RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TASOR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108021

Ensembl transcript IDs: ENST00000328090.9, ENST00000380270.3, ENST00000459693.1, ENST00000463468.5, ENST00000473789.5, ENST00000477043.5, ENST00000480839.6, ENST00000482419.1, ENST00000487196.1, ENST00000496681.5, ENST00000527124.1, ENST00000532080.1, ENST00000645567.1

Found 419 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCGCCCCCGAGGACCTaGGATCCCGGCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPPPRT*DPGSAS
Trigger: GGAGGCCGAGCCGGGATCTCAGGTCCTCGGGGGCGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTACCGTCCTTGGCGTaGCCGCCGCCCCCGAGGACC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVPSLA*PPPPRT
Trigger: GGTCCTCGGGGGCGGCGGCCACGCCAAGGACGGTAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCTTCTCCCGGCCGTaGTCTGCGTCCTCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICFSRP*SASSRA
Trigger: GGCCCGGGAGGACGCAGAGCACGGCCGGGAGAAGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACGACACCGGCGCACGTaGGAAGCACCAGTCGCCGGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRHRRT*EAPVAG
Trigger: GCCGGCGACTGGTGCTTCCCACGTGCGCCGGTGTCG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCCAGCCAAGGCCAGTaGGCCAGAGCGGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIASQGQ*ARAGNS
Trigger: GGAGTTCCCCGCTCTGGCGCACTGGCCTTGGCTGGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTTTTGTACCGTCCTTaGCGTGGCCGCCGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVLYRP*RGRRPR
Trigger: TCGGGGGCGGCGGCCACGCCAAGGACGGTACAAAAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGACGCCCGGCAGCCTaGGAGAACATGCCGACTTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGRPAA*ENMPTF
Trigger: GAAAGTCGGCATGTTCTCGCAGGCTGCCGGGCGTCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTGTGTTGGGGAGGGTaGCTGTGTCTCTGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVCWGG*LCLCSA
Trigger: GGCGGAGCAGAGACACAGCCACCCTCCCCAACACAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCCGACTTTCTCTCTaGCCGGCGCTAGCAACCGGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICRLSL*PALATG
Trigger: TCCGGTTGCTAGCGCCGGTCAGAGAGAAAGTCGGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGATGTGGTGTTGGACTaGGGGCCAGCAGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDVVLD*GPAVPG
Trigger: TCCAGGCACTGCTGGCCCTCAGTCCAACACCACATC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGCCACCTGCCAAGTaGTTGTCCAGGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILPPAK*LSRSWA
Trigger: TGCCCAGCTCCTGGACAAGCACTTGGCAGGTGGCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACGGTGGTCGATCCTTaGGCTTCACCACGGGGTCGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITVVDP*ASPRGR
Trigger: ACGACCCCGTGGTGAAGCCCAAGGATCGACCACCGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACACACGGGCAGACGGTaGTCGATCCTTGGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHTGRR*SILGLH
Trigger: GTGAAGCCCAAGGATCGACCACCGTCTGCCCGTGTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTCGTCTCCATGCCTaGAACCCAGCTAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIARLHA*NPARAA
Trigger: GGCTGCTCTAGCTGGGTTCCAGGCATGGAGACGAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGCGTGGGGACCACTaGGCACATGCATCCCTGTGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKRGDH*AHASLC
Trigger: ACACAGGGATGCATGTGCTCAGTGGTCCCCACGCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGCCACAGTTTGCACTaGAACTCGGGTGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGHSLH*NSGASS
Trigger: TGAGGAGGCACCCGAGTTTCAGTGCAAACTGTGGCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTAAAGTGTTCTGGGTaGGGTCGTCTGCCACCTGCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILKCSG*GRLPPA
Trigger: GGCAGGTGGCAGACGACCTCACCCAGAACACTTTAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTCTTCATAGGAGGCTaGCCGTCCTGGGAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVFIGG*PSWERQ
Trigger: CTGCCTTTCCCAGGACGGTCAGCCTCCTATGAAGAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGGCAGGCCACAGTTTaGACTGAAACTCGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGQATV*TETRVP
Trigger: AGGCACCCGAGTTTCAGTGCAAACTGTGGCCTGCCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGTCGTCTGCCACCTaGCAAGTGCTTGTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRSSAT*QVLVQE
Trigger: CTCCTGGACAAGCACTTGGCAGGTGGCAGACGACCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGGTGAGGTCGTCTaGCACCTGCCAAGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILGEVV*HLPSAC
Trigger: ACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCTTGTCCAGGAGCTaGGCAGGCCACAGTTTGCAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICLSRS*AGHSLH
Trigger: GTGCAAACTGTGGCCTGCCCAGCTCCTGGACAAGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTGCCCCTGTGGTCTaGGATCTGACTCCACAACTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAAPVV*DLTPQL
Trigger: CAGTTGTGGAGTCAGATCCCAGACCACAGGGGCAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGCTGTCCAGACTGCTaGCTGTGTAGCCTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISCPDC*LCSLSW
Trigger: CCAGGAGAGGCTACACAGCCAGCAGTCTGGACAGCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCCTCAGTAAGTGCTaGCTGGGCTTTAGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLSKC*LGFSRG
Trigger: GCCCCTGCTAAAGCCCAGTCAGCACTTACTGAGGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGATGCCGAAATGGCATaGCTTTCCCCACTGGGGTTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDAEMA*LSPLGL
Trigger: CAACCCCAGTGGGGAAAGTCATGCCATTTCGGCATC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGCAAAAGGCCGGGCTaGTGCCGAAATGGCATGACT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISKRPG*CRNGMT
Trigger: AGTCATGCCATTTCGGCATCAGCCCGGCCTTTTGCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGTTGGCGTAAGTCCTaGGGATCCCGTGGAGATCTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISWRKS*GSRGDL
Trigger: GAGATCTCCACGGGATCCTCAGGACTTACGCCAACT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACTGAGGGCCAGCAGTaGCTGGACCTGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITEGQQ*LDLWFL
Trigger: AAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTTCTGCTCCTAGGTaGAGGATGCAGAAATGGGGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIASAPR*RMQKWG
Trigger: GCCCCATTTCTGCATCCTGCACCTAGGAGCAGAAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGAGCTGTCCAGACTaGTGGCTGTGTAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKSCPD*WLCSLS
Trigger: GGAGAGGCTACACAGCCAGCAGTCTGGACAGCTCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTACTCTGCACCATGTaGGGCATGCTGGCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLCTM*GMLAFL
Trigger: GAGGAAGGCCAGCATGCCCCACATGGTGCAGAGTAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATGACTTTCCCCACTaGGGTTGCTGCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHDFPH*GCCFRA
Trigger: AGCCCTGAAGCAGCAACCCCAGTGGGGAAAGTCATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGGCTGATGCCGAAATaGCATGACTTTCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGLMPK*HDFPHW
Trigger: CCAGTGGGGAAAGTCATGCCATTTCGGCATCAGCCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTCTGACATATCACTaGCTGACTGCCAGGCCCATC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIALTYH*LTARPI
Trigger: GATGGGCCTGGCAGTCAGCCAGTGATATGTCAGAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTCCTGAGGATCCCGTaGAGATCTCGGATTTGGACG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVLRIP*RSRIWT
Trigger: CGTCCAAATCCGAGATCTCCACGGGATCCTCAGGAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATGCTCATGGTGTGTTaGGGAGGGTGGCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIMLMVC*GGWLCL
Trigger: GAGACACAGCCACCCTCCCCAACACACCATGAGCAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTTTAGCAGGGGCCTaGCTACAAGGAACCAAGCTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIALAGA*LQGTKL
Trigger: AAGCTTGGTTCCTTGTAGTCAGGCCCCTGCTAAAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGCCGAGGAGACTCTaGGTCTGTGAAAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRPRRL*VCERKS
Trigger: GGATTTCCTTTCACAGACTCAGAGTCTCCTCGGCCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTCTCTGCTTTCTGTaGGAGCCACCTCTTCCGGTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLCFL*EPPLPV
Trigger: AACCGGAAGAGGTGGCTCTCACAGAAAGCAGAGAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGTGGTCTGGGATCTaGCTCCACAACTGTTACCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILWSGI*LHNCYQ
Trigger: CTGGTAACAGTTGTGGAGTCAGATCCCAGACCACAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGGCAGGCTGTAGTTaGGTCACCAATAGCTACTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQAGCS*VTNSYS
Trigger: GGAGTAGCTATTGGTGACTCAACTACAGCCTGCCTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATATCACTGGCTGACTaGCAGGCCCATCGTAAGTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIISLAD*QAHRKS
Trigger: GGACTTACGATGGGCCTGGCAGTCAGCCAGTGATAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACGACCTCTCCATCTCTaGCTAGGGTTTCAGAACCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRPLHL*LGFQNQ
Trigger: CTGGTTCTGAAACCCTAGGCAGAGATGGAGAGGTCG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGAAGAACAAAGCGTaGGGACCACTGAGCACATGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRKNKA*GPLSTC
Trigger: GCATGTGCTCAGTGGTCCCCACGCTTTGTTCTTCCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGTCTAAAGTGTTCTaGGTGAGGTCGTCTGCCACC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRSKVF*VRSSAT
Trigger: GGTGGCAGACGACCTCACCCAGAACACTTTAGACCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAAACACAAGGAGACTaGGGATGCTCTGCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIETQGD*GCSASK
Trigger: CTTGCTAGCAGAGCATCCTCAGTCTCCTTGTGTTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTCTCTCCACCTACTaGCGAGGCACAAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICLSTY*RGTKVL
Trigger: AAGTACCTTTGTGCCTCGTCAGTAGGTGGAGAGACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTCCTCAGGCCGTGTaGAGTTCTCATGGTATCTTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPPQAV*SSHGIF
Trigger: AAAGATACCATGAGAACTTCACACGGCCTGAGGAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGCAGATACATCTCTTaGGCAGTGGCTTCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGRYIS*AVASPE
Trigger: TTCTGGAGAAGCCACTGCTCAAGAGATGTATCTGCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACACGGAGTCCACACTaGCATACCAATTTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITRSPH*HTNFAC
Trigger: GCAGGCAAAATTGGTATGTCAGTGTGGACTCCGTGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCAGACCCATCTGCTTaGCTCCAAAATCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIADPSA*LQNLVL
Trigger: CAGAACCAGATTTTGGAGGCAAGCAGATGGGTCTGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCCTTCCTCTTAGGCTaGACTCTCAGATTTGACGCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAFLLG*TLRFDA
Trigger: AGCGTCAAATCTGAGAGTGCAGCCTAAGAGGAAGGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGGCCTTGTGTTCGTaGATTTTCCGAGGTGGATAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQALCS*IFRGGY
Trigger: GTATCCACCTCGGAAAATGCACGAACACAAGGCCTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACTGGCCATTCTGCCTaGTGGTATTTCCTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITGHSA*WYFLCL
Trigger: CAAGCACAGGAAATACCAGCAGGCAGAATGGCCAGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCAAACTGGCCATTCTaGCTGCTGGTATTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIANWPF*LLVFPV
Trigger: CACAGGAAATACCAGCAGGCAGAATGGCCAGTTTGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGAAGCAGTTCTTTTaGGAAAGGGGCGGCACAAGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWKQFF*ERGGTS
Trigger: ACTTGTGCCGCCCCTTTCCCAAAAGAACTGCTTCCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAGTCACCTGATGTGTaGCATCCTGACGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIESPDV*HPDEMQ
Trigger: CTGCATTTCGTCAGGATGCCACACATCAGGTGACTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACATCTTGCAGCGTGTaGATGGCTTTGCGTTCACCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITSCSV*MALRSP
Trigger: AGGTGAACGCAAAGCCATCCACACGCTGCAAGATGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGCCCCAGTCCTCTTaGTTGTTGTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQPQSS*LLLWKF
Trigger: GAACTTCCACAACAACAACCAAGAGGACTGGGGCTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCACCAATGGAGATCTaGGTTGGTGACTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAPMEI*VGDSFG
Trigger: TCCAAAGGAGTCACCAACCCAGATCTCCATTGGTGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTCATAAATGCTCATaGTGTGTTGGGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICHKCS*CVGEGG
Trigger: GCCACCCTCCCCAACACACCATGAGCATTTATGACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGCACTCTCAGATTTaGCGCTGGACTCAATGGAAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILHSQI*RWTQWK
Trigger: TTTCCATTGAGTCCAGCGTCAAATCTGAGAGTGCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTGGGAGTCATAGTTaGCGATGGAGTTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPGSHS*RWSFQE
Trigger: TTCCTGAAAACTCCATCGTCAACTATGACTCCCAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAGACTCTGAGTCTGTaGAAGGAAATCCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIETLSL*KEILSA
Trigger: TGCACTCAGGATTTCCTTTCACAGACTCAGAGTCTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACGAAATGCAGTTAAGTaGACACTGCCTTCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRNAVK*TLPSQG
Trigger: ACCTTGGGAAGGCAGTGTTCACTTAACTGCATTTCG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGATAACTCTAGGCTaGCCTCTCTACTCACAGACA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILITLG*PLYSQT
Trigger: TGTCTGTGAGTAGAGAGGTCAGCCTAGAGTTATCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCAGGAGAAGGACTaGAGTCACCTGTGCATTTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFQEKD*SHLCIW
Trigger: CCAAATGCACAGGTGACTTCAGTCCTTCTCCTGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGAAAGAGATGGTTCTaGCTGCTTTTAGGGCTAGTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGKRWF*LLLGLV
Trigger: GACTAGCCCTAAAAGCAGTCAGAACCATCTCTTTCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCAAAGGCTCTTTACTaGGGTTTTCCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPKALY*GFPWCL
Trigger: CAGACACCAAGGAAAACCTCAGTAAAGAGCCTTTGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTACTCCAGCAAAGATaGCACTGGGGAAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLQQR*HWGNAS
Trigger: TGAAGCATTTCCCCAGTGTCATCTTTGCTGGAGTAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCACCTTTTTACTCTaGACCATGTGGGGCATGCTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFTFLL*TMWGML
Trigger: CAGCATGCCCCACATGGTGCAGAGTAAAAAGGTGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTCCGAGCTGTTGTCTaGTCTGGAAGCAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVRAVV*SGSSSF
Trigger: AAAAGAACTGCTTCCAGAGCAGACAACAGCTCGGAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCTGTACAAACTGTaGAGTCAGCACTTCCGCACC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLYKL*SQHFRT
Trigger: GGTGCGGAAGTGCTGACTGCACAGTTTGTACAGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTGTTTTCAAGGGTaGCGTACACAGAGCTCTGAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILCFQG*RTQSSD
Trigger: GTCAGAGCTCTGTGTACGGCACCCTTGAAAACAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGTTAAGTGAACACTaGCTTCCCAAGGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQLSEH*LPKVVE
Trigger: CTCTACCACCTTGGGAAGGCAGTGTTCACTTAACTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGGTAAAGTTATCTTaGCCCACTGGATGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWVKLS*PTGWVG
Trigger: TCCTACCCATCCAGTGGGGCAAGATAACTTTACCCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCTGGTATTTCCTGTaGTTGAAACACTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICWYFL*LKHWLC
Trigger: GCAGAGCCAGTGTTTCAAGCACAGGAAATACCAGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCGTGTGGATGGCTTTaGGTTCACCTTTTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIACGWL*VHLLEK
Trigger: CTTCTCTAAAAGGTGAACGCAAAGCCATCCACACGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATGTTGACACATCTTaGAGCGTGTGGATGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHVDTS*SVWMAL
Trigger: CAAAGCCATCCACACGCTGCAAGATGTGTCAACATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGTGGCTTAGCCCTTaGAACAGTTTTGACTGGAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRWLSP*NSFDWR
Trigger: TCTCCAGTCAAAACTGTTCCAAGGGCTAAGCCACCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTTGCCCCACTGGATaGGTAGGACCAACAAAAACA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISCPTG*VGPTKT
Trigger: TGTTTTTGTTGGTCCTACCCATCCAGTGGGGCAAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTTATCTTGCCCCACTaGATGGGTAGGACCAACAAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVILPH*MGRTNK
Trigger: TTTGTTGGTCCTACCCATCCAGTGGGGCAAGATAAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTACCAGGAAGGGTTaGTCTACCTGTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFTRKG*STCSSW
Trigger: CCAGGAAGAACAGGTAGACCAACCCTTCCTGGTAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGCCATTCTGCCTGCTaGTATTTCCTGTGCTTGAAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGHSAC*YFLCLK
Trigger: TTTCAAGCACAGGAAATACCAGCAGGCAGAATGGCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTTAGAGAAGATGTaGTGTTGGACTGAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLEKM*CWTEGQ
Trigger: CTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTGCAGCGTGTGGATaGCTTTGCGTTCACCTTTTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILAACG*LCVHLL
Trigger: TAAAAGGTGAACGCAAAGCCATCCACACGCTGCAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTTTGGAAAGACATTaGCAGAGGAGGCAGAATGCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPLERH*QRRQNA
Trigger: AGCATTCTGCCTCCTCTGCCAATGTCTTTCCAAAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGGGAAAGCACCAATaGAGATCTGGGTTGGTGACT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKGKHQ*RSGLVT
Trigger: AGTCACCAACCCAGATCTCCATTGGTGCTTTCCCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGTGAAACTGCCCTCTaGAAGAGAGAGTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISETAL*KRESEL
Trigger: GAGTTCAGACTCTCTCTTCCAGAGGGCAGTTTCACT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTATACACCTTTGGCTaGATCACCCAGAGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVYTFG*ITQSGN
Trigger: GTTACCACTCTGGGTGATCCAGCCAAAGGTGTATAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATCACAAATTCCGTCTaGAACACAAGGAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIITNSV*NTRRLR
Trigger: CCTCAGTCTCCTTGTGTTTCAGACGGAATTTGTGAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGCAGTTTCTCCTTTaGCAGGTTGTAGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKQFLL*QVVAAF
Trigger: GAAAGCAGCTACAACCTGTCAAAGGAGAAACTGCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCAGGAAGATCATTGTaGGCCGCTGTGGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISGRSL*AAVVFS
Trigger: AGAAAATACCACAGCGGCTCACAATGATCTTCCTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGGAGCAGGGCATATaGATGTTCCACAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKEQGI*MFHRNR
Trigger: TCTGTTTCTGTGGAACATTCATATGCCCTGCTCCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGATACTTCAGCAGCATaGGCCCTGGAAATTTCGTTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDTSAA*ALEISL
Trigger: TAACGAAATTTCCAGGGCTCATGCTGCTGAAGTATC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTCCAAGGAAGGGTaGCATTCATTGTTTATGGGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILSKEG*HSLFMG
Trigger: CCCCATAAACAATGAATGTCACCCTTCCTTGGAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGGCTTGCAGCAGGTaGTACTTGCTTAATCAACTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKACSR*YLLNQL
Trigger: GAGTTGATTAAGCAAGTATCACCTGCTGCAAGCCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTGTTTCACATGTTaGCACATCTTGCAGCGTGTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILCFTC*HILQRV
Trigger: CACACGCTGCAAGATGTGTCAACATGTGAAACAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGTGCACACGTCTATaGTTATGTCTTCATAGGAGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWCTRL*LCLHRR
Trigger: CCTCCTATGAAGACATAATCATAGACGTGTGCACCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGTGTTGGAATCATTaGACCGTAAGTGGACCAAAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILCWNH*TVSGPK
Trigger: CTTTGGTCCACTTACGGTGCAATGATTCCAACACAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTGACAGGTTGTAGCTaGTTTCTGTTTCTGGGGTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILTGCS*FLFLGF
Trigger: GAACCCCAGAAACAGAAAGCAGCTACAACCTGTCAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGAAGCCACTCTTGTaGTATCCAGTGGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKKPLL*YPVAEQ
Trigger: TTGTTCAGCCACTGGATAGCACAAGAGTGGCTTCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTTCGGCAGAGACCTaGATTTGTTGTACCTGGGTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIISAET*ICCTWV
Trigger: TACCCAGGTACAACAAATGCAGGTCTCTGCCGAAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTTTTCCTTGGTGTCTaGTGTATTTTGGTAGGGACC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVFLGV*CILVGT
Trigger: GGTCCCTACCAAAATACAGCAGACACCAAGGAAAAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCAAGTCAAAACCACTaGGCAGTTTCCCCAAGAATG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSQNH*AVSPRM
Trigger: CATTCTTGGGGAAACTGCCCAGTGGTTTTGACTTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGCTGTTGTCTGCTCTaGAAGCAGTTCTTTTGGGAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISCCLL*KQFFWE
Trigger: TTCCCAAAAGAACTGCTTCCAGAGCAGACAACAGCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGATTTCTTCACAGGTaGCTTAGCCCTTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRFLHR*LSPWNS
Trigger: ACTGTTCCAAGGGCTAAGCCACCTGTGAAGAAATCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATTGTGAGCCGCTGTaGTATTTTCTGGTTGAACAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHCEPL*YFLVEH
Trigger: GTGTTCAACCAGAAAATACCACAGCGGCTCACAATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTAGCCTCAGATACTaGTGTGGAAGAAGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSLRY*CGRSSR
Trigger: TCTGCTACTTCTTCCACACCAGTATCTGAGGCTAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTCTTCTTGGGTGTCTaGATCACACTCTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVFLGV*ITLSCK
Trigger: TTTGCAAGAGAGTGTGATCCAGACACCCAAGAAGAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATGGGGCTGCCATGTTaGATAAGGTCCTGTAAAGTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIMGLPC*IRSCKV
Trigger: TACTTTACAGGACCTTATCCAACATGGCAGCCCCAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCGTGTCTCTTTAACTaGTACTGGAGGTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISCLFN*YWRFRT
Trigger: AGTCCTGAACCTCCAGTACCAGTTAAAGAGACACGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGTCACAGCCTGATATaGTCGTGTCTCTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISHSLI*SCLFNW
Trigger: CCAGTTAAAGAGACACGACCATATCAGGCTGTGACT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACACTTGGTGCAGTTGTaGAAACCAATGTGTCAGACA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHLVQL*KPMCQT
Trigger: TGTCTGACACATTGGTTTCCACAACTGCACCAAGTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGTGCCTGGACCTGTaGTTTCTTTATGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQCLDL*FLYVTQ
Trigger: CTGAGTTACATAAAGAAACCACAGGTCCAGGCACTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCAGGATGCAGAAATaGGGCCTCAGAGATTTTTGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICRMQK*GLRDFC
Trigger: ACAAAAATCTCTGAGGCCCCATTTCTGCATCCTGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGTTCAATTTCTGTATaGCCTCCTTTCCTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGSISV*PPFLRR
Trigger: CCTTCTGAGGAAAGGAGGCCATACAGAAATTGAACC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAATGTATACACCTTTaGCTGGATCACCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKCIHL*LDHPEW
Trigger: CCACTCTGGGTGATCCAGCCAAAGGTGTATACATTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATACCATGGTCTTGAATaGAGACAGTCGGAGTATTTG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIYHGLE*RQSEYL
Trigger: CAAATACTCCGACTGTCTTCATTCAAGACCATGGTA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCAAGTATGCTTTTATaGGCTGGTGGTGCCATAGTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSMLL*AGGAIV
Trigger: AACTATGGCACCACCAGCTCATAAAAGCATACTTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTCCATGGAGACATaGGAACATTTTCACTGCGTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILSMET*EHFHCV
Trigger: AACGCAGTGAAAATGTTCTCATGTCTCCATGGAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTGAAAGGAAATCCTaGGTGCATCTCACTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICERKS*VHLTSS
Trigger: TGAAGAAGTGAGATGCACTCAGGATTTCCTTTCACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGACTAGACGCTGGTaGTACTTCTTCAATTACAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRTRRW*YFFNYR
Trigger: TCTGTAATTGAAGAAGTATCACCAGCGTCTAGTCCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTGTTCTTCCTGGATaGTCAGTTAATATTAGAGGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPVLPG*SVNIRG
Trigger: GCCTCTAATATTAACTGATCATCCAGGAAGAACAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTCATCATGCTCACTTaGGACAATTTCCTCAGTTAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILIMLT*DNFLSY
Trigger: GTAACTGAGGAAATTGTCTCAAGTGAGCATGATGAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAATAAATGTAACCCATaGAGACCCATCTGCTTGCCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDINKCNP*RPICLP
Trigger: AGGCAAGCAGATGGGTCTGCATGGGTTACATTTATT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTCCAACAGAGAGTCTaGAGAACATTTTTCCAAACC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILQQRV*RTFFQT
Trigger: GGTTTGGAAAAATGTTCTGCAGACTCTCTGTTGGAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCCGGGTTAATCACTaGACACCCCATATTATCATC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFRVNH*TPHIII
Trigger: GATGATAATATGGGGTGTGCAGTGATTAACCCGGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAAGGAAATCCTGAGTaGATCTCACTTCTTCACTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKGNPE*ISLLHW
Trigger: CCAGTGAAGAAGTGAGATGCACTCAGGATTTCCTTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTGGGAGATTTGGTTaGTCTTCTCACACTGTGTAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIIGRFG*SSHTVY
Trigger: GTACACAGTGTGAGAAGAGCAACCAAATCTCCCAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACACTATACCACTTGGTaGAGTTGTGGAAACCAATGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHYTTW*SCGNQC
Trigger: ACATTGGTTTCCACAACTGCACCAAGTGGTATAGTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTCTTAGTTTGACGTaGAAATTGGTGCACACGTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLSLT*KLVHTS
Trigger: AGACGTGTGCACCAATTTGCACGTCAAACTAAGAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATATCACAAAGCCTCCTaGACGAAACAGTTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIYHKAS*TKQFLV
Trigger: TACCAAGAACTGTTTCGTGCAGGAGGCTTTGTGATA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCATTGCACCGTAAGTaGACCAAAGAGCTATATCAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISLHRK*TKELYH
Trigger: GTGATATAGCTCTTTGGTCCACTTACGGTGCAATGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTGCTTTCTGTTTCTaGGGTTCTCATTGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAAFCF*GSHCLL
Trigger: TAAAAGGCAATGAGAACCCCAGAAACAGAAAGCAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTTTGTCCCATTCCTaGGAAACAGAGGGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLSHS*ETEGLV
Trigger: TACTAAGCCCTCTGTTTCCCAGGAATGGGACAAAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGAGTTCCAAGCCTTaGGTAAGTGGTGTTTTAATG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQSSKP*VSGVLM
Trigger: CATTAAAACACCACTTACCCAAGGCTTGGAACTCTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAATTCTGGTCTTCTTaGGTGTCTGGATCACACTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKFWSS*VSGSHS
Trigger: AGAGTGTGATCCAGACACCCAAGAAGACCAGAATTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAACAGATGAAATTCTaGTCTTCTTGGGTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEQMKF*SSWVSG
Trigger: TCCAGACACCCAAGAAGACCAGAATTTCATCTGTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAAGGTGAGAGTAATTaGTTCCGGGTTAATCACTGC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKGESN*FRVNHC
Trigger: GCAGTGATTAACCCGGAACCAATTACTCTCACCTTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTTCTGACTCACATTaGGAGATTTGGTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSDSH*EIWLLF
Trigger: GAAGAGCAACCAAATCTCCCAATGTGAGTCAGAAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAAATGGAGGTTCACTaGACTCCAAGACAAGATGTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQMEVH*TPRQDV
Trigger: AACATCTTGTCTTGGAGTCCAGTGAACCTCCATTTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTTCTAGGACCAAATaGAGGTTCACTGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIISRTK*RFTGLQ
Trigger: TTGGAGTCCAGTGAACCTCCATTTGGTCCTAGAAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGTGCTTGAAACACTaGCTCTGCATTTATTGGTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILCLKH*LCIYWS
Trigger: AGACCAATAAATGCAGAGCCAGTGTTTCAAGCACAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCTACGTGCTCTGTaGCTATTCCACAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLRAL*LFHKQK
Trigger: CTTCTGTTTGTGGAATAGCCACAGAGCACGTAGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTCCAAATCCAGTCTaGGATTTCTACAATCACCAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPPNPV*DFYNHQ
Trigger: TTGGTGATTGTAGAAATCCCAGACTGGATTTGGAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTTGGTTGTTGTTGTaGAAGTTCAACGACGACTCA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISWLLL*KFNDDS
Trigger: TGAGTCGTCGTTGAACTTCCACAACAACAACCAAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGAGGACAGCAAACCTaGCATCAATATGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGGQQT*HQYAEF
Trigger: AAATTCAGCATATTGATGCCAGGTTTGCTGTCCTCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTGAAGCACAAATCTTaGAAACAGACTTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILKHKS*KQTFSS
Trigger: GGAGGAGAAAGTCTGTTTTCAAGATTTGTGCTTCAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTTTCATTCTATCCTaGGGAGCAACACTCAATGAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISFILS*GATLNE
Trigger: TTCATTGAGTGTTGCTCCTCAGGATAGAATGAAAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAATTCAGAGGAACAGTaGAGATTTCTAGCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDINSEEQ*RFLASD
Trigger: ATCTGAGGCTAGAAATCTTCACTGTTCCTCTGAATT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGAGCTACCCACATATaGAGTAAAAGCTTCACTTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRATHI*SKSFTS
Trigger: AGAAGTGAAGCTTTTACTTCATATGTGGGTAGCTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCGGGAAGATCGTATaGTTTTGTTCTGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFGKIV*FCSDCC
Trigger: ACAGCAATCAGAACAAAATCATACGATCTTCCCGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATGATAGTGCCTCCATaGCCATTGTTTTATCAGATG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIMIVPP*PLFYQM
Trigger: CATCTGATAAAACAATGGTCATGGAGGCACTATCAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGCAATGGATTTCCTaGTTTTACCAGTTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILQWIS*FYQFFR
Trigger: CCTGAAAAACTGGTAAAATCAGGAAATCCATTGCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTCTTATGTGCAGTTaGATCCACTCTTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLMCS*IHSFIF
Trigger: GAAGATGAAAGAGTGGATTCAACTGCACATAAGAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGCATCAATATGCTaGATTTGCAGGTTTAGCAAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILASIC*ICRFSK
Trigger: TTTGCTAAACCTGCAAATTCAGCATATTGATGCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAAACCATGCTCAGATaGAGAGTCCAAGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKTMLR*RVQVRS
Trigger: ACTTCTTACTTGGACTCTTCATCTGAGCATGGTTTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTATGAGCTGGTGGTaGCATAGTTTTAGATTCCCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFMSWW*HSFRFP
Trigger: AGGGAATCTAAAACTATGGCACCACCAGCTCATAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTAAAATCTAGTTCCTaGGGTAGCTGTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILKSSS*GSCVGI
Trigger: GATTCCAACACAGCTACCGCAGGAACTAGATTTTAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATATTTTGCTGGGTTaGTGTGTTCTACAACCTTTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHILLG*CVLQPF
Trigger: GAAAGGTTGTAGAACACAGCAACCCAGCAAAATATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCAGCAGGTGATACTTaGTTAATCAACTCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAAGDT*LINSFL
Trigger: TAAGAAGGAGTTGATTAAGCAAGTATCACCTGCTGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGATAAACCCTCATCATaGTCACTTGAGACAATTTCC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDKPSS*SLETIS
Trigger: GGAAATTGTCTCAAGTGAGCATGATGAGGGTTTATC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTTAGGGCTAGTCTaGTGTTTTACTGACACATTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLGLV*CFTDTF
Trigger: GAATGTGTCAGTAAAACAGCAGACTAGCCCTAAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCTCAATTTCTACGTaGTCTGTGGCTATTCCACAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFSIST*SVAIPQ
Trigger: TTGTGGAATAGCCACAGAGCACGTAGAAATTGAGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAACAGACAACTGCAATaGCACTGTGACATATTTCAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDINRQLQ*HCDIFQ
Trigger: CTGAAATATGTCACAGTGGCATTGCAGTTGTCTGTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGCTAACAGACAACTaGAATGCCACTGTGACATAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKLTDN*NATVTY
Trigger: ATATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAACAGAGCATAATGTaGATCGTATGCCTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKQSIM*IVCLSD
Trigger: GTCAGAAAGGCATACGATGCACATTATGCTCTGTTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGACAGTCGGAGTATTTaGAAATGTATACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDSRSI*KCIHLL
Trigger: AAGCAGGTGTATACATTTCCAAATACTCCGACTGTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTTTTATGAGCTGGTaGTGCCATAGTTTTAGATTC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAFMSW*CHSFRF
Trigger: GAATCTAAAACTATGGCACCACCAGCTCATAAAAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAAACAGAAGAGCTTTaGCTTGCATCTGAAGATTCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIETEEL*LASEDS
Trigger: AGAATCTTCAGATGCAAGCCAAAGCTCTTCTGTTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTCCAGTGGGTTGTTaGTATATTTGCTGTCTAAAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISPVGC*YICCLN
Trigger: GTTTAGACAGCAAATATACCAACAACCCACTGGAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGACACATATTTTGCTaGGTTGCTGTGTTCTACAAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRHIFC*VAVFYN
Trigger: GTTGTAGAACACAGCAACCCAGCAAAATATGTGTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAAGCCTTGGGTAAGTaGTGTTTTAATGAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQALGK*CFNERK
Trigger: CTTCCTTTCATTAAAACACCACTTACCCAAGGCTTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTCACTATACCACTTaGTGCAGTTGTGGAAACCAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIIHYTT*CSCGNQ
Trigger: TTGGTTTCCACAACTGCACCAAGTGGTATAGTGAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGACAGTCGGAGTATTTaGAAATGTATACACCTTTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDSRSI*KCIHLW
Trigger: CCAAAGGTGTATACATTTCCAAATACTCCGACTGTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGTATCACCTTCATTaGGATGTCATCTTCAACTTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRYHLH*DVIFNF
Trigger: AAAGTTGAAGATGACATCTCAATGAAGGTGATACCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTCTTTTTCTTTTCTaGGGAAACTGTCCTTTAACT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPLFLF*GNCPLT
Trigger: AGTTAAAGGACAGTTTCCTCAGAAAAGAAAAAGAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATATTGTAAGAACAGATaGAATTCTGGTCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIYCKNR*NSGLLG
Trigger: CCCAAGAAGACCAGAATTTCATCTGTTCTTACAATA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCCTCAGCTACATCCTaGAGTTCTAAATTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSATS*SSKFEN
Trigger: ATTCTCAAATTTAGAACTTCAGGATGTAGCTGAGGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTAAGATCTCTATTATaGCTACATCTCTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDILRSLL*LHLSLQ
Trigger: TTGGAGAGAGAGATGTAGTCATAATAGAGATCTTAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR TCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTATTTCAGTTTGTTaGGGTGGAATGAAACAGTGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICISVC*GGMKQC
Trigger: ACACTGTTTCATTCCACCTCAACAAACTGAAATACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCTCTTGTTTCCTTaGCCTTTTAGCATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLLFP*PFSICW
Trigger: CCAACAAATGCTAAAAGGGCAAGGAAACAAGAGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTTTTTGTTTGCACTaGTGCATCAAGAATATCCAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDICFCLH*CIKNIH
Trigger: GTGGATATTCTTGATGCAGCAGTGCAAACAAAAACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATGAAGTTTTAAAATaGATGGAGTCACAGCCTGAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHEVLK*MESQPD
Trigger: ATCAGGCTGTGACTCCATGCATTTTAAAACTTCATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATAATGTGCATCGTATaGCTTTCTGACATTAGCATG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIIMCIV*LSDISM
Trigger: CATGCTAATGTCAGAAAGGCATACGATGCACATTAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATATGCTTTTATGAGCTaGTGGTGCCATAGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIYAFMS*WCHSFR
Trigger: TCTAAAACTATGGCACCACCAGCTCATAAAAGCATA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGCATTTGTTGGCACTaGAACATCTTTAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISICWH*NIFRNR
Trigger: CCTATTTCTAAAGATGTTCCAGTGCCAACAAATGCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGAACAGTTTTGACTaGAGATTTCTCTTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWNSFD*RFLLFP
Trigger: AGGAAACAAGAGAAATCTCCAGTCAAAACTGTTCCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACGCTGTGGTATTTTCTaGTTGAACACTATTTATGCT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRCGIF*LNTIYA
Trigger: AGCATAAATAGTGTTCAACCAGAAAATACCACAGCG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGAAATGTATACACCTaGTTTTCAGTATCAAACAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGNVYT*FSVSNR
Trigger: TCTGTTTGATACTGAAAAGCAGGTGTATACATTTCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTTGTTTGCACTGCTaGATCAAGAATATCCACTTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFCLHC*IKNIHF
Trigger: AAAGTGGATATTCTTGATGCAGCAGTGCAAACAAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCTTTTTCTGTTATaGCTAAGTCTTCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFLFLL*LSLLTH
Trigger: GTGAGTCAGAAGACTTAGGCATAACAGAAAAAGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTATACTAACTGGCTaGAATGGATTTCCTGATTTT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISILTG*NGFPDF
Trigger: AAAATCAGGAAATCCATTGCAGCCAGTTAGTATAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCACCTGCAGATAAATaGCTTCATCTGTTTTCAAAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDISPADK*LHLFSN
Trigger: ATTTGAAAACAGATGAAGGCATTTATCTGCAGGTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR GCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATACCAATTTTGCCTaGTTTTCAGTATCAAACAGA +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHTNFA*FSVSNR
Trigger: TCTGTTTGATACTGAAAAGCAGGCAAAATTGGTATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACTAATGTGTTTGGATaGATTCTTTCTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDITNVFG*ILSSGS
Trigger: ACTTCCTGAAGAAAGAATCCATCCAAACACATTAGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CCA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGCTTTCTTCATCTTaGCTAACTGTTAAGTCTGAT +
Preference number: 4 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKLSSS*LTVKSD
Trigger: ATCAGACTTAACAGTTAGCCAAGATGAAGAAAGCTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp CGTCAGGGTCACGGGCAAGAGGCAACCCCGGGACGCCCGGCAGCCTaGGAGAACATGCCGACTTTCTCTCTGACCGGCGCTAGCAACCGG +
Preference number: 5 (lower is better)
Translates to: RQGHGQEATPGRPAA*ENMPTFSLTGASNR
Trigger: CCGGTTGCTAGCGCCGGTCAGAGAGAAAGTCGGCATGTTCTCGCAGGCTGCCGGGCGTCCCGGGGTTGCCTCTTGCCCGTGACCCTGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS CCA 90 bp TACCGCAGCAGTCCAGTGCCCGGGAGGGAGGCTCGTCTCCATGCCTaGAACCCAGCTAGAGCAGCCCCAGTCCTCTTGGTTGTTGTTGTG +
Preference number: 5 (lower is better)
Translates to: YRSSPVPGREARLHA*NPARAAPVLLVVVV
Trigger: CACAACAACAACCAAGAGGACTGGGGCTGCTCTAGCTGGGTTCCAGGCATGGAGACGAGCCTCCCTCCCGGGCACTGGACTGCTGCGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp CCAGACTGCTGGCTGTGTAGCCTCTCCTGGGCTGCCCCTGTGGTCTaGGATCTGACTCCACAACTGTTACCAGAAGGGGGCTTCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PDCWLCSLSWAAPVV*DLTPQLLPEGGFCS
Trigger: GGAGCAGAAGCCCCCTTCTGGTAACAGTTGTGGAGTCAGATCCCAGACCACAGGGGCAGCCCAGGAGAGGCTACACAGCCAGCAGTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp CCTGCCAAGTGCTTGTCCAGGAGCTGGGCAGGCCACAGTTTGCACTaGAACTCGGGTGCCTCCTCAGGCCGTGTGAAGTTCTCATGGTAT +
Preference number: 5 (lower is better)
Translates to: PAKCLSRSWAGHSLH*NSGASSGRVKFSWY
Trigger: ATACCATGAGAACTTCACACGGCCTGAGGAGGCACCCGAGTTTCAGTGCAAACTGTGGCCTGCCCAGCTCCTGGACAAGCACTTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp AGATACTCCAGGTCTAAAGTGTTCTGGGTGAGGTCGTCTGCCACCTaGCAAGTGCTTGTCCAGGAGCTGGGCAGGCCACAGTTTGCACTG +
Preference number: 5 (lower is better)
Translates to: RYSRSKVFWVRSSAT*QVLVQELGRPQFAL
Trigger: CAGTGCAAACTGTGGCCTGCCCAGCTCCTGGACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCTGGAGTATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp CTTGTCCAGGAGCTGGGCAGGCCACAGTTTGCACTGAAACTCGGGTaGCTCCTCAGGCCGTGTGAAGTTCTCATGGTATCTTTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LVQELGRPQFALKLG*LLRPCEVLMVSLSS
Trigger: AGAACTCAAAGATACCATGAGAACTTCACACGGCCTGAGGAGGCACCCGAGTTTCAGTGCAAACTGTGGCCTGCCCAGCTCCTGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGTTTTGTACCGTCCTaGGCGTGGCCGCCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISFVPS*AWPPPP
Trigger: CGGGGGCGGCGGCCACGCCAAGGACGGTACAAAACT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS TCA 90 bp GTTTATGTGCAAAACGCAGATACTCCAGGTCTAAAGTGTTCTGGGTaGGGTCGTCTGCCACCTGCCAAGTGCTTGTCCAGGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VYVQNADTPGLKCSG*GRLPPAKCLSRSWA
Trigger: TGCCCAGCTCCTGGACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCTGGAGTATCTGCGTTTTGCACATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp TTGGGAAAGGGGCGGCACAAGTTCACCTTTTTACTCTGCACCATGTaGGGCATGCTGGCCTTCCTCTTAGGCTGCACTCTCAGATTTGAC +
Preference number: 5 (lower is better)
Translates to: LGKGRHKFTFLLCTM*GMLAFLLGCTLRFD
Trigger: GTCAAATCTGAGAGTGCAGCCTAAGAGGAAGGCCAGCATGCCCCACATGGTGCAGAGTAAAAAGGTGAACTTGTGCCGCCCCTTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CCA 90 bp CTTGCAGCGTGTGGATGGCTTTGCGTTCACCTTTTAGAGAAGATGTaGTGTTGGACTGAGGGCCAGCAGTGCCTGGACCTGTGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LAACGWLCVHLLEKM*CWTEGQQCLDLWFL
Trigger: AAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCATCCACACGCTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGACGGTGGTCGATCCTaGGGCTTCACCACGGGGTCG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIDGGRS*GFTTGS
Trigger: CGACCCCGTGGTGAAGCCCAAGGATCGACCACCGTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCACCTGCCAAGTGCTaGTCCAGGAGCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPPAKC*SRSWAG
Trigger: GCCTGCCCAGCTCCTGGACAAGCACTTGGCAGGTGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp CACTTTGTTTTCAAGGGTGCCGTACACAGAGCTCTGACATATCACTaGCTGACTGCCAGGCCCATCGTAAGTCCTGGTGAATGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HFVFKGAVHRALTYH*LTARPIVSPGECGL
Trigger: CAAGCCACATTCACCAGGACTTACGATGGGCCTGGCAGTCAGCCAGTGATATGTCAGAGCTCTGTGTACGGCACCCTTGAAAACAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp GCGTGTGGATGGCTTTGCGTTCACCTTTTAGAGAAGATGTGGTGTTaGACTGAGGGCCAGCAGTGCCTGGACCTGTGGTTTCTTTATGTA +
Preference number: 5 (lower is better)
Translates to: ACGWLCVHLLEKMWC*TEGQQCLDLWFLYV
Trigger: TACATAAAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCATCCACACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp TGTTACCAGAAGGGGGCTTCTGCTCCTAGGTGCAGGATGCAGAAATaGGGCCTCAGAGATTTTTGTCGAAGGGAAAGCACCAATGGAGAT +
Preference number: 5 (lower is better)
Translates to: CYQKGASAPRCRMQK*GLRDFCRRESTNGD
Trigger: ATCTCCATTGGTGCTTTCCCTTCGACAAAAATCTCTGAGGCCCCATTTCTGCATCCTGCACCTAGGAGCAGAAGCCCCCTTCTGGTAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp GTTCACCTTTTAGAGAAGATGTGGTGTTGGACTGAGGGCCAGCAGTaGCTGGACCTGTGGTTTCTTTATGTAACTCAGCTTCAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: VHLLEKMWCWTEGQQ*LDLWFLYVTQLQAH
Trigger: GTGAGCCTGAAGCTGAGTTACATAAAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp TTTAGTTTATGTGCAAAACGCAGATACTCCAGGTCTAAAGTGTTCTaGGTGAGGTCGTCTGCCACCTGCCAAGTGCTTGTCCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FSLCAKRRYSRSKVF*VRSSATCQVLVQEL
Trigger: CAGCTCCTGGACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCTGGAGTATCTGCGTTTTGCACATAAACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAAGTCACCTGTGCATTaGGCAGCTGAGGCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIKSPVH*AAEAGW
Trigger: CCAGCCTGCCTCAGCTGCCAAATGCACAGGTGACTT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp CCACTGGGCAGTTTCCCCAAGAATGTAGGGTCTTTCATTCTATCCTaGGGAGCAACACTCAATGAAGGGCTTCTGTCCGCCTTGTACAAT +
Preference number: 5 (lower is better)
Translates to: PLGSFPKNVGSFILS*GATLNEGLLSALYN
Trigger: ATTGTACAAGGCGGACAGAAGCCCTTCATTGAGTGTTGCTCCTCAGGATAGAATGAAAGACCCTACATTCTTGGGGAAACTGCCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000532080.1
ENST00000645567.1
CDS TCA 90 bp TGGATGGCTTTGCGTTCACCTTTTAGAGAAGATGTGGTGTTGGACTaGGGGCCAGCAGTGCCTGGACCTGTGGTTTCTTTATGTAACTCA +
Preference number: 5 (lower is better)
Translates to: WMALRSPFREDVVLD*GPAVPGPVVSLCNS
Trigger: TGAGTTACATAAAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGAAGCAGTTCTTTaGGGAAAGGGGCGGCACAAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILEAVL*GKGRHK
Trigger: CTTGTGCCGCCCCTTTCCCAAAAGAACTGCTTCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGAGAGTCCGAGCTGTaGTCTGCTCTGGAAGCAGTT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGESEL*SALEAV
Trigger: AACTGCTTCCAGAGCAGACAACAGCTCGGACTCTCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp CATGTGGGGCATGCTGGCCTTCCTCTTAGGCTGCACTCTCAGATTTaGCGCTGGACTCAATGGAAAAACTCTCTTCTTTGCTTTCAACAT +
Preference number: 5 (lower is better)
Translates to: HVGHAGLPLRLHSQI*RWTQWKNSLLCFQH
Trigger: ATGTTGAAAGCAAAGAAGAGAGTTTTTCCATTGAGTCCAGCGTCAAATCTGAGAGTGCAGCCTAAGAGGAAGGCCAGCATGCCCCACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS GCA 90 bp CTCCATCAACCGAGGCAGCTGTCAAGGACTTCACCTGCAGATAAATaGCTTCATCTGTTTTCAAATCACCGGGAAAGAGATGGTTCTGAC +
Preference number: 5 (lower is better)
Translates to: LHQPRQLSRTSPADK*LHLFSNHRERDGSD
Trigger: GTCAGAACCATCTCTTTCCCGGTGATTTGAAAACAGATGAAGGCATTTATCTGCAGGTGAAGTCCTTGACAGCTGCCTCGGTTGATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp CTCAGCTTCAGGCTCACCATTCTTAAGCAAACTGGCCATTCTGCCTaGTGGTATTTCCTGTGCTTGAAACACTGGCTCTGCATTTATTGG +
Preference number: 5 (lower is better)
Translates to: LSFRLTILKQTGHSA*WYFLCLKHWLCIYW
Trigger: CCAATAAATGCAGAGCCAGTGTTTCAAGCACAGGAAATACCAGCAGGCAGAATGGCCAGTTTGCTTAAGAATGGTGAGCCTGAAGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp GAGGGACATCATGCATCTACCTACGACCAATCAAGCCATGTGGCTTaGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATTGCGTTGTAT +
Preference number: 5 (lower is better)
Translates to: EGHHASTYDQSSHVA*QAFHEFRVGLIALY
Trigger: ATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGCTTGATTGGTCGTAGGTAGATGCATGATGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 90 bp TCTAAGAGGGACATCATGCATCTACCTACGACCAATCAAGCCATGTaGCTTGGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATTGCGT +
Preference number: 5 (lower is better)
Translates to: SKRDIMHLPTTNQAM*LGKPFMNFEWALLR
Trigger: ACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGCTTGATTGGTCGTAGGTAGATGCATGATGTCCCTCTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTGCGGTAGCTGTGTaGGAATCATTGCACCGTAAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPAVAV*ESLHRK
Trigger: CTTACGGTGCAATGATTCCAACACAGCTACCGCAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGGGCCTCCTCAAATaGCTCTATTTCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWGLLK*LYFTSW
Trigger: CCAGCTGGTGAAATAGAGCAATTTGAGGAGGCCCCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGGTAAAGTTATCTaGCCCCACTGGATGGGTAGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILGKVI*PHWMGR
Trigger: CCTACCCATCCAGTGGGGCAAGATAACTTTACCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGGGATAGTAGGCTaGTCTGTTAGGAGGACAGCA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILGIVG*SVRRTA
Trigger: TGCTGTCCTCCTAACAGACAAGCCTACTATCCCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp TCTAGCATTTCCTCAGTAAGTGCTGACTGGGCTTTAGCAGGGGCCTaGCTACAAGGAACCAAGCTTTCTTCATCTTGGCTAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: SSISSVSADWALAGA*LQGTKLSSSWLTVK
Trigger: CTTAACAGTTAGCCAAGATGAAGAAAGCTTGGTTCCTTGTAGTCAGGCCCCTGCTAAAGCCCAGTCAGCACTTACTGAGGAAATGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp AAAGGAAGCAAGCAGTTAGGATCACGGAAGGATACTTCAGCAGCATaGGCCCTGGAAATTTCGTTAGTCTCCAACAGAGAGTCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: KGSKQLGSRKDTSAA*ALEISLVSNRESAE
Trigger: TTCTGCAGACTCTCTGTTGGAGACTAACGAAATTTCCAGGGCTCATGCTGCTGAAGTATCCTTCCGTGATCCTAACTGCTTGCTTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp CAGGCCACAGTTTGCACTGAAACTCGGGTGCCTCCTCAGGCCGTGTaGAGTTCTCATGGTATCTTTGAGTTCTTTTGTTATAGAGAAGTT +
Preference number: 5 (lower is better)
Translates to: QATVCTETRVPPQAV*SSHGIFEFFCYREV
Trigger: AACTTCTCTATAACAAAAGAACTCAAAGATACCATGAGAACTTCACACGGCCTGAGGAGGCACCCGAGTTTCAGTGCAAACTGTGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 90 bp AGCAGCATGAGCCCTGGAAATTTCGTTAGTCTCCAACAGAGAGTCTaGAGAACATTTTTCCAAACCAAGGGACTCCTCAATTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: SSMSPGNFVSLQQRV*RTFFQTKGLLNFTE
Trigger: CTCCGTGAAATTGAGGAGTCCCTTGGTTTGGAAAAATGTTCTGCAGACTCTCTGTTGGAGACTAACGAAATTTCCAGGGCTCATGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp AGCTTCAGGCTCACCATTCTTAAGCAAACTGGCCATTCTGCCTGCTaGTATTTCCTGTGCTTGAAACACTGGCTCTGCATTTATTGGTCT +
Preference number: 5 (lower is better)
Translates to: SFRLTILKQTGHSAC*YFLCLKHWLCIYWS
Trigger: AGACCAATAAATGCAGAGCCAGTGTTTCAAGCACAGGAAATACCAGCAGGCAGAATGGCCAGTTTGCTTAAGAATGGTGAGCCTGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTGCACTCTCAGATTaGACGCTGGACTCAATGGAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAALSD*TLDSME
Trigger: TTCCATTGAGTCCAGCGTCAAATCTGAGAGTGCAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGCTTCAGGGCTTTTaGTCCCATTCCTGGGAAACA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLQGF*SHSWET
Trigger: TGTTTCCCAGGAATGGGACAAAAAGCCCTGAAGCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTGGTGAATGTGGCTaGAGTAACAGTGCCACTGTA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPGECG*SNSATV
Trigger: TACAGTGGCACTGTTACTCAAGCCACATTCACCAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAATGTCCCTCAGGCCTaGTGTTCGTGCATTTTCCGA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDINVPQA*CSCIFR
Trigger: TCGGAAAATGCACGAACACAAGGCCTGAGGGACATT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTTACCAGGAAGGGTaGGTCTACCTGTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILYQEG*VYLFFL
Trigger: CAGGAAGAACAGGTAGACCAACCCTTCCTGGTAAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGTGTCTGCTGTATTTaGGTAGGGACCAGCACAAAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGVCCI*VGTSTK
Trigger: CTTTGTGCTGGTCCCTACCAAAATACAGCAGACACC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCCCAGTCCTCTTGGTaGTTGTTGTGGAAGTTCAAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPQSSW*LLWKFN
Trigger: GTTGAACTTCCACAACAACAACCAAGAGGACTGGGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCCTTTGGAAAGACATaGGCAGAGGAGGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISFGKT*AEEAEC
Trigger: GCATTCTGCCTCCTCTGCCAATGTCTTTCCAAAGGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGGCCTCAGAGATTTTaGTCGAAGGGAAAGCACCAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGPQRF*SKGKHQ
Trigger: TTGGTGCTTTCCCTTCGACAAAAATCTCTGAGGCCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGGCAGATACATCTCTaGAGCAGTGGCTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRQIHL*SSGFSR
Trigger: TCTGGAGAAGCCACTGCTCAAGAGATGTATCTGCCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTCTCTGTGGAAAGCTaGACAGAAGTGCTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILSVES*TEVLRF
Trigger: GAACCTCAGCACTTCTGTCAAGCTTTCCACAGAGAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp GTGAGAGCCACCTCTTCCGGTTCACCTATTTCCTCAGCTACATCCTaGAGTTCTAAATTTGAGAATGGGGCCTCCTCAAATTGCTCTATT +
Preference number: 5 (lower is better)
Translates to: VRATSSGSPISSATS*SSKFENGASSNCSI
Trigger: AATAGAGCAATTTGAGGAGGCCCCATTCTCAAATTTAGAACTTCAGGATGTAGCTGAGGAAATAGGTGAACCGGAAGAGGTGGCTCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTGTGTTGGAATCATaGCACCGTAAGTGGACCAAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIAVLES*HRKWTK
Trigger: TTTGGTCCACTTACGGTGCAATGATTCCAACACAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAAATTCTGGTCTTCTaGGGTGTCTGGATCACACTC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEILVF*GVWITL
Trigger: GAGTGTGATCCAGACACCCAAGAAGACCAGAATTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGTAAGAAGCCACTCTaGTGCTATCCAGTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDICKKPL*CYPVAE
Trigger: TTCAGCCACTGGATAGCACAAGAGTGGCTTCTTACA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTCACATTGGGAGATTaGGTTGCTCTTCTCACACTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILTLGD*VALLTL
Trigger: CAGTGTGAGAAGAGCAACCAAATCTCCCAATGTGAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGCAGAGACCTGCATTaGTTGTACCTGGGTAAAGTT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGRDLH*LYLGKV
Trigger: AACTTTACCCAGGTACAACAAATGCAGGTCTCTGCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATACCACTTGGTGCAGTaGTGGAAACCAATGTGTCAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIYHLVQ*WKPMCQ
Trigger: CTGACACATTGGTTTCCACAACTGCACCAAGTGGTA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGCGTGTGGATGGCTTaGCGTTCACCTTTTAGAGAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISVWMA*RSPFRE
Trigger: TTCTCTAAAAGGTGAACGCAAAGCCATCCACACGCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCCTCTTGGTTGTTGTaGTGGAAGTTCAACGACGAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSWLL*WKFNDD
Trigger: GTCGTCGTTGAACTTCCACAACAACAACCAAGAGGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGTCCTCTTGGTTGTaGTTGTGGAAGTTCAACGAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQSSWL*LWKFND
Trigger: GTCGTTGAACTTCCACAACAACAACCAAGAGGACTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAATGGAGATCTGGGTaGGTGACTCCTTTGGAAAGA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQWRSG*VTPLER
Trigger: TCTTTCCAAAGGAGTCACCAACCCAGATCTCCATTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAAATGTATACACCTTaGGCTGGATCACCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEMYTP*AGSPRV
Trigger: CACTCTGGGTGATCCAGCCAAAGGTGTATACATTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS TCA 90 bp AAGGAAAATCCAGCATCACAAATTCCGTCTGAAACACAAGGAGACTaGGGATGCTCTGCTAGCAAGTCCAAAGCAGTAGACACTTCCAAA +
Preference number: 5 (lower is better)
Translates to: KENPASQIPSETQGD*GCSASKSKAVDTSK
Trigger: TTTGGAAGTGTCTACTGCTTTGGACTTGCTAGCAGAGCATCCTCAGTCTCCTTGTGTTTCAGACGGAATTTGTGATGCTGGATTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS TCA 90 bp TTAATGCTAGATCGGCTAACATATTTAGGGCCTGGGAGTCATAGTTaGCGATGGAGTTTTCAGGAAGATCATTGTGAGCCGCTGTGGTAT +
Preference number: 5 (lower is better)
Translates to: LMLDRLTYLGPGSHS*RWSFQEDHCEPLWY
Trigger: ATACCACAGCGGCTCACAATGATCTTCCTGAAAACTCCATCGTCAACTATGACTCCCAGGCCCTAAATATGTTAGCCGATCTAGCATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS TCA 90 bp TACATAAGGACAGATCTGTCTGGGTCGTTCAATAACGGTGTTGCCTaGAAGTTCGTAAAAGTAATACTTTGGCTGGATCACCCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: YIRTDLSGSFNNGVA*KFVKVILWLDHPEW
Trigger: CCACTCTGGGTGATCCAGCCAAAGTATTACTTTTACGAACTTTCAGGCAACACCGTTATTGAACGACCCAGACAGATCTGTCCTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496681.5
CDS GCA 90 bp TCCGAGGTGGATACAGGATGTCTAAGGCTTGCAGCAGGTGATACTTaGTTAATCAACTCCTTCTTAAAGGTTGTACGTTCATCAGCAGTA +
Preference number: 5 (lower is better)
Translates to: SEVDTGCLRLAAGDT*LINSFLKVVRSSAV
Trigger: TACTGCTGATGAACGTACAACCTTTAAGAAGGAGTTGATTAAGCAAGTATCACCTGCTGCAAGCCTTAGACATCCTGTATCCACCTCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp GTAAGGAGCAGGGCATATGAATGTTCCACAGAAACAGAAGAGCTTTaGCTTGCATCTGAAGATTCTAGCATTTCCTCAGTAAGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: VRSRAYECSTETEEL*LASEDSSISSVSAD
Trigger: GTCAGCACTTACTGAGGAAATGCTAGAATCTTCAGATGCAAGCCAAAGCTCTTCTGTTTCTGTGGAACATTCATATGCCCTGCTCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp GTTAATATTAGAGGCATTTCGGCAGAGACCTGCATTTGTTGTACCTaGGTAAAGTTATCTTGCCCCACTGGATGGGTAGGACCAACAAAA +
Preference number: 5 (lower is better)
Translates to: VNIRGISAETCICCT*VKLSCPTGWVGPTK
Trigger: TTTTGTTGGTCCTACCCATCCAGTGGGGCAAGATAACTTTACCCAGGTACAACAAATGCAGGTCTCTGCCGAAATGCCTCTAATATTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp TCTGATAGGGACCCTGTCTCGATCTTCTCTAAGAGAGAATGTAGCTaGGAGGGTGGTCTTAATTCATTTTCACCAAGTATACCCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SDRDPVSIFSKRECS*EGGLNSFSPSIPSE
Trigger: TTCTGAGGGTATACTTGGTGAAAATGAATTAAGACCACCCTCCCAGCTACATTCTCTCTTAGAGAAGATCGAGACAGGGTCCCTATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000473789.5
ENST00000477043.5
ENST00000482419.1
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATGATACCATGGTCTaGAATGAAGACAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHDTMV*NEDSRS
Trigger: ACTCCGACTGTCTTCATTCAAGACCATGGTATCATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAATCTTTCACCCCTGTaGACAGGGGTGAACGAAATA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDINLSPL*TGVNEI
Trigger: TATTTCGTTCACCCCTGTCAACAGGGGTGAAAGATT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAAGCAGTTTCTCCTTaGACAGGTTGTAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEAVSP*TGCSCF
Trigger: AAAGCAGCTACAACCTGTCAAAGGAGAAACTGCTTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACAGAAGAGCTTTGGCTaGCATCTGAAGATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIQKSFG*HLKILA
Trigger: TGCTAGAATCTTCAGATGCAAGCCAAAGCTCTTCTG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATTGGGAGATTTGGTaGCTCTTCTCACACTGTGTA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHWEIW*LFSHCV
Trigger: TACACAGTGTGAGAAGAGCAACCAAATCTCCCAATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATTCACTATACCACTaGGTGCAGTTGTGGAAACCA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHSLYH*VQLWKP
Trigger: TGGTTTCCACAACTGCACCAAGTGGTATAGTGAATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTTTGTTTCACATGTaGACACATCTTGCAGCGTGT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPLFHM*THLAAC
Trigger: ACACGCTGCAAGATGTGTCAACATGTGAAACAAAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGCACGAAACAGTTCTaGGTAGGTGTGATCAAGAAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDICTKQF*VGVIKN
Trigger: GTTCTTGATCACACCTACCAAGAACTGTTTCGTGCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp TGCATTTTCCGAGGTGGATACAGGATGTCTAAGGCTTGCAGCAGGTaGTACTTGCTTAATCAACTCCTTCTTAAAGGTTGTACGTTCATC +
Preference number: 5 (lower is better)
Translates to: CIFRGGYRMSKACSR*YLLNQLLLKGCTFI
Trigger: GATGAACGTACAACCTTTAAGAAGGAGTTGATTAAGCAAGTATCACCTGCTGCAAGCCTTAGACATCCTGTATCCACCTCGGAAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGACAGTCGGAGTATTaGGAAATGTATACACCTGCT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRQSEY*EMYTPA
Trigger: AGCAGGTGTATACATTTCCAAATACTCCGACTGTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCCCCTTGTCTGTTaGACAGTTCTACCTCATACA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFPLVC*TVLPHT
Trigger: TGTATGAGGTAGAACTGTCAAACAGACAAGGGGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGTTTTCTCCAGTGGGTaGTTGGTATATTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIVFSSG*LVYLLS
Trigger: AGACAGCAAATATACCAACAACCCACTGGAGAAAAC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACAGAGTTCCAAGCCTaGGGTAAGTGGTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDITEFQA*GKWCFN
Trigger: ATTAAAACACCACTTACCCAAGGCTTGGAACTCTGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGAAGGTCCATTAGTTaGTGTACTTCCAATACCCGA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRRSIS*CTSNTR
Trigger: TCGGGTATTGGAAGTACACAAACTAATGGACCTTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCAAGAATATCCACTTaGTTTTCAAGGGTGCCGTAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISRIST*FSRVPY
Trigger: GTACGGCACCCTTGAAAACAAAGTGGATATTCTTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGATATACTGACACATaGTCAGCAGAACTCACTTCT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGYTDT*SAELTS
Trigger: AGAAGTGAGTTCTGCTGACAATGTGTCAGTATATCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGAGACCTGCATTTGTaGTACCTGGGTAAAGTTATC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRDLHL*YLGKVI
Trigger: GATAACTTTACCCAGGTACAACAAATGCAGGTCTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACCTCATCATGCTCACTaGAGACAATTTCCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIPHHAH*RQFPQL
Trigger: TAACTGAGGAAATTGTCTCAAGTGAGCATGATGAGG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATGGGTTAATGTAGCATaGTCTGAGGAAGAACAAAGC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIWVNVA*SEEEQS
Trigger: GCTTTGTTCTTCCTCAGACAATGCTACATTAACCCA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTACTGAGGTTTTCCTaGGTGTCTGCTGTATTTTGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLRFS*VSAVFW
Trigger: CCAAAATACAGCAGACACCAAGGAAAACCTCAGTAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGTTTGACGTGCAAATaGGTGCACACGTCTATGATT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISLTCK*VHTSMI
Trigger: AATCATAGACGTGTGCACCAATTTGCACGTCAAACT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACAACACTTCTTAGTTaGACGTGCAAATTGGTGCAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDITTLLS*TCKLVH
Trigger: GTGCACCAATTTGCACGTCAAACTAAGAAGTGTTGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp AAAGAGATGGTTCTGACTGCTTTTAGGGCTAGTCTGCTGTTTTACTaGCACATTCACTATACCACTTGGTGCAGTTGTGGAAACCAATGT +
Preference number: 5 (lower is better)
Translates to: KEMVLTAFRASLLFY*HIHYTTWCSCGNQC
Trigger: ACATTGGTTTCCACAACTGCACCAAGTGGTATAGTGAATGTGTCAGTAAAACAGCAGACTAGCCCTAAAAGCAGTCAGAACCATCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp AATCTAGTTCCTGCGGTAGCTGTGTTGGAATCATTGCACCGTAAGTaGACCAAAGAGCTATATCACATAGCATACGGTCTTGAACAATTA +
Preference number: 5 (lower is better)
Translates to: NLVPAVAVLESLHRK*TKELYHIAYGLEQL
Trigger: TAATTGTTCAAGACCGTATGCTATGTGATATAGCTCTTTGGTCCACTTACGGTGCAATGATTCCAACACAGCTACCGCAGGAACTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 90 bp ACCAATCAAGCCATGTGGCTTGGCAAGCCTTTCATGAATTTCGAGTaGGCCTTATTGCGTTGTATATTTGTAGAGCAATGCACATCTATA +
Preference number: 5 (lower is better)
Translates to: TNQAMWLGKPFMNFE*ALLRCIFVEQCTSI
Trigger: TATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGCTTGATTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACGATCTTCTAAGCATTaGATGATTGCCAATTGCTTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRSSKH*MIANCL
Trigger: CAAGCAATTGGCAATCATCAAATGCTTAGAAGATCG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAGCAAAACATCATTTaGTGGCAATTCAGAGGAACA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEQNII*WQFRGT
Trigger: TGTTCCTCTGAATTGCCACAAAATGATGTTTTGCTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGGGTTGTTGGTATATTaGCTGTCTAAACTGAATGCA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIGLLVY*LSKLNA
Trigger: TGCATTCAGTTTAGACAGCAAATATACCAACAACCC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCTCCAGTGGGTTGTaGGTATATTTGCTGTCTAAA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFSSGL*VYLLSK
Trigger: TTTAGACAGCAAATATACCAACAACCCACTGGAGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACATATTTTGCTGGGTaGCTGTGTTCTACAACCTTT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDITYFAG*LCSTTF
Trigger: AAAGGTTGTAGAACACAGCAACCCAGCAAAATATGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGGCTCTGCATTTATaGGTCTTACATAATGGGTTA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILALHL*VLHNGL
Trigger: TAACCCATTATGTAAGACCAATAAATGCAGAGCCAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGAATTTCTGCTTTTGTaGATGATCGAGAGTCACACT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIEFLLL*MIESHT
Trigger: AGTGTGACTCTCGATCATCAACAAAAGCAGAAATTC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCAGAATTTCTGCTTTaGTTGATGATCGAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISEFLL*LMIESH
Trigger: GTGACTCTCGATCATCAACAAAAGCAGAAATTCTGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTTCACCAAAGTCACTaGACTGTACTGAAAACCATG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFHQSH*TVLKTM
Trigger: CATGGTTTTCAGTACAGTCAAGTGACTTTGGTGAAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAAGACAGTCGGAGTATTaGGAAATGTATACACCTTTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIRQSEY*EMYTPL
Trigger: CAAAGGTGTATACATTTCCAAATACTCCGACTGTCT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645567.1
CDS TCA 90 bp ACACTCAATGAAGGGCTTCTGTCCGCCTTGTACAATTCTTGGAAATaGCGCTTTACTAATGTGTTTGGATGGATTCTTTCTTCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: TLNEGLLSALYNSWK*RFTNVFGWILSSGS
Trigger: ACTTCCTGAAGAAAGAATCCATCCAAACACATTAGTAAAGCGTCATTTCCAAGAATTGTACAAGGCGGACAGAAGCCCTTCATTGAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000532080.1
ENST00000645567.1
CDS GCA 90 bp ATGAATTTCGAGTGGGCCTTATTGCGTTGTATATTTGTAGAGCAATaGACATCTATACTTCTCATACCTTGTGGGCAGATAATCGCCAAC +
Preference number: 5 (lower is better)
Translates to: MNFEWALLRCIFVEQ*TSILLIPCGQIIAN
Trigger: GTTGGCGATTATCTGCCCACAAGGTATGAGAAGTATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 90 bp GATGGAGTTTTCAGGAAGATCATTGTGAGCCGCTGTGGTATTTTCTaGTTGAACACTATTTATGCTAATCCCATCTTCTTGACAACCTCT +
Preference number: 5 (lower is better)
Translates to: DGVFRKIIVSRCGIF*LNTIYANPIFLTTS
Trigger: AGAGGTTGTCAAGAAGATGGGATTAGCATAAATAGTGTTCAACCAGAAAATACCACAGCGGCTCACAATGATCTTCCTGAAAACTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CCA 90 bp TGGTGTAACTACCTCTTAAAGTATAAGAATCCTCCAAATCCAGTCTaGGATTTCTACAATCACCAAGCAGGTCTAGATCAGAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: WCNYLLKYKNPPNPV*DFYNHQAGLDQNLQ
Trigger: CTGGAGATTCTGATCTAGACCTGCTTGGTGATTGTAGAAATCCCAGACTGGATTTGGAGGATTCTTATACTTTAAGAGGTAGTTACACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTGAAGCACAAATCTaGAAAACAGACTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIIEAQI*KTDFLL
Trigger: GAGGAGAAAGTCTGTTTTCAAGATTTGTGCTTCAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAGCTTTACTAATGTGTTaGGATGGATTCTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIALLMC*DGFFLQ
Trigger: CTGAAGAAAGAATCCATCCAAACACATTAGTAAAGC...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAATTTACTCTCTGTTTTaGTGGAGATTTCTTCACAGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIIYSLF*WRFLHR
Trigger: CCTGTGAAGAAATCTCCACAAAAACAGAGAGTAAAT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACATTCAATAGCTCCTTaGTTTCACATGTTGACACAT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIHSIAP*FHMLTH
Trigger: ATGTGTCAACATGTGAAACAAAGGAGCTATTGAATG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTGTATTTCAGTTTGTaGAGGTGGAATGAAACAGTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILYFSL*RWNETV
Trigger: CACTGTTTCATTCCACCTCAACAAACTGAAATACAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTGTTGTATTTCAGTTaGTTGAGGTGGAATGAAACA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILLYFS*LRWNET
Trigger: TGTTTCATTCCACCTCAACAAACTGAAATACAACAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATTCTTCATCACCTTGTaGAATTCAGCATACTCATTG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDIFFITL*NSAYSL
Trigger: CAATGAGTATGCTGAATTCAACAAGGTGATGAAGAA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTATTCTTCATCACCTaGTTGAATTCAGCATACTCA +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILFFIT*LNSAYS
Trigger: TGAGTATGCTGAATTCAACAAGGTGATGAAGAATAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATACTTACAAAGAATGATTaGTCTTCTGTTTCGACAAGG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDILTKND*SSVSTR
Trigger: CCTTGTCGAAACAGAAGACAAATCATTCTTTGTAAG...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATAACAGCTTCTAGTATCTaGTCATCTGATATCACAAAG +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDITASSI*SSDITK
Trigger: CTTTGTGATATCAGATGACAAGATACTAGAAGCTGT...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS-3UTR CAA 90 bp TATCTAGCACTGCAACCCAAAGCTAACAGACAACTGCAATGCCACTGTGACATATCTTCTTATGTGCAGTaGAATCCACTCTTTCATCTT +
Preference number: 5 (lower is better)
Translates to: YLALQPKANRQLQCHCDISSYVQ*NPLFHL
Trigger: AAGATGAAAGAGTGGATTCAACTGCACATAAGAAGA...TATGTCACAGTGGCATTGCAGTTGTCTGTTAGCTTTGGGTTGCAGTGCTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp GTCCAAATTTCTATTCTCTATACTAACTGGCTGCAATGGATTTCCTaGTTTTACCAGTTTTTCAGGAGAAGGACTGAAGTCACCTGTGCA +
Preference number: 5 (lower is better)
Translates to: VQISILYTNWLQWIS*FYQFFRRRTEVTCA
Trigger: TGCACAGGTGACTTCAGTCCTTCTCCTGAAAAACTGGTAAAATCAGGAAATCCATTGCAGCCAGTTAGTATAGAGAATAGAAATTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp TATCTAACTTTGACATTCCTAGAGCTGACCAATTTTGGCATTAACTaGGTAAAATGCGCCTGTGAATTACCTGTTAGGAGGACAGCAAAC +
Preference number: 5 (lower is better)
Translates to: YLTLTFLELTNFGIN*VKCACELPVRRTAN
Trigger: GTTTGCTGTCCTCCTAACAGGTAATTCACAGGCGCATTTTACTCAGTTAATGCCAAAATTGGTCAGCTCTAGGAATGTCAAAGTTAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487196.1
CDS TCA 90 bp ATAGCATACGGTCTTGAACAATTAATTTCCCTTTCCATGGAGACATaGGAACATTTTCACTGCGTTCAAGTATGCTTTTATGAGCTGGTG +
Preference number: 5 (lower is better)
Translates to: IAYGLEQLISLSMET*EHFHCVQVCFYELV
Trigger: CACCAGCTCATAAAAGCATACTTGAACGCAGTGAAAATGTTCTCATGTCTCCATGGAAAGGGAAATTAATTGTTCAAGACCGTATGCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp TCAAACGCTTCCAAATTCATATTTTCAGTGTTTGGACCATTCTTGTaGTTCTTCCTTAGTTCTAAAGAGTCACCTGATGTGTGGCATCCT +
Preference number: 5 (lower is better)
Translates to: SNASKFIFSVFGPFL*FFLSSKESPDVWHP
Trigger: AGGATGCCACACATCAGGTGACTCTTTAGAACTAAGGAAGAATCACAAGAATGGTCCAAACACTGAAAATATGAATTTGGAAGCGTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp GCTGACCTCTCTACTCACAGACAGGCTTGTTTGTTTGATAAATACTaGATCAAACGCTTCCAAATTCATATTTTCAGTGTTTGGACCATT +
Preference number: 5 (lower is better)
Translates to: ADLSTHRQACLFDKY*IKRFQIHIFSVWTI
Trigger: AATGGTCCAAACACTGAAAATATGAATTTGGAAGCGTTTGATTCAGTATTTATCAAACAAACAAGCCTGTCTGTGAGTAGAGAGGTCAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 90 bp ATTCTTAGGACTTTTTCTTGCCTTCAGTTTAACCATTCAAACTCATaGGTTCCTCTGCCTTTCTTCTTGACGTTCTTTTTCATGACACAC +
Preference number: 5 (lower is better)
Translates to: ILRTFSCLQFNHSNS*VPLPFFLTFFFMTH
Trigger: GTGTGTCATGAAAAAGAACGTCAAGAAGAAAGGCAGAGGAACTCATGAGTTTGAATGGTTAAACTGAAGGCAAGAAAAAGTCCTAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS TCA 72 bp GTACCGTCCTTGGCGTGGCCGCCGCCCCCGAGGACCTaGGATCCCGGCTCGGCCTCCTTCCCATGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VPSLAWPPPPRT*DPGSASFPCFS
Trigger: GGAGAAGCATGGGAAGGAGGCCGAGCCGGGATCTCAGGTCCTCGGGGGCGGCGGCCACGCCAAGGACGGTAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000480839.6
ENST00000496681.5
CDS TCA 72 bp ATGCCGTCCTTGGCGTGGCCGCCGCCCCCGAGGACCTaGGATCCCGGCTCGGCCTCCTTCCCATGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: MPSLAWPPPPRT*DPGSASFPCFS
Trigger: GGAGAAGCATGGGAAGGAGGCCGAGCCGGGATCTCAGGTCCTCGGGGGCGGCGGCCACGCCAAGGACGGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473789.5
ENST00000477043.5
CDS GCA 72 bp CACGGGCAAGAGGCAACCCCGGGACGCCCGGCAGCCTaGGAGAACATGCCGACTTTCTCTCTGACCGGCGCT +
Preference number: 6 (lower is better)
Translates to: HGQEATPGRPAA*ENMPTFSLTGA
Trigger: AGCGCCGGTCAGAGAGAAAGTCGGCATGTTCTCGCAGGCTGCCGGGCGTCCCGGGGTTGCCTCTTGCCCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328090.9
CDS CCA 72 bp AGTCCAGTGCCCGGGAGGGAGGCTCGTCTCCATGCCTaGAACCCAGCTAGAGCAGCCCCAGTCCTCTTGGTT +
Preference number: 6 (lower is better)
Translates to: SPVPGREARLHA*NPARAAPVLLV
Trigger: AACCAAGAGGACTGGGGCTGCTCTAGCTGGGTTCCAGGCATGGAGACGAGCCTCCCTCCCGGGCACTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TGGCTGTGTAGCCTCTCCTGGGCTGCCCCTGTGGTCTaGGATCTGACTCCACAACTGTTACCAGAAGGGGGC +
Preference number: 6 (lower is better)
Translates to: WLCSLSWAAPVV*DLTPQLLPEGG
Trigger: GCCCCCTTCTGGTAACAGTTGTGGAGTCAGATCCCAGACCACAGGGGCAGCCCAGGAGAGGCTACACAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp AGGTCTAAAGTGTTCTGGGTGAGGTCGTCTGCCACCTaGCAAGTGCTTGTCCAGGAGCTGGGCAGGCCACAG +
Preference number: 6 (lower is better)
Translates to: RSKVFWVRSSAT*QVLVQELGRPQ
Trigger: CTGTGGCCTGCCCAGCTCCTGGACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp CGGTGGTCGATCCTTGGGCTTCACCACGGGGTCGTCAGGAGGCTTTaGCTGAAGCAAAAGGCCGGGCTGATGCCGAAATGGCATGACTTT +
Preference number: 6 (lower is better)
Translates to: RWSILGLHHGVVRRL*LKQKAGLMPKWHDF
Trigger: AAAGTCATGCCATTTCGGCATCAGCCCGGCCTTTTGCTTCAGCAAAAGCCTCCTGACGACCCCGTGGTGAAGCCCAAGGATCGACCACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp TACATCTCTCTCTCCAAGAGGAAGAGCTGTCCAGACTaGTGGCTGTGTAGCCTCTCCTGGGCTGCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: YISLSKRKSCPD*WLCSLSWAAPV
Trigger: CACAGGGGCAGCCCAGGAGAGGCTACACAGCCAGCAGTCTGGACAGCTCTTCCTCTTGGAGAGAGAGATGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GGGCGGCACAAGTTCACCTTTTTACTCTGCACCATGTaGGGCATGCTGGCCTTCCTCTTAGGCTGCACTCTC +
Preference number: 6 (lower is better)
Translates to: GRHKFTFLLCTM*GMLAFLLGCTL
Trigger: GAGAGTGCAGCCTAAGAGGAAGGCCAGCATGCCCCACATGGTGCAGAGTAAAAAGGTGAACTTGTGCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CCA 72 bp GCCGGGCTGATGCCGAAATGGCATGACTTTCCCCACTaGGGTTGCTGCTTCAGGGCTTTTTGTCCCATTCCT +
Preference number: 6 (lower is better)
Translates to: AGLMPKWHDFPH*GCCFRAFCPIP
Trigger: AGGAATGGGACAAAAAGCCCTGAAGCAGCAACCCCAGTGGGGAAAGTCATGCCATTTCGGCATCAGCCCGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp GCTCGTCTCCATGCCTGGAACCCAGCTAGAGCAGCCCCAGTCCTCTaGGTTGTTGTTGTGGAAGTTCAACGACGACTCATAGCCATCTGT +
Preference number: 6 (lower is better)
Translates to: ARLHAWNPARAAPVL*VVVVEVQRRLIAIC
Trigger: ACAGATGGCTATGAGTCGTCGTTGAACTTCCACAACAACAACCAAGAGGACTGGGGCTGCTCTAGCTGGGTTCCAGGCATGGAGACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp CAAAACGCAGATACTCCAGGTCTAAAGTGTTCTGGGTaGGGTCGTCTGCCACCTGCCAAGTGCTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: QNADTPGLKCSG*GRLPPAKCLSR
Trigger: CCTGGACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCTGGAGTATCTGCGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TTCAAGGGTGCCGTACACAGAGCTCTGACATATCACTaGCTGACTGCCAGGCCCATCGTAAGTCCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: FKGAVHRALTYH*LTARPIVSPGE
Trigger: TTCACCAGGACTTACGATGGGCCTGGCAGTCAGCCAGTGATATGTCAGAGCTCTGTGTACGGCACCCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TGTGGATGGCTTTGCGTTCACCTTTTAGAGAAGATGTaGTGTTGGACTGAGGGCCAGCAGTGCCTGGACCTG +
Preference number: 6 (lower is better)
Translates to: CGWLCVHLLEKM*CWTEGQQCLDL
Trigger: CAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCATCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp AAGGGGGCTTCTGCTCCTAGGTGCAGGATGCAGAAATaGGGCCTCAGAGATTTTTGTCGAAGGGAAAGCACC +
Preference number: 6 (lower is better)
Translates to: KGASAPRCRMQK*GLRDFCRREST
Trigger: GGTGCTTTCCCTTCGACAAAAATCTCTGAGGCCCCATTTCTGCATCCTGCACCTAGGAGCAGAAGCCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp CACTGGCTGACTGCCAGGCCCATCGTAAGTCCTGGTGAATGTGGCTaGAGTAACAGTGCCACTGTAAGAAGCCACTCTTGTGCTATCCAG +
Preference number: 6 (lower is better)
Translates to: HWLTARPIVSPGECG*SNSATVRSHSCAIQ
Trigger: CTGGATAGCACAAGAGTGGCTTCTTACAGTGGCACTGTTACTCAAGCCACATTCACCAGGACTTACGATGGGCCTGGCAGTCAGCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TGGTGTTGGACTGAGGGCCAGCAGTGCCTGGACCTGTaGTTTCTTTATGTAACTCAGCTTCAGGCTCACCAT +
Preference number: 6 (lower is better)
Translates to: WCWTEGQQCLDL*FLYVTQLQAHH
Trigger: ATGGTGAGCCTGAAGCTGAGTTACATAAAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TGGCTTTGCGTTCACCTTTTAGAGAAGATGTGGTGTTaGACTGAGGGCCAGCAGTGCCTGGACCTGTGGTTT +
Preference number: 6 (lower is better)
Translates to: WLCVHLLEKMWC*TEGQQCLDLWF
Trigger: AAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TGTGCAAAACGCAGATACTCCAGGTCTAAAGTGTTCTaGGTGAGGTCGTCTGCCACCTGCCAAGTGCTTGTC +
Preference number: 6 (lower is better)
Translates to: CAKRRYSRSKVF*VRSSATCQVLV
Trigger: GACAAGCACTTGGCAGGTGGCAGACGACCTCACCCAGAACACTTTAGACCTGGAGTATCTGCGTTTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp CATGCCTGGAACCCAGCTAGAGCAGCCCCAGTCCTCTaGGTTGTTGTTGTGGAAGTTCAACGACGACTCATA +
Preference number: 6 (lower is better)
Translates to: HAWNPARAAPVL*VVVVEVQRRLI
Trigger: TATGAGTCGTCGTTGAACTTCCACAACAACAACCAAGAGGACTGGGGCTGCTCTAGCTGGGTTCCAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp GGCGTAAGTCCTGAGGATCCCGTGGAGATCTCGGATTaGGACGTAAGGCGGCACACACTTCTCTTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: GVSPEDPVEISD*DVRRHTLLFFL
Trigger: AAGAAAGAAGAGAAGTGTGTGCCGCCTTACGTCCAAATCCGAGATCTCCACGGGATCCTCAGGACTTACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp GTTGTTGGAGAGTCCGAGCTGTTGTCTGCTCTGGAAGCAGTTCTTTaGGGAAAGGGGCGGCACAAGTTCACCTTTTTACTCTGCACCATG +
Preference number: 6 (lower is better)
Translates to: VVGESELLSALEAVL*GKGRHKFTFLLCTM
Trigger: CATGGTGCAGAGTAAAAAGGTGAACTTGTGCCGCCCCTTTCCCAAAAGAACTGCTTCCAGAGCAGACAACAGCTCGGACTCTCCAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CCA 72 bp CTGGGGTTGCTGCTTCAGGGCTTTTTGTCCCATTCCTaGGAAACAGAGGGCTTAGTATCTCTCTCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: LGLLLQGFLSHS*ETEGLVSLSPV
Trigger: TACAGGAGAGAGAGATACTAAGCCCTCTGTTTCCCAGGAATGGGACAAAAAGCCCTGAAGCAGCAACCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp GAGTCCGAGCTGTTGTCTGCTCTGGAAGCAGTTCTTTaGGGAAAGGGGCGGCACAAGTTCACCTTTTTACTC +
Preference number: 6 (lower is better)
Translates to: ESELLSALEAVL*GKGRHKFTFLL
Trigger: GAGTAAAAAGGTGAACTTGTGCCGCCCCTTTCCCAAAAGAACTGCTTCCAGAGCAGACAACAGCTCGGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CAA 90 bp AGGGACCAGCACAAAGGGAGGAAACCCCGACATTCAATAGCTCCTTaGTTTCACATGTTGACACATCTTGCAGCGTGTGGATGGCTTTGC +
Preference number: 6 (lower is better)
Translates to: RDQHKGRKPRHSIAP*FHMLTHLAACGWLC
Trigger: GCAAAGCCATCCACACGCTGCAAGATGTGTCAACATGTGAAACAAAGGAGCTATTGAATGTCGGGGTTTCCTCCCTTTGTGCTGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp TCCTCAGTAAGTGCTGACTGGGCTTTAGCAGGGGCCTaGCTACAAGGAACCAAGCTTTCTTCATCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: SSVSADWALAGA*LQGTKLSSSWL
Trigger: TAGCCAAGATGAAGAAAGCTTGGTTCCTTGTAGTCAGGCCCCTGCTAAAGCCCAGTCAGCACTTACTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp GAGGCTGACCGTCCTGGGAAAGGCAGATACATCTCTTaGGCAGTGGCTTCTCCAGAAACATCATTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: EADRPGKGRYIS*AVASPETSFSS
Trigger: AGAGCTAAATGATGTTTCTGGAGAAGCCACTGCTCAAGAGATGTATCTGCCTTTCCCAGGACGGTCAGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp AGGCTCACCATTCTTAAGCAAACTGGCCATTCTGCCTaGTGGTATTTCCTGTGCTTGAAACACTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RLTILKQTGHSA*WYFLCLKHWLC
Trigger: GCAGAGCCAGTGTTTCAAGCACAGGAAATACCAGCAGGCAGAATGGCCAGTTTGCTTAAGAATGGTGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GACATCATGCATCTACCTACGACCAATCAAGCCATGTaGCTTGGCAAGCCTTTCATGAATTTCGAGTGGGCC +
Preference number: 6 (lower is better)
Translates to: DIMHLPTTNQAM*LGKPFMNFEWA
Trigger: GGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGCTTGATTGGTCGTAGGTAGATGCATGATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 72 bp AGTTTTTCAGGAGAAGGACTGAAGTCACCTGTGCATTaGGCAGCTGAGGCAGGCTGGTTTAACTCCCTACCA +
Preference number: 6 (lower is better)
Translates to: SFSGEGLKSPVH*AAEAGWFNSLP
Trigger: TGGTAGGGAGTTAAACCAGCCTGCCTCAGCTGCCAAATGCACAGGTGACTTCAGTCCTTCTCCTGAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp CTCTTTACTGAGGTTTTCCTTGGTGTCTGCTGTATTTaGGTAGGGACCAGCACAAAGGGAGGAAACCCCGAC +
Preference number: 6 (lower is better)
Translates to: LFTEVFLGVCCI*VGTSTKGGNPD
Trigger: GTCGGGGTTTCCTCCCTTTGTGCTGGTCCCTACCAAAATACAGCAGACACCAAGGAAAACCTCAGTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp CCAGCATCACAAATTCCGTCTGAAACACAAGGAGACTaGGGATGCTCTGCTAGCAAGTCCAAAGCAGTAGAC +
Preference number: 6 (lower is better)
Translates to: PASQIPSETQGD*GCSASKSKAVD
Trigger: GTCTACTGCTTTGGACTTGCTAGCAGAGCATCCTCAGTCTCCTTGTGTTTCAGACGGAATTTGTGATGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS TCA 72 bp CATGCTGGCCTTCCTCTTAGGCTGCACTCTCAGATTTaGCGCTGGACTCAATGGAAAAACTCTCTTCTTTGC +
Preference number: 6 (lower is better)
Translates to: HAGLPLRLHSQI*RWTQWKNSLLC
Trigger: GCAAAGAAGAGAGTTTTTCCATTGAGTCCAGCGTCAAATCTGAGAGTGCAGCCTAAGAGGAAGGCCAGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS GCA 72 bp TTAGAGAAGATGTGGTGTTGGACTGAGGGCCAGCAGTaGCTGGACCTGTGGTTTCTTTATGTAACTCAGCTT +
Preference number: 6 (lower is better)
Translates to: LEKMWCWTEGQQ*LDLWFLYVTQL
Trigger: AAGCTGAGTTACATAAAGAAACCACAGGTCCAGGCACTGCTGGCCCTCAGTCCAACACCACATCTTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GGGCCTCAGAGATTTTTGTCGAAGGGAAAGCACCAATaGAGATCTGGGTTGGTGACTCCTTTGGAAAGACAT +
Preference number: 6 (lower is better)
Translates to: GPQRFLSKGKHQ*RSGLVTPLERH
Trigger: ATGTCTTTCCAAAGGAGTCACCAACCCAGATCTCCATTGGTGCTTTCCCTTCGACAAAAATCTCTGAGGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp AACTGTCCTTTAACTAACTTAAGAGTTGTTGGAGAGTCCGAGCTGTaGTCTGCTCTGGAAGCAGTTCTTTTGGGAAAGGGGCGGCACAAG +
Preference number: 6 (lower is better)
Translates to: NCPLTNLRVVGESEL*SALEAVLLGKGRHK
Trigger: CTTGTGCCGCCCCTTTCCCAAAAGAACTGCTTCCAGAGCAGACAACAGCTCGGACTCTCCAACAACTCTTAAGTTAGTTAAAGGACAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS TCA 72 bp GTGGTAACAGCACTGCTGCCAACACGGAGTCCACACTaGCATACCAATTTTGCCTGCTTTTCAGTATCAAAC +
Preference number: 6 (lower is better)
Translates to: VVTALLPTRSPH*HTNFACFSVSN
Trigger: GTTTGATACTGAAAAGCAGGCAAAATTGGTATGTCAGTGTGGACTCCGTGTTGGCAGCAGTGCTGTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463468.5
ENST00000480839.6
ENST00000496681.5
ENST00000527124.1
ENST00000645567.1
CDS GCA 72 bp CCGAGGCAGCTGTCAAGGACTTCACCTGCAGATAAATaGCTTCATCTGTTTTCAAATCACCGGGAAAGAGAT +
Preference number: 6 (lower is better)
Translates to: PRQLSRTSPADK*LHLFSNHRERD
Trigger: ATCTCTTTCCCGGTGATTTGAAAACAGATGAAGGCATTTATCTGCAGGTGAAGTCCTTGACAGCTGCCTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp CCTGCGGTAGCTGTGTTGGAATCATTGCACCGTAAGTaGACCAAAGAGCTATATCACATAGCATACGGTCTT +
Preference number: 6 (lower is better)
Translates to: PAVAVLESLHRK*TKELYHIAYGL
Trigger: AAGACCGTATGCTATGTGATATAGCTCTTTGGTCCACTTACGGTGCAATGATTCCAACACAGCTACCGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp CATGCATCTACCTACGACCAATCAAGCCATGTGGCTTaGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATT +
Preference number: 6 (lower is better)
Translates to: HASTYDQSSHVA*QAFHEFRVGLI
Trigger: AATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGCTTGATTGGTCGTAGGTAGATGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 72 bp CACAAAGGGAGGAAACCCCGACATTCAATAGCTCCTTaGTTTCACATGTTGACACATCTTGCAGCGTGTGGA +
Preference number: 6 (lower is better)
Translates to: HKGRKPRHSIAP*FHMLTHLAACG
Trigger: TCCACACGCTGCAAGATGTGTCAACATGTGAAACAAAGGAGCTATTGAATGTCGGGGTTTCCTCCCTTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp AAAGGGAGGAAACCCCGACATTCAATAGCTCCTTTGTTTCACATGTaGACACATCTTGCAGCGTGTGGATGGCTTTGCGTTCACCTTTTA +
Preference number: 6 (lower is better)
Translates to: KGRKPRHSIAPLFHM*THLAACGWLCVHLL
Trigger: TAAAAGGTGAACGCAAAGCCATCCACACGCTGCAAGATGTGTCAACATGTGAAACAAAGGAGCTATTGAATGTCGGGGTTTCCTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp GTTTGCACTGAAACTCGGGTGCCTCCTCAGGCCGTGTaGAGTTCTCATGGTATCTTTGAGTTCTTTTGTTAT +
Preference number: 6 (lower is better)
Translates to: VCTETRVPPQAV*SSHGIFEFFCY
Trigger: ATAACAAAAGAACTCAAAGATACCATGAGAACTTCACACGGCCTGAGGAGGCACCCGAGTTTCAGTGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GCCATGTGGCTTGGCAAGCCTTTCATGAATTTCGAGTaGGCCTTATTGCGTTGTATATTTGTAGAGCAATGC +
Preference number: 6 (lower is better)
Translates to: AMWLGKPFMNFE*ALLRCIFVEQC
Trigger: GCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 72 bp GCGCCTGTGAATTACCTGTTAGGAGGACAGCAAACCTaGCATCAATATGCTGAATTTGCAGGTTTAGCAAAC +
Preference number: 6 (lower is better)
Translates to: APVNYLLGGQQT*HQYAEFAGLAN
Trigger: GTTTGCTAAACCTGCAAATTCAGCATATTGATGCCAGGTTTGCTGTCCTCCTAACAGGTAATTCACAGGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487196.1
CDS CAA 72 bp TTAACTAACTTAAGAGTTGTTGGAGAGTCCGAGCTGTaGTCTGCTCTGGAAGCAGTTCTTTTGGGAAAGGGG +
Preference number: 6 (lower is better)
Translates to: LTNLRVVGESEL*SALEAVLLGKG
Trigger: CCCCTTTCCCAAAAGAACTGCTTCCAGAGCAGACAACAGCTCGGACTCTCCAACAACTCTTAAGTTAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CAA 72 bp AAACCCCGACATTCAATAGCTCCTTTGTTTCACATGTaGACACATCTTGCAGCGTGTGGATGGCTTTGCGTT +
Preference number: 6 (lower is better)
Translates to: KPRHSIAPLFHM*THLAACGWLCV
Trigger: AACGCAAAGCCATCCACACGCTGCAAGATGTGTCAACATGTGAAACAAAGGAGCTATTGAATGTCGGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp CACAGGTGGCTTAGCCCTTGGAACAGTTTTGACTGGAGATTTCTCTaGTTTCCTTGCCCTTTTAGCATTTGTTGGCACTGGAACATCTTT +
Preference number: 6 (lower is better)
Translates to: HRWLSPWNSFDWRFL*FPCPFSICWHWNIF
Trigger: AAAGATGTTCCAGTGCCAACAAATGCTAAAAGGGCAAGGAAACAAGAGAAATCTCCAGTCAAAACTGTTCCAAGGGCTAAGCCACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp CGAGGTGGATACAGGATGTCTAAGGCTTGCAGCAGGTaGTACTTGCTTAATCAACTCCTTCTTAAAGGTTGT +
Preference number: 6 (lower is better)
Translates to: RGGYRMSKACSR*YLLNQLLLKGC
Trigger: ACAACCTTTAAGAAGGAGTTGATTAAGCAAGTATCACCTGCTGCAAGCCTTAGACATCCTGTATCCACCTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp ACCTCTTCCGGTTCACCTATTTCCTCAGCTACATCCTaGAGTTCTAAATTTGAGAATGGGGCCTCCTCAAAT +
Preference number: 6 (lower is better)
Translates to: TSSGSPISSATS*SSKFENGASSN
Trigger: ATTTGAGGAGGCCCCATTCTCAAATTTAGAACTTCAGGATGTAGCTGAGGAAATAGGTGAACCGGAAGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp GGTGAACGAAATAAATGTAACCCATGCAGACCCATCTaGTTGCCTCCAAAATCTGGTTCTGATAGTAAGGCT +
Preference number: 6 (lower is better)
Translates to: GERNKCNPCRPI*LPPKSGSDSKA
Trigger: AGCCTTACTATCAGAACCAGATTTTGGAGGCAAGCAGATGGGTCTGCATGGGTTACATTTATTTCGTTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000532080.1
ENST00000645567.1
CDS GCA 72 bp AGCCCTGGAAATTTCGTTAGTCTCCAACAGAGAGTCTaGAGAACATTTTTCCAAACCAAGGGACTCCTCAAT +
Preference number: 6 (lower is better)
Translates to: SPGNFVSLQQRV*RTFFQTKGLLN
Trigger: ATTGAGGAGTCCCTTGGTTTGGAAAAATGTTCTGCAGACTCTCTGTTGGAGACTAACGAAATTTCCAGGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp ATTTTAAACATGGGCCTCATTCTAAGAGGGACATCATaGATCTACCTACGACCAATCAAGCCATGTGGCTTG +
Preference number: 6 (lower is better)
Translates to: ILNMGLILRGTS*IYLRPIKPCGL
Trigger: CAAGCCACATGGCTTGATTGGTCGTAGGTAGATGCATGATGTCCCTCTTAGAATGAGGCCCATGTTTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 72 bp TTGTTTCACATGTTGACACATCTTGCAGCGTGTGGATaGCTTTGCGTTCACCTTTTAGAGAAGATGTGGTGT +
Preference number: 6 (lower is better)
Translates to: LFHMLTHLAACG*LCVHLLEKMWC
Trigger: ACACCACATCTTCTCTAAAAGGTGAACGCAAAGCCATCCACACGCTGCAAGATGTGTCAACATGTGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GATACCATGGTCTTGAATGAAGACAGTCGGAGTATTTaGAAATGTATACACCTTTGGCTGGATCACCCAGAG +
Preference number: 6 (lower is better)
Translates to: DTMVLNEDSRSI*KCIHLWLDHPE
Trigger: CTCTGGGTGATCCAGCCAAAGGTGTATACATTTCCAAATACTCCGACTGTCTTCATTCAAGACCATGGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480839.6
ENST00000645567.1
CDS CAA 72 bp AGAGACCTGCATTTGTTGTACCTGGGTAAAGTTATCTaGCCCCACTGGATGGGTAGGACCAACAAAAACATT +
Preference number: 6 (lower is better)
Translates to: RDLHLLYLGKVI*PHWMGRTNKNI
Trigger: AATGTTTTTGTTGGTCCTACCCATCCAGTGGGGCAAGATAACTTTACCCAGGTACAACAAATGCAGGTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp GGTTGCTGTGTTCTACAACCTTTCGGGAAGATCGTATaGTTTTGTTCTGATTGCTGTAAAACAGAGCTACCC +
Preference number: 6 (lower is better)
Translates to: GCCVLQPFGKIV*FCSDCCKTELP
Trigger: GGGTAGCTCTGTTTTACAGCAATCAGAACAAAATCATACGATCTTCCCGAAAGGTTGTAGAACACAGCAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp CACCCCATATTATCATCCTTTCTTTCCAAGGAAGGGTaGCATTCATTGTTTATGGGGCTGCCATGTTGGATA +
Preference number: 6 (lower is better)
Translates to: HPILSSFLSKEG*HSLFMGLPCWI
Trigger: TATCCAACATGGCAGCCCCATAAACAATGAATGTCACCCTTCCTTGGAAAGAAAGGATGATAATATGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp ACAGATCTGTCTGGGTCGTTCAATAACGGTGTTGCCTaGAAGTTCGTAAAAGTAATACTTTGGCTGGATCAC +
Preference number: 6 (lower is better)
Translates to: TDLSGSFNNGVA*KFVKVILWLDH
Trigger: GTGATCCAGCCAAAGTATTACTTTTACGAACTTTCAGGCAACACCGTTATTGAACGACCCAGACAGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496681.5
CDS GCA 72 bp AACGAAATAAATGTAACCCATGCAGACCCATCTGCTTaGCTCCAAAATCTGGTTCTGATAGTAAGGCTGATG +
Preference number: 6 (lower is better)
Translates to: NEINVTHADPSA*LQNLVLIVRLM
Trigger: CATCAGCCTTACTATCAGAACCAGATTTTGGAGGCAAGCAGATGGGTCTGCATGGGTTACATTTATTTCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000532080.1
ENST00000645567.1
CDS CAA 90 bp CATGCTCACTTGAGACAATTTCCTCAGTTACTTTACCAGGAAGGGTaGGTCTACCTGTTCTTCCTGGATGATCAGTTAATATTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: HAHLRQFPQLLYQEG*VYLFFLDDQLILEA
Trigger: TGCCTCTAATATTAACTGATCATCCAGGAAGAACAGGTAGACCAACCCTTCCTGGTAAAGTAACTGAGGAAATTGTCTCAAGTGAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp GTGGCTTGGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATTGCGTaGTATATTTGTAGAGCAATGCACATCTATACTTCTCATACCTTG +
Preference number: 6 (lower is better)
Translates to: VAWQAFHEFRVGLIA*YICRAMHIYTSHTL
Trigger: CAAGGTATGAGAAGTATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 90 bp GCCATGTGGCTTGGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATaGCGTTGTATATTTGTAGAGCAATGCACATCTATACTTCTCATA +
Preference number: 6 (lower is better)
Translates to: AMWLGKPFMNFEWAL*RCIFVEQCTSILLI
Trigger: TATGAGAAGTATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAGCCACATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 90 bp CCTGCAAATACTACATTTTATATAAGGGCTTCAGCTTCAGCAGATTaGGGTGATTCTGGTATCCATGGGATGCCAAGCCATTTAGATACC +
Preference number: 6 (lower is better)
Translates to: PANTTFYIRASASAD*GDSGIHGMPSHLDT
Trigger: GGTATCTAAATGGCTTGGCATCCCATGGATACCAGAATCACCCAAATCTGCTGAAGCTGAAGCCCTTATATAAAATGTAGTATTTGCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487196.1
CDS TCA 72 bp GAAGGGCTTCTGTCCGCCTTGTACAATTCTTGGAAATaGCGCTTTACTAATGTGTTTGGATGGATTCTTTCT +
Preference number: 6 (lower is better)
Translates to: EGLLSALYNSWK*RFTNVFGWILS
Trigger: AGAAAGAATCCATCCAAACACATTAGTAAAGCGTCATTTCCAAGAATTGTACAAGGCGGACAGAAGCCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000532080.1
ENST00000645567.1
CDS TCA 72 bp ATTTCACACTCTACTGTTGTCTGGCTGTCTCTTCCTTaGGTTCTTGTATTTCTTCTTTCCAGTAGTTCTCCG +
Preference number: 6 (lower is better)
Translates to: ISHSTVVWLSLP*VLVFLLSSSSP
Trigger: CGGAGAACTACTGGAAAGAAGAAATACAAGAACTCAAGGAAGAGACAGCCAGACAACAGTAGAGTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000463468.5
ENST00000482419.1
CDS TCA 72 bp TTGACATTCCTAGAGCTGACCAATTTTGGCATTAACTaGGTAAAATGCGCCTGTGAATTACCTGTTAGGAGG +
Preference number: 6 (lower is better)
Translates to: LTFLELTNFGIN*VKCACELPVRR
Trigger: CCTCCTAACAGGTAATTCACAGGCGCATTTTACTCAGTTAATGCCAAAATTGGTCAGCTCTAGGAATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487196.1
CDS GCA 72 bp TTCAAAGGTGAGAGTAATTGGTTCCGGGTTAATCACTaGACACCCCATATTATCATCCTTTCTTTCCAAGGA +
Preference number: 6 (lower is better)
Translates to: FKGESNWFRVNH*TPHIIILSFQG
Trigger: TCCTTGGAAAGAAAGGATGATAATATGGGGTGTGCAGTGATTAACCCGGAACCAATTACTCTCACCTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp GATACAGGATGTCTAAGGCTTGCAGCAGGTGATACTTaGTTAATCAACTCCTTCTTAAAGGTTGTACGTTCA +
Preference number: 6 (lower is better)
Translates to: DTGCLRLAAGDT*LINSFLKVVRS
Trigger: TGAACGTACAACCTTTAAGAAGGAGTTGATTAAGCAAGTATCACCTGCTGCAAGCCTTAGACATCCTGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS GCA 72 bp GAGTGGGCCTTATTGCGTTGTATATTTGTAGAGCAATaGACATCTATACTTCTCATACCTTGTGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: EWALLRCIFVEQ*TSILLIPCGQI
Trigger: TATCTGCCCACAAGGTATGAGAAGTATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 72 bp TTTTTGTGGAGATTTCTTCACAGGTGGCTTAGCCCTTaGAACAGTTTTGACTGGAGATTTCTCTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: FLWRFLHRWLSP*NSFDWRFLLFP
Trigger: AGGAAACAAGAGAAATCTCCAGTCAAAACTGTTCCAAGGGCTAAGCCACCTGTGAAGAAATCTCCACAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp AGGGCATATGAATGTTCCACAGAAACAGAAGAGCTTTaGCTTGCATCTGAAGATTCTAGCATTTCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: RAYECSTETEEL*LASEDSSISSV
Trigger: TACTGAGGAAATGCTAGAATCTTCAGATGCAAGCCAAAGCTCTTCTGTTTCTGTGGAACATTCATATGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp GGAACATCTTTAGAAATAGGAGCTTCTTGGTTTTTCCTATCCAATTaGGTTTTCTGTACAAACTGTGCAGTCAGCACTTCCGCACCTCTT +
Preference number: 6 (lower is better)
Translates to: GTSLEIGASWFFLSN*VFCTNCAVSTSAPL
Trigger: AAGAGGTGCGGAAGTGCTGACTGCACAGTTTGTACAGAAAACCAAATTGGATAGGAAAAACCAAGAAGCTCCTATTTCTAAAGATGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp CAGGGCCCATGTAATGCTCTTACTACAGTTTTCTCCAGTGGGTTGTaGGTATATTTGCTGTCTAAACTGAATGCATATTCTGTTTCACAT +
Preference number: 6 (lower is better)
Translates to: QGPCNALTTVFSSGL*VYLLSKLNAYSVSH
Trigger: ATGTGAAACAGAATATGCATTCAGTTTAGACAGCAAATATACCAACAACCCACTGGAGAAAACTGTAGTAAGAGCATTACATGGGCCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp TTCCAGGGCCCATGTAATGCTCTTACTACAGTTTTCTCCAGTGGGTaGTTGGTATATTTGCTGTCTAAACTGAATGCATATTCTGTTTCA +
Preference number: 6 (lower is better)
Translates to: FQGPCNALTTVFSSG*LVYLLSKLNAYSVS
Trigger: TGAAACAGAATATGCATTCAGTTTAGACAGCAAATATACCAACAACCCACTGGAGAAAACTGTAGTAAGAGCATTACATGGGCCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TTCATTTTGTACACAGAGTTCCAAGCCTTGGGTAAGTaGTGTTTTAATGAAAGGAAGCAAGCAGTTAGGATC +
Preference number: 6 (lower is better)
Translates to: FILYTEFQALGK*CFNERKQAVRI
Trigger: GATCCTAACTGCTTGCTTCCTTTCATTAAAACACCACTTACCCAAGGCTTGGAACTCTGTGTACAAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp TACCTCTTAAAGTATAAGAATCCTCCAAATCCAGTCTaGGATTTCTACAATCACCAAGCAGGTCTAGATCAG +
Preference number: 6 (lower is better)
Translates to: YLLKYKNPPNPV*DFYNHQAGLDQ
Trigger: CTGATCTAGACCTGCTTGGTGATTGTAGAAATCCCAGACTGGATTTGGAGGATTCTTATACTTTAAGAGGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp GTTCTCATTGCCTTTTACTATATTTACTCTCTGTTTTaGTGGAGATTTCTTCACAGGTGGCTTAGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: VLIAFYYIYSLF*WRFLHRWLSPW
Trigger: CCAAGGGCTAAGCCACCTGTGAAGAAATCTCCACAAAAACAGAGAGTAAATATAGTAAAAGGCAATGAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp AGGAAGATCATTGTGAGCCGCTGTGGTATTTTCTGGTaGAACACTATTTATGCTAATCCCATCTTCTTGACA +
Preference number: 6 (lower is better)
Translates to: RKIIVSRCGIFW*NTIYANPIFLT
Trigger: TGTCAAGAAGATGGGATTAGCATAAATAGTGTTCAACCAGAAAATACCACAGCGGCTCACAATGATCTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000380270.3
ENST00000645567.1
CDS CAA 72 bp TCTAACGTGCTATTTATAGACACATATTTTGCTGGGTaGCTGTGTTCTACAACCTTTCGGGAAGATCGTATG +
Preference number: 6 (lower is better)
Translates to: SNVLFIDTYFAG*LCSTTFREDRM
Trigger: CATACGATCTTCCCGAAAGGTTGTAGAACACAGCAACCCAGCAAAATATGTGTCTATAAATAGCACGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp TTGAGACAATTTCCTCAGTTACTTTACCAGGAAGGGTaGGTCTACCTGTTCTTCCTGGATGATCAGTTAATA +
Preference number: 6 (lower is better)
Translates to: LRQFPQLLYQEG*VYLFFLDDQLI
Trigger: TATTAACTGATCATCCAGGAAGAACAGGTAGACCAACCCTTCCTGGTAAAGTAACTGAGGAAATTGTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp CTTGGCAAGCCTTTCATGAATTTCGAGTGGGCCTTATaGCGTTGTATATTTGTAGAGCAATGCACATCTATA +
Preference number: 6 (lower is better)
Translates to: LGKPFMNFEWAL*RCIFVEQCTSI
Trigger: TATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTGCCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS TCA 72 bp TCTATTCTCTATACTAACTGGCTGCAATGGATTTCCTaGTTTTACCAGTTTTTCAGGAGAAGGACTGAAGTC +
Preference number: 6 (lower is better)
Translates to: SILYTNWLQWIS*FYQFFRRRTEV
Trigger: GACTTCAGTCCTTCTCCTGAAAAACTGGTAAAATCAGGAAATCCATTGCAGCCAGTTAGTATAGAGAATAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp CGCCTATGCATTCTAAGGTTACATTATGTTCTGTACTaGCGATCCAAGTTAACAGCAAGTGAAAATGCACAT +
Preference number: 6 (lower is better)
Translates to: RLCILRLHYVLY*RSKLTASENAH
Trigger: ATGTGCATTTTCACTTGCTGTTAACTTGGATCGTCAGTACAGAACATAATGTAACCTTAGAATGCATAGGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 72 bp CTCTTGTTTCCTTGCCCTTTTAGCATTTGTTGGCACTaGAACATCTTTAGAAATAGGAGCTTCTTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: LLFPCPFSICWH*NIFRNRSFLVF
Trigger: AAAAACCAAGAAGCTCCTATTTCTAAAGATGTTCCAGTGCCAACAAATGCTAAAAGGGCAAGGAAACAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CCA 72 bp GCCTTTCTTCTTGACGTTCTTTTTCATGACACACTTTaGTTACCTCAAAACATCACAATTGTACCTACTCCT +
Preference number: 6 (lower is better)
Translates to: AFLLDVLFHDTL*LPQNITIVPTP
Trigger: AGGAGTAGGTACAATTGTGATGTTTTGAGGTAACCAAAGTGTGTCATGAAAAAGAACGTCAAGAAGAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 72 bp AGGCTGACCTCTCTACTCACAGACAGGCTTGTTTGTTaGATAAATACTGAATCAAACGCTTCCAAATTCATA +
Preference number: 6 (lower is better)
Translates to: RLTSLLTDRLVC*INTESNASKFI
Trigger: TATGAATTTGGAAGCGTTTGATTCAGTATTTATCAAACAAACAAGCCTGTCTGTGAGTAGAGAGGTCAGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp CAAGCCTTTCATGAATTTCGAGTGGGCCTTATTGCGTaGTATATTTGTAGAGCAATGCACATCTATACTTCT +
Preference number: 6 (lower is better)
Translates to: QAFHEFRVGLIA*YICRAMHIYTS
Trigger: AGAAGTATAGATGTGCATTGCTCTACAAATATACAACGCAATAAGGCCCACTCGAAATTCATGAAAGGCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CAA 90 bp AGATGTACCTCGCAAAGAATTTTCTTTAGAGAGCAAAACATCATTTaGTGGCAATTCAGAGGAACAGTGAAGATTTCTAGCCTCAGATAC +
Preference number: 6 (lower is better)
Translates to: RCTSQRIFFREQNII*WQFRGTVKISSLRY
Trigger: GTATCTGAGGCTAGAAATCTTCACTGTTCCTCTGAATTGCCACAAAATGATGTTTTGCTCTCTAAAGAAAATTCTTTGCGAGGTACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp TCACAAGATTCTAACGTGCTATTTATAGACACATATTTTGCTGGGTaGCTGTGTTCTACAACCTTTCGGGAAGATCGTATGATTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SQDSNVLFIDTYFAG*LCSTTFREDRMILF
Trigger: GAACAAAATCATACGATCTTCCCGAAAGGTTGTAGAACACAGCAACCCAGCAAAATATGTGTCTATAAATAGCACGTTAGAATCTTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp GATAACTCTAGGCTGACCTCTCTACTCACAGACAGGCTTGTTTGTTaGATAAATACTGAATCAAACGCTTCCAAATTCATATTTTCAGTG +
Preference number: 6 (lower is better)
Translates to: DNSRLTSLLTDRLVC*INTESNASKFIFSV
Trigger: CACTGAAAATATGAATTTGGAAGCGTTTGATTCAGTATTTATCAAACAAACAAGCCTGTCTGTGAGTAGAGAGGTCAGCCTAGAGTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS TCA 72 bp ACTTTTTCTTGCCTTCAGTTTAACCATTCAAACTCATaGGTTCCTCTGCCTTTCTTCTTGACGTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: TFSCLQFNHSNS*VPLPFFLTFFF
Trigger: GAAAAAGAACGTCAAGAAGAAAGGCAGAGGAACTCATGAGTTTGAATGGTTAAACTGAAGGCAAGAAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000459693.1
CDS CCA 72 bp TTACTGACACATTCACTATACCACTTGGTGCAGTTGTaGAAACCAATGTGTCAGACAAAGACTTATTTTCAA +
Preference number: 6 (lower is better)
Translates to: LLTHSLYHLVQL*KPMCQTKTYFQ
Trigger: TTGAAAATAAGTCTTTGTCTGACACATTGGTTTCCACAACTGCACCAAGTGGTATAGTGAATGTGTCAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp CCATGTAATGCTCTTACTACAGTTTTCTCCAGTGGGTaGTTGGTATATTTGCTGTCTAAACTGAATGCATAT +
Preference number: 6 (lower is better)
Translates to: PCNALTTVFSSG*LVYLLSKLNAY
Trigger: ATATGCATTCAGTTTAGACAGCAAATATACCAACAACCCACTGGAGAAAACTGTAGTAAGAGCATTACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp TTGGTATATTTGCTGTCTAAACTGAATGCATATTCTGTTTCACATTaGAAAGTGATCTTAACGGAGTCATCACAGCTAAGCACTATACGA +
Preference number: 6 (lower is better)
Translates to: LVYLLSKLNAYSVSH*KVILTESSQLSTIR
Trigger: TCGTATAGTGCTTAGCTGTGATGACTCCGTTAAGATCACTTTCAAATGTGAAACAGAATATGCATTCAGTTTAGACAGCAAATATACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 90 bp TCTCCAGAAACATCATTTAGCTCTTTGTCTTGGAAAATGAATTGGTaGCTATTCTTCATCACCTTGTTGAATTCAGCATACTCATTGAGA +
Preference number: 6 (lower is better)
Translates to: SPETSFSSLSWKMNW*LFFITLLNSAYSLR
Trigger: TCTCAATGAGTATGCTGAATTCAACAAGGTGATGAAGAATAGCAACCAATTCATTTTCCAAGACAAAGAGCTAAATGATGTTTCTGGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1
CDS CAA 72 bp TTACAACATAACCAGATTTCCCATGATACCATGGTCTaGAATGAAGACAGTCGGAGTATTTGGAAATGTATA +
Preference number: 6 (lower is better)
Translates to: LQHNQISHDTMV*NEDSRSIWKCI
Trigger: TATACATTTCCAAATACTCCGACTGTCTTCATTCAAGACCATGGTATCATGGGAAATCTGGTTATGTTGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000328090.9
ENST00000480839.6
ENST00000645567.1
CDS CAA 72 bp TGTAATGCTCTTACTACAGTTTTCTCCAGTGGGTTGTaGGTATATTTGCTGTCTAAACTGAATGCATATTCT +
Preference number: 6 (lower is better)
Translates to: CNALTTVFSSGL*VYLLSKLNAYS
Trigger: AGAATATGCATTCAGTTTAGACAGCAAATATACCAACAACCCACTGGAGAAAACTGTAGTAAGAGCATTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328090.9
ENST00000645567.1