RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAT (Homo sapiens)

Ensembl gene IDs: ENSG00000198650

Ensembl transcript IDs: ENST00000355962.5, ENST00000564007.2, ENST00000566010.1, ENST00000566094.5

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGACACTTCTCATTCACTGGGTCAAGCCAGAGCCATCAACTTTGTaGCCTAGTGAGTGGTTAGTGGATATAGGCAAGCGTAGTAACTTG +
Preference number: 1 (lower is better)
Translates to: RTLLIHWVKPEPSTL*PSEWLVDIGKRSNL
Trigger: CAAGTTACTACGCTTGCCTATATCCACTAACCACTCACTAGGTCACAAAGTTGATGGCTCTGGCTTGACCCAGTGAATGAGAAGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR CCA 90 bp GACCAGCAAATGATAACTGATTCCCTCAGGGGAGAAGAAACTGGGTaGCTGAAGGACAGGAATGAGAAAGAAGGACAGTTGCGTTTGTTT +
Preference number: 1 (lower is better)
Translates to: DQQMITDSLRGEETG*LKDRNEKEGQLRLF
Trigger: AAACAAACGCAACTGTCCTTCTTTCTCATTCCTGTCCTTCAGCCACCCAGTTTCTTCTCCCCTGAGGGAATCAGTTATCATTTGCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGGCCACCTGAGTCCCTaGGGAGCCGCAAGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQGHLSP*GAARPS
Trigger: ACTAGGCCTTGCGGCTCCTCAGGGACTCAGGTGGCC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCTTCTTTCTTAGAGTCTaGGGAAATGGTTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRFFLRV*GNGWGH
Trigger: GTGCCCCCAACCATTTCCTCAGACTCTAAGAAAGAA...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGAGCAAGGGAGAATCTaGGATGTGAATGAGGAGGAT +
Preference number: 2 (lower is better)
Translates to: RRALTLRKPDAAGRGGSREQGRI*DVNEED
Trigger: ATCCTCCTCATTCACATCGCAGATTCTCCCTTGCTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCAAAGTGAGGTATACCTaGAGTGAGGCAATAAGAGAG +
Preference number: 2 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRKVRYT*SEAIRE
Trigger: CTCTCTTATTGCCTCACTTCAGGTATACCTCACTTT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATTGACATGGTGCATTTaGGGCCCCTCTCCCAGTAGG +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQLTWCI*GPSPSR
Trigger: CCTACTGGGAGAGGGGCCTCAAATGCACCATGTCAA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACCAGCCTTCCCTAGATaGGACACATCCTCAGGAGAA +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQPAFPR*DTSSGE
Trigger: TTCTCCTGAGGATGTGTCCCATCTAGGGAAGGCTGG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAAATCTGCGATGTGAATaGGGAGGATCTGAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQNLRCE*GGSECG
Trigger: CCCACACTCAGATCCTCCTCATTCACATCGCAGATT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGGCGGGCAGATTGCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVGGQIA*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGCAATCTGCCCGCC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGGGTGTGGTTGTACTTaGGGAAAAGCAGGAACAATC +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQGCGCT*GKAGTI
Trigger: GATTGTTCCTGCTTTTCCCCAAGTACAACCACACCC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAAAGCAGGAACAATCTTaGACCCTTGACATGGTGCAT +
Preference number: 2 (lower is better)
Translates to: TRGRQINELVSHSSSAEQKQEQS*TLDMVH
Trigger: ATGCACCATGTCAAGGGTTCAAGATTGTTCCTGCTT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGTTGAGCTTCAGACCTaGCTGGAGAGAGCGTGTTCT +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVVELQT*LERACS
Trigger: AGAACACGCTCTCTCCAGGCAGGTCTGAAGCTCAAC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR CAA 90 bp ACTGGGTGGCTGAAGGACAGGAATGAGAAAGAAGGACAGTTGCGTTaGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCTTTTC +
Preference number: 2 (lower is better)
Translates to: TGWLKDRNEKEGQLR*FVSFEIVQCVCVLF
Trigger: GAAAAGAACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTCTTTCTCATTCCTGTCCTTCAGCCACCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTACAATCTTGAACCCTTaGCATGGTGCATTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVTILNP*HGAFEA
Trigger: GGCCTCAAATGCACCATGTCAAGGGTTCAAGATTGT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGCTCTAGTACAGGCGTaGTCTCACTTTAAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVALVQA*SHFKKA
Trigger: GGCTTTCTTAAAGTGAGAGCACGCCTGTACTAGAGC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGAGGTATACCTGAAGTaGGGCAATAAGAGAGTTGAG +
Preference number: 2 (lower is better)
Translates to: KVENVKTKARGYNLLPLGEVYLK*GNKRVE
Trigger: CTCAACTCTCTTATTGCCTCACTTCAGGTATACCTC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR CCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCTTCCTGTTTATTTCTaGTTAGAGATCTTTGGGGGC +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLPVYF*LEIFGG
Trigger: GCCCCCAAAGATCTCTAACCAGAAATAAACAGGAAG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGAAAATTTCCCTTGGTaGGAAATCTCTAGACTAGTT +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVENFPW*EISRLV
Trigger: AACTAGTCTAGAGATTTCTCACCAAGGGAAATTTTC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTTAAAAGGTAAATTTTaGTGTGAGCTCACTGAACTC +
Preference number: 2 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLKGKF*CELTEL
Trigger: GAGTTCAGTGAGCTCACAGCAAAATTTACCTTTTAA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR TCA 72 bp TCTGGCCCTTACACAGTAGTATTTCTGGAAGGTCTCTaGTTCCTGCTTGCTCTAGTACAGGCGTGCTCTCAC +
Preference number: 3 (lower is better)
Translates to: SGPYTVVFLEGL*FLLALVQACSH
Trigger: GTGAGAGCACGCCTGTACTAGAGCAAGCAGGAATCAGAGACCTTCCAGAAATACTACTGTGTAAGGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR TCA 72 bp GACCTGCCTGGAGAGAGCGTGTTCTTTCTTAGAGTCTaGGGAAATGGTTGGGGGCACAAATTCTCTCAATCT +
Preference number: 3 (lower is better)
Translates to: DLPGESVFFLRV*GNGWGHKFSQS
Trigger: AGATTGAGAGAATTTGTGCCCCCAACCATTTCCTCAGACTCTAAGAAAGAACACGCTCTCTCCAGGCAGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR TCA 72 bp CTCATTCACTGGGTCAAGCCAGAGCCATCAACTTTGTaGCCTAGTGAGTGGTTAGTGGATATAGGCAAGCGT +
Preference number: 3 (lower is better)
Translates to: LIHWVKPEPSTL*PSEWLVDIGKR
Trigger: ACGCTTGCCTATATCCACTAACCACTCACTAGGTCACAAAGTTGATGGCTCTGGCTTGACCCAGTGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCCCAGAAGGGCGGACTaGCCGGAGTCCAGGGATGGC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRPRRAD*PESRDG
Trigger: GCCATCCCTGGACTCCGGCCAGTCCGCCCTTCTGGG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGCCGGAGTCCAGGGATaGCAGCCAACGCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRAGVQG*QPTPHN
Trigger: GTTATGGGGCGTTGGCTGCCATCCCTGGACTCCGGC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGTCCCAAAATGCGCTaGCTCAGCTTCACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGPKMR*LSFTSP
Trigger: TGGGCTGGTGAAGCTGAGTCAGCGCATTTTGGGACC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCACTCCTGGATCCGGCTaGACGCCTCCAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRTPGSG*TPPASS
Trigger: TGATGATGCTGGAGGCGTGCAGCCGGATCCAGGAGT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCTTTCTTGGCCATGTCTaGGGGCCTCACAGACCACCT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRFLGHV*GPHRPP
Trigger: AGGTGGTCTGTGAGGCCCTCAGACATGGCCAAGAAA...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCCACCAACGTTGACATaGACGTCCAGAATTGAGGGG +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRPPTLT*TSRIEG
Trigger: CCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGAACCAGGATGTTTTaGCCTGGGTTGGCCAACACA +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGTRMF*PGLANT
Trigger: TGTGTTGGCCAACCCAGGGCAAAACATCCTGGTTCC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGGTGCGACATAGGATaGTTTTCAGAGCTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGCDIG*FSELPG
Trigger: TCCAGGGAGCTCTGAAAAGCATCCTATGTCGCACCC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGTTGAGCTTCAGACCTaGCTGGAGAGAGCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRVELQT*LERACS
Trigger: AGAACACGCTCTCTCCAGGCAGGTCTGAAGCTCAAC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGAGCTCCCTGGACAATaGTACAGGGTCCCAAAATGC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRELPGQ*YRVPKC
Trigger: GCATTTTGGGACCCTGTACCATTGTCCAGGGAGCTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCTTTTCAGAGCTCCCTaGACAATGGTACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRLFRAP*TMVQGP
Trigger: GGGACCCTGTACCATTGTCCAGGGAGCTCTGAAAAG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGACATTAATTGGGTGTaGCTGGCAGGGTTGAGACCT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRDINWV*LAGLRP
Trigger: AGGTCTCAACCCTGCCAGTCACACCCAATTAATGTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGCAAGCGTAGTAACTTaGGACCAGAGGTTAGGGATC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRASVVT*DQRLGI
Trigger: GATCCCTAACCTCTGGTCCCAAGTTACTACGCTTGC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCTGGTTAGAGATCTTTaGGGGCTTGGATGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRLVRDL*GLGWRN
Trigger: GTTCCTCCATCCAAGCCCCCAAAGATCTCTAACCAG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGAGAAGAAACTGGGTaGCTGAAGGACAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGEETG*LKDRNE
Trigger: CTCATTCCTGTCCTTCAGCCACCCAGTTTCTTCTCC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCAGGGGAGGTTGCCTTTaGTGCTCATCTGAATCATGT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRRGGCL*CSSESC
Trigger: ACATGATTCAGATGAGCAGCAAAGGCAACCTCCCCT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGCTCTAGTACAGGCGTaGTCTCACTTTAAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRALVQA*SHFKKA
Trigger: GGCTTTCTTAAAGTGAGAGCACGCCTGTACTAGAGC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCAAGCAGGAACAATCTTaGACCCTTGACATGGTGCAT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRKQEQS*TLDMVH
Trigger: ATGCACCATGTCAAGGGTTCAAGATTGTTCCTGCTT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGAGGTTGCCTTTGCTaGTCATCTGAATCATGTATG +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGGCLC*SSESCM
Trigger: CATACATGATTCAGATGAGCAGCAAAGGCAACCTCC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGCATCTTTCATTGCCTaGGTAACTTCAGGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRASFIA*VTSGSV
Trigger: TACAGACCCTGAAGTTACCCAGGCAATGAAAGATGC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATGCTCACAGAACTCCTaGATCCGGCTGCACGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQCSQNS*IRLHAS
Trigger: GGAGGCGTGCAGCCGGATCCAGGAGTTCTGTGAGCA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCTTCCTGTTTATTTCTaGTTAGAGATCTTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRLPVYF*LEIFGG
Trigger: GCCCCCAAAGATCTCTAACCAGAAATAAACAGGAAG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACACTTTAAGAAAGCCTaGTGCCGCTGGGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQHFKKA*CRWARW
Trigger: CCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCCAGTGGTTCATATTTaGAATCCGAAAACACCATGT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRPVVHI*NPKTPC
Trigger: ACATGGTGTTTTCGGATTGCAAATATGAACCACTGG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGAAAATTTCCCTTGGTaGGAAATCTCTAGACTAGTT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRENFPW*EISRLV
Trigger: AACTAGTCTAGAGATTTCTCACCAAGGGAAATTTTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGTTTTGTTTGGATTTaGTTTCACCTTCATGTTGTC +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGFVWI*FHLHVV
Trigger: GACAACATGAAGGTGAAACCAAATCCAAACAAAACC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAATGCACGTCCAGAATTaGGGGGAGGTTGCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQMHVQN*GEVAFA
Trigger: AGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCAT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGAAGATGACGTTTGCTaGACACTGACCCACAGGGGT +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQEDDVC*TLTHRG
Trigger: ACCCCTGTGGGTCAGTGTTCAGCAAACGTCATCTTC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCTTCCCAAGATTTCTCTaGCAACAAATTGTAGAGTTT +
Preference number: 4 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRFPRFL*QQIVEF
Trigger: AAACTCTACAATTTGTTGCCAGAGAAATCTTGGGAA...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGGCCACCTGAGTCCCTaGGGAGCCGCAAGGCCTAGT +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGGHLSP*GAARPS
Trigger: ACTAGGCCTTGCGGCTCCTCAGGGACTCAGGTGGCC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATGTGACTGGCAGGGTTaGGACCTGAAGTTCCTCTTT +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQCDWQG*DLKFLF
Trigger: AAAGAGGAACTTCAGGTCTCAACCCTGCCAGTCACA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACAGGGCATCTTTCATTaGCTGGGTAACTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQQGIFH*LGNFRV
Trigger: GACCCTGAAGTTACCCAGGCAATGAAAGATGCCCTG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGCTGAGGGTGGCCAGTaGTTCATATTTGCAATCCGA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQAEGGQ*FIFAIR
Trigger: TCGGATTGCAAATATGAACCACTGGCCACCCTCAGC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACCTTTGCTGCTCATCTaGATCATGTATGGGTCCATC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQPLLLI*IMYGSI
Trigger: GATGGACCCATACATGATTCAGATGAGCAGCAAAGG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTGGGGACATCGGTGCTaGGGGTGGCCAGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVWGHRC*GWPVVH
Trigger: ATGAACCACTGGCCACCCTCAGCACCGATGTCCCCA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATTCTTTCTTAGAGTCTaGGGAAATGGTTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQFFLRV*GNGWGH
Trigger: GTGCCCCCAACCATTTCCTCAGACTCTAAGAAAGAA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGAGCCATCAACTTTGTaGCCTAGTGAGTGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQEPSTL*PSEWLV
Trigger: CACTAACCACTCACTAGGTCACAAAGTTGATGGCTC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACCAGCAAATGATAACTaGTTCCCTCAGGGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQPANDN*FPQGRR
Trigger: TCTTCTCCCCTGAGGGAATCAGTTATCATTTGCTGG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGAACCAGCCAGCGCTTaGCCAGCCCTCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGEPASA*PALHRT
Trigger: TGTCCTGTGGAGGGCTGGCCAAGCGCTGGCTGGTTC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAACACTTCTCATTCACTaGGTCAAGCCAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQTLLIH*VKPEPS
Trigger: TGATGGCTCTGGCTTGACCCAGTGAATGAGAAGTGT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGAGGTATACCTGAAGTaGGGCAATAAGAGAGTTGAG +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQEVYLK*GNKRVE
Trigger: CTCAACTCTCTTATTGCCTCACTTCAGGTATACCTC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGGCGGGCAGATTGCCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGGGQIA*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGCAATCTGCCCGCC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATTTCTGGAAGGTCTCTaGTTCCTGCTTGCTCTAGTA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQFLEGL*FLLALV
Trigger: TACTAGAGCAAGCAGGAATCAGAGACCTTCCAGAAA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGGGGACACACTGCCGTaGAGCCACTGCCAGAATCTT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVGDTLP*SHCQNL
Trigger: AAGATTCTGGCAGTGGCTGCACGGCAGTGTGTCCCC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACCTCAGGAGAATGGATaGAGGCCTATTTATCACACT +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQPQENG*RPIYHT
Trigger: AGTGTGATAAATAGGCCTGCATCCATTCTCCTGAGG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAAATGAGACTGAGGAGTaGCTGGGATTAGAAATTCCC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQNETEE*LGLEIP
Trigger: GGGAATTTCTAATCCCAGGCACTCCTCAGTCTCATT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCTCTTCGGTCATGAATaGGGATCCAGCCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLFGHE*GSSPTS
Trigger: GGAGGTTGGGCTGGATCCTCATTCATGACCGAAGAG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTTGACATGGTGCATTTaGGGCCCCTCTCCCAGTAGG +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLTWCI*GPSPSR
Trigger: CCTACTGGGAGAGGGGCCTCAAATGCACCATGTCAA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAAGATGGGGACACACTaGCGTGCAGCCACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGKMGTH*RAATAR
Trigger: TCTGGCAGTGGCTGCACGGCAGTGTGTCCCCATCTT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTAGGCAGTGGACAGACTaGTCAGCAACTAACCGCTCC +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVRQWTD*SATNRS
Trigger: GGAGCGGTTAGTTGCTGAGCAGTCTGTCCACTGCCT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGTTGCTGGGAGGCAGTaGACAGACTGCTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVVAGRQ*TDCSAT
Trigger: AGTTGCTGAGCAGTCTGTCCACTGCCTCCCAGCAAC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAACATCCTCAGGAGAATaGATGCAGGCCTATTTATCA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQTSSGE*MQAYLS
Trigger: TGATAAATAGGCCTGCATCCATTCTCCTGAGGATGT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATTCTATTGTGTAAAGTaGGGTATACCTGAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQFYCVK*GIPEVR
Trigger: CCTCACTTCAGGTATACCTCACTTTACACAATAGAA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGGCAAGAGAATCGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGGKRIA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCGATTCTCTTGCC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCTGCCGTGCAGCCACTaGCAGAATCTTCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLPCSH*QNLLKM
Trigger: CATCTTCAGAAGATTCTGGCAGTGGCTGCACGGCAG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGTACTCAAAGCACGTTaGTGGGAGGCAGTGGACAGA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVVLKAR*WEAVDR
Trigger: TCTGTCCACTGCCTCCCAGCAACGTGCTTTGAGTAC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGAGGTTATAACTTACTaGCTCTTGGTAAGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQEVITY*LLVSRK
Trigger: CTTCCTACTTACCAAGAGGCAGTAAGTTATAACCTC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTCTCAAAGCACGTTGCTaGGAGGCAGTGGACAGACTG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGLKARC*EAVDRL
Trigger: CAGTCTGTCCACTGCCTCCCAGCAACGTGCTTTGAG...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCCAGCCTTCCCTAGATaGGACACATCCTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVPAFPR*DTSSGE
Trigger: TTCTCCTGAGGATGTGTCCCATCTAGGGAAGGCTGG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTGGCTCGGATGGGGTTaGAAGTTTTCTTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVWLGWG*KFSWPC
Trigger: ACATGGCCAAGAAAACTTTCAACCCCATCCGAGCCA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCAACTAACCGCTCCGTaGACTCCACATCGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVQLTAP*TPHRSQ
Trigger: TTGAGAACGATGTGGAGTTCACGGAGCGGTTAGTTG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTACCACCTGGCCTTTCTaGCTTTCATTTTTCCCGGCA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVTTWPF*LSFFPA
Trigger: TGCCGGGAAAAATGAAAGGCAGAAAGGCCAGGTGGT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTCACACTCCTCCTGGCTaGCTTCAGCACAATGGTAGT +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGHTPPG*LQHNGS
Trigger: ACTACCATTGTGCTGAAGGCAGCCAGGAGGAGTGTG...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTCTCTGATTCCTGCTTaGTCTAGTACAGGCGTGCTC +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVSLIPA*SSTGVL
Trigger: GAGCACGCCTGTACTAGAGCAAGCAGGAATCAGAGA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTCAATCTCCTCCCGACTaGATAGGAAGCCGATGGATG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGQSPPD*IGSRWM
Trigger: CATCCATCGGCTTCCTATCCAGTCGGGAGGAGATTG...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTTCTCATCAGCTAAGATaGGGACACACTGCCGTGCAG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGSHQLR*GHTAVQ
Trigger: CTGCACGGCAGTGTGTCCCCATCTTAGCTGATGAGA...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCTTTGGGGGCTTGGATaGAGGAACAGGAAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLWGLG*RNRKRG
Trigger: TCCTCTTTTCCTGTTCCTCCATCCAAGCCCCCAAAG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTTTCTCCCACCAACGTTaGCATGCACGTCCAGAATTG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGFSHQR*HARPEL
Trigger: CAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAA...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGATCAGCATTGGACTTaGGGAAGCTCAGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVDQHWT*GSSECC
Trigger: ACAACACTCTGAGCTTCCTCAAGTCCAATGCTGATC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTAAGAAACTGGGTGGCTaGAGGACAGGAATGAGAAAG +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVKKLGG*RTGMRK
Trigger: CTTTCTCATTCCTGTCCTTCAGCCACCCAGTTTCTT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGAATTGAGGGGAGGTTaGCTTTGCTGCTCATCTGAA +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVELRGG*LCCSSE
Trigger: TTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATTAAAAGGTAAATTTTaGTGTGAGCTCACTGAACTC +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQLKGKF*CELTEL
Trigger: GAGTTCAGTGAGCTCACAGCAAAATTTACCTTTTAA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTGGATAGGAAGCCGATaGATGGGGCATAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVWIGSR*MGHSHY
Trigger: ATAATGGCTATGCCCCATCCATCGGCTTCCTATCCA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGCTTCAGACCTGCCTaGAGAGAGCGTGTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGSFRPA*RERVLS
Trigger: AGAAAGAACACGCTCTCTCCAGGCAGGTCTGAAGCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATGTTTGAAGAACCATTaGCTCCCTTATCAAAATGTA +
Preference number: 4 (lower is better)
Translates to: TRGRQINELVSHSSSAEQCLKNH*LPYQNV
Trigger: TACATTTTGATAAGGGAGCCAATGGTTCTTCAAACA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTCATAGCCATTATATTTaGCCGAGTCCAGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVHSHYI*PSPGHL
Trigger: AAGATGCCCTGGACTCGGGCAAATATAATGGCTATG...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGAGCAAGGGAGAATCTaGGATGTGAATGAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGEQGRI*DVNEED
Trigger: ATCCTCCTCATTCACATCGCAGATTCTCCCTTGCTC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGGGTGTGGTTGTACTTaGGGAAAAGCAGGAACAATC +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGGCGCT*GKAGTI
Trigger: GATTGTTCCTGCTTTTCCCCAAGTACAACCACACCC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTAAAGTGAGGTATACCTaGAGTGAGGCAATAAGAGAG +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVKVRYT*SEAIRE
Trigger: CTCTCTTATTGCCTCACTTCAGGTATACCTCACTTT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTTGTTTTGCCCTGGGTTaGCCAACACAGCTAAACAAA +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGCFALG*PTQLNK
Trigger: TTTGTTTAGCTGTGTTGGCCAACCCAGGGCAAAACA...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTTCTTTTCAAATGTTTaGAGAACCATTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVFFSNV*RTIGSL
Trigger: AAGGGAGCCAATGGTTCTTCAAACATTTGAAAAGAA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGGCACAGTATAATCTaGAAGTATGACCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGRHSII*KYDQQM
Trigger: CATTTGCTGGTCATACTTCCAGATTATACTGTGCCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR TCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTTGGCATACGGGAAACTaGAATCTTTATCTAATCTCA +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGWHTGN*NLYLIS
Trigger: TGAGATTAGATAAAGATTTCAGTTTCCCGTATGCCA...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR GCA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGAAAGAAGGACAGTTaGGTTTGTTTGTATCGTTTG +
Preference number: 4 (lower is better)
Translates to: KVENVKTKARGYNLLPLGRKKDS*VCLYRL
Trigger: CAAACGATACAAACAAACGCAACTGTCCTTCTTTCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
3UTR CAA 72 bp ATGAGAAAGAAGGACAGTTGCGTTTGTTTGTATCGTTaGAAATTGTCCAGTGTGTATGTGTTCTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: MRKKDSCVCLYR*KLSSVYVFFSN
Trigger: ATTTGAAAAGAACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTCTTTCTCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCACCCAGGCGGGCAGATaGCCTGAGGTCAGGAGTTTG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRTQAGR*PEVRSL
Trigger: CAAACTCCTGACCTCAGGCAATCTGCCCGCCTGGGT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGTACTCAAAGCACGTaGCTGGGAGGCAGTGGACAG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGTQST*LGGSGQ
Trigger: CTGTCCACTGCCTCCCAGCAACGTGCTTTGAGTACC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCCATGCACGTCCAGAATaGAGGGGAGGTTGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRHARPE*RGGCLC
Trigger: GCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATG...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 90 bp CATCTCAATTCCAACCATGAGGTACATAGCCCCAGAAGGGCGGACTaGCCGGAGTCCAGGGATGGCAGCCAACGCCCCATAACAGAGATC +
Preference number: 5 (lower is better)
Translates to: HLNSNHEVHSPRRAD*PESRDGSQRPITEI
Trigger: GATCTCTGTTATGGGGCGTTGGCTGCCATCCCTGGACTCCGGCCAGTCCGCCCTTCTGGGGCTATGTACCTCATGGTTGGAATTGAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000564007.2
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGAGGCAATAAGAGAGTaGAGCTTCAGACCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSREAIRE*SFRPAW
Trigger: CCAGGCAGGTCTGAAGCTCAACTCTCTTATTGCCTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCATGGCTCGGATGGGGTaGAAAGTTTTCTTGGCCATG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRMARMG*KVFLAM
Trigger: CATGGCCAAGAAAACTTTCAACCCCATCCGAGCCAT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGGTTTCACCTTCATGTaGTCCACAATGGCTCGGATG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRGFTFM*STMARM
Trigger: CATCCGAGCCATTGTGGACAACATGAAGGTGAAACC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGAGAGAAACCAGGTCTaGGAACCAGGATGTTTTGCC +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRERNQV*EPGCFA
Trigger: GGCAAAACATCCTGGTTCCAAGACCTGGTTTCTCTC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGGAACCAGCCAGCGCTaGGCCAGCCCTCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQGTSQR*ASPPQD
Trigger: GTCCTGTGGAGGGCTGGCCAAGCGCTGGCTGGTTCC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCGCCAGTGGTTCATATTaGCAATCCGAAAACACCATG +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRASGSY*QSENTM
Trigger: CATGGTGTTTTCGGATTGCAAATATGAACCACTGGC...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS TCA 90 bp CGGCACAGAGCTTCTCCCACCAACGTTGACATGCACGTCCAGAATTaGGGGGAGGTTGCCTTTGCTGCTCATCTGAATCATGTATGGGTC +
Preference number: 5 (lower is better)
Translates to: RHRASPTNVDMHVQN*GEVAFAAHLNHVWV
Trigger: GACCCATACATGATTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 90 bp CCTCAGGAGAATGGATGCAGGCCTATTTATCACACTCCTCCTGGCTaGCTTCAGCACAATGGTAGTGCTGCTCACAGAACTCCTGGATCC +
Preference number: 5 (lower is better)
Translates to: PQENGCRPIYHTPPG*LQHNGSAAHRTPGS
Trigger: GGATCCAGGAGTTCTGTGAGCAGCACTACCATTGTGCTGAAGGCAGCCAGGAGGAGTGTGATAAATAGGCCTGCATCCATTCTCCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000564007.2
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCATAACTTACTGCCTCTaGGTAAGTAGGAAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRITYCL*VSRKPE
Trigger: TTCTGGCTTCCTACTTACCAAGAGGCAGTAAGTTAT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS TCA 90 bp TTCTGCCTTTCATTTTTCCCGGCACAGAGCTTCTCCCACCAACGTTaGCATGCACGTCCAGAATTGAGGGGAGGTTGCCTTTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FCLSFFPAQSFSHQR*HARPELRGGCLCCS
Trigger: TGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCGGGAAAAATGAAAGGCAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 90 bp CATCTTCTCCAACCAGCCTGTGAACATGAGAGTAGAGGAGGACAATaGCAGCCCCTCAGTAGTGTCCCCAACTCACCAATGGACAGGGAA +
Preference number: 5 (lower is better)
Translates to: HLLQPACEHESRGGQ*QPLSSVPNSPMDRE
Trigger: TTCCCTGTCCATTGGTGAGTTGGGGACACTACTGAGGGGCTGTCATTGTCCTCCTCTACTCTCATGTTCACAGGCTGGTTGGAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS CCA 90 bp TGGCAGTCACCAGGTATGGAGTCTCAGGAGGAGCTTACCGATGGATaGGGCATAGCCATTATATTTGCCCGAGTCCAGGGCATCTTTCAT +
Preference number: 5 (lower is better)
Translates to: WQSPGMESQEELTDG*GIAIIFARVQGIFH
Trigger: ATGAAAGATGCCCTGGACTCGGGCAAATATAATGGCTATGCCCCATCCATCGGTAAGCTCCTCCTGAGACTCCATACCTGGTGACTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS CCA 90 bp GATTTGGCAGTCACCAGGTATGGAGTCTCAGGAGGAGCTTACCGATaGATGGGGCATAGCCATTATATTTGCCCGAGTCCAGGGCATCTT +
Preference number: 5 (lower is better)
Translates to: DLAVTRYGVSGGAYR*MGHSHYICPSPGHL
Trigger: AAGATGCCCTGGACTCGGGCAAATATAATGGCTATGCCCCATCCATCGGTAAGCTCCTCCTGAGACTCCATACCTGGTGACTGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS TCA 90 bp GATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGGATGGGGTTaGAAGTTTTCTTGGCCATGTCTGAGGGCCTCACAGACCACCTGG +
Preference number: 5 (lower is better)
Translates to: DLVSPSCCPQWLGWG*KFSWPCLRASQTTW
Trigger: CCAGGTGGTCTGTGAGGCCCTCAGACATGGCCAAGAAAACTTTCAACCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 90 bp AAATTCGGGTACTCAAAGCACGTTGCTGGGAGGCAGTGGACAGACTaGTCAGCAACTAACCGCTCCGTGAACTCCACATCGTTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: KFGYSKHVAGRQWTD*SATNRSVNSTSFSN
Trigger: ATTTGAGAACGATGTGGAGTTCACGGAGCGGTTAGTTGCTGAGCAGTCTGTCCACTGCCTCCCAGCAACGTGCTTTGAGTACCCGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AGGCGTGCTCTCACTTTAAGAAAGCCTGATGCCGCTGGGCGAGGTGGCTCACGCATGTTTGAAGAACCATaGGCTCCCTTATCAAAATGT +
Preference number: 5 (lower is better)
Translates to: RRALTLRKPDAAGRGGSRMFEEP*APLSKC
Trigger: ACATTTTGATAAGGGAGCCAATGGTTCTTCAAACAT...GCGTGAGCCACCTCGCCCAGCGGCATCAGGCTTTCTTAAAGTGAGAGCACGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS GCA 90 bp TGGGGCATAGCCATTATATTTGCCCGAGTCCAGGGCATCTTTCATTaGCTGGGTAACTTCAGGGTCTGTAGGCAGGTTTCCAAACACAGT +
Preference number: 5 (lower is better)
Translates to: WGIAIIFARVQGIFH*LGNFRVCRQVSKHS
Trigger: ACTGTGTTTGGAAACCTGCCTACAGACCCTGAAGTTACCCAGGCAATGAAAGATGCCCTGGACTCGGGCAAATATAATGGCTATGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 90 bp CAAGAGGTTATTCTCCCATGTTCAGTACTCAGACTCACCCCCAACTaGCATCTTCTCCAACCAGCCTGTGAACATGAGAGTAGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: QEVILPCSVLRLTPN*HLLQPACEHESRGG
Trigger: TCCTCCTCTACTCTCATGTTCACAGGCTGGTTGGAGAAGATGGCAGTTGGGGGTGAGTCTGAGTACTGAACATGGGAGAATAACCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS TCA 90 bp ACATGCACGTCCAGAATTGAGGGGAGGTTGCCTTTGCTGCTCATCTaGATCATGTATGGGTCCATCACTAGCGAAGCCTTCCAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: TCTSRIEGRLPLLLI*IMYGSITSEAFQVK
Trigger: CTTTACTTGGAAGGCTTCGCTAGTGATGGACCCATACATGATTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS CCA 90 bp TGCAATCCGAAAACACCATGTCTCCATAGATCTCATCAGCTAAGATaGGGACACACTGCCGTGCAGCCACTGCCAGAATCTTCTGAAGAT +
Preference number: 5 (lower is better)
Translates to: CNPKTPCLHRSHQLR*GHTAVQPLPESSED
Trigger: ATCTTCAGAAGATTCTGGCAGTGGCTGCACGGCAGTGTGTCCCCATCTTAGCTGATGAGATCTATGGAGACATGGTGTTTTCGGATTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAACTTCTCCCACCAACGTaGACATGCACGTCCAGAATT +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQLLPPT*TCTSRI
Trigger: AATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAG...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAACAAAGGTCAATAGCTaGGCTGCAGCCACTTGTCAG +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQTKVNS*AAATCQ
Trigger: CTGACAAGTGGCTGCAGCCAAGCTATTGACCTTTGT...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATCCCTTAGCTCTTCTTaGACAGGTTACAGGGGCAAT +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQSLSSS*TGYRGN
Trigger: ATTGCCCCTGTAACCTGTCAAAGAAGAGCTAAGGGA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 90 bp AAACACAGTAGGGTCCCCAATGGACAGGGAAATCATGGTTTTGTTTaGATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGGATGGG +
Preference number: 5 (lower is better)
Translates to: KHSRVPNGQGNHGFV*IWFHLHVVHNGSDG
Trigger: CCCATCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGGGACCCTACTGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000566094.5
CDS-3UTR CAA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTGGAACCAGGATGTTTaGCCCTGGGTTGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVWNQDV*PWVGQH
Trigger: GTGTTGGCCAACCCAGGGCAAAACATCCTGGTTCCA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS GCA 90 bp GGGACTGTGATGACCACTCGGATGAAATTCGGGTACTCAAAGCACTaGAAAAAGAAGAGTCTGTTACTTTCAGAGCAATTGAGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: GTVMTTRMKFGYSKH*KKKSLLLSEQLSLV
Trigger: TACCAGACTCAATTGCTCTGAAAGTAACAGACTCTTCTTTTTGCAGTGCTTTGAGTACCCGAATTTCATCCGAGTGGTCATCACAGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGGAGCCAGGCTTTTTaGGAAAATTGGCGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGRSQAF*ENWRQR
Trigger: CCGCTGCCGCCAATTTTCCAAAAAAGCCTGGCTCCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAAGACAGTTGCGTTTGTTaGTATCGTTTGAAATTGTCC +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQDSCVC*YRLKLS
Trigger: GGACAATTTCAAACGATACAAACAAACGCAACTGTC...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp ACGAGAGGGAGGCAGATTAATGAATTAGTGAGTCACTCTAGCAGCGCAGAGCAATGGTTTTGTTTGGATTaGGTTTCACCTTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: TRGRQINELVSHSSSAEQWFCLD*VSPSCC
Trigger: ACAACATGAAGGTGAAACCAAATCCAAACAAAACCA...TTGCTCTGCGCTGCTAGAGTGACTCACTAATTCATTAATCTGCCTCCCTCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGGCAAGCGTAGTAACTaGGGACCAGAGGTTAGGGAT +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGGKRSN*GPEVRD
Trigger: ATCCCTAACCTCTGGTCCCAAGTTACTACGCTTGCC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTATGTTTTGCCCTGGGTaGGCCAACACAGCTAAACAA +
Preference number: 5 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVMFCPG*ANTAKQ
Trigger: TTGTTTAGCTGTGTTGGCCAACCCAGGGCAAAACAT...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGAGATCTTTGGGGGCTaGGATGGAGGAACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGEIFGG*DGGTGK
Trigger: TTTTCCTGTTCCTCCATCCAAGCCCCCAAAGATCTC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTCCATCTCGGATCTCATaGCCAAAAATGTCTCTTCGG +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGPSRIS*PKMSLR
Trigger: CCGAAGAGACATTTTTGGCAATGAGATCCGAGATGG...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGATCAGCATTGGACTaGAGGAAGCTCAGAGTGTTG +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGRSALD*RKLRVL
Trigger: CAACACTCTGAGCTTCCTCAAGTCCAATGCTGATCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTGGGTTTGATGGATTATaGACAATGAGACAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVGFDGL*TMRQAV
Trigger: GACAGCTTGTCTCATTGTCAATAATCCATCAAACCC...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTAGGGAAATCATGGTTTaGTTTGGATTTGGTTTCACC +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGREIMV*FGFGFT
Trigger: GGTGAAACCAAATCCAAACAAAACCATGATTTCCCT...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp AAAGTTGAAAATGTAAAGACAAAGGCCAGAGGTTATAACTTACTGCCTCTTGGTGTTCTTTTCAAATGTTaGAAGAACCATTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: KVENVKTKARGYNLLPLGVLFKC*KNHWLP
Trigger: AGGGAGCCAATGGTTCTTCAAACATTTGAAAAGAAC...ACCAAGAGGCAGTAAGTTATAACCTCTGGCCTTTGTCTTTACATTTTCAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS-3UTR CAA 90 bp GAAGGACAGTTGCGTTTGTTTGTATCGTTTGAAATTGTCCAGTGTGTATGTGTTTTGTATCGTTTGAAATaGTCCAGTGTGTATGTGTTC +
Preference number: 5 (lower is better)
Translates to: EGQLRLFVSFEIVQCVCVLYRLK*SSVYVF
Trigger: GAACACATACACACTGGACAATTTCAAACGATACAA...AACACATACACACTGGACAATTTCAAACGATACAAACAAACGCAACTGTCCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 72 bp TCCAGCCCAACCTCCAGCCAGGAACCAGCCAGCGCTTaGCCAGCCCTCCACAGGACAGGATGGGGACATCGG +
Preference number: 6 (lower is better)
Translates to: SSPTSSQEPASA*PALHRTGWGHR
Trigger: CCGATGTCCCCATCCTGTCCTGTGGAGGGCTGGCCAAGCGCTGGCTGGTTCCTGGCTGGAGGTTGGGCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS GCA 72 bp CAGGCACCCACCGTTGCTGGGAGGCAGTGGACAGACTaGTCAGCAACTAACCGCTCCGTGAACTCCACATCG +
Preference number: 6 (lower is better)
Translates to: QAPTVAGRQWTD*SATNRSVNSTS
Trigger: CGATGTGGAGTTCACGGAGCGGTTAGTTGCTGAGCAGTCTGTCCACTGCCTCCCAGCAACGGTGGGTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS GCA 72 bp CCATGTCTGAGGGCCTCACAGACCACCTGGCCTTTCTaGCTTTCATTTTTCCCGGCACAGAGCTTCTCCCAC +
Preference number: 6 (lower is better)
Translates to: PCLRASQTTWPF*LSFFPAQSFSH
Trigger: GTGGGAGAAGCTCTGTGCCGGGAAAAATGAAAGGCAGAAAGGCCAGGTGGTCTGTGAGGCCCTCAGACATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 72 bp TTTCCCGGCACAGAGCTTCTCCCACCAACGTTGACATaGACGTCCAGAATTGAGGGGAGGTTGCCTTTGCTG +
Preference number: 6 (lower is better)
Translates to: FPGTELLPPTLT*TSRIEGRLPLL
Trigger: CAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 72 bp TACTCAAAGCACGTTGCTGGGAGGCAGTGGACAGACTaGTCAGCAACTAACCGCTCCGTGAACTCCACATCG +
Preference number: 6 (lower is better)
Translates to: YSKHVAGRQWTD*SATNRSVNSTS
Trigger: CGATGTGGAGTTCACGGAGCGGTTAGTTGCTGAGCAGTCTGTCCACTGCCTCCCAGCAACGTGCTTTGAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 72 bp CCAGGTATGGAGTCTCAGGAGGAGCTTACCGATGGATaGGGCATAGCCATTATATTTGCCCGAGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGMESQEELTDG*GIAIIFARVQG
Trigger: GCCCTGGACTCGGGCAAATATAATGGCTATGCCCCATCCATCGGTAAGCTCCTCCTGAGACTCCATACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS CCA 72 bp GGACAGGATGGGGACATCGGTGCTGAGGGTGGCCAGTaGTTCATATTTGCAATCCGAAAACACCATGTCTCC +
Preference number: 6 (lower is better)
Translates to: GQDGDIGAEGGQ*FIFAIRKHHVS
Trigger: GGAGACATGGTGTTTTCGGATTGCAAATATGAACCACTGGCCACCCTCAGCACCGATGTCCCCATCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 72 bp CCAGCCTTCCCTAGATGGGACACATCCTCAGGAGAATaGATGCAGGCCTATTTATCACACTCCTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PAFPRWDTSSGE*MQAYLSHSSWL
Trigger: CAGCCAGGAGGAGTGTGATAAATAGGCCTGCATCCATTCTCCTGAGGATGTGTCCCATCTAGGGAAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000564007.2
CDS TCA 72 bp TCATTTTTCCCGGCACAGAGCTTCTCCCACCAACGTTaGCATGCACGTCCAGAATTGAGGGGAGGTTGCCTT +
Preference number: 6 (lower is better)
Translates to: SFFPAQSFSHQR*HARPELRGGCL
Trigger: AAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCGGGAAAAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp CAACCAGCCTGTGAACATGAGAGTAGAGGAGGACAATaGCAGCCCCTCAGTAGTGTCCCCAACTCACCAATG +
Preference number: 6 (lower is better)
Translates to: QPACEHESRGGQ*QPLSSVPNSPM
Trigger: CATTGGTGAGTTGGGGACACTACTGAGGGGCTGTCATTGTCCTCCTCTACTCTCATGTTCACAGGCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS CCA 72 bp GTCACCAGGTATGGAGTCTCAGGAGGAGCTTACCGATaGATGGGGCATAGCCATTATATTTGCCCGAGTCCA +
Preference number: 6 (lower is better)
Translates to: VTRYGVSGGAYR*MGHSHYICPSP
Trigger: TGGACTCGGGCAAATATAATGGCTATGCCCCATCCATCGGTAAGCTCCTCCTGAGACTCCATACCTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS CAA 72 bp TTCATTTTTCCCGGCACAGAGCTTCTCCCACCAACGTaGACATGCACGTCCAGAATTGAGGGGAGGTTGCCT +
Preference number: 6 (lower is better)
Translates to: FIFPGTELLPPT*TCTSRIEGRLP
Trigger: AGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCGGGAAAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS CAA 90 bp TTTCTGCCTTTCATTTTTCCCGGCACAGAGCTTCTCCCACCAACGTaGACATGCACGTCCAGAATTGAGGGGAGGTTGCCTTTGCTGCTC +
Preference number: 6 (lower is better)
Translates to: FLPFIFPGTELLPPT*TCTSRIEGRLPLLL
Trigger: GAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGCTCTGTGCCGGGAAAAATGAAAGGCAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS CAA 90 bp GGATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGGATGGGGTaGAAAGTTTTCTTGGCCATGTCTGAGGGCCTCACAGACCACCTG +
Preference number: 6 (lower is better)
Translates to: GFGFTFMLSTMARMG*KVFLAMSEGLTDHL
Trigger: CAGGTGGTCTGTGAGGCCCTCAGACATGGCCAAGAAAACTTTCAACCCCATCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp GCTTCTCCCACCAACGTTGACATGCACGTCCAGAATTaGGGGGAGGTTGCCTTTGCTGCTCATCTGAATCAT +
Preference number: 6 (lower is better)
Translates to: ASPTNVDMHVQN*GEVAFAAHLNH
Trigger: ATGATTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATGTCAACGTTGGTGGGAGAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp TCACCTTCATGTTGTCCACAATGGCTCGGATGGGGTTaGAAGTTTTCTTGGCCATGTCTGAGGGCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SPSCCPQWLGWG*KFSWPCLRASQ
Trigger: CTGTGAGGCCCTCAGACATGGCCAAGAAAACTTTCAACCCCATCCGAGCCATTGTGGACAACATGAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp GTCTGGTACTGGACCACCCTAAAATGGTCAGGACCCTaGTCCACAAGAAGTGGTACCATTTCATCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: VWYWTTLKWSGP*STRSGTISSGP
Trigger: TGGCCCTGATGAAATGGTACCACTTCTTGTGGATCAGGGTCCTGACCATTTTAGGGTGGTCCAGTACCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS GCA 72 bp CATGCACGTCCAGAATTGAGGGGAGGTTGCCTTTGCTaGTCATCTGAATCATGTATGGGTCCATCACTAGCG +
Preference number: 6 (lower is better)
Translates to: HARPELRGGCLC*SSESCMGPSLA
Trigger: CGCTAGTGATGGACCCATACATGATTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGACGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS GCA 72 bp GCCATTATATTTGCCCGAGTCCAGGGCATCTTTCATTaGCTGGGTAACTTCAGGGTCTGTAGGCAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: AIIFARVQGIFH*LGNFRVCRQVS
Trigger: GGAAACCTGCCTACAGACCCTGAAGTTACCCAGGCAATGAAAGATGCCCTGGACTCGGGCAAATATAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS CAA 90 bp CCTAGAGGGGAAGTGCCCATATGTCAAAGAAAGCCAGGAAAGAAGTaGGACCTTGATGCCTTGTATTTAAGCATCCCGAGACCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: PRGEVPICQRKPGKK*DLDALYLSIPRPGS
Trigger: GGAACCGGGTCTCGGGATGCTTAAATACAAGGCATCAAGGTCCAACTTCTTTCCTGGCTTTCTTTGACATATGGGCACTTCCCCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp TCCAGAATTGAGGGGAGGTTGCCTTTGCTGCTCATCTaGATCATGTATGGGTCCATCACTAGCGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: SRIEGRLPLLLI*IMYGSITSEAF
Trigger: GAAGGCTTCGCTAGTGATGGACCCATACATGATTCAGATGAGCAGCAAAGGCAACCTCCCCTCAATTCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS TCA 72 bp GGCAGTGGACAGACTGCTCAGCAACTAACCGCTCCGTaGACTCCACATCGTTCTCAAATTCTGGGAAATGTT +
Preference number: 6 (lower is better)
Translates to: GSGQTAQQLTAP*TPHRSQILGNV
Trigger: AACATTTCCCAGAATTTGAGAACGATGTGGAGTTCACGGAGCGGTTAGTTGCTGAGCAGTCTGTCCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000564007.2
CDS GCA 72 bp AATGGATGCAGGCCTATTTATCACACTCCTCCTGGCTaGCTTCAGCACAATGGTAGTGCTGCTCACAGAACT +
Preference number: 6 (lower is better)
Translates to: NGCRPIYHTPPG*LQHNGSAAHRT
Trigger: AGTTCTGTGAGCAGCACTACCATTGTGCTGAAGGCAGCCAGGAGGAGTGTGATAAATAGGCCTGCATCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000564007.2
CDS GCA 72 bp ATTCTCCCATGTTCAGTACTCAGACTCACCCCCAACTaGCATCTTCTCCAACCAGCCTGTGAACATGAGAGT +
Preference number: 6 (lower is better)
Translates to: ILPCSVLRLTPN*HLLQPACEHES
Trigger: ACTCTCATGTTCACAGGCTGGTTGGAGAAGATGGCAGTTGGGGGTGAGTCTGAGTACTGAACATGGGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS CCA 72 bp AAAACACCATGTCTCCATAGATCTCATCAGCTAAGATaGGGACACACTGCCGTGCAGCCACTGCCAGAATCT +
Preference number: 6 (lower is better)
Translates to: KTPCLHRSHQLR*GHTAVQPLPES
Trigger: AGATTCTGGCAGTGGCTGCACGGCAGTGTGTCCCCATCTTAGCTGATGAGATCTATGGAGACATGGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CCA 72 bp TTATATTTGCCCGAGTCCAGGGCATCTTTCATTGCCTaGGTAACTTCAGGGTCTGTAGGCAGGTTTCCAAAC +
Preference number: 6 (lower is better)
Translates to: LYLPESRASFIA*VTSGSVGRFPN
Trigger: GTTTGGAAACCTGCCTACAGACCCTGAAGTTACCCAGGCAATGAAAGATGCCCTGGACTCGGGCAAATATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355962.5
ENST00000566010.1
ENST00000566094.5
CDS CCA 72 bp CACCCTAAAATGGTCAGGACCCTGATCCACAAGAAGTaGTACCATTTCATCAGGGCCATCAGTTCATTCAGC +
Preference number: 6 (lower is better)
Translates to: HPKMVRTLIHKK*YHFIRAISSFS
Trigger: GCTGAATGAACTGATGGCCCTGATGAAATGGTACCACTTCTTGTGGATCAGGGTCCTGACCATTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS CAA 72 bp AAACCAGGTCTTGGAACCAGGATGTTTTGCCCTGGGTaGGCCAACACAGCTAAACAAAGGTCAATAGCTTGG +
Preference number: 6 (lower is better)
Translates to: KPGLGTRMFCPG*ANTAKQRSIAW
Trigger: CCAAGCTATTGACCTTTGTTTAGCTGTGTTGGCCAACCCAGGGCAAAACATCCTGGTTCCAAGACCTGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355962.5
CDS CAA 90 bp CCCATATGTCAAAGAAAGCCAGGAAAGAAGTTGGACCTTGATGCCTaGTATTTAAGCATCCCGAGACCCGGTTCCCAAATCCAAAGGACC +
Preference number: 6 (lower is better)
Translates to: PICQRKPGKKLDLDA*YLSIPRPGSQIQRT
Trigger: GGTCCTTTGGATTTGGGAACCGGGTCTCGGGATGCTTAAATACAAGGCATCAAGGTCCAACTTCTTTCCTGGCTTTCTTTGACATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS CAA 90 bp GTAGTGTCCCCAACTCACCAATGGACAGGGAAATCATGGTTTTGTTaGGATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGGATGG +
Preference number: 6 (lower is better)
Translates to: VVSPTHQWTGKSWFC*DLVSPSCCPQWLGW
Trigger: CCATCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGTGAGTTGGGGACACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS CAA 90 bp CTCAGTAGTGTCCCCAACTCACCAATGGACAGGGAAATCATGGTTTaGTTTGGATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGG +
Preference number: 6 (lower is better)
Translates to: LSSVPNSPMDREIMV*FGFGFTFMLSTMAR
Trigger: CCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGTGAGTTGGGGACACTACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS CAA 72 bp CAAAGAAAGCCAGGAAAGAAGTTGGACCTTGATGCCTaGTATTTAAGCATCCCGAGACCCGGTTCCCAAATC +
Preference number: 6 (lower is better)
Translates to: QRKPGKKLDLDA*YLSIPRPGSQI
Trigger: GATTTGGGAACCGGGTCTCGGGATGCTTAAATACAAGGCATCAAGGTCCAACTTCTTTCCTGGCTTTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566010.1
ENST00000566094.5
CDS CAA 90 bp TTTCCAAACACAGTAGGGTCCCCAATGGACAGGGAAATCATGGTTTaGTTTGGATTTGGTTTCACCTTCATGTTGTCCACAATGGCTCGG +
Preference number: 6 (lower is better)
Translates to: FPNTVGSPMDREIMV*FGFGFTFMLSTMAR
Trigger: CCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGGGACCCTACTGTGTTTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000566094.5
CDS CAA 72 bp CCCCAATGGACAGGGAAATCATGGTTTTGTTTGGATTaGGTTTCACCTTCATGTTGTCCACAATGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: PQWTGKSWFCLD*VSPSCCPQWLG
Trigger: TCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355962.5
ENST00000566094.5
CDS CAA 90 bp TACTCAAAGCACTGCAAAAAGAAGAGTCTGTTACTTTCAGAGCAATaGAGTCTGGTACTGGACCACCCTAAAATGGTCAGGACCCTGATC +
Preference number: 6 (lower is better)
Translates to: YSKHCKKKSLLLSEQ*SLVLDHPKMVRTLI
Trigger: GATCAGGGTCCTGACCATTTTAGGGTGGTCCAGTACCAGACTCAATTGCTCTGAAAGTAACAGACTCTTCTTTTTGCAGTGCTTTGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS CAA 72 bp CACTGCAAAAAGAAGAGTCTGTTACTTTCAGAGCAATaGAGTCTGGTACTGGACCACCCTAAAATGGTCAGG +
Preference number: 6 (lower is better)
Translates to: HCKKKSLLLSEQ*SLVLDHPKMVR
Trigger: CCTGACCATTTTAGGGTGGTCCAGTACCAGACTCAATTGCTCTGAAAGTAACAGACTCTTCTTTTTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS CAA 72 bp CACCAATGGACAGGGAAATCATGGTTTTGTTTGGATTaGGTTTCACCTTCATGTTGTCCACAATGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: HQWTGKSWFCLD*VSPSCCPQWLG
Trigger: TCCGAGCCATTGTGGACAACATGAAGGTGAAACCAAATCCAAACAAAACCATGATTTCCCTGTCCATTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566010.1
CDS TCA 72 bp ACTGCAAAAAGAAGAGTCTGTTACTTTCAGAGCAATTaGGTCTGGTACTGGACCACCCTAAAATGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: TAKRRVCYFQSN*VWYWTTLKWSG
Trigger: TCCTGACCATTTTAGGGTGGTCCAGTACCAGACTCAATTGCTCTGAAAGTAACAGACTCTTCTTTTTGCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS CAA 72 bp TGTGGGACAGGATCAATTTCCTCTCACCTAGAACGTTaGTTTACAACTTTTCTTCCCAGTATGGATGGGATT +
Preference number: 6 (lower is better)
Translates to: CGTGSISSHLER*FTTFLPSMDGI
Trigger: AATCCCATCCATACTGGGAAGAAAAGTTGTAAACAAACGTTCTAGGTGAGAGGAAATTGATCCTGTCCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564007.2
CDS CAA 90 bp AAAATGACTTGTGGGACAGGATCAATTTCCTCTCACCTAGAACGTTaGTTTACAACTTTTCTTCCCAGTATGGATGGGATTATGATGGGG +
Preference number: 6 (lower is better)
Translates to: KMTCGTGSISSHLER*FTTFLPSMDGIMMG
Trigger: CCCCATCATAATCCCATCCATACTGGGAAGAAAAGTTGTAAACAAACGTTCTAGGTGAGAGGAAATTGATCCTGTCCCACAAGTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564007.2