RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAS1R3 (Homo sapiens)

Ensembl gene IDs: ENSG00000169962

Ensembl transcript IDs: ENST00000339381.6

Found 278 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCCAGCCTCCCCTAGGCCCTGCTGGGAGCTGACCCTGGGACTCTaGCCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAT +
Preference number: 1 (lower is better)
Translates to: GPASPRPCWELTLGL*PETLCGPGGVLASD
Trigger: ATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAGCTCCCAGCAGGGCCTAGGGGAGGCTGGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR GCA 90 bp TGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTaGCCCCACCTGGCCTCCCACTGCTGTGGTGCCTGGCAGGGTGCA +
Preference number: 1 (lower is better)
Translates to: CHPYLGGLCPGHMPV*PHLASHCCGAWQGA
Trigger: TGCACCCTGCCAGGCACCACAGCAGTGGGAGGCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR TCA 90 bp TTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTaGGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGC +
Preference number: 1 (lower is better)
Translates to: LGFQPSGRGLPASFS*AHGVGCGYPGSPPG
Trigger: GCCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR TCA 90 bp TGCAGGATGGGGGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTaGTTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTT +
Preference number: 1 (lower is better)
Translates to: CRMGALVGHGQVGRA*FGLPAIWPGPPCVL
Trigger: AAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCCCCCATCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp AGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTaGGCATATGCCTGTGTGCCCCCACCTGGCCTCCCACTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: RVGSWVPPLPRRALP*AYACVPPPGLPLLW
Trigger: CCACAGCAGTGGGAGGCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp TGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTTTCTGTCCATaGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCCGTGGTGC +
Preference number: 1 (lower is better)
Translates to: WRRAGVRSWWAVFCP*CWLRGPGGRCWPWC
Trigger: GCACCACGGCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp GCCCTGCTGGGAGCTGACCCTGGGACTCTGACCGGAGACCCTGTGTaGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTTTC +
Preference number: 1 (lower is better)
Translates to: ALLGADPGTLTGDPV*AWRRAGVRSWWAVF
Trigger: GAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAGCTCCCAGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp ACCTGGGCAGGCCTGGTCTGGGCACAGAGGGACAGGGACACAGCTTaGCTCTGGGGCCCAGATGGTCACAGGGGTGTCCACGTGCTCCAG +
Preference number: 1 (lower is better)
Translates to: TWAGLVWAQRDRDTA*LWGPDGHRGVHVLQ
Trigger: CTGGAGCACGTGGACACCCCTGTGACCATCTGGGCCCCAGAGCCAAGCTGTGTCCCTGTCCCTCTGTGCCCAGACCAGGCCTGCCCAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp TCCCACTGCTGTGGTGCCTGGCAGGGTGCAGGATGGGGGCCCTGGTaGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCA +
Preference number: 1 (lower is better)
Translates to: SHCCGAWQGAGWGPW*DMVRSAGPDLGFQP
Trigger: TGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCCCCCATCCTGCACCCTGCCAGGCACCACAGCAGTGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTaGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGT +
Preference number: 1 (lower is better)
Translates to: GDPVWAWRRAGVRSW*AVFCPWCWLRGPGG
Trigger: ACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp ACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTaGTGGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGT +
Preference number: 1 (lower is better)
Translates to: TGDPVWAWRRAGVRS*WAVFCPWCWLRGPG
Trigger: ACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp CGGGCCTCTTTCCAGAACAGTGGGTCTGGGTTACCTGGGCAGGCCTaGTCTGGGCACAGAGGGACAGGGACACAGCTTGGCTCTGGGGCC +
Preference number: 1 (lower is better)
Translates to: RASFQNSGSGLPGQA*SGHRGTGTQLGSGA
Trigger: GGCCCCAGAGCCAAGCTGTGTCCCTGTCCCTCTGTGCCCAGACCAGGCCTGCCCAGGTAACCCAGACCCACTGTTCTGGAAAGAGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp CCCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTaGCGTCAGATCCTGGTGGGCAGTTTTCTGTCCATGGTGCTGGCT +
Preference number: 1 (lower is better)
Translates to: PWDSDRRPCVGLAAC*RQILVGSFLSMVLA
Trigger: AGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp CTGGGAGCTGACCCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTaGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTTTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: LGADPGTLTGDPVWA*RRAGVRSWWAVFCP
Trigger: TGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAGCTCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR GCA 90 bp TTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCTaGCTTGGAATGAGGCACAGGGAGCTGGTCCAGCCTCCCCTAGGC +
Preference number: 1 (lower is better)
Translates to: LWDRCVACAPSLRLG*LGMRHRELVQPPLG
Trigger: GCCTAGGGGAGGCTGGACCAGCTCCCTGTGCCTCATTCCAAGGCAGCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTaGGAGCCCTCCGGGCCTCTTTCCAGAACAGTGGGTCTGGGTTAC +
Preference number: 1 (lower is better)
Translates to: PCVLFLSSRCGLRVP*EPSGPLSRTVGLGY
Trigger: GTAACCCAGACCCACTGTTCTGGAAAGAGGCCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 90 bp GCTCTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTaGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGG +
Preference number: 1 (lower is better)
Translates to: ALSLVLVTVMMLSTH*AKGRVGSWVPPLPR
Trigger: CCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGGCCCTGGTGGGACATaGTCAGGTCGGCAGGGCCTG +
Preference number: 2 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVGPGGT*SGRQGL
Trigger: CAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAGGATGGGGGCCCTGGTaGGACATGGTCAGGTCGGCA +
Preference number: 2 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRGWGPW*DMVRSA
Trigger: TGCCGACCTGACCATGTCCCACCAGGGCCCCCATCC...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATGGCAGGGTGCAGGATaGGGGCCCTGGTGGGACATG +
Preference number: 2 (lower is better)
Translates to: GRVGSWVPPLPRRALPWAWQGAG*GPWWDM
Trigger: CATGTCCCACCAGGGCCCCCATCCTGCACCCTGCCA...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCGCTCACGGTGTGGGTTaGGGGTACCCTGGGAGCCCT +
Preference number: 2 (lower is better)
Translates to: GKGQSRKLGATPTSAGSAAHGVG*GYPGSP
Trigger: AGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGC...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGGCCTCCCACTGCTGTaGTGCCTGGCAGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: SRKLGATPTSAGSALGICGLPLL*CLAGCR
Trigger: CCTGCACCCTGCCAGGCACCACAGCAGTGGGAGGCC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CAA 90 bp TGGCCGGGGCCTCCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTaGCGGGTACCCTGGGAGCCCTCCGGGCCTCTTTCCAGAACAGTG +
Preference number: 2 (lower is better)
Translates to: WPGPPCVLFLSSRCG*RVPWEPSGPLSRTV
Trigger: CACTGTTCTGGAAAGAGGCCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGGAGGCCCCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTACAGGGGTGTCCACGTaGTCCAGGCCTAGGGCTCAC +
Preference number: 2 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVTGVST*SRPRAH
Trigger: GTGAGCCCTAGGCCTGGAGCACGTGGACACCCCTGT...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp ACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGGGCATATGCCTGTGTaGCCCCACCTGGCCTCCCAC +
Preference number: 2 (lower is better)
Translates to: THWAKGRVGSWVPPLPRRGHMPV*PHLASH
Trigger: GTGGGAGGCCAGGTGGGGGCACACAGGCATATGCCC...CCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTCGGCAGGGCCTGATTTaGGCTTCCAGCCATCTGGCC +
Preference number: 2 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVRQGLI*ASSHLA
Trigger: GGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCG...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR TCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCAGGTCGGCAGGGCCTaGTTTGGGCTTCCAGCCATC +
Preference number: 2 (lower is better)
Translates to: SRKLGATPTSAGSALGICQVGRA*FGLPAI
Trigger: GATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCTGGCCGGGGCCTCCCTaGGTCCTTTTCCTGAGCTCA +
Preference number: 2 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGWPGPP*VLFLSS
Trigger: TGAGCTCAGGAAAAGGACGCAGGGAGGCCCCGGCCA...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCTACCTCGGCGGGCTCTaGCCTGGGCATATGCCTGTG +
Preference number: 2 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGYLGGL*PGHMPV
Trigger: CACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTA...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCGGCAGAGTAGGAAGCTaGGTGCCACCCCTACCTCGG +
Preference number: 2 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGGRVGS*VPPLPR
Trigger: CCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGACAGGGACACAGCTTaGCTCTGGGGCCCAGATGGT +
Preference number: 2 (lower is better)
Translates to: SRKLGATPTSAGSALGICDRDTA*LWGPDG
Trigger: ACCATCTGGGCCCCAGAGCCAAGCTGTGTCCCTGTC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCCCAGAACAGTGGGTCTaGGTTACCTGGGCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGPEQWV*VTWAGL
Trigger: CAGGCCTGCCCAGGTAACCCAGACCCACTGTTCTGG...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATCCTGAGCTCACGGTGTaGGTTGCGGGTACCCTGGGA +
Preference number: 2 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHPELTV*VAGTLG
Trigger: TCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGG...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCGGGCTTCCAGCCATCTaGCCGGGGCCTCCCTGCGTC +
Preference number: 2 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGGLPAI*PGPPCV
Trigger: GACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCC...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTTCTGCCCTGGGCATATaGCTGTGTGCCCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPSALGI*LCAPTW
Trigger: CCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGA...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTTGGGTCTGGGTTACCTaGGCAGGCCTGGTCTGGGCA +
Preference number: 2 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPWVWVT*AGLVWA
Trigger: TGCCCAGACCAGGCCTGCCCAGGTAACCCAGACCCA...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR TCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTCCTGCGTCCTTTTCCTaGGCTCACGGTGTGGGTTGC +
Preference number: 2 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPPASFS*AHGVGC
Trigger: GCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGG...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR GCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCGCCTCCCCTAGGCCCTaGTGGGAGCTGACCCTGGGA +
Preference number: 2 (lower is better)
Translates to: RLILWDRCVACAPSLRLGASPRP*WELTLG
Trigger: TCCCAGGGTCAGCTCCCAGCAGGGCCTAGGGGAGGC...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCGCTCTGGGGCCCAGATaGTCACAGGGGTGTCCACGT +
Preference number: 2 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGALGPR*SQGCPR
Trigger: ACGTGGACACCCCTGTGACCATCTGGGCCCCAGAGC...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTACGGCGGGCTCTGCCCTaGGCATATGCCTGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVRRALP*AYACVP
Trigger: GGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCG...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR TCA 72 bp GGGGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTaGTTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: GALVGHGQVGRA*FGLPAIWPGPP
Trigger: GGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR TCA 72 bp TCCCCTAGGCCCTGCTGGGAGCTGACCCTGGGACTCTaGCCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTG +
Preference number: 3 (lower is better)
Translates to: SPRPCWELTLGL*PETLCGPGGVL
Trigger: CAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAGCTCCCAGCAGGGCCTAGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp AGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTaGGCATATGCCTGTGTGCCCCCACCTGGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: SWVPPLPRRALP*AYACVPPPGLP
Trigger: TGGGAGGCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CAA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCAGCTCACGGTGTGGGTaGCGGGTACCCTGGGAGCCC +
Preference number: 3 (lower is better)
Translates to: GKGQSRKLGATPTSAGSASSRCG*RVPWEP
Trigger: GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCT...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp GGAGCTGACCCTGGGACTCTGACCGGAGACCCTGTGTaGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: GADPGTLTGDPV*AWRRAGVRSWW
Trigger: CCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR TCA 72 bp CAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTaGGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: QPSGRGLPASFS*AHGVGCGYPGS
Trigger: GCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp CCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTaGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGT +
Preference number: 3 (lower is better)
Translates to: PGGTWSGRQGLI*ASSHLAGASLR
Trigger: ACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp GACCCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTaGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTT +
Preference number: 3 (lower is better)
Translates to: DPGTLTGDPVWA*RRAGVRSWWAV
Trigger: AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR-3UTR CAA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCTCGGCAGGGCCTGATTaGGGCTTCCAGCCATCTGGC +
Preference number: 3 (lower is better)
Translates to: GKGQSRKLGATPTSAGSASAGPD*GFQPSG
Trigger: GCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGA...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp CTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTaGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: LSTHWAKGRVGS*VPPLPRRALPW
Trigger: CCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp GTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTaGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGT +
Preference number: 3 (lower is better)
Translates to: VWAWRRAGVRSW*AVFCPWCWLRG
Trigger: ACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp CCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTaGTGGGCAGTTTTCTGTCCATGGTGCTGGCTCCGG +
Preference number: 3 (lower is better)
Translates to: PVWAWRRAGVRS*WAVFCPWCWLR
Trigger: CCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR GCA 72 bp GACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTaGTGGCGTCAGATCCTGGTGGGCAGTTTTCTGTCC +
Preference number: 3 (lower is better)
Translates to: DSDRRPCVGLAA*WRQILVGSFLS
Trigger: GGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp GTCAGATCCTGGTGGGCAGTTTTCTGTCCATGGTGCTaGCTCCGGGGTCCTGGTGGTCGGTGCTGGCCGTGG +
Preference number: 3 (lower is better)
Translates to: VRSWWAVFCPWC*LRGPGGRCWPW
Trigger: CCACGGCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp GCTGGCGTCAGATCCTGGTGGGCAGTTTTCTGTCCATaGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGG +
Preference number: 3 (lower is better)
Translates to: AGVRSWWAVFCP*CWLRGPGGRCW
Trigger: CCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp TCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTaGCGTCAGATCCTGGTGGGCAGTTTTCTGTCCATG +
Preference number: 3 (lower is better)
Translates to: SDRRPCVGLAAC*RQILVGSFLSM
Trigger: CATGGACAGAAAACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp CTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTaGGAGCCCTCCGGGCCTCTTTCCAGAACAGTGGGT +
Preference number: 3 (lower is better)
Translates to: LFLSSRCGLRVP*EPSGPLSRTVG
Trigger: ACCCACTGTTCTGGAAAGAGGCCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CCA 72 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTaGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCC +
Preference number: 3 (lower is better)
Translates to: LVLVTVMMLSTH*AKGRVGSWVPP
Trigger: GGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR GCA 72 bp AAAGCGTTTAATTTTATGGGACAGATGTGTGGCCTGTaGCCCTTCTCTCCGGCTGGGCTGCCTTGGAATGAG +
Preference number: 3 (lower is better)
Translates to: KAFNFMGQMCGL*PFSPAGLPWNE
Trigger: CTCATTCCAAGGCAGCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGGTCGGTGCTGGCCGTaGTGCTGGACCCCGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGGRCWP*CWTPPP
Trigger: TGGGGGCGGGGTCCAGCACCACGGCCAGCACCGACC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCACGTGCGCGATGCAGATaGCGCGTGCCGCGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWARARCR*RVPRPG
Trigger: CCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACG...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGGCCTGGCGGCGTGCTaGCGTCAGATCCTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGGLAAC*RQILVG
Trigger: GCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCGCACCTGGCCCTCCTaGCACTGCCGCGAGCACCGG +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSARTWPS*HCREHR
Trigger: CCGGTGCTCGCGGCAGTGCCAGGAGGGCCAGGTGCG...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAGGGCTTCCAGCCATCTaGCCGGGGCCTCCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRGLPAI*PGPPCV
Trigger: GACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCC...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAACGAGTGGGGCCCGATaGCAGCCAGCACACGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRTSGAR*QPAHGA
Trigger: AGCCCCGTGTGCTGGCTGTCATCGGGCCCCACTCGT...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAGGAACAGGAGGACGCTaGGGCAGACCAGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWAGTGGR*GRPGPG
Trigger: GCCTGGGCCTGGTCTGCCTCAGCGTCCTCCTGTTCC...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCTGGTGCAGGACGTCCTaGACCTTCCCCAGCCGCGAG +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGWCRTS*TFPSRE
Trigger: CTCGCGGCTGGGGAAGGTGCAGGACGTCCTGCACCA...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAAGCCGGCTCGCCCCATaGCAGGAACCGAGACCTGCG +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWASRLAP*QEPRPA
Trigger: CGCAGGTCTCGGTTCCTGGCATGGGGCGAGCCGGCT...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGGGCATATGCCTGTGTaGCCCCACCTGGCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGGHMPV*PHLASH
Trigger: GTGGGAGGCCAGGTGGGGGCACACAGGCATATGCCC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGCTGCACACGGTCGCTaGGCACGGTGCGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGAAHGR*ARCGRR
Trigger: CCTTCTTCCGCACCGTGCCCAGCGACCGTGTGCAGC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAGCACCAGCGCCTCCGTaGGCAGCATGTGCCAGTCCG +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRAPAPP*AACASP
Trigger: CGGACTGGCACATGCTGCCCACGGAGGCGCTGGTGC...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGAGCCCTGGCTGCCGCATaGGCAGGTAACACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRALAAA*AGNTWA
Trigger: TGCCCAGGTGTTACCTGCTCATGCGGCAGCCAGGGC...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTTGGGCCGTGTCCGGCTaGGGAGGCCAGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPWAVSG*GGQPPR
Trigger: CCGAGGAGGCTGGCCTCCGCAGCCGGACACGGCCCA...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGGCACCAGGCCCTCGTaGGCGATGCAGATGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVGTRPS*AMQMPR
Trigger: ACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGAGGGCGTGGGCGGCGTaGACGGAGGCGAACAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGRAWAA*TEANSS
Trigger: GCTGCTGTTCGCCTCCGTGCACGCCGCCCACGCCCT...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAGGAAGCCAAGCACCGTaGCCATCTGGGCCATGCCGG +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWAGSQAP*PSGPCR
Trigger: CCGGCATGGCCCAGATGGGCACGGTGCTTGGCTTCC...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATGGCTTCACGGGGTCCTaGGCGGGGCAGCCTGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHGFTGS*AGQPEA
Trigger: CGCCTCAGGCTGCCCCGCGCAGGACCCCGTGAAGCC...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGACCAGGAACCGAGACCTaGGGCGGAAGCAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRPGTET*GGSSVC
Trigger: GCACACGCTGCTTCCGCCGCAGGTCTCGGTTCCTGG...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTTGCACACAGGGCTGCTaGGCCGTGTCCGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVCTQGC*AVSGCG
Trigger: TCCGCAGCCGGACACGGCCCAGCAGCCCTGTGTGCA...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCAGCACCGTGCCCATCTaGGCCATGCCGGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICSTVPI*AMPGSP
Trigger: GGGGCTGCCCGGCATGGCCCAGATGGGCACGGTGCT...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTAGAAGGCCGGGTCGGTaGCCAGGGCCAGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVRRPGR*PGPGAS
Trigger: AGACGCACCTGGCCCTGGCCACCGACCCGGCCTTCT...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGGGTTGCGGGTACCCTaGGAGCCCTCCGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVGLRVP*EPSGPL
Trigger: AAGAGGCCCGGAGGGCTCCCAGGGTACCCGCAACCC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
3UTR CAA 72 bp CCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTaGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: PWWDMVRSAGPD*GFQPSGRGLPA
Trigger: CGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATGCGCTAGGCCGAAGCTaGCCCAGGAGCGTGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHALGRS*PRSVCG
Trigger: GCCGCACACGCTCCTGGGTCAGCTTCGGCCTAGCGC...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp TGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGCCCCCGTCCCAGGGTaGAGGAGAGCCCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: CVLFLSSRCGLRVPWEPSAPVPG*RRAQRL
Trigger: CAGCCTCTGGGCTCTCCTGCACCCTGGGACGGGGGC...GGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp ACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGATGCAGATGCCGCGTaGCGCGGCCAGGGCCGAGAA +
Preference number: 4 (lower is better)
Translates to: THWAKGRVGSWVPPLPRRDADAA*RGQGRE
Trigger: TTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATC...CCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGCACCACCTGCACGCTaGTCTGGTTCACCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGAPPAR*SGSPGA
Trigger: TGCACCAGGTGAACCAGAGCAGCGTGCAGGTGGTGC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGTGGCCCTCCTGGCACTaGCGCGAGCACCGGGACACG +
Preference number: 4 (lower is better)
Translates to: YPLGKGQSRKLGATPTSAWPSWH*REHRDT
Trigger: CGTGTCCCGGTGCTCGCGGCAGTGCCAGGAGGGCCA...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATGAGCGTGTGCGGCAGTaGACCAGCGCCTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHERVRQ*TSASVG
Trigger: GCCCACGGAGGCGCTGGTGCACTGCCGCACACGCTC...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGGCCTGAGGACCACCTaGACATTGGCCAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVGLRTT*TLARRG
Trigger: GCCCCTCCTGGCCAATGTGCAGGTGGTCCTCAGGCC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTAGGAGGGCGCCCATCTaGACGGCGGGCCTGAGGACC +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPRRAPI*TAGLRT
Trigger: GGTCCTCAGGCCCGCCGTGCAGATGGGCGCCCTCCT...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATGGCCGGGGCCTCCCTaGGTCCTTTTCCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRWPGPP*VLFLSS
Trigger: TGAGCTCAGGAAAAGGACGCAGGGAGGCCCCGGCCA...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCTGCCCTGGGCATATaGCTGTGTGCCCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRSALGI*LCAPTW
Trigger: CCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGA...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTAGGCCAGCGTGGCATTaGTGGCGTGCGCTAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVRPAWH*WRALGR
Trigger: TCGGCCTAGCGCACGCCACCAATGCCACGCTGGCCT...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATGGGTCTGGGTTACCTaGGCAGGCCTGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWAWVWVT*AGLVWA
Trigger: TGCCCAGACCAGGCCTGCCCAGGTAACCCAGACCCA...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGGCCCTGGTGGGACATaGTCAGGTCGGCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICGPGGT*SGRQGL
Trigger: CAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGGATGGGGGCCCTGGTaGGACATGGTCAGGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVGWGPW*DMVRSA
Trigger: TGCCGACCTGACCATGTCCCACCAGGGCCCCCATCC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGACCGGCTGGGCTGCCTTaGAATGAGGCACAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRPAGLP*NEAQGA
Trigger: AGCTCCCTGTGCCTCATTCCAAGGCAGCCCAGCCGG...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCCATCCTAAGTTGCTGTaGCAGGCACAATGGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGHPKLL*QAQWGP
Trigger: GGGGCCCCATTGTGCCTGTCACAGCAACTTAGGATG...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCCAGCATGGCAAAGGTaGGGCCACGGGCACGGTTGT +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSAPAWQR*GHGHGC
Trigger: ACAACCGTGCCCGTGGCCTCACCTTTGCCATGCTGG...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCGGCGGAAGCAGCGTGTaGTTCGCTCCGGGGACCACT +
Preference number: 4 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGGGSSV*FAPGTT
Trigger: AGTGGTCCCCGGAGCGAAGCACACGCTGCTTCCGCC...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGGCTCACGGTGTGGGTTaGGGGTACCCTGGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGAHGVG*GYPGSP
Trigger: AGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGC...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTGTGGGCCTGGCGGCGTaGTGGCGTCAGATCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPVGLAA*WRQILV
Trigger: CACCAGGATCTGACGCCAGCACGCCGCCAGGCCCAC...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCGCGAGCTCTGACGAGTaGGGCCCGATGACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PCVLFLSSRCGLRVPWEPASSDE*GPMTAS
Trigger: GCTGGCTGTCATCGGGCCCCACTCGTCAGAGCTCGC...GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCAGCTGGGCACCCCTCTaGAGGAAGCCAAGCACCGTG +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSASWAPL*RKPSTV
Trigger: CACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCT...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp ACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGCCAGCGTGGCATTGGTaGCGTGCGCTAGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: THWAKGRVGSWVPPLPRRPAWHW*RALGRS
Trigger: GCTTCGGCCTAGCGCACGCCACCAATGCCACGCTGG...CCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAGTGTTCCCGTCATTCTaGCCTTGGGCATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWAVFPSF*PWASPG
Trigger: CCCTGGGGATGCCCAAGGCCAGAATGACGGGAACAC...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCTGGCAGGGTGCAGGATaGGGGCCCTGGTGGGACATG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICWQGAG*GPWWDM
Trigger: CATGTCCCACCAGGGCCCCCATCCTGCACCCTGCCA...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTCGGCGGGCTCTGCCCTaGGCATATGCCTGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPRRALP*AYACVP
Trigger: GGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCG...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCTCCCCTAGGCCCTGCTaGGAGCTGACCCTGGGACTC +
Preference number: 4 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGSPRPC*ELTLGL
Trigger: GAGTCCCAGGGTCAGCTCCCAGCAGGGCCTAGGGGA...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCCTGCGTCCTTTTCCTaGGCTCACGGTGTGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSAPASFS*AHGVGC
Trigger: GCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGG...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTCTGACCCTGGGACTCTaGCCGGAGACCCTGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPLTLGL*PETLCG
Trigger: CCCACACAGGGTCTCCGGTCAGAGTCCCAGGGTCAG...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCTTGAGGAGAACCTGGTaGACACAGGGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSALRRTW*TQGCWA
Trigger: GGCCCAGCAGCCCTGTGTGCACCAGGTTCTCCTCAA...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATCGGCGATGTCGCGGCTaGCTGCCTTGGCCAGGAACA +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHRRCRG*LPWPGT
Trigger: TGTTCCTGGCCAAGGCAGGCAGCCGCGACATCGCCG...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCAAGATGCTCAGGCCCTaGCGGCCGTACTCGTCGTCG +
Preference number: 4 (lower is better)
Translates to: PCVLFLSSRCGLRVPWEPKMLRP*RPYSSS
Trigger: CGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTT...GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGACCTGCGCTCACGTTCTaGAGCGTGATGCAGTCACAC +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRPALTF*SVMQSH
Trigger: GTGTGACTGCATCACGCTGCAGAACGTGAGCGCAGG...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGGCAGCCTGAGGCGTTaGACTGAAGAGTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PLPRRALPWAYACVPPPGGSLRR*TEECCA
Trigger: TGCACAACACTCTTCAGTGCAACGCCTCAGGCTGCC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCCTGGGCACTGAGCCCTaGCACACCCACAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGLGTEP*HTHSFR
Trigger: CCTGAAGCTGTGGGTGTGGCAGGGCTCAGTGCCCAG...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCTCCGTGGGCAGCATGTaGCAGTCCGTCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICSVGSM*QSVTTS
Trigger: GGAGGTGGTGACGGACTGGCACATGCTGCCCACGGA...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCTCTCTCCGGCTGGGCTaGCTTGGAATGAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GKGQSRKLGATPTSAGSASLRLG*LGMRHR
Trigger: CCTGTGCCTCATTCCAAGGCAGCCCAGCCGGAGAGA...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCAGATGTGTGGCCTGTaGCCCTTCTCTCCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICQMCGL*PFSPAG
Trigger: CCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCTGGGACTCTGACCGGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGACAGCAGGGCCCAGCATaGCAGAGGCAACTTCCAACA +
Preference number: 4 (lower is better)
Translates to: PGTLTGDPVWAWRRAGVRQQGPA*QRQLPT
Trigger: TGTTGGAAGTTGCCTCTGCCATGCTGGGCCCTGCTG...TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGTCAGAGTCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATGCGTCTTCACGTACTaGGGGAACTCGTGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRVGSWVPPLPRRALPWACVFTY*GNSCSW
Trigger: CCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCA...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGCCACGTCGTGGAGCCTaGGCACTGAGCCCTGCCACA +
Preference number: 4 (lower is better)
Translates to: YPLGKGQSRKLGATPTSAPRRGA*ALSPAT
Trigger: TGTGGCAGGGCTCAGTGCCCAGGCTCCACGACGTGG...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGGGGGGTGTTGAGCCCTaGCTGCCGCATGAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGGGVEP*LPHEQV
Trigger: TACCTGCTCATGCGGCAGCCAGGGCTCAACACCCCC...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCGGCAGGGCCTGATTTaGGCTTCCAGCCATCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICRQGLI*ASSHLA
Trigger: GGCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGAGAACGTCTGGTGGTaGTTTAGCCCTGCGCTCACG +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVENVWW*FSPALT
Trigger: CGTGAGCGCAGGGCTAAATCACCACCAGACGTTCTC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCCTGAGGCGTTGCACTaGAGAGTGTTGTGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICPEALH*RVLCRA
Trigger: GGCCCTGCACAACACTCTTCAGTGCAACGCCTCAGG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTTGCTCAGGCAGCCCGTaGGCGGGAGGTGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPCSGSP*AGGGTR
Trigger: CCTTGTCCCACCTCCCGCTCACGGGCTGCCTGAGCA...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGTGGGTTCACCGGGGCTaGGATCACAGGGTTGGGTCA +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGWVHRG*DHRVGS
Trigger: TGACCCAACCCTGTGATCTCAGCCCCGGTGAACCCA...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTCAGGTCGGCAGGGCCTaGTTTGGGCTTCCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPQVGRA*FGLPAI
Trigger: GATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTG...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTCGTACTCGTCGTCGCTaGCCAGGGCGGCCACCCAGT +
Preference number: 4 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPRTRRR*PGRPPS
Trigger: ACTGGGTGGCCGCCCTGGGCAGCGACGACGAGTACG...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTGGTTTTGCCGGTAGCTaGCCGCCTCGCAGTCCACAC +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPGFAGS*PPRSPH
Trigger: GTGTGGACTGCGAGGCGGGCAGCTACCGGCAAAACC...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGGCAGTTTTCTGTCCATGGTGCTGGCTCCGGGGTCCTGGTGGTCGGTGCTGGCCCACGGCCATTTTCATaGCCAGTGCCCAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GQFSVHGAGSGVLVVGAGPRPFS*PVPRAG
Trigger: GCCTGCTCTGGGCACTGGCCATGAAAATGGCCGTGG...GCCAGCACCGACCACCAGGACCCCGGAGCCAGCACCATGGACAGAAAACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTGGGAACTCGTGCAGCTaGGCACCCCTCTGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPGNSCS*APLWRK
Trigger: CTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCC...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGGCAGCCCGCCCACGTaGAAGGTCAGGTTGTACATG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICGSPPT*KVRLYM
Trigger: CATGTACAACCTGACCTTCCACGTGGGCGGGCTGCC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCGGGACACGGGCTTCTaGTTGTCAGACGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICRDTGF*LSDVCQ
Trigger: CTGGCACACGTCTGACAACCAGAAGCCCGTGTCCCG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGGCAGGCGATGTCGTCTaGGTTTTGCCGGTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGAGDVV*VLPVAA
Trigger: GGCAGCTACCGGCAAAACCCAGACGACATCGCCTGC...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTGACCATGGCGAGCTCTaGCGAGTGGGGCCCGATGAC +
Preference number: 4 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPDHGEL*RVGPDD
Trigger: GTCATCGGGCCCCACTCGTCAGAGCTCGCCATGGTC...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATGGGCTGTCCCGATGGTaGACGAACAGCCCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHGLSRW*TNSPKA
Trigger: TGCTTTGGGGCTGTTCGTTCACCATCGGGACAGCCC...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGCTCAGAGGCAGTTCTaGCTCCACGAAGATCTCGGC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICAQRQF*LHEDLG
Trigger: GCCGAGATCTTCGTGGAGTCAGAACTGCCTCTGAGC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGGTACTGCGTGTAGTTaGAGTAGGCGGCGATGTCGC +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICGTACS*SRRRCR
Trigger: GCGACATCGCCGCCTACTGCAACTACACGCAGTACC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCGGCCCTCGTGCGCGATaGAGATGCCGCGTGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGGPRAR*RCRVPR
Trigger: CCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCC...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGTGGTTGTCAGACGTGTaGCAGCGGATCTTCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGWLSDV*QRIFRR
Trigger: GCGCCTGAAGATCCGCTGGCACACGTCTGACAACCA...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGCCACCAGGTACCAGGTaGACAGTGCGACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: YPLGKGQSRKLGATPTSAPPGTR*TVRPPP
Trigger: TGGTGGAGGTCGCACTGTGCACCTGGTACCTGGTGG...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCCGTTTGAGGAGAACCTaGTGCACACAGGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCVLFLSSRCGLRVPWEPRLRRT*CTQGCW
Trigger: CCAGCAGCCCTGTGTGCACCAGGTTCTCCTCAAACG...GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTACCTGCACGCTGCTCTaGTTCACCTGGTGCAGGACG +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPTCTLL*FTWCRT
Trigger: CGTCCTGCACCAGGTGAACCAGAGCAGCGTGCAGGT...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCCACTGCGGGCAGCGCTaGCCCACCACGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGHCGQR*PTTSSS
Trigger: GGAGGAGGACGTGGTGGGCCAGCGCTGCCCGCAGTG...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCGGGGTGTTGTGCAGGGCCTaGGCCACGCTATACACAGCT +
Preference number: 4 (lower is better)
Translates to: VLFLSSRCGLRVPWEPSGVLCRA*ATLYTA
Trigger: AGCTGTGTATAGCGTGGCCCAGGCCCTGCACAACAC...CCCGGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGCGGGCAGGGCTGGGCTaGCCAGGGAACAGGAGGACG +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQRAGLG*PGNRRT
Trigger: CGTCCTCCTGTTCCCTGGCCAGCCCAGCCCTGCCCG...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp TGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCCCAGAACAGTGGGTCTaGGTTACCTGGGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: CVLFLSSRCGLRVPWEPSPEQWV*VTWAGL
Trigger: CAGGCCTGCCCAGGTAACCCAGACCCACTGTTCTGG...GGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGCGGCGGCCGTCAGCTaGACACGGTCGCTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVAAAVS*TRSLGT
Trigger: CGTGCCCAGCGACCGTGTGCAGCTGACGGCCGCCGC...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGCCAGGGCCGAGAAGATaGTCAGGCCCTGCCGGCCGT +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQPGPRR*SGPAGR
Trigger: ACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGG...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp TGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCAACAGCAGCACCACCTaGACGCTGCTCTGGTTCACC +
Preference number: 4 (lower is better)
Translates to: CVLFLSSRCGLRVPWEPSNSSTT*TLLWFT
Trigger: GGTGAACCAGAGCAGCGTGCAGGTGGTGCTGCTGTT...GGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTCCTGGCCACAAAAGGTaGAGGCGATGTCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GLIWASSHLAGASLRPFPPGHKR*RRCRLG
Trigger: ACCCAGACGACATCGCCTGCACCTTTTGTGGCCAGG...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATGTTTTCTGTCCATGGTaGTGGCTCCGGGGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHVFCPW*WLRGPG
Trigger: ACCAGGACCCCGGAGCCAGCACCATGGACAGAAAAC...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCGCCTCCCCTAGGCCCTaGTGGGAGCTGACCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGASPRP*WELTLG
Trigger: TCCCAGGGTCAGCTCCCAGCAGGGCCTAGGGGAGGC...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCGGCCTCCCACTGCTGTaGTGCCTGGCAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGGLPLL*CLAGCR
Trigger: CCTGCACCCTGCCAGGCACCACAGCAGTGGGAGGCC...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTGGCAGAGTAGGAAGCTaGGTGCCACCCCTACCTCGG +
Preference number: 4 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPGRVGS*VPPLPR
Trigger: CCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCGACCCTGTGTGGGCCTaGCGGCGTGCTGGCGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGDPVWA*RRAGVR
Trigger: TCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTC...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCACCGGAGACCCTGTGTaGGCCTGGCGGCGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGTGDPV*AWRRAG
Trigger: GCCAGCACGCCGCCAGGCCCACACAGGGTCTCCGGT...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTATGGGACAGATGTGTaGCCTGTGCCCCTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PCVLFLSSRCGLRVPWEPYGTDV*PVPLLS
Trigger: GGAGAGAAGGGGCACAGGCCACACATCTGTCCCATA...GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGGTGATGCAGTCACACTaGGGGCAGCGCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQVMQSH*GQRWPT
Trigger: GGTGGGCCAGCGCTGCCCGCAGTGTGACTGCATCAC...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTCACGCTATACACAGCTaGGTAGACAGAGAACGTCTG +
Preference number: 4 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVHAIHS*VDRERL
Trigger: CAGACGTTCTCTGTCTACGCAGCTGTGTATAGCGTG...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGGTGGGACAAGGGCTaGTGGGCCAGGCATCGGGCA +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGRWDKG*WARHRA
Trigger: TGCCCGATGCCTGGCCCAGCAGCCCTTGTCCCACCT...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAACCTGCCCACGTCGTaGAGCCTGGGCACTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGNLPTS*SLGTEP
Trigger: GGGCTCAGTGCCCAGGCTCCACGACGTGGGCAGGTT...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTCGAGGCCTGAACCAGTaGGCTGTCCCGATGGTGAAC +
Preference number: 4 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPRGLNQ*AVPMVN
Trigger: GTTCACCATCGGGACAGCCCACTGGTTCAGGCCTCG...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCTGGGACAAGGGCTGCTaGGCCAGGCATCGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGWDKGC*ARHRAG
Trigger: CCCTGCCCGATGCCTGGCCCAGCAGCCCTTGTCCCA...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCATGCTGTCTACCCACTaGGCAAAGGGCAGAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICMLSTH*AKGRVG
Trigger: TCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCAT...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCGTCAGATCCTGGTaGGCAGTTTTCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: YPLGKGQSRKLGATPTSAGVRSW*AVFCPW
Trigger: CCATGGACAGAAAACTGCCCACCAGGATCTGACGCC...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCCTGCGCGGGGCAGCCTaGGGCGTTGCACTGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGLRGAA*GVALKS
Trigger: ACTCTTCAGTGCAACGCCTCAGGCTGCCCCGCGCAG...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCTCTGCACGGCGGGCCTaGGGACCACCTGCACATTGG +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGSARRA*GPPAHW
Trigger: CCAATGTGCAGGTGGTCCTCAGGCCCGCCGTGCAGA...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCCCTTCATCCTAAGTTaGTGTGACAGGCACAATGGG +
Preference number: 4 (lower is better)
Translates to: SRKLGATPTSAGSALGICPFILS*CDRHNG
Trigger: CCCATTGTGCCTGTCACAGCAACTTAGGATGAAGGG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTATGGTGCACACAGGGCTaGTGGGCCGTGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVWCTQG*WAVSGC
Trigger: GCAGCCGGACACGGCCCAGCAGCCCTGTGTGCACCA...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGTACCTCGGCGGGCTCTaGCCTGGGCATATGCCTGTG +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQYLGGL*PGHMPV
Trigger: CACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTA...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGATCCGACTTGTTGTTaGTCTCCTCCACGGCCATTT +
Preference number: 4 (lower is better)
Translates to: YPLGKGQSRKLGATPTSADPTCC*SPPRPF
Trigger: AAATGGCCGTGGAGGAGATCAACAACAAGTCGGATC...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGTGTCCACGTTTCCGCTaGTGTCGAACCGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQCPRFR*CRTAAA
Trigger: TGCCGCTGCGGTTCGACAGCAGCGGAAACGTGGACA...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCGTGGCATTGGTGGCGTaGGCTAGGCCGAAGCTGACC +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGVALVA*ARPKLT
Trigger: GGTCAGCTTCGGCCTAGCGCACGCCACCAATGCCAC...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCACAGGGGTGTCCACGTaGTCCAGGCCTAGGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGTGVST*SRPRAH
Trigger: GTGAGCCCTAGGCCTGGAGCACGTGGACACCCCTGT...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp TGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCCTGAGATCACAGGGTTaGGTCACTCATGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CVLFLSSRCGLRVPWEPSLRSQG*VTHVSP
Trigger: AGGGGAAACATGAGTGACCCAACCCTGTGATCTCAG...GGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAAGATCTCGGCCGCCTaGAGGAAGAGTGTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGKISAA*RKSVLR
Trigger: CCTGAGCACACTCTTCCTGCAGGCGGCCGAGATCTT...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCGGGGACCACTCATCCTaGCCACAAAAGGTGCAGGCG +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGGDHSS*PQKVQA
Trigger: CGCCTGCACCTTTTGTGGCCAGGATGAGTGGTCCCC...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGAAAGGCCAGCGTaGCATTGGTGGCGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: LSLVLVTVMMLSTHWAKGRERPA*HWWRAL
Trigger: TAGCGCACGCCACCAATGCCACGCTGGCCTTTCTCT...GCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGCTCTGGGGCCCAGATaGTCACAGGGGTGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVALGPR*SQGCPR
Trigger: ACGTGGACACCCCTGTGACCATCTGGGCCCCAGAGC...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCCTCTGGTTCACCTGGTaGAGGACGTCCTGCACCTTC +
Preference number: 4 (lower is better)
Translates to: RLILWDRCVACAPSLRLGLWFTW*RTSCTF
Trigger: GAAGGTGCAGGACGTCCTGCACCAGGTGAACCAGAG...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR GCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGGCAGCCAGGATaGCCAGGACACAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVGRQPG*PGHRAG
Trigger: TCCTGCTCTGTGTCCTGGGCATCCTGGCTGCCTTCC...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGACAGGGACACAGCTTaGCTCTGGGGCCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVDRDTA*LWGPDG
Trigger: ACCATCTGGGCCCCAGAGCCAAGCTGTGTCCCTGTC...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR TCA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGCACTCATGTTTCCCCTaGTTTCCTGTGTTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQHSCFP*FPVFPS
Trigger: TGACGGGAACACAGGAAATCAGGGGAAACATGAGTG...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CCA 90 bp TGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCTCCAAGCGTTTAATTTTATaGGACAGATGTGTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CVLFLSSRCGLRVPWEPSKRLIL*DRCVAC
Trigger: ACAGGCCACACATCTGTCCCATAAAATTAAACGCTT...GGAGGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CGTGCGCGATGCAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGATaGTCAGGCCCTGCCGGCCGTACTCGTCGTCGCTGCCCAGGGCGG +
Preference number: 5 (lower is better)
Translates to: RARCRCRVPRPGPRR*SGPAGRTRRRCPGR
Trigger: CCGCCCTGGGCAGCGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp ACGGGGCAGCGGCACCAGGCCCTCGTGCGCGATGCAGATGCCGCGTaGCGCGGCCAGGGCCGAGAAGATGCTCAGGCCCTGCCGGCCGTA +
Preference number: 5 (lower is better)
Translates to: TGQRHQALVRDADAA*RGQGREDAQALPAV
Trigger: TACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CATCGGCACGGGGCAGCGGCACCAGGCCCTCGTGCGCGATGCAGATaGCGCGTGCCGCGGCCAGGGCCGAGAAGATGCTCAGGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: HRHGAAAPGPRARCR*RVPRPGPRRCSGPA
Trigger: GGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGTGCCGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CCCAGCCGCGAGTCATCGGCACGGGGCAGCGGCACCAGGCCCTCGTaGGCGATGCAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: PSRESSARGSGTRPS*AMQMPRAAARAEKM
Trigger: CATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGTGCCGATGACTCGCGGCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp TCGTCGTCGCTGCCCAGGGCGGCCACCCAGTTCCAGCCGAACTCCTaGAGCAGCTCCGCGGCGGCCGTCAGCTGCACACGGTCGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSSLPRAATQFQPNS*SSSAAAVSCTRSLG
Trigger: GCCCAGCGACCGTGTGCAGCTGACGGCCGCCGCGGAGCTGCTGCAGGAGTTCGGCTGGAACTGGGTGGCCGCCCTGGGCAGCGACGACGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGATGCTCAGGCCCTaGCGGCCGTACTCGTCGTCGCTGCCCAGGGCGGCCACCCAGTTC +
Preference number: 5 (lower is better)
Translates to: QMPRAAARAEKMLRP*RPYSSSLPRAATQF
Trigger: GAACTGGGTGGCCGCCCTGGGCAGCGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp GCGAGTCATCGGCACGGGGCAGCGGCACCAGGCCCTCGTGCGCGATaGAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGATGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ASHRHGAAAPGPRAR*RCRVPRPGPRRCSG
Trigger: GCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGTGCCGATGACTCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp TCACACTGCGGGCAGCGCTGGCCCACCACGTCCTCCTCCAGACCCTaGTCCCTCTCGCCCAGGGCAGAGCAGAAGGCCGGGTCGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SHCGQRWPTTSSSRP*SLSPRAEQKAGSVA
Trigger: GGCCACCGACCCGGCCTTCTGCTCTGCCCTGGGCGAGAGGGAGCAGGGTCTGGAGGAGGACGTGGTGGGCCAGCGCTGCCCGCAGTGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp ACTCCTGCAGCAGCTCCGCGGCGGCCGTCAGCTGCACACGGTCGCTaGGCACGGTGCGGAAGAAGGAGGGGAAGGTCTCCCGGGCGCTCA +
Preference number: 5 (lower is better)
Translates to: TPAAAPRRPSAAHGR*ARCGRRRGRSPGRS
Trigger: TGAGCGCCCGGGAGACCTTCCCCTCCTTCTTCCGCACCGTGCCCAGCGACCGTGTGCAGCTGACGGCCGCCGCGGAGCTGCTGCAGGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp GGGCCGAGAAGATGCTCAGGCCCTGCCGGCCGTACTCGTCGTCGCTaGCCAGGGCGGCCACCCAGTTCCAGCCGAACTCCTGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GPRRCSGPAGRTRRR*PGRPPSSSRTPAAA
Trigger: AGCTGCTGCAGGAGTTCGGCTGGAACTGGGTGGCCGCCCTGGGCAGCGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGGAGCGTGTGCGGCAGTGCACCAGCGCCTCCGTGGGCAGCATGTaGCAGTCCGTCACCACCTCCGGCGGGAAGGCCACCAGGTACCAG +
Preference number: 5 (lower is better)
Translates to: QERVRQCTSASVGSM*QSVTTSGGKATRYQ
Trigger: CTGGTACCTGGTGGCCTTCCCGCCGGAGGTGGTGACGGACTGGCACATGCTGCCCACGGAGGCGCTGGTGCACTGCCGCACACGCTCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp GTGGCGTGCGCTAGGCCGAAGCTGACCCAGGAGCGTGTGCGGCAGTaGACCAGCGCCTCCGTGGGCAGCATGTGCCAGTCCGTCACCACC +
Preference number: 5 (lower is better)
Translates to: VACARPKLTQERVRQ*TSASVGSMCQSVTT
Trigger: GGTGGTGACGGACTGGCACATGCTGCCCACGGAGGCGCTGGTGCACTGCCGCACACGCTCCTGGGTCAGCTTCGGCCTAGCGCACGCCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGTTCCAGCCGAACTCCTGCAGCAGCTCCGCGGCGGCCGTCAGCTaGACACGGTCGCTGGGCACGGTGCGGAAGAAGGAGGGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QFQPNSCSSSAAAVS*TRSLGTVRKKEGKV
Trigger: GACCTTCCCCTCCTTCTTCCGCACCGTGCCCAGCGACCGTGTGCAGCTGACGGCCGCCGCGGAGCTGCTGCAGGAGTTCGGCTGGAACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CGTGGGCGGCGTGCACGGAGGCGAACAGCAGCACCACCTGCACGCTaGTCTGGTTCACCTGGTGCAGGACGTCCTGCACCTTCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: RGRRARRRTAAPPAR*SGSPGAGRPAPSPA
Trigger: GGCTGGGGAAGGTGCAGGACGTCCTGCACCAGGTGAACCAGAGCAGCGTGCAGGTGGTGCTGCTGTTCGCCTCCGTGCACGCCGCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGGAGTGGAACCCCTTGACCCGGCGCACCTGGCCCTCCTGGCACTaGCGCGAGCACCGGGACACGGGCTTCTGGTTGTCAGACGTGTGC +
Preference number: 5 (lower is better)
Translates to: QEWNPLTRRTWPSWH*REHRDTGFWLSDVC
Trigger: GCACACGTCTGACAACCAGAAGCCCGTGTCCCGGTGCTCGCGGCAGTGCCAGGAGGGCCAGGTGCGCCGGGTCAAGGGGTTCCACTCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp GCAGCAGCAGCACAGCCGGCTCGCCCCATGCCAGGAACCGAGACCTaGGGCGGAAGCAGCGTGTGCTTCGCTCCGGGGACCACTCATCCT +
Preference number: 5 (lower is better)
Translates to: AAAAQPARPMPGTET*GGSSVCFAPGTTHP
Trigger: AGGATGAGTGGTCCCCGGAGCGAAGCACACGCTGCTTCCGCCGCAGGTCTCGGTTCCTGGCATGGGGCGAGCCGGCTGTGCTGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGGCTCAGCAGCAGGAGCAGCAGCAGCACAGCCGGCTCGCCCCATaGCAGGAACCGAGACCTGCGGCGGAAGCAGCGTGTGCTTCGCTC +
Preference number: 5 (lower is better)
Translates to: QAQQQEQQQHSRLAP*QEPRPAAEAACASL
Trigger: GAGCGAAGCACACGCTGCTTCCGCCGCAGGTCTCGGTTCCTGGCATGGGGCGAGCCGGCTGTGCTGCTGCTGCTCCTGCTGCTGAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp GCGGCGTGCACGGAGGCGAACAGCAGCACCACCTGCACGCTGCTCTaGTTCACCTGGTGCAGGACGTCCTGCACCTTCCCCAGCCGCGAG +
Preference number: 5 (lower is better)
Translates to: AACTEANSSTTCTLL*FTWCRTSCTFPSRE
Trigger: CTCGCGGCTGGGGAAGGTGCAGGACGTCCTGCACCAGGTGAACCAGAGCAGCGTGCAGGTGGTGCTGCTGTTCGCCTCCGTGCACGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCAGGAGTGGAACCCCTaGACCCGGCGCACCTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRKLGATPTSAGSALGICQEWNP*TRRTWP
Trigger: GGGCCAGGTGCGCCGGGTCAAGGGGTTCCACTCCTG...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp TGCAGCTGGGCACCCCTCTGGAGGAAGCCAAGCACCGTGCCCATCTaGGCCATGCCGGGCAGCCCCATGACCAGGTCAGAGGTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: CSWAPLWRKPSTVPI*AMPGSPMTRSEVSQ
Trigger: CTGGCTGACCTCTGACCTGGTCATGGGGCTGCCCGGCATGGCCCAGATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp GCCAGGGCCAGGTGCGTCTTCACGTACTGGGGGAACTCGTGCAGCTaGGCACCCCTCTGGAGGAAGCCAAGCACCGTGCCCATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: ARARCVFTYWGNSCS*APLWRKPSTVPIWA
Trigger: GGCCCAGATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCTGGCCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp CAGAAGGCCGGGTCGGTGGCCAGGGCCAGGTGCGTCTTCACGTACTaGGGGAACTCGTGCAGCTGGGCACCCCTCTGGAGGAAGCCAAGC +
Preference number: 5 (lower is better)
Translates to: QKAGSVARARCVFTY*GNSCSWAPLWRKPS
Trigger: GCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCTGGCCCTGGCCACCGACCCGGCCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGCCCGTCATTCTGGCCTaGGGCATCCCCAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: YPLGKGQSRKLGATPTSAPVILA*GIPRAP
Trigger: GGGGGCCCTGGGGATGCCCAAGGCCAGAATGACGGG...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 90 bp CAGGGCTTCACGGGGTCCTGCGCGGGGCAGCCTGAGGCGTTGCACTaGAGAGTGTTGTGCAGGGCCTGGGCCACGCTATACACAGCTGCG +
Preference number: 5 (lower is better)
Translates to: QGFTGSCAGQPEALH*RVLCRAWATLYTAA
Trigger: CGCAGCTGTGTATAGCGTGGCCCAGGCCCTGCACAACACTCTTCAGTGCAACGCCTCAGGCTGCCCCGCGCAGGACCCCGTGAAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp TCGGTGGCCAGGGCCAGGTGCGTCTTCACGTACTGGGGGAACTCGTaGAGCTGGGCACCCCTCTGGAGGAAGCCAAGCACCGTGCCCATC +
Preference number: 5 (lower is better)
Translates to: SVARARCVFTYWGNS*SWAPLWRKPSTVPI
Trigger: GATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCTGGCCCTGGCCACCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CACGGGCACGGTTGTAGCAGCCCGGCTGGCTCCGCACCAGGAAAGTaGCCAGGAAGCAGAGAAAGGCCAGCGTGGCATTGGTGGCGTGCG +
Preference number: 5 (lower is better)
Translates to: HGHGCSSPAGSAPGK*PGSRERPAWHWWRA
Trigger: CGCACGCCACCAATGCCACGCTGGCCTTTCTCTGCTTCCTGGGCACTTTCCTGGTGCGGAGCCAGCCGGGCTGCTACAACCGTGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp TGCGTCTTCACGTACTGGGGGAACTCGTGCAGCTGGGCACCCCTCTaGAGGAAGCCAAGCACCGTGCCCATCTGGGCCATGCCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CVFTYWGNSCSWAPL*RKPSTVPIWAMPGS
Trigger: GCTGCCCGGCATGGCCCAGATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCTCGCGGCTGCCTGCCTaGGCCAGGAACATGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SRKLGATPTSAGSALGICSRLPA*ARNMRL
Trigger: CAGCCTCATGTTCCTGGCCAAGGCAGGCAGCCGCGA...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGAGACCCTGTGTGGGCCTGGCGGCGTGCTGGCGTCAGATCCTGGTGGGCAGTTGACACGGGCTTCTGGTaGTCAGACGTGTGCCAGCGG +
Preference number: 5 (lower is better)
Translates to: GDPVWAWRRAGVRSWWAVDTGFW*SDVCQR
Trigger: CCGCTGGCACACGTCTGACAACCAGAAGCCCGTGTC...AACTGCCCACCAGGATCTGACGCCAGCACGCCGCCAGGCCCACACAGGGTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CAGAGCAGGAGGGCGCCCATCTGCACGGCGGGCCTGAGGACCACCTaGACATTGGCCAGGAGGGGCACAAAGGAGACCCAGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: QSRRAPICTAGLRTT*TLARRGTKETQVMK
Trigger: CTTCATCACCTGGGTCTCCTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGTCCTCAGGCCCGCCGTGCAGATGGGCGCCCTCCTGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp CCCTGCGTCCTTTTCCTGAGCTCACGGTGTGGGTTGCGGGTACCCTGGGAGCCCGATGTCGTCTGGGTTTaGCCGGTAGCTGCCCGCCTC +
Preference number: 5 (lower is better)
Translates to: PCVLFLSSRCGLRVPWEPDVVWV*PVAARL
Trigger: GAGGCGGGCAGCTACCGGCAAAACCCAGACGACATC...GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCTCAGGAAAAGGACGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCAGGACCACCTGCACATaGGCCAGGAGGGGCACAAAG +
Preference number: 5 (lower is better)
Translates to: GKGQSRKLGATPTSAGSARTTCT*ARRGTK
Trigger: CTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGTCCT...GGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp CCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCCTGTGTGCCCCCACCTGGCGCTGAGATCACAGGGTaGGGTCACTCATGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: PLPRRALPWAYACVPPPGAEITG*GHSCFP
Trigger: GGGGAAACATGAGTGACCCAACCCTGTGATCTCAGC...GCCAGGTGGGGGCACACAGGCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 90 bp CCGCAGGCAGCCACTCAGCCGGTCTGCCCAGCTCAGAGGCAGTTCTaGCTCCACGAAGATCTCGGCCGCCTGCAGGAAGAGTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: PQAATQPVCPAQRQF*LHEDLGRLQEECAQ
Trigger: CTGAGCACACTCTTCCTGCAGGCGGCCGAGATCTTCGTGGAGTCAGAACTGCCTCTGAGCTGGGCAGACCGGCTGAGTGGCTGCCTGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp GCCACACCCACAGCTTCAGGTCGTACTCCATGTCCACGTTTCCGCTaGTGTCGAACCGCAGCGGCAGCCCGCCCACGTGGAAGGTCAGGT +
Preference number: 5 (lower is better)
Translates to: ATPTASGRTPCPRFR*CRTAAAARPRGRSG
Trigger: ACCTGACCTTCCACGTGGGCGGGCTGCCGCTGCGGTTCGACAGCAGCGGAAACGTGGACATGGAGTACGACCTGAAGCTGTGGGTGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAAGCAGATCCGACTTGTaGTTGATCTCCTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: GRVGSWVPPLPRRALPWASRSDL*LISSTA
Trigger: GGCCGTGGAGGAGATCAACAACAAGTCGGATCTGCT...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGCCTGATTTGGGCTTCCAGCCATCTGGCCGGGGCCTCCCTGCGTCCTTTTCCTAAGAACTCGGGGGTGTaGAGCCCTGGCTGCCGCATG +
Preference number: 5 (lower is better)
Translates to: GLIWASSHLAGASLRPFPKNSGV*SPGCRM
Trigger: CATGCGGCAGCCAGGGCTCAACACCCCCGAGTTCTT...AGGAAAAGGACGCAGGGAGGCCCCGGCCAGATGGCTGGAAGCCCAAATCAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTAGCTCACGGTGTGGGTaGCGGGTACCCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: DAVYPLGKGQSRKLGATPSSRCG*RVPWEP
Trigger: GGGCTCCCAGGGTACCCGCAACCCACACCGTGAGCT...AGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTAGACAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp TACCCACTGGGCAAAGGGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGTCGGCAGGGCCTGATTaGGGCTTCCAGCCATCTGGC +
Preference number: 5 (lower is better)
Translates to: YPLGKGQSRKLGATPTSASAGPD*GFQPSG
Trigger: GCCAGATGGCTGGAAGCCCAAATCAGGCCCTGCCGA...CGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCCCTTTGCCCAGTGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 90 bp GGTCGTAGCCCAGGCGCAGCCCGGGCAGCAGATCCGACTTGTTGTTaGTCTCCTCCACGGCCATTTTCATGGCCAGTGCCCAGAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GRSPGAARAADPTCC*SPPRPFSWPVPRAG
Trigger: GCCTGCTCTGGGCACTGGCCATGAAAATGGCCGTGGAGGAGATCAACAACAAGTCGGATCTGCTGCCCGGGCTGCGCCTGGGCTACGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 90 bp CTGGTACTGCGTGTAGTTGCAGTAGGCGGCGATGTCGCGGCTGCCTaGCTTGGCCAGGAACATGAGGCTGGGCTTCATGGCCACCACAGG +
Preference number: 5 (lower is better)
Translates to: LVLRVVAVGGDVAAA*LGQEHEAGLHGHHR
Trigger: CCTGTGGTGGCCATGAAGCCCAGCCTCATGTTCCTGGCCAAGGCAGGCAGCCGCGACATCGCCGCCTACTGCAACTACACGCAGTACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp TCCACGTTTCCGCTGCTGTCGAACCGCAGCGGCAGCCCGCCCACGTaGAAGGTCAGGTTGTACATGTTCTCCAGGAGCTGCCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: STFPLLSNRSGSPPT*KVRLYMFSRSCQGF
Trigger: GAAGCCCTGGCAGCTCCTGGAGAACATGTACAACCTGACCTTCCACGTGGGCGGGCTGCCGCTGCGGTTCGACAGCAGCGGAAACGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGCAGAGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCAACGTGGAAGGTCAGGTaGTACATGTTCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GRVGSWVPPLPRRALPWATWKVR*YMFSRS
Trigger: GCTCCTGGAGAACATGTACAACCTGACCTTCCACGT...TGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 90 bp AGAACGTCTGGTGGTGATTTAGCCCTGCGCTCACGTTCTGCAGCGTaGTGCAGTCACACTGCGGGCAGCGCTGGCCCACCACGTCCTCCT +
Preference number: 5 (lower is better)
Translates to: RTSGGDLALRSRSAA*CSHTAGSAGPPRPP
Trigger: AGGAGGACGTGGTGGGCCAGCGCTGCCCGCAGTGTGACTGCATCACGCTGCAGAACGTGAGCGCAGGGCTAAATCACCACCAGACGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp AGTAGGAAGCTGGGTGCCACCCCTACCTCGGCGGGCTCTGCCCTGGGCATATGCGGCAGCAGATCCGACTaGTTGTTGATCTCCTCCACG +
Preference number: 5 (lower is better)
Translates to: SRKLGATPTSAGSALGICGSRSD*LLISST
Trigger: CGTGGAGGAGATCAACAACAAGTCGGATCTGCTGCC...GCATATGCCCAGGGCAGAGCCCGCCGAGGTAGGGGTGGCACCCAGCTTCCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GGCCCTGGTGGGACATGGTCAGGTCGGCAGGGCCTGATTTGGGCTTCCAGCCATAAGAAGCTGAAGAACTaGCCGGTGACCATGGCGAGC +
Preference number: 5 (lower is better)
Translates to: GPGGTWSGRQGLIWASSHKKLKN*PVTMAS
Trigger: GCTCGCCATGGTCACCGGCAAGTTCTTCAGCTTCTT...ATGGCTGGAAGCCCAAATCAGGCCCTGCCGACCTGACCATGTCCCACCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp CGTTTAATTTTATGGGACAGATGTGTGGCCTGTGCCCCTTCTCTCCGGCTGGGCGTCCTGAGGCTGCCGTaGAACCTGCCCACGTCGTGG +
Preference number: 5 (lower is better)
Translates to: RLILWDRCVACAPSLRLGVLRLP*NLPTSW
Trigger: CCACGACGTGGGCAGGTTCAACGGCAGCCTCAGGAC...GCCCAGCCGGAGAGAAGGGGCACAGGCCACACATCTGTCCCATAAAATTAAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp CTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGTAAAGGCCAGCGTGGCATaGGTGGCGTGCGCTAGGCCG +
Preference number: 5 (lower is better)
Translates to: LVLVTVMMLSTHWAKGRVKASVA*VACARP
Trigger: CGGCCTAGCGCACGCCACCAATGCCACGCTGGCCTT...TACTCTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 90 bp GGATCGCAGCTAAGTCTGGGTTCACCGGGGCTGAGATCACAGGGTTaGGTCACTCATGTTTCCCCTGATTTCCTGTGTTCCCGTCATTCT +
Preference number: 5 (lower is better)
Translates to: GSQLSLGSPGLRSQG*VTHVSPDFLCSRHS
Trigger: AGAATGACGGGAACACAGGAAATCAGGGGAAACATGAGTGACCCAACCCTGTGATCTCAGCCCCGGTGAACCCAGACTTAGCTGCGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS-3UTR CAA 90 bp GTCCCTGGTACTGGTGACAGTCATGATGCTGTCTACCCACTGGGCAAAGGGCAGAGATCCGACTTGTTGTaGATCTCCTCCACGGCCATT +
Preference number: 5 (lower is better)
Translates to: VPGTGDSHDAVYPLGKGQRSDLL*ISSTAI
Trigger: AATGGCCGTGGAGGAGATCAACAACAAGTCGGATCT...CTGCCCTTTGCCCAGTGGGTAGACAGCATCATGACTGTCACCAGTACCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp CGTGCCGCGGCCAGGGCCGAGAAGATGCTCAGGCCCTaGCGGCCGTACTCGTCGTCGCTGCCCAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RAAARAEKMLRP*RPYSSSLPRAA
Trigger: GGCCGCCCTGGGCAGCGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp CGGCACGGGGCAGCGGCACCAGGCCCTCGTGCGCGATaGAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGA +
Preference number: 6 (lower is better)
Translates to: RHGAAAPGPRAR*RCRVPRPGPRR
Trigger: TCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGTGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GAGTCATCGGCACGGGGCAGCGGCACCAGGCCCTCGTaGGCGATGCAGATGCCGCGTGCCGCGGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: ESSARGSGTRPS*AMQMPRAAARA
Trigger: GGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCCGTGCCGATGACTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp CGGCACCAGGCCCTCGTGCGCGATGCAGATGCCGCGTaGCGCGGCCAGGGCCGAGAAGATGCTCAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: RHQALVRDADAA*RGQGREDAQAL
Trigger: CAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GGGGCAGCGGCACCAGGCCCTCGTGCGCGATGCAGATaGCGCGTGCCGCGGCCAGGGCCGAGAAGATGCTCA +
Preference number: 6 (lower is better)
Translates to: GAAAPGPRARCR*RVPRPGPRRCS
Trigger: TGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCATCGCGCACGAGGGCCTGGTGCCGCTGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp TGCAGATGCCGCGTGCCGCGGCCAGGGCCGAGAAGATaGTCAGGCCCTGCCGGCCGTACTCGTCGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: CRCRVPRPGPRR*SGPAGRTRRRC
Trigger: GCAGCGACGACGAGTACGGCCGGCAGGGCCTGAGCATCTTCTCGGCCCTGGCCGCGGCACGCGGCATCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GCACAGCCGGCTCGCCCCATGCCAGGAACCGAGACCTaGGGCGGAAGCAGCGTGTGCTTCGCTCCGGGGACC +
Preference number: 6 (lower is better)
Translates to: AQPARPMPGTET*GGSSVCFAPGT
Trigger: GGTCCCCGGAGCGAAGCACACGCTGCTTCCGCCGCAGGTCTCGGTTCCTGGCATGGGGCGAGCCGGCTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GTGCGGCAGTGCACCAGCGCCTCCGTGGGCAGCATGTaGCAGTCCGTCACCACCTCCGGCGGGAAGGCCACC +
Preference number: 6 (lower is better)
Translates to: VRQCTSASVGSM*QSVTTSGGKAT
Trigger: GGTGGCCTTCCCGCCGGAGGTGGTGACGGACTGGCACATGCTGCCCACGGAGGCGCTGGTGCACTGCCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp GCAGCTCCGCGGCGGCCGTCAGCTGCACACGGTCGCTaGGCACGGTGCGGAAGAAGGAGGGGAAGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: AAPRRPSAAHGR*ARCGRRRGRSP
Trigger: GGGAGACCTTCCCCTCCTTCTTCCGCACCGTGCCCAGCGACCGTGTGCAGCTGACGGCCGCCGCGGAGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp GAGTGGAACCCCTTGACCCGGCGCACCTGGCCCTCCTaGCACTGCCGCGAGCACCGGGACACGGGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: EWNPLTRRTWPS*HCREHRDTGFW
Trigger: CCAGAAGCCCGTGTCCCGGTGCTCGCGGCAGTGCCAGGAGGGCCAGGTGCGCCGGGTCAAGGGGTTCCACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp CCCAGGAGCGTGTGCGGCAGTGCACCAGCGCCTCCGTaGGCAGCATGTGCCAGTCCGTCACCACCTCCGGCG +
Preference number: 6 (lower is better)
Translates to: PRSVCGSAPAPP*AACASPSPPPA
Trigger: CGCCGGAGGTGGTGACGGACTGGCACATGCTGCCCACGGAGGCGCTGGTGCACTGCCGCACACGCTCCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp CCGAACTCCTGCAGCAGCTCCGCGGCGGCCGTCAGCTaGACACGGTCGCTGGGCACGGTGCGGAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: PNSCSSSAAAVS*TRSLGTVRKKE
Trigger: CTCCTTCTTCCGCACCGTGCCCAGCGACCGTGTGCAGCTGACGGCCGCCGCGGAGCTGCTGCAGGAGTTCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 72 bp CCAGCGTGGCATTGGTGGCGTGCGCTAGGCCGAAGCTaGCCCAGGAGCGTGTGCGGCAGTGCACCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: PAWHWWRALGRS*PRSVCGSAPAP
Trigger: AGGCGCTGGTGCACTGCCGCACACGCTCCTGGGTCAGCTTCGGCCTAGCGCACGCCACCAATGCCACGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GCTAGGCCGAAGCTGACCCAGGAGCGTGTGCGGCAGTaGACCAGCGCCTCCGTGGGCAGCATGTGCCAGTCC +
Preference number: 6 (lower is better)
Translates to: ARPKLTQERVRQ*TSASVGSMCQS
Trigger: GGACTGGCACATGCTGCCCACGGAGGCGCTGGTGCACTGCCGCACACGCTCCTGGGTCAGCTTCGGCCTAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp GGGTCGGTGGCCAGGGCCAGGTGCGTCTTCACGTACTaGGGGAACTCGTGCAGCTGGGCACCCCTCTGGAGG +
Preference number: 6 (lower is better)
Translates to: GSVARARCVFTY*GNSCSWAPLWR
Trigger: CCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCTGGCCCTGGCCACCGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp AGGGCGCCCATCTGCACGGCGGGCCTGAGGACCACCTaGACATTGGCCAGGAGGGGCACAAAGGAGACCCAG +
Preference number: 6 (lower is better)
Translates to: RAPICTAGLRTT*TLARRGTKETQ
Trigger: CTGGGTCTCCTTTGTGCCCCTCCTGGCCAATGTGCAGGTGGTCCTCAGGCCCGCCGTGCAGATGGGCGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp AGGATGCCCAGGACACAGAGCAGGAGGGCGCCCATCTaGACGGCGGGCCTGAGGACCACCTGCACATTGGCC +
Preference number: 6 (lower is better)
Translates to: RMPRTQSRRAPI*TAGLRTTCTLA
Trigger: GGCCAATGTGCAGGTGGTCCTCAGGCCCGCCGTGCAGATGGGCGCCCTCCTGCTCTGTGTCCTGGGCATCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp GCACCCCTCTGGAGGAAGCCAAGCACCGTGCCCATCTaGGCCATGCCGGGCAGCCCCATGACCAGGTCAGAG +
Preference number: 6 (lower is better)
Translates to: APLWRKPSTVPI*AMPGSPMTRSE
Trigger: CTCTGACCTGGTCATGGGGCTGCCCGGCATGGCCCAGATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CAA 90 bp GACGTGTGCCAGCGGATCTTCAGGCGCTCTGTCCTGAGGCTGCCGTaGAACCTGCCCACGTCGTGGAGCCTGGGCACTGAGCCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: DVCQRIFRRSVLRLP*NLPTSWSLGTEPCH
Trigger: GTGGCAGGGCTCAGTGCCCAGGCTCCACGACGTGGGCAGGTTCAACGGCAGCCTCAGGACAGAGCGCCTGAAGATCCGCTGGCACACGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 72 bp ACGGGGTCCTGCGCGGGGCAGCCTGAGGCGTTGCACTaGAGAGTGTTGTGCAGGGCCTGGGCCACGCTATAC +
Preference number: 6 (lower is better)
Translates to: TGSCAGQPEALH*RVLCRAWATLY
Trigger: GTATAGCGTGGCCCAGGCCCTGCACAACACTCTTCAGTGCAACGCCTCAGGCTGCCCCGCGCAGGACCCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp CCTGCGCTCACGTTCTGCAGCGTGATGCAGTCACACTaGGGGCAGCGCTGGCCCACCACGTCCTCCTCCAGA +
Preference number: 6 (lower is better)
Translates to: PALTFCSVMQSH*GQRWPTTSSSR
Trigger: TCTGGAGGAGGACGTGGTGGGCCAGCGCTGCCCGCAGTGTGACTGCATCACGCTGCAGAACGTGAGCGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp GCCCCCTCCCAGGAAGAACTCGGGGGTGTTGAGCCCTaGCTGCCGCATGAGCAGGTAACACCTGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: APSQEELGGVEP*LPHEQVTPGQV
Trigger: CACCTGCCCAGGTGTTACCTGCTCATGCGGCAGCCAGGGCTCAACACCCCCGAGTTCTTCCTGGGAGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp AGGGCCAGGTGCGTCTTCACGTACTGGGGGAACTCGTaGAGCTGGGCACCCCTCTGGAGGAAGCCAAGCACC +
Preference number: 6 (lower is better)
Translates to: RARCVFTYWGNS*SWAPLWRKPST
Trigger: GGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCTGGCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp AGGAAGCAGAGAAAGGCCAGCGTGGCATTGGTGGCGTaGGCTAGGCCGAAGCTGACCCAGGAGCGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: RKQRKASVALVA*ARPKLTQERVR
Trigger: CCGCACACGCTCCTGGGTCAGCTTCGGCCTAGCGCACGCCACCAATGCCACGCTGGCCTTTCTCTGCTTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp ACGGAGGCGAACAGCAGCACCACCTGCACGCTGCTCTaGTTCACCTGGTGCAGGACGTCCTGCACCTTCCCC +
Preference number: 6 (lower is better)
Translates to: TEANSSTTCTLL*FTWCRTSCTFP
Trigger: GGGGAAGGTGCAGGACGTCCTGCACCAGGTGAACCAGAGCAGCGTGCAGGTGGTGCTGCTGTTCGCCTCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp ACGTACTGGGGGAACTCGTGCAGCTGGGCACCCCTCTaGAGGAAGCCAAGCACCGTGCCCATCTGGGCCATG +
Preference number: 6 (lower is better)
Translates to: TYWGNSCSWAPL*RKPSTVPIWAM
Trigger: CATGGCCCAGATGGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp AGGTGCGTCTTCACGTACTGGGGGAACTCGTGCAGCTaGGCACCCCTCTGGAGGAAGCCAAGCACCGTGCCC +
Preference number: 6 (lower is better)
Translates to: RCVFTYWGNSCS*APLWRKPSTVP
Trigger: GGGCACGGTGCTTGGCTTCCTCCAGAGGGGTGCCCAGCTGCACGAGTTCCCCCAGTACGTGAAGACGCACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp CCGCTGCTGTCGAACCGCAGCGGCAGCCCGCCCACGTaGAAGGTCAGGTTGTACATGTTCTCCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PLLSNRSGSPPT*KVRLYMFSRSC
Trigger: GCAGCTCCTGGAGAACATGTACAACCTGACCTTCCACGTGGGCGGGCTGCCGCTGCGGTTCGACAGCAGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CAA 72 bp CAGCGGATCTTCAGGCGCTCTGTCCTGAGGCTGCCGTaGAACCTGCCCACGTCGTGGAGCCTGGGCACTGAG +
Preference number: 6 (lower is better)
Translates to: QRIFRRSVLRLP*NLPTSWSLGTE
Trigger: CTCAGTGCCCAGGCTCCACGACGTGGGCAGGTTCAACGGCAGCCTCAGGACAGAGCGCCTGAAGATCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 72 bp GAAGCTGAAGAACTTGCCGGTGACCATGGCGAGCTCTaGCGAGTGGGGCCCGATGACAGCCAGCACACGGGG +
Preference number: 6 (lower is better)
Translates to: EAEELAGDHGEL*RVGPDDSQHTG
Trigger: CCCCGTGTGCTGGCTGTCATCGGGCCCCACTCGTCAGAGCTCGCCATGGTCACCGGCAAGTTCTTCAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 72 bp GGTGGTGATTTAGCCCTGCGCTCACGTTCTGCAGCGTaGTGCAGTCACACTGCGGGCAGCGCTGGCCCACCA +
Preference number: 6 (lower is better)
Translates to: GGDLALRSRSAA*CSHTAGSAGPP
Trigger: TGGTGGGCCAGCGCTGCCCGCAGTGTGACTGCATCACGCTGCAGAACGTGAGCGCAGGGCTAAATCACCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS TCA 72 bp GCCACTCAGCCGGTCTGCCCAGCTCAGAGGCAGTTCTaGCTCCACGAAGATCTCGGCCGCCTGCAGGAAGAG +
Preference number: 6 (lower is better)
Translates to: ATQPVCPAQRQF*LHEDLGRLQEE
Trigger: CTCTTCCTGCAGGCGGCCGAGATCTTCGTGGAGTCAGAACTGCCTCTGAGCTGGGCAGACCGGCTGAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp ACAGCTTCAGGTCGTACTCCATGTCCACGTTTCCGCTaGTGTCGAACCGCAGCGGCAGCCCGCCCACGTGGA +
Preference number: 6 (lower is better)
Translates to: TASGRTPCPRFR*CRTAAAARPRG
Trigger: TCCACGTGGGCGGGCTGCCGCTGCGGTTCGACAGCAGCGGAAACGTGGACATGGAGTACGACCTGAAGCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp GAGCACCGGGACACGGGCTTCTGGTTGTCAGACGTGTaGCAGCGGATCTTCAGGCGCTCTGTCCTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: EHRDTGFWLSDV*QRIFRRSVLRL
Trigger: CAGCCTCAGGACAGAGCGCCTGAAGATCCGCTGGCACACGTCTGACAACCAGAAGCCCGTGTCCCGGTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS GCA 72 bp AGGTGCAGGCGATGTCGTCTGGGTTTTGCCGGTAGCTaGCCGCCTCGCAGTCCACACAGTCGTAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: RCRRCRLGFAGS*PPRSPHSRSSR
Trigger: CCTGCTGCTACGACTGTGTGGACTGCGAGGCGGGCAGCTACCGGCAAAACCCAGACGACATCGCCTGCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp AAGAACTTGCCGGTGACCATGGCGAGCTCTGACGAGTaGGGCCCGATGACAGCCAGCACACGGGGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: KNLPVTMASSDE*GPMTASTRGWY
Trigger: GTACCAGCCCCGTGTGCTGGCTGTCATCGGGCCCCACTCGTCAGAGCTCGCCATGGTCACCGGCAAGTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CAA 72 bp CCCAGGCGCAGCCCGGGCAGCAGATCCGACTTGTTGTaGATCTCCTCCACGGCCATTTTCATGGCCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PRRSPGSRSDLL*ISSTAIFMASA
Trigger: GGCACTGGCCATGAAAATGGCCGTGGAGGAGATCAACAACAAGTCGGATCTGCTGCCCGGGCTGCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp AAGCAGCGTGTGCTTCGCTCCGGGGACCACTCATCCTaGCCACAAAAGGTGCAGGCGATGTCGTCTGGGTTT +
Preference number: 6 (lower is better)
Translates to: KQRVLRSGDHSS*PQKVQAMSSGF
Trigger: AAACCCAGACGACATCGCCTGCACCTTTTGTGGCCAGGATGAGTGGTCCCCGGAGCGAAGCACACGCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6
CDS CCA 72 bp CTAAGTCTGGGTTCACCGGGGCTGAGATCACAGGGTTaGGTCACTCATGTTTCCCCTGATTTCCTGTGTTCC +
Preference number: 6 (lower is better)
Translates to: LSLGSPGLRSQG*VTHVSPDFLCS
Trigger: GGAACACAGGAAATCAGGGGAAACATGAGTGACCCAACCCTGTGATCTCAGCCCCGGTGAACCCAGACTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339381.6