFQKHL
Trigger: TAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAG...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGAAAAAGTTTCCCAGTTaGAAGTCTGTTTTTAGAACC +
Preference number: 4 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKKKFPS*KSVFRT
Trigger: GGTTCTAAAAACAGACTTCCAACTGGGAAACTTTTT...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CCA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTGTACACACCCAGAAATaGGAAGAATTAGAATTAGAA +
Preference number: 4 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLVHTQK*EELELE
Trigger: TTCTAATTCTAATTCTTCCCATTTCTGGGTGTGTAC...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS GCA 90 bp GCGACCACTCCGGCCTCCGTGGCGCCCGCCCTCCGGAACGAGCCCTaGGGCCCGCAGGCCGGAGAGCGACAGGGGCGGGGCCTGCGCCAA +
Preference number: 5 (lower is better)
Translates to: ATTPASVAPALRNEP*GPQAGERQGRGLRQ
Trigger: TTGGCGCAGGCCCCGCCCCTGTCGCTCTCCGGCCTGCGGGCCGCAGGGCTCGTTCCGGAGGGCGGGCGCCACGGAGGCCGGAGTGGTCGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS TCA 90 bp TGCGCTTGCGGGGACACCCTTCCGACGTGCTGCTCCAGTTGTGCTTaGCCTTGCCCCGCTCGGACGCCATGGGCACCTTTCCCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: CACGDTLPTCCSSCA*PCPARTPWAPFPLL
Trigger: AAGAAGAGGGAAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAAGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CCA 90 bp AGGCGCCTTGGAGTCGGGACGGTACGCCTTAGGAAGCTCGTCCATTaGTCAGAAGCCAGATGGGGCGGAGCCACTCACGTGGGCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RRLGVGTVRLRKLVH*SEARWGGATHVGSN
Trigger: GTTCGAGCCCACGTGAGTGGCTCCGCCCCATCTGGCTTCTGACCAATGGACGAGCTTCCTAAGGCGTACCGTCCCGACTCCAAGGCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS TCA 90 bp GGAACCTGCAGGTGCAGGGAGAGTCCTAGTCATGGGGGCTCTGGGTaGGCAGGGTCCCACGCTTCCTTGGACTACCCTCTACAGGGTAGG +
Preference number: 5 (lower is better)
Translates to: GTCRCRESPSHGGSG*AGSHASLDYPLQGR
Trigger: CCTACCCTGTAGAGGGTAGTCCAAGGAAGCGTGGGACCCTGCTCACCCAGAGCCCCCATGACTAGGACTCTCCCTGCACCTGCAGGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496355.1
CDS CCA 90 bp GGGACGGTACGCCTTAGGAAGCTCGTCCATTGGTCAGAAGCCAGATaGGGCGGAGCCACTCACGTGGGCTCGAACAGCGGGAAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: GTVRLRKLVHWSEAR*GGATHVGSNSGKLR
Trigger: CCTCAACTTCCCGCTGTTCGAGCCCACGTGAGTGGCTCCGCCCCATCTGGCTTCTGACCAATGGACGAGCTTCCTAAGGCGTACCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS GCA 90 bp CACTCACGTGGGCTCGAACAGCGGGAAGTTGAGGCCAGCCAGATGTaGAGGCAGGTGGTGTCCGCTGACGCGCCTCACTTAACGCTGTTT +
Preference number: 5 (lower is better)
Translates to: HSRGLEQREVEASQM*RQVVSADAPHLTLF
Trigger: AAACAGCGTTAAGTGAGGCGCGTCAGCGGACACCACCTGCCTGCACATCTGGCTGGCCTCAACTTCCCGCTGTTCGAGCCCACGTGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CAA 90 bp CAAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGTCAAAGCCAGGCGCCTaGGAGTCGGGACGGTACGCC +
Preference number: 5 (lower is better)
Translates to: QDHRRGTPGDLSTSLQIRSKPGA*ESGRYA
Trigger: GGCGTACCGTCCCGACTCCAAGGCGCCTGGCTTTGA...CCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CAA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGCTGCTCCAGTTGTGCTaGACCTTGCCCCGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVLLQLC*TLPRSD
Trigger: GTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAG...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGACCTGGGCTGCATCGTaGCTGCTGCTGCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVTWAAS*LLLPVE
Trigger: CTCCACAGGCAGCAGCAGCAACGATGCAGCCCAGGT...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CACCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAAACGGAAGGCGCCCATaGCTCGACCCGGCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: HQACLFCIDNVTWLSCPANGRRP*LDPARG
Trigger: GCCCCTTGCCGGGTCGAGCAATGGGCGCCTTCCGTT...TGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CAA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGCAGGAAGCCTTCACTTaGCCCAGCGCTACTTCGGAG +
Preference number: 5 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQQEAFT*PSATSE
Trigger: CTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCTG...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGCTGCTGCGCTTGGTTTaGCCCGAGTGGCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGLLRLV*PEWQPL
Trigger: GAGAGGCTGCCACTCGGGCAAAACCAAGCGCAGCAG...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CGGAGAATTACGCTGATTCACCTCTCAACCTGGGCGGGGTACACAAAGGACTGTACCTGGGCTGCATCGTaGCTGCTGCTGCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: RRITLIHLSTWAGYTKDCTWAAS*LLLPVE
Trigger: CTCCACAGGCAGCAGCAGCAACGATGCAGCCCAGGT...ACAGTCCTTTGTGTACCCCGCCCAGGTTGAGAGGTGAATCAGCGTAATTCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCCAGTTGTGCTTGACCTaGCCCCGCTCGGACGCCATG +
Preference number: 5 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSQLCLT*PRSDAM
Trigger: CATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTG...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGGATGCTCTGCTGCGCTaGGTTTTGCCCGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRDALLR*VLPEWQ
Trigger: CTGCCACTCGGGCAAAACCAAGCGCAGCAGAGCATC...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCGAGGAAGTACCTCCTTaGGGGTCCTCTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSEEVPP*GSSSPR
Trigger: TCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCTC...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCAACCTTGTGCTTTTCCTaGGCAGGTGGATGGCACAGG +
Preference number: 5 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSTLCFS*AGGWHR
Trigger: CCTGTGCCATCCACCTGCCAAGGAAAAGCACAAGGT...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS TCA 90 bp CGCGCCTCACTTAACGCTGTTTTCCTCAGCGCCGGCCGCTGTACCTaGAGCTTTCAGACCTGGATTTCTCATCGAGCCAAAGCAAACCGT +
Preference number: 5 (lower is better)
Translates to: RASLNAVFLSAGRCT*SFQTWISHRAKANR
Trigger: ACGGTTTGCTTTGGCTCGATGAGAAATCCAGGTCTGAAAGCTTCAGGTACAGCGGCCGGCGCTGAGGAAAACAGCGTTAAGTGAGGCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CAA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGCAAAGCGATCCAAAATaGACTAAAGGCTGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQQSDPK*TKGCRR
Trigger: CCGACGGCAGCCTTTAGTCAATTTTGGATCGCTTTG...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GAGTTCCAGGCCAGTGACTTGTGTACCAGGGGCAAGATGGAAATGCCAGATAGGTCTTCCAAAGAGGCGTaGGCAGGACGCAGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: EFQASDLCTRGKMEMPDRSSKEA*AGRRGD
Trigger: ATCCCCTCTGCGTCCTGCCAACGCCTCTTTGGAAGA...CCTATCTGGCATTTCCATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGGTCTCTGGAGGTGTTTaGGACACTCCCTGTAGAGTT +
Preference number: 5 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQVSGGV*DTPCRV
Trigger: AACTCTACAGGGAGTGTCCAAAACACCTCCAGAGAC...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCCGCACTCTTTCTTCTTaGCTGCCTACCCTGGAGCAT +
Preference number: 5 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSRTLSS*LPTLEH
Trigger: ATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGCG...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCACGCACTCTTTCTTCTTaGCTGCCTACCCTGGAGCAT +
Preference number: 5 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSRTLSS*LPTLEH
Trigger: ATGCTCCAGGGTAGGCAGCAAAGAAGAAAGAGTGCG...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TTCCCCAAGAAAGCCTCTTCCCGGAGTCCCCCAGTCTGTCCTGGATCTCCATCAGTGGATGGCACAGGCTaGGAGACTTCCATGTCATCT +
Preference number: 5 (lower is better)
Translates to: FPKKASSRSPPVCPGSPSVDGTG*ETSMSS
Trigger: AGATGACATGGAAGTCTCCAAGCCTGTGCCATCCAC...TGATGGAGATCCAGGACAGACTGGGGGACTCCGGGAAGAGGCTTTCTTGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS GCA 90 bp TCTGAGATCAGGAAGCCTTCACTTTGCCCAGCGCTACTTCGGAGATaGCTAAGCGCTTCCGGGGCTACGAAGCGCTTTGATCAGTTTGCA +
Preference number: 5 (lower is better)
Translates to: SEIRKPSLCPALLRR*LSASGATKRFDQFA
Trigger: TGCAAACTGATCAAAGCGCTTCGTAGCCCCGGAAGCGCTTAGGCATCTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCTGATCTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGAATTACGCTGATTCACCTTCGAACAGCGGGAAGTaGAGGCCAGCCAGATGTGCA +
Preference number: 5 (lower is better)
Translates to: CNMAELPSRASENYADSPSNSGK*RPARCA
Trigger: TGCACATCTGGCTGGCCTCAACTTCCCGCTGTTCGA...AGGTGAATCAGCGTAATTCTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS-3UTR CAA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGACAGGAAGCCTTCACTTaGCCCAGCGCTACTTCGGAG +
Preference number: 5 (lower is better)
Translates to: PGLLILHRQCNMAELPSRQEAFT*PSATSE
Trigger: CTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCTG...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCTCTAGGGCCTGTAACGAGTATACCTTTACAAGGCACCAGCAGGCGGCAGAGCTGTCTCTCAAATACCTaGTGCTGTTCTGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: PLGPVTSIPLQGTSRRQSCLSNT*CCSGTG
Trigger: GCCTGTCCCAGAACAGCACAAGGTATTTGAGAGACA...GCTCTGCCGCCTGCTGGTGCCTTGTAAAGGTATACTCGTTACAGGCCCTAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTACCAGGGACCTTGTGCTTTTCCTaGGCAGGTGGATGGCACAGG +
Preference number: 5 (lower is better)
Translates to: KTDSESRLSSRPVTCVPGTLCFS*AGGWHR
Trigger: CCTGTGCCATCCACCTGCCAAGGAAAAGCACAAGGT...CCCTGGTACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACCTGCTCCAGTTGTGCTaGACCTTGCCCCGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: RVIQGREEDDFTGCKKINLLQLC*TLPRSD
Trigger: GTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAG...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCCTGCTGCGCTTGGTTTaGCCCGAGTGGCAGCCTCTC +
Preference number: 5 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVLLRLV*PEWQPL
Trigger: GAGAGGCTGCCACTCGGGCAAAACCAAGCGCAGCAG...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GGTGAAGGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCAGATGCTCTGCTGCGCTaGGTTTTGCCCGAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: GEGSFETKYSLLSLNPGPDALLR*VLPEWQ
Trigger: CTGCCACTCGGGCAAAACCAAGCGCAGCAGAGCATC...TGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AGGAGATGCGGGAGAAGGACTGGTACATTTGCAGACACCAGGCCTGCTTATTCTAGCCTTATGACCCGCTaGGAGGAAAACATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: RRCGRRTGTFADTRPAYSSLMTR*EENILS
Trigger: GGACAGGATGTTTTCCTCCAAGCGGGTCATAAGGCT...AGAATAAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTCTCCCGCATCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AAGACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGGGACGACTTCACTGGTaGCAAGAAAATAAACCTCCG +
Preference number: 5 (lower is better)
Translates to: KTTDEGLQVIYPPHCRSGGRLHW*QENKPP
Trigger: CGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCC...CCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCGAAGGACTGGTACATTaGCAGACACCAGGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSEGLVH*QTPGLL
Trigger: AAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTC...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCAGGCCTGCTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAAGATGCCAAACCGTGTaGGAGAAGTCAAAGCGATCC +
Preference number: 5 (lower is better)
Translates to: PGLLILHRQCNMAELPSRRCQTV*EKSKRS
Trigger: GGATCGCTTTGACTTCTCCAACACGGTTTGGCATCT...TCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAGCAGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TCCATTTTAGCTCACAAGGCTCAAATGCGCCTTCCAAAAACACCTAGAGGAATTCAGTTGTGCTTGACCTaGCCCCGCTCGGACGCCATG +
Preference number: 5 (lower is better)
Translates to: SILAHKAQMRLPKTPRGIQLCLT*PRSDAM
Trigger: CATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTG...AATTCCTCTAGGTGTTTTTGGAAGGCGCATTTGAGCCTTGTGAGCTAAAATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGTCTCTGGAGGTGTTTaGGACACTCCCTGTAGAGTT +
Preference number: 5 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPVSGGV*DTPCRV
Trigger: AACTCTACAGGGAGTGTCCAAAACACCTCCAGAGAC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CTTATTCTGCATAGACAATGTAACATGGCTGAGCTGCCCAGCAGAGCTTCGGAGGAAGGACTGGTACATTaGCAGACACCAGGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LILHRQCNMAELPSRASEEGLVH*QTPGLL
Trigger: AAGCAGGCCTGGTGTCTGCAAATGTACCAGTCCTTC...CTCCGAAGCTCTGCTGGGCAGCTCAGCCATGTTACATTGTCTATGCAGAATAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCTTCCAGGCCAGTGACTaGTGTACCAGGGGCAAGATG +
Preference number: 5 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSFQASD*CTRGKM
Trigger: CATCTTGCCCCTGGTACACAAGTCACTGGCCTGGAA...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS TCA 90 bp GCTACTTCGGAGATGCCTAAGCGCTTCCGGGGCTACGAAGCGCTTTaGTCAGTTTGCAATATAAAGCCCTTTAGAACTGTCAAGCGCTTC +
Preference number: 5 (lower is better)
Translates to: ATSEMPKRFRGYEAL*SVCNIKPFRTVKRF
Trigger: GAAGCGCTTGACAGTTCTAAAGGGCTTTATATTGCAAACTGATCAAAGCGCTTCGTAGCCCCGGAAGCGCTTAGGCATCTCCGAAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AGTTCACTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTTCTTCCAAAGAGGCGTaGGCAGGACGCAGAGGGGAT +
Preference number: 5 (lower is better)
Translates to: SSLGDYKHFDMLGSPPSLSSKEA*AGRRGD
Trigger: ATCCCCTCTGCGTCCTGCCAACGCCTCTTTGGAAGA...AAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAGTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCAGCAGCTGAAGTCCTTCTGCCTGTGCCGACGCTGGAGTTGACACCAGAACAGCTGCAAATTCAGAGTTaGTGGAGTTATGAGAACTAT +
Preference number: 5 (lower is better)
Translates to: PAAEVLLPVPTLELTPEQLQIQS*WSYENY
Trigger: ATAGTTCTCATAACTCCACAAACTCTGAATTTGCAG...CTGTTCTGGTGTCAACTCCAGCGTCGGCACAGGCAGAAGGACTTCAGCTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TCCGTGAAGACGGACAGTGAATCAAGGCTGAGTTCCAGGCCAGTGACTTGTGTAGGACGACTTCACTGGTaGCAAGAAAATAAACCTCCG +
Preference number: 5 (lower is better)
Translates to: SVKTDSESRLSSRPVTCVGRLHW*QENKPP
Trigger: CGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCC...TACACAAGTCACTGGCCTGGAACTCAGCCTTGATTCACTGTCCGTCTTCACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACGAGGAAGTACCTCCTTaGGGGTCCTCTTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: RVIQGREEDDFTGCKKINEEVPP*GSSSPR
Trigger: TCTTGGGGAAGAGGACCCCAAAGGAGGTACTTCCTC...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp TTAGGATTCCATAAGGGATGTATTTTACAATTTAAGCCTCCAAGACCACAGACGGACGTGCTGCTCCAGTaGTGCTTGACCTTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: LGFHKGCILQFKPPRPQTDVLLQ*CLTLPR
Trigger: GCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTC...CGTCTGTGGTCTTGGAGGCTTAAATTGTAAAATACATCCCTTATGGAATCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GACCACAGACGAGGGACTCCAGGTGATCTATCCACCTCACTGCAGATCAGGGTGCTGCAAATTCAGAGTTaGTGGAGTTATGAGAACTAT +
Preference number: 5 (lower is better)
Translates to: DHRRGTPGDLSTSLQIRVLQIQS*WSYENY
Trigger: ATAGTTCTCATAACTCCACAAACTCTGAATTTGCAG...CACCCTGATCTGCAGTGAGGTGGATAGATCACCTGGAGTCCCTCGTCTGTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCAGCCTTATGACCCGCTaGGAGGAAAACATCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVSLMTR*EENILS
Trigger: GGACAGGATGTTTTCCTCCAAGCGGGTCATAAGGCT...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GGTGAAGGATCCTTTGAAACAAAGTACAGTCTCCTCTCACTTAACCCTGGACCAGTGGATGGCACAGGCTaGGAGACTTCCATGTCATCT +
Preference number: 5 (lower is better)
Translates to: GEGSFETKYSLLSLNPGPVDGTG*ETSMSS
Trigger: AGATGACATGGAAGTCTCCAAGCCTGTGCCATCCAC...TGGTCCAGGGTTAAGTGAGAGGAGACTGTACTTTGTTTCAAAGGATCCTTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GCAGGTAGTTTCCGCCGCAAACTGAACCTTATCAGCTTAACACACCCACACAGCGGGCTACGAAGCGCTTaGATCAGTTTGCAATATAAA +
Preference number: 5 (lower is better)
Translates to: AGSFRRKLNLISLTHPHSGLRSA*ISLQYK
Trigger: TTTATATTGCAAACTGATCAAAGCGCTTCGTAGCCC...GCTGTGTGGGTGTGTTAAGCTGATAAGGTTCAGTTTGCGGCGGAAACTACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CCCATATCAATGGCAGTGGAACCAATGAGACCAGCAGCTGAAGTCCTTCTGCCTGGGCTACGAAGCGCTTaGATCAGTTTGCAATATAAA +
Preference number: 5 (lower is better)
Translates to: PISMAVEPMRPAAEVLLPGLRSA*ISLQYK
Trigger: TTTATATTGCAAACTGATCAAAGCGCTTCGTAGCCC...AGGCAGAAGGACTTCAGCTGCTGGTCTCATTGGTTCCACTGCCATTGATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp AGAGTTATCCAGGGAAGGGAGGAGGACGACTTCACTGGTTGCAAGAAAATAAACCAAAGCGATCCAAAATaGACTAAAGGCTGCCGTCGG +
Preference number: 5 (lower is better)
Translates to: RVIQGREEDDFTGCKKINQSDPK*TKGCRR
Trigger: CCGACGGCAGCCTTTAGTCAATTTTGGATCGCTTTG...GTTTATTTTCTTGCAACCAGTGAAGTCGTCCTCCTCCCTTCCCTGGATAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GACTCAGTTGCTCAAAAGGTGAAGGAGAGGCTCTCACTTCTAAAACGCAGAAAGAGATGCCAAACCGTGTaGGAGAAGTCAAAGCGATCC +
Preference number: 5 (lower is better)
Translates to: DSVAQKVKERLSLLKRRKRCQTV*EKSKRS
Trigger: GGATCGCTTTGACTTCTCCAACACGGTTTGGCATCT...CTTTCTGCGTTTTAGAAGTGAGAGCCTCTCCTTCACCTTTTGAGCAACTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp GAGGACGACTTCACTGGTTGCAAGAAAATAAACCTCCGAGATAGGTGTCCAGTTTGTCTCTCAAATACCTaGTGCTGTTCTGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: EDDFTGCKKINLRDRCPVCLSNT*CCSGTG
Trigger: GCCTGTCCCAGAACAGCACAAGGTATTTGAGAGACA...AACTGGACACCTATCTCGGAGGTTTATTTTCTTGCAACCAGTGAAGTCGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CAGAATGTGAGTTTTACGACCTTTTCTAGGAGACTCCCGAGGACTGTACCTTCTTGTCTCTCAAATACCTaGTGCTGTTCTGGGACAGGC +
Preference number: 5 (lower is better)
Translates to: QNVSFTTFSRRLPRTVPSCLSNT*CCSGTG
Trigger: GCCTGTCCCAGAACAGCACAAGGTATTTGAGAGACA...AGAAGGTACAGTCCTCGGGAGTCTCCTAGAAAAGGTCGTAAAACTCACATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426850.1
CDS-3UTR CAA 90 bp CTTGGTGACTATAAACACTTTGATATGCTCGGCAGTCCCCCAAGTCTTCCAAGCGTGACTATAAACACTTaGATATGCTCGGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: LGDYKHFDMLGSPPSLPSVTINT*ICSAVP
Trigger: GGGGACTGCCGAGCATATCAAAGTGTTTATAGTCAC...GCTTGGAAGACTTGGGGGACTGCCGAGCATATCAAAGTGTTTATAGTCACCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS-3UTR CAA 90 bp CTATCCACCTCACTGCAGATCAGGGTGAAGGATCCTTTGAAACAAAGTACAGTCGTGACTATAAACACTTaGATATGCTCGGCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: LSTSLQIRVKDPLKQSTVVTINT*ICSAVP
Trigger: GGGGACTGCCGAGCATATCAAAGTGTTTATAGTCAC...GACTGTACTTTGTTTCAAAGGATCCTTCACCCTGATCTGCAGTGAGGTGGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CAA 72 bp CGCTTGCGGGGACACCCTTCCGACGTGCTGCTCCAGTaGTGCTTGACCTTGCCCCGCTCGGACGCCATGGGC +
Preference number: 6 (lower is better)
Translates to: RLRGHPSDVLLQ*CLTLPRSDAMG
Trigger: GCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS GCA 72 bp TTGCGGGGACACCCTTCCGACGTGCTGCTCCAGTTGTaGTTGACCTTGCCCCGCTCGGACGCCATGGGCACC +
Preference number: 6 (lower is better)
Translates to: LRGHPSDVLLQL*LTLPRSDAMGT
Trigger: GGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CAA 90 bp GGCGGGACTCCGAGCAAGACGCAGCCCGCCTCAAAGCCAGGCGCCTaGGAGTCGGGACGGTACGCCTTAGGAAGCTCGTCCATTGGTCAG +
Preference number: 6 (lower is better)
Translates to: GGTPSKTQPASKPGA*ESGRYALGSSSIGQ
Trigger: CTGACCAATGGACGAGCTTCCTAAGGCGTACCGTCCCGACTCCAAGGCGCCTGGCTTTGAGGCGGGCTGCGTCTTGCTCGGAGTCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS TCA 72 bp GGGGACACCCTTCCGACGTGCTGCTCCAGTTGTGCTTaGCCTTGCCCCGCTCGGACGCCATGGGCACCTTTC +
Preference number: 6 (lower is better)
Translates to: GDTLPTCCSSCA*PCPARTPWAPF
Trigger: GAAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CAA 72 bp CGGGGACACCCTTCCGACGTGCTGCTCCAGTTGTGCTaGACCTTGCCCCGCTCGGACGCCATGGGCACCTTT +
Preference number: 6 (lower is better)
Translates to: RGHPSDVLLQLC*TLPRSDAMGTF
Trigger: AAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CAA 90 bp CTGCGCTTGCGGGGACACCCTTCCGACGTGCTGCTCCAGTTGTGCTaGACCTTGCCCCGCTCGGACGCCATGGGCACCTTTCCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: LRLRGHPSDVLLQLC*TLPRSDAMGTFPSS
Trigger: AGAAGAGGGAAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAAGCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS GCA 72 bp GGGCTCGAACAGCGGGAAGTTGAGGCCAGCCAGATGTaGAGGCAGGTGGTGTCCGCTGACGCGCCTCACTTA +
Preference number: 6 (lower is better)
Translates to: GLEQREVEASQM*RQVVSADAPHL
Trigger: TAAGTGAGGCGCGTCAGCGGACACCACCTGCCTGCACATCTGGCTGGCCTCAACTTCCCGCTGTTCGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS CCA 72 bp CGCCTTAGGAAGCTCGTCCATTGGTCAGAAGCCAGATaGGGCGGAGCCACTCACGTGGGCTCGAACAGCGGG +
Preference number: 6 (lower is better)
Translates to: RLRKLVHWSEAR*GGATHVGSNSG
Trigger: CCCGCTGTTCGAGCCCACGTGAGTGGCTCCGCCCCATCTGGCTTCTGACCAATGGACGAGCTTCCTAAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS CAA 72 bp CACCCTTCCGACGTGCTGCTCCAGTTGTGCTTGACCTaGCCCCGCTCGGACGCCATGGGCACCTTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: HPSDVLLQLCLT*PRSDAMGTFPS
Trigger: AGAGGGAAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CAA 90 bp TTGCGGGGACACCCTTCCGACGTGCTGCTCCAGTTGTGCTTGACCTaGCCCCGCTCGGACGCCATGGGCACCTTTCCCTCTTCTTTCCAC +
Preference number: 6 (lower is better)
Translates to: LRGHPSDVLLQLCLT*PRSDAMGTFPSSFH
Trigger: GTGGAAAGAAGAGGGAAAGGTGCCCATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS CCA 72 bp GGAGTCGGGACGGTACGCCTTAGGAAGCTCGTCCATTaGTCAGAAGCCAGATGGGGCGGAGCCACTCACGTG +
Preference number: 6 (lower is better)
Translates to: GVGTVRLRKLVH*SEARWGGATHV
Trigger: CACGTGAGTGGCTCCGCCCCATCTGGCTTCTGACCAATGGACGAGCTTCCTAAGGCGTACCGTCCCGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287652.8
CDS TCA 72 bp AGGTGCAGGGAGAGTCCTAGTCATGGGGGCTCTGGGTaGGCAGGGTCCCACGCTTCCTTGGACTACCCTCTA +
Preference number: 6 (lower is better)
Translates to: RCRESPSHGGSG*AGSHASLDYPL
Trigger: TAGAGGGTAGTCCAAGGAAGCGTGGGACCCTGCTCACCCAGAGCCCCCATGACTAGGACTCTCCCTGCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496355.1
CDS GCA 72 bp AGGAAGCCTTCACTTTGCCCAGCGCTACTTCGGAGATaGCTAAGCGCTTCCGGGGCTACGAAGCGCTTTGAT +
Preference number: 6 (lower is better)
Translates to: RKPSLCPALLRR*LSASGATKRFD
Trigger: ATCAAAGCGCTTCGTAGCCCCGGAAGCGCTTAGGCATCTCCGAAGTAGCGCTGGGCAAAGTGAAGGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS TCA 72 bp GAGATGCCTAAGCGCTTCCGGGGCTACGAAGCGCTTTaGTCAGTTTGCAATATAAAGCCCTTTAGAACTGTC +
Preference number: 6 (lower is better)
Translates to: EMPKRFRGYEAL*SVCNIKPFRTV
Trigger: GACAGTTCTAAAGGGCTTTATATTGCAAACTGATCAAAGCGCTTCGTAGCCCCGGAAGCGCTTAGGCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287652.8
ENST00000448281.7
CDS TCA 72 bp CCTGGATTTCTCATCGAGCCAAAGCAAACCGTGTACTaGGCATTATCACCCCACTTTATAGAGCAGAAAACT +
Preference number: 6 (lower is better)
Translates to: PGFLIEPKQTVY*ALSPHFIEQKT
Trigger: AGTTTTCTGCTCTATAAAGTGGGGTGATAATGCTCAGTACACGGTTTGCTTTGGCTCGATGAGAAATCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287652.8