RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAS1R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173662

Ensembl transcript IDs: ENST00000333172.11, ENST00000351136.7, ENST00000411823.5, ENST00000415267.1

Found 301 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTaGTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGC +
Preference number: 1 (lower is better)
Translates to: NPRPRCPKTSRTPPA*STFDPQGREGCQPC
Trigger: GCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR GCA 90 bp TCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATaGCCAAAGACCTCCCGGACACCCCCGGCCTGCTCGACCTTCGAC +
Preference number: 1 (lower is better)
Translates to: SRLSQALTRPNPRPR*PKTSRTPPACSTFD
Trigger: GTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR CCA 90 bp AACCAAGGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTaGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCTGCCA +
Preference number: 1 (lower is better)
Translates to: NQGQRGPGVASTQAL*VPQRSHRGCHYLLP
Trigger: TGGCAGCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCTTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 90 bp ATGAAGCCCAGGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATaGGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACC +
Preference number: 1 (lower is better)
Translates to: MKPRELVSVHSSITR*GKRWYSLAGSGVHT
Trigger: GGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCCTGGGCTTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 90 bp GGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCAGCTaGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTT +
Preference number: 1 (lower is better)
Translates to: GSGVHTTSQVRQISS*AAELIITNRPAPWF
Trigger: AAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 90 bp GAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTaGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTT +
Preference number: 1 (lower is better)
Translates to: ELVSVHSSITRWGKR*YSLAGSGVHTTSQV
Trigger: AACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR GCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGCAGGGCAGAGAAGGCTaGCAGCCGTGCCTGCTGACC +
Preference number: 2 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRQGREG*QPCLLT
Trigger: GGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTG...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR-3UTR GCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAACGGACACCCCCGGCCTaGTCGACCTTCGACCCTCAG +
Preference number: 2 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQRTPPA*STFDPQ
Trigger: CTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR-3UTR GCA 90 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAAGAGCTGCCACTACCTGCTaGCAGGGAGCCCAGCATAAG +
Preference number: 2 (lower is better)
Translates to: GQRGPGVASTQALWVPQRAATTC*QGAQHK
Trigger: CTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGC...TCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR GCA 90 bp AGCTGGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTTTGGACCGAGGCTGCCACTACCTaGTGCCAGGGAGCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: SWAAELIITNRPAPWFWTEAATT*CQGAQH
Trigger: ATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGCCTC...GGTCCAAAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR TCA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAAAGCAGCTGGGCCGCTaGGCTGATCATCACAAACAG +
Preference number: 2 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVKQLGR*ADHHKQ
Trigger: CTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCTT...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR GCA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGGGAGTTGGTCTCTGTaGACTCAAGCATCACCAGAT +
Preference number: 2 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVGSWSL*TQASPD
Trigger: ATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR CCA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCAAGATGATGATTAGTTaGAATGAGCGAACTGTCAGG +
Preference number: 2 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISKMMIS*NERTVR
Trigger: CCTGACAGTTCGCTCATTCCAACTAATCATCATCTT...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR GCA 72 bp CCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTaGTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGC +
Preference number: 3 (lower is better)
Translates to: PRCPKTSRTPPA*STFDPQGREGC
Trigger: GCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR CCA 72 bp CAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTaGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTAC +
Preference number: 3 (lower is better)
Translates to: QRGPGVASTQAL*VPQRSHRGCHY
Trigger: GTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 72 bp GACAGGAAGATGGTGAAACCAAGGGCAAAGAGGGCCTaGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: DRKMVKPRAKRA*RSKHAGLVGSP
Trigger: TGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCTTGGTTTCACCATCTTCCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 72 bp TCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTaGTATTCCCTAGCAGGCAGTGGGGTCCACACCACC +
Preference number: 3 (lower is better)
Translates to: SVHSSITRWGKR*YSLAGSGVHTT
Trigger: GGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR-3UTR CAA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCAGCCAGCACCGTGGTTTaGGACCCAGGCGTGGTAGAA +
Preference number: 3 (lower is better)
Translates to: VSVHSSITRWGKRWYSLAASTVV*DPGVVE
Trigger: TTCTACCACGCCTGGGTCCAAAACCACGGTGCTGGC...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 72 bp AGGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATaGGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: RELVSVHSSITR*GKRWYSLAGSG
Trigger: CCCACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR TCA 72 bp GCAAGTCCTTACCCAGGTAGCTGCAGGCAAAGGCACTaGTGGAGAGGAGGCCATTGTAGAGGAAGGCCAGTA +
Preference number: 3 (lower is better)
Translates to: ASPYPGSCRQRH*WRGGHCRGRPV
Trigger: TACTGGCCTTCCTCTACAATGGCCTCCTCTCCATCAGTGCCTTTGCCTGCAGCTACCTGGGTAAGGACTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 72 bp GTCCACACCACCAGCCAAGTTAGACAGATAAGCAGCTaGGCCGCTGAGCTGATCATCACAAACAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: VHTTSQVRQISS*AAELIITNRPA
Trigger: TGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCTTATCTGTCTAACTTGGCTGGTGGTGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
3UTR CCA 72 bp GGTACCTTGGTGGAAAACTTGAAGATGATGATTAGTTaGAATGAGCGAACTGTCAGGCAGGACAGGAAGATG +
Preference number: 3 (lower is better)
Translates to: GTLVENLKMMIS*NERTVRQDRKM
Trigger: CATCTTCCTGTCCTGCCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCACCAAGGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCACGGTGGCCCCGGCCTaGGCCAGGTGGCGCATGAGG +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASTVAPA*ARWRMR
Trigger: CCTCATGCGCCACCTGGCCCAGGCCGGGGCCACCGT...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTCAGGCGGCCCCCTGCTaGCCTCACCACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPQAAPC*PHHRGV
Trigger: GACACCCCTGTGGTGAGGTCAGCAGGGGGCCGCCTG...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCTGGTACCCCAGGGTaGTGTTGGGCAGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: HPRPARPSTLRAEKAASRAGTPG*CWAAGP
Trigger: CGGCCCTGCTGCCCAACATCACCCTGGGGTACCAGC...ACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTACTGCCGCTTCACGCTaGGCGTCTCGCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPTAASR*ASRCWP
Trigger: CGGCCAGCAGCGAGACGCTCAGCGTGAAGCGGCAGT...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCCCGCAGGCAGGTACTTaGCGTCGTAGACGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRAPQAGT*RRRRWP
Trigger: CGGCCAGCGTCTACGACGGCAAGTACCTGCCTGCGG...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCGGGACAGCCCTCTTCTaGATGGCCACGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAGTALF*MATPST
Trigger: GGTGCTGGGCGTGGCCATCCAGAAGAGGGCTGTCCC...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCAGCCCAGGAGCTGGTaGAGGCCATGGGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASQPRSW*RPWATA
Trigger: TGCGGTGGCCCATGGCCTCCACCAGCTCCTGGGCTG...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTGTCCCGGGCACCCCAGTaGTGTGCCTGGAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: DLRPSGQRRLPAVPADPLSRAPQ*CAWRGP
Trigger: GGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGA...CAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTCAGGGCAGAGAAGGCTaGCAGCCGTGCCTGCTGACC +
Preference number: 4 (lower is better)
Translates to: PGLLDLRPSGQRRLPAVPQGREG*QPCLLT
Trigger: GGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTG...AGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCTCAGCAGGGCGGCTGTaGTGGCAGCACGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASSAGRL*WQHGWC
Trigger: GCACCAACCGTGCTGCCACCACAGCCGCCCTGCTGA...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp ACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGGGGCCAGGTGGCGCATaGGGCACTGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: TSQPQTAMPKDLPDTPGLGPGGA*GTASSH
Trigger: ATGAGAGGATGCAGTGCCTCATGCGCCACCTGGCCC...CAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGAGGGCCCAGGCTTCTaGGGCGACCCACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPEGPGF*GDPHLA
Trigger: GGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTC...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGCCAGCCGTGCCTGCTaGCCCACTGGTCAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AYTSQPQTAMPKDLPDTPASRAC*PTGQVE
Trigger: CTCCACCTGACCAGTGGGTCAGCAGGCACGGCTGGC...GGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCGTGCAGAGCAGCATaGTGGCCAGATGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: LLDLRPSGQRRLPAVPADPCRAA*WPDARA
Trigger: GGCGCGGGCATCTGGCCAGCATGCTGCTCTGCACGG...GTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCCAGGAAATGAGAAGCTaGAGGCCGACCAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAQEMRS*RPTRRA
Trigger: GGCTCGCCTGGTCGGCCTGCAGCTTCTCATTTCCTG...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACCGGACACCCCCGGCCTaGTCGACCTTCGACCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDRTPPA*STFDPQ
Trigger: CTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAGATGCCCGCGCCTaGCATGGCCAAGGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLDLRPSGQRRLPAVPADPDARA*HGQGVA
Trigger: GGCCACTCCTTGGCCATGCCAGGCGCGGGCATCTGG...GTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp AGATGGGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCACGGTGGCCCCGGCCTaGGCCAGGTGGCGCATGAGG +
Preference number: 4 (lower is better)
Translates to: RWGKRWYSLAGSGVHTTSTVAPA*ARWRMR
Trigger: CCTCATGCGCCACCTGGCCCAGGCCGGGGCCACCGT...GCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCGGTAGACTCGGCCCCTaGAACAAGCTCCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAGRLGP*NKLQRH
Trigger: GTGCCTCTGGAGCTTGTTCCAGGGGCCGAGTCTACC...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTAGGGCAAAGAGGGCCTaGCGTAGCAAGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPRAKRA*RSKHAG
Trigger: GCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCT...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCGCCCAGCCATCATGTTaGCCGCAGGCAGGTACTTGC +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAAQPSC*PQAGTC
Trigger: GCAAGTACCTGCCTGCGGCCAACATGATGGCTGGGC...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGTGGCAGCCCGGAGCCTaGTCTAGGCTCTCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRWQPGA*SRLSQA
Trigger: CGCCTGGGAGAGCCTAGACCAGGCTCCGGGCTGCCA...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAATCTCCGGGGAGGGTaGAGTCAGGAGAAGACTCCG +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAANLRGG*SQEKTP
Trigger: CGGAGTCTTCTCCTGACTTCACCCTCCCCGGAGATT...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCGACCAGGCGAGCCGTaGAGAGCAGCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AWSRLSQALTRPNPRPRCRPGEP*RAACWP
Trigger: TGGCCAGCATGCTGCTCTGCACGGCTCGCCTGGTCG...GCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCCAGGAGAAGACTCCGTaGTATGGCAGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAQEKTP*YGRQRP
Trigger: GGGCCTTTGCCTGCCATAGCACGGAGTCTTCTCCTG...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGTGGCGCATGAGGCACTaGATCCTCTCATCGCCCACC +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQWRMRH*ILSSPT
Trigger: GGTGGGCGATGAGAGGATGCAGTGCCTCATGCGCCA...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCCTCTGCAGAGCTGATTaGTGCTGCACCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAALCRAD*CCTRSP
Trigger: AGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCAGAG...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGAAGCCATAGAGGCTaGCACTACCTGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAARSHRG*HYLLPG
Trigger: CCCTGGCAGCAGGTAGTGGCAGCCTCTATGGCTTCT...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAACCCACCGAAGCCGCTaGTCAGGCTGCTCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPTHRSR*SGCSAQ
Trigger: CTGGGCTGAGCAGCCTGAGCAGCGGCTTCGGTGGGT...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTAACCCCAGACCGCGATaGCCAAAGACCTCCCGGACA +
Preference number: 4 (lower is better)
Translates to: HPRPARPSTLRAEKAASRNPRPR*PKTSRT
Trigger: TGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTT...ACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCGGCATGGCCAAGGAGTaGCCTCTAAGGAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRAGMAKE*PLRRPV
Trigger: AACTGGCCTCCTTAGAGGCCACTCCTTGGCCATGCC...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCTGACCTCAAACAACCACGACGGTaGCCCCGGCCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PAAREPSIRKHRRPPADLKQPRR*PRPGPG
Trigger: ACCTGGCCCAGGCCGGGGCCACCGTCGTGGTTGTTT...GAGGTCAGCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCCCTTGCCAGTCAGGTTaGTCAGCACCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAAPCQSG*SAPRTR
Trigger: TCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGG...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCCCCGTAACCACTCGCTaGTGCCCTTCAAGACAGTCG +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRAPVTTR*CPSRQS
Trigger: CGACTGTCTTGAAGGGCACCAGCGAGTGGTTACGGG...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCGCGGGAAGCAGGTCTaGCTTCCCTCAGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LHVPTPDRDAQRPPGHPRRGKQV*LPSGAH
Trigger: GTGGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCG...CCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGTTCCCTAGCAGGCAGTaGGGTCCACACCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQFPSRQ*GPHHQP
Trigger: TGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAA...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACGACCCACTGGTCAGGTaGAGCCGCAGCGCCTCGTGT +
Preference number: 4 (lower is better)
Translates to: STFDPQGREGCQPCLLTHDPLVR*SRSASC
Trigger: ACACGAGGCGCTGCGGCTCCACCTGACCAGTGGGTC...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTGCCTGCTGACCCACTaGTCAGGTGGAGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: STFDPQGREGCQPCLLTHCLLTH*SGGAAA
Trigger: CGCTGCGGCTCCACCTGACCAGTGGGTCAGCAGGCA...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GCCACTACCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCGGGCCAGGTGGCGCATaGGGCACTGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ATTCCQGAQHKKAQAAPCGPGGA*GTASSH
Trigger: ATGAGAGGATGCAGTGCCTCATGCGCCACCTGGCCC...GCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAAGAGAGGGCCCAGGCTTCTaGGGCGACCCACACCTTGCC +
Preference number: 4 (lower is better)
Translates to: GQRGPGVASTQALWVPQREGPGF*GDPHLA
Trigger: GGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTC...TCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCAAGCAGCTGGGCCGCTaGGCTGATCATCACAAACAG +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRAKQLGR*ADHHKQ
Trigger: CTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCTT...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp TCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCAGCATGCTGGCCAGATaGCCGCGCCTGGCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SPRRLHVPTPDRDAQRPPSMLAR*PRLAWP
Trigger: TGGCCATGCCAGGCGCGGGCATCTGGCCAGCATGCT...GGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTAGGCGACCCACACCTTaGCAGTCAGGTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PGLLDLRPSGQRRLPAVPRRPTP*QSGWSA
Trigger: TGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCT...AGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAACCAGCACCATCCCAATaGGCTGGATCCCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQPAPSQ*AGSRAP
Trigger: GGGTGCCCGGGATCCAGCGCATTGGGATGGTGCTGG...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGCTGCACCTTGTGGATCTaGTCCAAAAGCTGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RPNPRPRCPKTSRTPPACCTLWI*SKSCQG
Trigger: CCCCTGGCAGCTTTTGGAGCAGATCCACAAGGTGCA...GCAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp ACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGACAGGGGTGTCTAGGTaGCAGGCAAACAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TSQPQTAMPKDLPDTPGLTGVSR*QANRPA
Trigger: TGCTGGCCTGTTTGCCTGGCACCTAGACACCCCTGT...CAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGAGGCTGCCACTACCTaGTGCCAGGGAGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PRRLHVPTPDRDAQRPPGEAATT*CQGAQH
Trigger: ATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGCCTC...TCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGAAGACTCCGTGCTATaGCAGGCAAAGGCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PGLLDLRPSGQRRLPAVPEDSVL*QAKAQQ
Trigger: CTGCTGGGCCTTTGCCTGCCATAGCACGGAGTCTTC...AGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTCCTTGGAGCTCTATGTaGTGTTGCCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HPRPARPSTLRAEKAASRPWSSM*CCPGRE
Trigger: CTCCCTGCCAGGGCAACACCACATAGAGCTCCAAGG...ACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCTGGTGGCAGCACGGTTaGTGCTGTCAGGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASWWQHG*CCQAQS
Trigger: TGATTGGGCCTGACAGCACCAACCGTGCTGCCACCA...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCTCTCATCGCCCACCTaGGCAGAGAAGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQLSSPT*AEKGMM
Trigger: CATCATGCCCTTCTCTGCCCAGGTGGGCGATGAGAG...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGCCGGCCTGGGCCAGGTaGCGCATGAGGCACTGCATC +
Preference number: 4 (lower is better)
Translates to: SRLSQALTRPNPRPRCPKPAWAR*RMRHCI
Trigger: GATGCAGTGCCTCATGCGCCACCTGGCCCAGGCCGG...CTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATAAACAACCACGACGGTaGCCCCGGCCTGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDKQPRR*PRPGPG
Trigger: ACCTGGCCCAGGCCGGGGCCACCGTCGTGGTTGTTT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCAGCCCTCTTCTGGATaGCCACGCCCAGCACCATCC +
Preference number: 4 (lower is better)
Translates to: LHVPTPDRDAQRPPGHPRQPSSG*PRPAPS
Trigger: GGATGGTGCTGGGCGTGGCCATCCAGAAGAGGGCTG...CCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGCACCAGGAGCCCTTGTaGCAAGGCCTAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPHQEPL*QGLGAF
Trigger: GAAGGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTG...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp AGCTGGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTTTGGACCTCCCGGGCACCCCAGTaGTGTGCCTGGAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SWAAELIITNRPAPWFWTSRAPQ*CAWRGP
Trigger: GGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGA...GGTCCAAAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp CCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGCTGGGCCGCTGAGCTaGTCATCACAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRRLHVPTPDRDAQRPPGAGPLS*SSQTGQ
Trigger: CTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGC...TCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAGAGAGGGAACAGGCCTaGCAGGAGGTAATCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPEREQA*QEVISG
Trigger: CCCGGAGATTACCTCCTGGCAGGCCTGTTCCCTCTC...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp ACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGAGCTCTATGTGGTGTTaGCCTGGCAGGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: TSQPQTAMPKDLPDTPGLSSMWC*PGREST
Trigger: AGTGCTCTCCCTGCCAGGGCAACACCACATAGAGCT...CAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp ACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGGCCCATAGTCGTCACTaGTGCCAACCAGAGAGATCC +
Preference number: 4 (lower is better)
Translates to: TSQPQTAMPKDLPDTPGLAHSRH*CQPERS
Trigger: GGATCTCTCTGGTTGGCAGCAGTGACGACTATGGGC...CAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACGCTGCCACTACCTGCTaGCAGGGAGCCCAGCATAAG +
Preference number: 4 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDAATTC*QGAQHK
Trigger: CTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGC...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGATGCAGAGCAGCATGCTaGCCAGATGCCCGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGSPRRLHVPTPDRDAQRCRAAC*PDARAW
Trigger: CCAGGCGCGGGCATCTGGCCAGCATGCTGCTCTGCA...TCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATACCATCCCAATGCGCTaGATCCCGGGCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDTIPMR*IPGTPV
Trigger: CACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGCTGGTGGAGGCCATaGGCCACCGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQSWWRP*ATAYTA
Trigger: GGCTGTGTATGCGGTGGCCCATGGCCTCCACCAGCT...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCCAGCCCAGGAGCTGGTaGAGGCCATGGGCCACCGCA +
Preference number: 4 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCQPRSW*RPWATA
Trigger: TGCGGTGGCCCATGGCCTCCACCAGCTCCTGGGCTG...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGCACAGACTTAGGCACCTaGTTGTCCTTTCCGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RPNPRPRCPKTSRTPPACTDLGT*LSFPCH
Trigger: GTGGCACGGAAAGGACAACCAGGTGCCTAAGTCTGT...GCAGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAACAGGCCAGCACCGTaGTTTTGGACCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRNRPAP*FWTQAW
Trigger: CCACGCCTGGGTCCAAAACCACGGTGCTGGCCTGTT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTAGATGGGGGAAGCGCTaGTATTCCCTAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPRWGKR*YSLAGS
Trigger: ACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCT...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGGAACCGAGGACCGTaGAGGTCCACTTGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRRNRGP*RSTWVH
Trigger: ATGGACCCAAGTGGACCTTCACGGTCCTCGGTTCCT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCCACTCAAAGCAGCAGTaGTGGAAACCCGTAACCACT +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRAHSKQQ*WKPVTT
Trigger: AGTGGTTACGGGTTTCCATCACTGCTGCTTTGAGTG...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATAGTGCTCTGTGCTGTTaGGGTCTGGGCGGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDSALCC*GLGGRG
Trigger: TCCTCTGCCGCCCAGACCTCAACAGCACAGAGCACT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACTGGCAGCACGGTTGGTaGTGTCAGGCCCAATCACTG +
Preference number: 4 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDWQHGW*CQAQSL
Trigger: CAGTGATTGGGCCTGACAGCACCAACCGTGCTGCCA...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCTGACCTCTGGCAGCACGGTTGGTaGTGTCAGGCCCAATCACTG +
Preference number: 4 (lower is better)
Translates to: PAAREPSIRKHRRPPADLWQHGW*CQAQSL
Trigger: CAGTGATTGGGCCTGACAGCACCAACCGTGCTGCCA...GAGGTCAGCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp CCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAAGGGGCCTTCTTGTCTaGCCGGGCATAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRRLHVPTPDRDAQRPPGRGLLV*PGIGFF
Trigger: GAAGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCT...TCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GCCACTACCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCCTCTGCAGAGCTGATTaGTGCTGCACCAGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ATTCCQGAQHKKAQAAPCLCRAD*CCTRSP
Trigger: AGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCAGAG...GCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp CTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCAGCAGCGTGTTAGCTaGCAGCAGCACCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLDLRPSGQRRLPAVPADQQRVS*QQHPRG
Trigger: ACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCTG...GTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATAGCCGCTGCTCAGGCTaGTCAGCCCAGCCATCATGT +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDSRCSG*SAQPSC
Trigger: ACATGATGGCTGGGCTGAGCAGCCTGAGCAGCGGCT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGAGAAGGCTGCCAGCCGTaGCTGCTGACCCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: LGSPRRLHVPTPDRDAQREGCQP*LLTHWS
Trigger: TGACCAGTGGGTCAGCAGGCACGGCTGGCAGCCTTC...TCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCATGCAGACAGCCAGAATaGAGAGGGAACAGGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPCRQPE*RGNRPA
Trigger: GGCAGGCCTGTTCCCTCTCCATTCTGGCTGTCTGCA...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCAGAGCACTCTCAGCGTaGCATACACATTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PRPARPSTLRAEKAASRARALSA*HTHWQS
Trigger: ACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCT...GGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTCCTGGTACTTGTCATTaGGGATGGTGCGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPPGTCH*GWCAGK
Trigger: CTTTCCTGCGCACCATCCCCAATGACAAGTACCAGG...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGATCCCCTGACCAGTaGCCTGGTTCTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRRSPDQ*PGSPVP
Trigger: AGGCACTGGAGAACCAGGCCACTGGTCAGGGGATCT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAAGAACCATCCCAATGCGCTaGATCCCGGGCACCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GQRGPGVASTQALWVPQRTIPMR*IPGTPV
Trigger: CACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGT...TCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCGGGACAGCCCTCTTCTaGATGGCCACGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCGTALF*MATPST
Trigger: GGTGCTGGGCGTGGCCATCCAGAAGAGGGCTGTCCC...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTCACCAGGAGCCCTTGTaGCAAGGCCTAGGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GEALVFPSRQWGPHHQPSHQEPL*QGLGAF
Trigger: GAAGGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTG...ACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGTCAAGCATCACCAGATaGGGGAAGCGCTGGTATTCC +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQSSITR*GKRWYS
Trigger: GGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGA...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCATTCTCTGCAGAGCTaGTTGCTGCTGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLDLRPSGQRRLPAVPADHSLQS*LLLHQE
Trigger: CTCCTGGTGCAGCAGCAATCAGCTCTGCAGAGAATG...GTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATAGAGGTCACTCTTGTTaGGGAAGGTCCCAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDRGHSC*GRSQPH
Trigger: GTGGGGCTGGGACCTTCCTCAACAAGAGTGACCTCT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp TTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGTGCAGGCAAAGGCACTaGTGGAGAGGAGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LHVPTPDRDAQRPPGHPRCRQRH*WRGGHC
Trigger: ACAATGGCCTCCTCTCCATCAGTGCCTTTGCCTGCA...CCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp TTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGGTCAGGCCCAATCACTaGCAGCACCGTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: LHVPTPDRDAQRPPGHPRVRPNH*QHRRGI
Trigger: TATTCCCCTACGGTGCTGGCAGTGATTGGGCCTGAC...CCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAAGGAAAGAGGGATACTaGCGCTTCACGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPRKEGY*RFTLSV
Trigger: GACGCTCAGCGTGAAGCGGCAGTATCCCTCTTTCCT...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCTGACCTCGCCCATAGTCGTCACTaGTGCCAACCAGAGAGATCC +
Preference number: 4 (lower is better)
Translates to: PAAREPSIRKHRRPPADLAHSRH*CQPERS
Trigger: GGATCTCTCTGGTTGGCAGCAGTGACGACTATGGGC...GAGGTCAGCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTGTGCAGAGCTGATTGCTaGTGCACCAGGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: DLRPSGQRRLPAVPADPLCRADC*CTRSPC
Trigger: ACAAGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCA...CAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGTAACCACTCGCTGGTaGCCTTCAAGACAGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PRRLHVPTPDRDAQRPPGVTTRW*PSRQSL
Trigger: CAGCGACTGTCTTGAAGGGCACCAGCGAGTGGTTAC...TCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGAGCACCCAAGAGGTGTaGTCACGCAAAGCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQSTQEV*SRKAKN
Trigger: GTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCT...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTCACACATCATACAGCTaGTACCCCAGGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: HPRPARPSTLRAEKAASRHTSYS*YPRVML
Trigger: CAACATCACCCTGGGGTACCAGCTGTATGATGTGTG...ACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTATGTGGTGTTGCCCTaGCAGGGAGAGCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: STFDPQGREGCQPCLLTHYVVLP*QGEHSQ
Trigger: CTGAGAGTGCTCTCCCTGCCAGGGCAACACCACATA...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGACCATGGTCTCCACCTaGTACTTGTCATTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RTPPACSTFDPQGREGCQTMVST*YLSLGM
Trigger: CATCCCCAATGACAAGTACCAGGTGGAGACCATGGT...CTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGTGTGCTGTTGAGGTCTaGGCGGCAGAGGATCACGTA +
Preference number: 4 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPCAVEV*AAEDHV
Trigger: TACGTGATCCTCTGCCGCCCAGACCTCAACAGCACA...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
3UTR CAA 72 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTaGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCAC +
Preference number: 4 (lower is better)
Translates to: GQRGPGVASTQA*WVPQRSHRGCH
Trigger: GTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCATCGTGTGTGCCATaGAAGCTTGGCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPASCVP*KLGILC
Trigger: GCAGAGAATGCCAAGCTTTCATGGCACACACGATGC...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCATCATGGAGAAGGCTTTaGGCTTGGGCATCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPSWRRL*AWASCV
Trigger: CACACACGATGCCCAAGCTCAAAGCCTTCTCCATGA...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp TCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCAGAGGAAGGCCAGTATaGAGCCCAGGGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPRRLHVPTPDRDAQRPPRGRPV*SPGSWS
Trigger: AGACCAACTCCCTGGGCTTCATACTGGCCTTCCTCT...GGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGAGTCCACCCGAACTTCTaGAGCAGCAGCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: LGSPRRLHVPTPDRDAQRVHPNF*SSSTMV
Trigger: GACCATGGTGCTGCTGCTGCAGAAGTTCGGGTGGAC...TCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GCCGTGGTGAAGAAGGCGATCCAGGACACGAAGTTGAAGAGCAGGCTGAAGGTGCCAGCACCATCCCAATaGGCTGGATCCCGGGCACCC +
Preference number: 4 (lower is better)
Translates to: AVVKKAIQDTKLKSRLKVPAPSQ*AGSRAP
Trigger: GGGTGCCCGGGATCCAGCGCATTGGGATGGTGCTGG...CACCTTCAGCCTGCTCTTCAACTTCGTGTCCTGGATCGCCTTCTTCACCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp TCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGAGAGCTGATTGCTGCTaGACCAGGAGCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SRLSQALTRPNPRPRCPKRADCC*TRSPCG
Trigger: GCCACAAGGGCTCCTGGTGCAGCAGCAATCAGCTCT...CTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTTGGTTGTCCTTTCCGTaGCACTGGATTTTGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HPRPARPSTLRAEKAASRWLSFP*HWILVS
Trigger: TGAGACCAAAATCCAGTGGCACGGAAAGGACAACCA...ACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp TCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGCCAAAAACACCACAGTaGGCGGGAAGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRLSQALTRPNPRPRCPKPKTPQ*AGSRSG
Trigger: GCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTGG...CTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCGCGTGGCATACACATTaGCAGAGTCAGAACACACAT +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASAWHTH*QSQNTH
Trigger: ATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGC...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTCCTTGGAGCTCTATGTaGTGTTGCCCTGGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GEALVFPSRQWGPHHQPSPWSSM*CCPGRE
Trigger: CTCCCTGCCAGGGCAACACCACATAGAGCTCCAAGG...ACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAAGACTCTCATCGCCCACCTaGGCAGAGAAGGGCATGATG +
Preference number: 4 (lower is better)
Translates to: GQRGPGVASTQALWVPQRLSSPT*AEKGMM
Trigger: CATCATGCCCTTCTCTGCCCAGGTGGGCGATGAGAG...TCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACTCGAAAAACACCCTaGCCAACTGCCGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRTRKTP*PTAGWK
Trigger: TTTCCAGCCGGCAGTTGGCCAGGGTGTTTTTCGAGT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAGACAGATAAGCAGCTaGGCCGCTGAGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRRQISS*AAELII
Trigger: GATGATCAGCTCAGCGGCCCAGCTGCTTATCTGTCT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCAAGGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAGATGGGGGAAGCGCTaGTATTCCCTAGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PRAKRAWRSKHAGLVGSPRWGKR*YSLAGS
Trigger: ACTGCCTGCTAGGGAATACCAGCGCTTCCCCCATCT...TGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGTCGTGTAGTCCTGAATaGAGGCCTGGAAGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRSCSPE*RPGSAL
Trigger: CAGAGCACTTCCAGGCCTCCATTCAGGACTACACGA...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCATTTCACTTCTTTATTaGCAGCCCGGAGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GHPRPARPSTLRAEKAASISLLY*QPGAWS
Trigger: AGACCAGGCTCCGGGCTGCCAATAAAGAAGTGAAAT...GCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCGCTGGTACCCCAGGGTaGTGTTGGGCAGCAGGGCCG +
Preference number: 4 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISAGTPG*CWAAGP
Trigger: CGGCCCTGCTGCCCAACATCACCCTGGGGTACCAGC...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTAAGCAGCTGGGCCGCTaGGCTGATCATCACAAACAG +
Preference number: 4 (lower is better)
Translates to: GEALVFPSRQWGPHHQPSKQLGR*ADHHKQ
Trigger: CTGTTTGTGATGATCAGCTCAGCGGCCCAGCTGCTT...ACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GGGGAAGCGCTGGTATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTAGAGGAAGGCCAGTATaGAGCCCAGGGAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GEALVFPSRQWGPHHQPSRGRPV*SPGSWS
Trigger: AGACCAACTCCCTGGGCTTCATACTGGCCTTCCTCT...ACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATACCAGCGCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAACATAGTCGTCACTGCTaGCAACCAGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQHSRHC*QPERSR
Trigger: CCTGGATCTCTCTGGTTGGCAGCAGTGACGACTATG...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp AGCTGGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTTTGGACCTGGCGCATGAGGCACTaGATCCTCTCATCGCCCACC +
Preference number: 4 (lower is better)
Translates to: SWAAELIITNRPAPWFWTWRMRH*ILSSPT
Trigger: GGTGGGCGATGAGAGGATGCAGTGCCTCATGCGCCA...GGTCCAAAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCAGAGCTGATTGCTGCTaGACCAGGAGCCCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCRADCC*TRSPCG
Trigger: GCCACAAGGGCTCCTGGTGCAGCAGCAATCAGCTCT...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCAAGCTTGGCATTCTCTaGAGAGCTGATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AWSRLSQALTRPNPRPRCKLGIL*RADCCC
Trigger: GCAGCAGCAATCAGCTCTGCAGAGAATGCCAAGCTT...GCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCTTGGGCATCGTGTGTaGCATGAAAGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: AWSRLSQALTRPNPRPRCLGHRV*HESLAF
Trigger: GAATGCCAAGCTTTCATGGCACACACGATGCCCAAG...GCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp CCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCTGACCTCGGGAGTTGGTCTCTGTaGACTCAAGCATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: PAAREPSIRKHRRPPADLGSWSL*TQASPD
Trigger: ATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC...GAGGTCAGCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAATGGGCAGCAGGGCCGTaGAGTTGTTTATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQWAAGP*SCLSPQ
Trigger: TTGAGGAGATAAACAACTCCACGGCCCTGCTGCCCA...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CCAAGGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCATGGGCAGCAGGGCCGTaGAGTTGTTTATCTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PRAKRAWRSKHAGLVGSPWAAGP*SCLSPQ
Trigger: TTGAGGAGATAAACAACTCCACGGCCCTGCTGCCCA...TGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTTCAGCAGGGCGGCTGTaGTGGCAGCACGGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GSWSLCTQASPDGGSAGISAGRL*WQHGWC
Trigger: GCACCAACCGTGCTGCCACCACAGCCGCCCTGCTGA...AATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACTTGTCATTGGGGATaGTGCGCAGGAAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDTCHWG*CAGKRD
Trigger: ATCCCTCTTTCCTGCGCACCATCCCCAATGACAAGT...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GCCACTACCTGCTGCCAGGGAGCCCAGCATAAGAAAGCACAGGCGGCCCCCTGCACTTGTCATTGGGGATaGTGCGCAGGAAAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: ATTCCQGAQHKKAQAAPCTCHWG*CAGKRD
Trigger: ATCCCTCTTTCCTGCGCACCATCCCCAATGACAAGT...GCAGGGGGCCGCCTGTGCTTTCTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GCCGTGGTGAAGAAGGCGATCCAGGACACGAAGTTGAAGAGCAGGCTGAAGGTGCAGCCCTCTTCTGGATaGCCACGCCCAGCACCATCC +
Preference number: 4 (lower is better)
Translates to: AVVKKAIQDTKLKSRLKVQPSSG*PRPAPS
Trigger: GGATGGTGCTGGGCGTGGCCATCCAGAAGAGGGCTG...CACCTTCAGCCTGCTCTTCAACTTCGTGTCCTGGATCGCCTTCTTCACCACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAGGTAGCCATGCTCATTaGAGCTACAAGACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQGSHAH*SYKTCH
Trigger: GTGACAGGTCTTGTAGCTTCAATGAGCATGGCTACC...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp CCCGGACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCTTATGTTATAGCTACTaGGGGGATCTCTGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: PGHPRPARPSTLRAEKAALCYSY*GDLCCH
Trigger: ATGACAACAGAGATCCCCTCAGTAGCTATAACATAA...GGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGTCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACATACACAGCCCGGTATaGGTTGTAGGCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: STFDPQGREGCQPCLLTHIHSPV*VVGRTH
Trigger: ATGAGTTCTGCCTACAACGCATACCGGGCTGTGTAT...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR GCA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAGGGAGTTGGTCTCTGTaGACTCAAGCATCACCAGAT +
Preference number: 4 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQGSWSL*TQASPD
Trigger: ATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGCACCGGCCTGGGCCAGGTaGCGCATGAGGCACTGCATC +
Preference number: 4 (lower is better)
Translates to: DTFGLVVVLWQVLTQVAAPAWAR*RMRHCI
Trigger: GATGCAGTGCCTCATGCGCCACCTGGCCCAGGCCGG...TGCAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCAGGGCAAAGAGGGCCTaGCGTAGCAAGCACGCAGGC +
Preference number: 4 (lower is better)
Translates to: ELVSVHSSITRWGKRWYSRAKRA*RSKHAG
Trigger: GCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCCT...GGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTGCTCGTTGTAGTTCTCTaGCAAGTCCTTACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: DLRPSGQRRLPAVPADPLLVVVL*QVLTQV
Trigger: TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAG...CAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp AGCTGGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTTTGGACCTATGTGGTGTTGCCCTaGCAGGGAGAGCACTCTCAG +
Preference number: 4 (lower is better)
Translates to: SWAAELIITNRPAPWFWTYVVLP*QGEHSQ
Trigger: CTGAGAGTGCTCTCCCTGCCAGGGCAACACCACATA...GGTCCAAAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp TCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCAGGAAATGCACCTTGTaGATCTGCTCCAAAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SPRRLHVPTPDRDAQRPPRKCTL*ICSKSC
Trigger: GCAGCTTTTGGAGCAGATCCACAAGGTGCATTTCCT...GGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTCGTGCCACTGGATTTTaGTCTCATTTATGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPRATGF*SHLCLA
Trigger: AGCTAAACATAAATGAGACCAAAATCCAGTGGCACG...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTCGCGGGAAGCAGGTCTaGCTTCCCTCAGGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVARGKQV*LPSGAH
Trigger: GTGGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCG...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTAAGATGATGATTAGTTaGAATGAGCGAACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPKMMIS*NERTVR
Trigger: CCTGACAGTTCGCTCATTCCAACTAATCATCATCTT...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CCA 90 bp GATGGAGAGGAGGCCATTGTAGAGGAAGGCCAGTATGAAGCCCAGGGAGTTGGTTTCCCTAGCAGGCAGTaGGGTCCACACCACCAGCCA +
Preference number: 4 (lower is better)
Translates to: DGEEAIVEEGQYEAQGVGFPSRQ*GPHHQP
Trigger: TGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAA...ACCAACTCCCTGGGCTTCATACTGGCCTTCCTCTACAATGGCCTCCTCTCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp CTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACTCATTTATGTTTAGCTaGACTGGAGACCATGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLDLRPSGQRRLPAVPADSFMFS*TGDHVE
Trigger: CTCCACATGGTCTCCAGTTCAGCTAAACATAAATGA...GTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GCCGTGGTGAAGAAGGCGATCCAGGACACGAAGTTGAAGAGCAGGCTGAAGGTGTGCAGGCAAAGGCACTaGTGGAGAGGAGGCCATTGT +
Preference number: 4 (lower is better)
Translates to: AVVKKAIQDTKLKSRLKVCRQRH*WRGGHC
Trigger: ACAATGGCCTCCTCTCCATCAGTGCCTTTGCCTGCA...CACCTTCAGCCTGCTCTTCAACTTCGTGTCCTGGATCGCCTTCTTCACCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GCCGTGGTGAAGAAGGCGATCCAGGACACGAAGTTGAAGAGCAGGCTGAAGGTGAGGAAAGAGGGATACTaGCGCTTCACGCTGAGCGTC +
Preference number: 4 (lower is better)
Translates to: AVVKKAIQDTKLKSRLKVRKEGY*RFTLSV
Trigger: GACGCTCAGCGTGAAGCGGCAGTATCCCTCTTTCCT...CACCTTCAGCCTGCTCTTCAACTTCGTGTCCTGGATCGCCTTCTTCACCACGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCAGCAGCGTGTTAGCTaGCAGCAGCACCCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GSWSLCTQASPDGGSAGIQQRVS*QQHPRG
Trigger: ACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCTG...AATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GATGGAGAGGAGGCCATTGTAGAGGAAGGCCAGTATGAAGCCCAGGGAGTTGGTACAGGGGTGTCTAGGTaGCAGGCAAACAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DGEEAIVEEGQYEAQGVGTGVSR*QANRPA
Trigger: TGCTGGCCTGTTTGCCTGGCACCTAGACACCCCTGT...ACCAACTCCCTGGGCTTCATACTGGCCTTCCTCTACAATGGCCTCCTCTCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCGCTGCCACTACCTGCTaGCAGGGAGCCCAGCATAAG +
Preference number: 4 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISAATTC*QGAQHK
Trigger: CTTATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGC...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGCAGAGGCTGCCACTACCTaGTGCCAGGGAGCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: DTFGLVVVLWQVLTQVAAEAATT*CQGAQH
Trigger: ATGCTGGGCTCCCTGGCAGCAGGTAGTGGCAGCCTC...TGCAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCCACACATCATACAGCTaGTACCCCAGGGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCHTSYS*YPRVML
Trigger: CAACATCACCCTGGGGTACCAGCTGTATGATGTGTG...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCACCATGGTCTCCACCTaGTACTTGTCATTGGGGATG +
Preference number: 4 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCTMVST*YLSLGM
Trigger: CATCCCCAATGACAAGTACCAGGTGGAGACCATGGT...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCAAGATCCCCTGACCAGTaGCCTGGTTCTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VSVHSSITRWGKRWYSLARSPDQ*PGSPVP
Trigger: AGGCACTGGAGAACCAGGCCACTGGTCAGGGGATCT...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GATGGAGAGGAGGCCATTGTAGAGGAAGGCCAGTATGAAGCCCAGGGAGTTGGTCCTTGCCAGTCAGGTTaGTCAGCACCACGGACTCGA +
Preference number: 4 (lower is better)
Translates to: DGEEAIVEEGQYEAQGVGPCQSG*SAPRTR
Trigger: TCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGG...ACCAACTCCCTGGGCTTCATACTGGCCTTCCTCTACAATGGCCTCCTCTCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTAGCTGGTGGAGGCCATaGGCCACCGCATACACAGCC +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVASWWRP*ATAYTA
Trigger: GGCTGTGTATGCGGTGGCCCATGGCCTCCACCAGCT...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCATTCTCTGCAGAGCTaGTTGCTGCTGCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ELVSVHSSITRWGKRWYSHSLQS*LLLHQE
Trigger: CTCCTGGTGCAGCAGCAATCAGCTCTGCAGAGAATG...GGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCAAGCTCTATGTGGTGTTaGCCTGGCAGGGAGAGCACT +
Preference number: 4 (lower is better)
Translates to: VSVHSSITRWGKRWYSLASSMWC*PGREST
Trigger: AGTGCTCTCCCTGCCAGGGCAACACCACATAGAGCT...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GCCGTGGTGAAGAAGGCGATCCAGGACACGAAGTTGAAGAGCAGGCTGAAGGTGACTCGAAAAACACCCTaGCCAACTGCCGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: AVVKKAIQDTKLKSRLKVTRKTP*PTAGWK
Trigger: TTTCCAGCCGGCAGTTGGCCAGGGTGTTTTTCGAGT...CACCTTCAGCCTGCTCTTCAACTTCGTGTCCTGGATCGCCTTCTTCACCACGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATTCCTTTCCGTGCCACTaGATTTTGGTCTCATTTATG +
Preference number: 4 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDSFPCH*ILVSFM
Trigger: CATAAATGAGACCAAAATCCAGTGGCACGGAAAGGA...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR TCA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCATCATGGAGAAGGCTTTaGGCTTGGGCATCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VSVHSSITRWGKRWYSLASWRRL*AWASCV
Trigger: CACACACGATGCCCAAGCTCAAAGCCTTCTCCATGA...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp ACCTTGGTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCAGGCGGCCCCCTGCTaGCCTCACCACAGGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TLVENLKMMISWNERTVRQAAPC*PHHRGV
Trigger: GACACCCCTGTGGTGAGGTCAGCAGGGGGCCGCCTG...CCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCACCAAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTAGGGGCCTTCTTGTCTaGCCGGGCATAGGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVARGLLV*PGIGFF
Trigger: GAAGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCT...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTAGAAGCCATAGAGGCTaGCACTACCTGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVARSHRG*HYLLPG
Trigger: CCCTGGCAGCAGGTAGTGGCAGCCTCTATGGCTTCT...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTTGGTGGCAGCACGGTTaGTGCTGTCAGGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVAWWQHG*CCQAQS
Trigger: TGATTGGGCCTGACAGCACCAACCGTGCTGCCACCA...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCACCTGGTACTTGTCATTaGGGATGGTGCGCAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VSVHSSITRWGKRWYSLAPGTCH*GWCAGK
Trigger: CTTTCCTGCGCACCATCCCCAATGACAAGTACCAGG...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGGTAGACTCGGCCCCTaGAACAAGCTCCAGAGGCAC +
Preference number: 4 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVGRLGP*NKLQRH
Trigger: GTGCCTCTGGAGCTTGTTCCAGGGGCCGAGTCTACC...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAAACAGGCCAGCACCGTaGTTTTGGACCCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVNRPAP*FWTQAW
Trigger: CCACGCCTGGGTCCAAAACCACGGTGCTGGCCTGTT...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGTCAGGCCCAATCACTaGCAGCACCGTAGGGGAATA +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVAVRPNH*QHRRGI
Trigger: TATTCCCCTACGGTGCTGGCAGTGATTGGGCCTGAC...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGTCCACCCGAACTTCTaGAGCAGCAGCACCATGGTC +
Preference number: 4 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVVHPNF*SSSTMV
Trigger: GACCATGGTGCTGCTGCTGCAGAAGTTCGGGTGGAC...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCCATAGTCGTCACTGCTaGCAACCAGAGAGATCCAGG +
Preference number: 4 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISHSRHC*QPERSR
Trigger: CCTGGATCTCTCTGGTTGGCAGCAGTGACGACTATG...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGCATGCAGAGCTGATTGCTaGTGCACCAGGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: DTFGLVVVLWQVLTQVAACRADC*CTRSPC
Trigger: ACAAGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCA...TGCAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTAGCACCCAAGAGGTGTaGTCACGCAAAGCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GSWSLCTQASPDGGSAGISTQEV*SRKAKN
Trigger: GTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCT...AATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCTCAAGCATCACCAGATaGGGGAAGCGCTGGTATTCC +
Preference number: 4 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISSSITR*GKRWYS
Trigger: GGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGA...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTAAGCTTGGCATTCTCTaGAGAGCTGATTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVAKLGIL*RADCCC
Trigger: GCAGCAGCAATCAGCTCTGCAGAGAATGCCAAGCTT...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GACCCAGGCGTGGTAGAATGTAGGTACCTTGGTGGAAAACTTGAAGATGATGATCCAAAAACACCACAGTaGGCGGGAAGCAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: DPGVVECRYLGGKLEDDDPKTPQ*AGSRSG
Trigger: GCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTGG...ATCATCATCTTCAAGTTTTCCACCAAGGTACCTACATTCTACCACGCCTGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp ACCTTGGTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGGCTGGGCCGCTGAGCTaGTCATCACAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TLVENLKMMISWNERTVRAGPLS*SSQTGQ
Trigger: CTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGC...CCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCACCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGCAGCGTGGCATACACATTaGCAGAGTCAGAACACACAT +
Preference number: 4 (lower is better)
Translates to: DTFGLVVVLWQVLTQVAAAWHTH*QSQNTH
Trigger: ATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGC...TGCAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp ACCTTGGTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGAGGCGACCCACACCTTaGCAGTCAGGTTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: TLVENLKMMISWNERTVRRRPTP*QSGWSA
Trigger: TGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCT...CCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCACCAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GACCCAGGCGTGGTAGAATGTAGGTACCTTGGTGGAAAACTTGAAGATGATGATAGACAGATAAGCAGCTaGGCCGCTGAGCTGATCATC +
Preference number: 4 (lower is better)
Translates to: DPGVVECRYLGGKLEDDDRQISS*AAELII
Trigger: GATGATCAGCTCAGCGGCCCAGCTGCTTATCTGTCT...ATCATCATCTTCAAGTTTTCCACCAAGGTACCTACATTCTACCACGCCTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR TCA 90 bp GTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCAGGACGCATCGTGTGTGCCATaGAAGCTTGGCATTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VENLKMMISWNERTVRQDASCVP*KLGILC
Trigger: GCAGAGAATGCCAAGCTTTCATGGCACACACGATGC...GTCCTGCCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GACCCAGGCGTGGTAGAATGTAGGTACCTTGGTGGAAAACTTGAAGATGATGATAGAGCACTCTCAGCGTaGCATACACATTGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: DPGVVECRYLGGKLEDDDRALSA*HTHWQS
Trigger: ACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCT...ATCATCATCTTCAAGTTTTCCACCAAGGTACCTACATTCTACCACGCCTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCAGGACCTTGGGCATCGTGTGTaGCATGAAAGCTTGGCATTC +
Preference number: 4 (lower is better)
Translates to: VENLKMMISWNERTVRQDLGHRV*HESLAF
Trigger: GAATGCCAAGCTTTCATGGCACACACGATGCCCAAG...GTCCTGCCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR GCA 90 bp GTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCAGGACATACACAGCCCGGTATaGGTTGTAGGCAGAACTCAT +
Preference number: 4 (lower is better)
Translates to: VENLKMMISWNERTVRQDIHSPV*VVGRTH
Trigger: ATGAGTTCTGCCTACAACGCATACCGGGCTGTGTAT...GTCCTGCCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp ACCTTGGTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCTCGTTGTAGTTCTCTaGCAAGTCCTTACCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TLVENLKMMISWNERTVRLVVVL*QVLTQV
Trigger: TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAG...CCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCACCAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CCA 90 bp GTGGAAAACTTGAAGATGATGATTAGTTGGAATGAGCGAACTGTCAGGCAGGACAAGATGATGATTAGTTaGAATGAGCGAACTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VENLKMMISWNERTVRQDKMMIS*NERTVR
Trigger: CCTGACAGTTCGCTCATTCCAACTAATCATCATCTT...GTCCTGCCTGACAGTTCGCTCATTCCAACTAATCATCATCTTCAAGTTTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS GCA 90 bp ACACCCCCGGCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTaGCAGCCGTGCCTGCTGACCCACTGGTCAGGTGGAGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: TPPACSTFDPQGREG*QPCLLTHWSGGAAA
Trigger: CGCTGCGGCTCCACCTGACCAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGCCGGGGGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 90 bp CCACGCCCAGCACCATCCCAATGCGCTGGATCCCGGGCACCCCAGTaGTGTGCCTGGAGAGGGCCCAGGCTTCTGAGGCGACCCACACCT +
Preference number: 5 (lower is better)
Translates to: PRPAPSQCAGSRAPQ*CAWRGPRLLRRPTP
Trigger: AGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGTGCTGGGCGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 90 bp ACCACGACGGTGGCCCCGGCCTGGGCCAGGTGGCGCATGAGGCACTaGATCCTCTCATCGCCCACCTGGGCAGAGAAGGGCATGATGTCC +
Preference number: 5 (lower is better)
Translates to: TTTVAPAWARWRMRH*ILSSPTWAEKGMMS
Trigger: GGACATCATGCCCTTCTCTGCCCAGGTGGGCGATGAGAGGATGCAGTGCCTCATGCGCCACCTGGCCCAGGCCGGGGCCACCGTCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 90 bp GCCTGCTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTaGCTGCTGACCCACTGGTCAGGTGGAGCCGCAGCGCCTCGTGTA +
Preference number: 5 (lower is better)
Translates to: ACSTFDPQGREGCQP*LLTHWSGGAAAPRV
Trigger: TACACGAGGCGCTGCGGCTCCACCTGACCAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAGCAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGTGGTGGCAGCACGGTaGGTGCTGTCAGGCCCAATC +
Preference number: 5 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPVVAAR*VLSGPI
Trigger: GATTGGGCCTGACAGCACCAACCGTGCTGCCACCAC...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS CCA 90 bp ACAGCCCTCTTCTGGATGGCCACGCCCAGCACCATCCCAATGCGCTaGATCCCGGGCACCCCAGTGATGTGCCTGGAGAGGGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: TALFWMATPSTIPMR*IPGTPVMCLERAQA
Trigger: AGCCTGGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGTGCTGGGCGTGGCCATCCAGAAGAGGGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS-3UTR CAA 90 bp CACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGGCCTGCAAGCACGCAGGCCTaGTGGGTTCCCCAAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HVPTPDRDAQRPPGHPRPASTQA*WVPQRS
Trigger: GCTTCTTTGGGGAACCCACAAGGCCTGCGTGCTTGC...AGGCCGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 90 bp GATCCCGGGCACCCCAGTGATGTGCCTGGAGAGGGCCCAGGCTTCTaGGGCGACCCACACCTTGCCAGTCAGGTTGGTCAGCACCACGGA +
Preference number: 5 (lower is better)
Translates to: DPGHPSDVPGEGPGF*GDPHLASQVGQHHG
Trigger: TCCGTGGTGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS-3UTR CAA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACGAGGCGACCCACACCTaGCCAGTCAGGTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: STFDPQGREGCQPCLLTHEATHT*PVRLVS
Trigger: GCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTC...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGGAGCTCTATGTGGTGTaGCCCTGGCAGGGAGAGCAC +
Preference number: 5 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRELYVV*PWQGEH
Trigger: GTGCTCTCCCTGCCAGGGCAACACCACATAGAGCTC...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGACCTTGCCAGTCAGGTaGGTCAGCACCACGGACTCG +
Preference number: 5 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPTLPVR*VSTTDS
Trigger: CGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGT...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAGCCAGCACCGTGGTTTaGGACCCAGGCGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPASTVV*DPGVVE
Trigger: TTCTACCACGCCTGGGTCCAAAACCACGGTGCTGGC...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACACCCCCGAGCCCAGCCATCATGTaGGCCGCAGGCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: LTRPNPRPRCPKTSRTPPSPAIM*AAGRYL
Trigger: CAAGTACCTGCCTGCGGCCAACATGATGGCTGGGCT...CGGGGGTGTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS GCA 90 bp GCTGCACCAGGAGCCCTTGTGGCAAGGCCTAGGGGCCTTCTTGTCTaGCCGGGCATAGGCTTCTTCAAACGCCTTCAGGCCAGGGACAGC +
Preference number: 5 (lower is better)
Translates to: AAPGALVARPRGLLV*PGIGFFKRLQARDS
Trigger: GCTGTCCCTGGCCTGAAGGCGTTTGAAGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS-3UTR CAA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACGTCTCCACCTGGTACTaGTCATTGGGGATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDVSTWY*SLGMVR
Trigger: GCGCACCATCCCCAATGACAAGTACCAGGTGGAGAC...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 90 bp GAGAAGACTCCGTGCTATGGCAGGCAAAGGCCCAGCAGCAGGAAATaGGAAGCTGCAGGCCGACCAGGCGAGCCGTGCAGAGCAGCATGC +
Preference number: 5 (lower is better)
Translates to: EKTPCYGRQRPSSRK*EAAGRPGEPCRAAC
Trigger: GCATGCTGCTCTGCACGGCTCGCCTGGTCGGCCTGCAGCTTCTCATTTCCTGCTGCTGGGCCTTTGCCTGCCATAGCACGGAGTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS GCA 90 bp GGCGGCTGTGGTGGCAGCACGGTTGGTGCTGTCAGGCCCAATCACTaGCAGCACCGTAGGGGAATAGTGGAGAAGGTCTCCTTGGAGCTC +
Preference number: 5 (lower is better)
Translates to: GGCGGSTVGAVRPNH*QHRRGIVEKVSLEL
Trigger: GAGCTCCAAGGAGACCTTCTCCACTATTCCCCTACGGTGCTGGCAGTGATTGGGCCTGACAGCACCAACCGTGCTGCCACCACAGCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS-3UTR CAA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGCAGGGCCGTGGAGTaGTTTATCTCCTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQSRAVE*FISSTP
Trigger: TGGGGTTGAGGAGATAAACAACTCCACGGCCCTGCT...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACGTGGAGAAGGTCTCCTaGGAGCTCTATGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: STFDPQGREGCQPCLLTHVEKVS*ELYVVL
Trigger: CAACACCACATAGAGCTCCAAGGAGACCTTCTCCAC...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACGTGTGCCATGAAAGCTaGGCATTCTCTGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDVCHES*AFSAEL
Trigger: CAGCTCTGCAGAGAATGCCAAGCTTTCATGGCACAC...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp GGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAGAGAAGGCTTTGAGCTaGGGCATCGTGTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: GLGSPRRLHVPTPDRDAQEKALS*GIVCAM
Trigger: CATGGCACACACGATGCCCAAGCTCAAAGCCTTCTC...TTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp TCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGGACTTAGGCACCTGGTaGTCCTTTCCGTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: SRLSQALTRPNPRPRCPKDLGTW*SFPCHW
Trigger: CCAGTGGCACGGAAAGGACAACCAGGTGCCTAAGTC...CTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCGCAAGCACGCAGGCCTaGTGGGTTCCCCAAAGAAGC +
Preference number: 5 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCASTQA*WVPQRS
Trigger: GCTTCTTTGGGGAACCCACAAGGCCTGCGTGCTTGC...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCGCCAGCACCGTGGTTTaGGACCCAGGCGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCASTVV*DPGVVE
Trigger: TTCTACCACGCCTGGGTCCAAAACCACGGTGCTGGC...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp TCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCATGAAGCCCAGGGAGTaGGTCTCTGTGCACTCAAGC +
Preference number: 5 (lower is better)
Translates to: SPRRLHVPTPDRDAQRPPMKPRE*VSVHSS
Trigger: GCTTGAGTGCACAGAGACCAACTCCCTGGGCTTCAT...GGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACCATTTCACTTCTTTATaGGCAGCCCGGAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDHFTSL*AARSLV
Trigger: GACCAGGCTCCGGGCTGCCAATAAAGAAGTGAAATG...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS GCA 90 bp GGTTCTCCAGTGCCTGCACCCCTAGCTGCCCATAGTCGTCACTGCTaGCAACCAGAGAGATCCAGGTCCACCCGAACTTCTGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: GSPVPAPLAAHSRHC*QPERSRSTRTSAAA
Trigger: TGCTGCTGCAGAAGTTCGGGTGGACCTGGATCTCTCTGGTTGGCAGCAGTGACGACTATGGGCAGCTAGGGGTGCAGGCACTGGAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 90 bp AGCAGCAGCAGCAGCGTGTTAGCTGCCAGCAGCACCCAAGAGGTGTaGTCACGCAAAGCCAAAAACACCACAGTGCGCGGGAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SSSSSVLAASSTQEV*SRKAKNTTVRGKQV
Trigger: GACCTGCTTCCCGCGCACTGTGGTGTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCTGCTGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS GCA 90 bp CAGGCCAGCAGTCCCAAGCAGCAGCAGCAGCAGCAGCGTGTTAGCTaGCAGCAGCACCCAAGAGGTGTGCTCACGCAAAGCCAAAAACAC +
Preference number: 5 (lower is better)
Translates to: QASSPKQQQQQQRVS*QQHPRGVLTQSQKH
Trigger: GTGTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCTGCTGCTGCTGCTGCTTGGGACTGCTGGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS-3UTR CAA 90 bp CTCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCAAGCGTGGCATACACATaGGCAGAGTCAGAACACACA +
Preference number: 5 (lower is better)
Translates to: LDLRPSGQRRLPAVPADPSVAYT*AESEHT
Trigger: TGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCT...TGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp GAGCCTGGTCTAGGCTCTCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATACCTGGTACTTGTCATaGGGGATGGTGCGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: EPGLGSPRRLHVPTPDRDTWYLS*GMVRRK
Trigger: TTTCCTGCGCACCATCCCCAATGACAAGTACCAGGT...ATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGAGAGCCTAGACCAGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp TCCCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGAAGGGCATGATGTCCTaGAAAGCAATGCAGATCCCC +
Preference number: 5 (lower is better)
Translates to: SQALTRPNPRPRCPKTSRKGMMS*KAMQIP
Trigger: GGGGATCTGCATTGCTTTCAAGGACATCATGCCCTT...CCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp GGGCAAAGAGGGCCTGGCGTAGCAAGCACGCAGGCCTTGTGGGTTCCCCAAAGAGAGAAGGCTTTGAGCTaGGGCATCGTGTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: GQRGPGVASTQALWVPQREKALS*GIVCAM
Trigger: CATGGCACACACGATGCCCAAGCTCAAAGCCTTCTC...TCTTTGGGGAACCCACAAGGCCTGCGTGCTTGCTACGCCAGGCCCTCTTTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp CCAGGCGCTTACACGTCCCAACCCCAGACCGCGATGCCCAAAGACCTCCCGGACCTGAGGGGATCTCTGTaGTCATTAAACGCCACAGTG +
Preference number: 5 (lower is better)
Translates to: PGAYTSQPQTAMPKDLPDLRGSL*SLNATV
Trigger: CACTGTGGCGTTTAATGACAACAGAGATCCCCTCAG...GTCCGGGAGGTCTTTGGGCATCGCGGTCTGGGGTTGGGACGTGTAAGCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 90 bp TTGGGCATCGTGTGTGCCATGAAAGCTTGGCATTCTCTGCAGAGCTaGTTGCTGCTGCACCAGGAGCCCTTGTGGCAAGGCCTAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LGIVCAMKAWHSLQS*LLLHQEPLWQGLGA
Trigger: GGCCCCTAGGCCTTGCCACAAGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCAGAGAATGCCAAGCTTTCATGGCACACACGATGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 90 bp GCAGCACCCAAGAGGTGTGCTCACGCAAAGCCAAAAACACCACAGTaGGCGGGAAGCAGGTCTGGCTTCCCTCAGGTGCCCACTCTTCTT +
Preference number: 5 (lower is better)
Translates to: AAPKRCAHAKPKTPQ*AGSRSGFPQVPTLL
Trigger: AAGAAGAGTGGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS-3UTR CAA 90 bp GATGGAGAGGAGGCCATTGTAGAGGAAGGCCAGTATGAAGCCCAGGGAGTTGGTGTGGTGGCAGCACGGTaGGTGCTGTCAGGCCCAATC +
Preference number: 5 (lower is better)
Translates to: DGEEAIVEEGQYEAQGVGVVAAR*VLSGPI
Trigger: GATTGGGCCTGACAGCACCAACCGTGCTGCCACCAC...ACCAACTCCCTGGGCTTCATACTGGCCTTCCTCTACAATGGCCTCCTCTCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTCCCTAGCAGAGGCGACCCACACCTaGCCAGTCAGGTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VSVHSSITRWGKRWYSLAEATHT*PVRLVS
Trigger: GCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTC...TGCTAGGGAATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACTGAGAAGGAAATGCACCTaGTGGATCTGCTCCAAAAGC +
Preference number: 5 (lower is better)
Translates to: DLRPSGQRRLPAVPADPLRRKCT*WICSKS
Trigger: GCTTTTGGAGCAGATCCACAAGGTGCATTTCCTTCT...CAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 90 bp TTGAGGAAGGTCCCAGCCCCACAGGGCACACACTCAAAGCAGCAGTaGTGGAAACCCGTAACCACTCGCTGGTGCCCTTCAAGACAGTCG +
Preference number: 5 (lower is better)
Translates to: LRKVPAPQGTHSKQQ*WKPVTTRWCPSRQS
Trigger: CGACTGTCTTGAAGGGCACCAGCGAGTGGTTACGGGTTTCCATCACTGCTGCTTTGAGTGTGTGCCCTGTGGGGCTGGGACCTTCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000415267.1
CDS GCA 90 bp TCATTGAAGCTACAAGACCTGTCACACAGGGTCACCTCGGGTCTGTaGCTCACCTGCAGACAGCCAGAATGGAGAGGGAACAGGCCTGCC +
Preference number: 5 (lower is better)
Translates to: SLKLQDLSHRVTSGL*LTCRQPEWRGNRPA
Trigger: GGCAGGCCTGTTCCCTCTCCATTCTGGCTGTCTGCAGGTGAGGCACAGACCCGAGGTGACCCTGTGTGACAGGTCTTGTAGCTTCAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS GCA 90 bp CAAAAACACCACAGTGCGCGGGAAGCAGGTCTGGCTTCCCTCAGGTaGCCACTCTTCTTTCCCACAAGGCTGGCATCTGTAGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: QKHHSAREAGLASLR*PLFFPTRLASVEVC
Trigger: GCAGACCTCTACAGATGCCAGCCTTGTGGGAAAGAAGAGTGGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp TCGACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTGCCTGCTGACCCACCCGTGCCACTGGATTTaGGTCTCATTTATGTTTAGC +
Preference number: 5 (lower is better)
Translates to: STFDPQGREGCQPCLLTHPCHWI*VSFMFS
Trigger: GCTAAACATAAATGAGACCAAAATCCAGTGGCACGG...GTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS-3UTR CAA 90 bp AGCTGGGCCGCTGAGCTGATCATCACAAACAGGCCAGCACCGTGGTTTTGGACCATGAAGCCCAGGGAGTaGGTCTCTGTGCACTCAAGC +
Preference number: 5 (lower is better)
Translates to: SWAAELIITNRPAPWFWTMKPRE*VSVHSS
Trigger: GCTTGAGTGCACAGAGACCAACTCCCTGGGCTTCAT...GGTCCAAAACCACGGTGCTGGCCTGTTTGTGATGATCAGCTCAGCGGCCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS GCA 90 bp CAAAAACACCACAGTGCGCGGGAAGCAGGTCTGGCTTCCCTCAGGTaGCCACTCTTCTTTCCCACAAGGCTGGCATCTGTAGAGGTCACT +
Preference number: 5 (lower is better)
Translates to: QKHHSAREAGLASLR*PLFFPTRLASVEVT
Trigger: AGTGACCTCTACAGATGCCAGCCTTGTGGGAAAGAAGAGTGGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS-3UTR CAA 90 bp GCACGCAGGCCTTGTGGGTTCCCCAAAGAAGCCATAGAGGCTGCCACTACCTGCAGCGTGGCATACACATaGGCAGAGTCAGAACACACA +
Preference number: 5 (lower is better)
Translates to: ARRPCGFPKEAIEAATTCSVAYT*AESEHT
Trigger: TGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCT...GCAGGTAGTGGCAGCCTCTATGGCTTCTTTGGGGAACCCACAAGGCCTGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGTCTCCACCTGGTACTaGTCATTGGGGATGGTGCGC +
Preference number: 5 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVAVSTWY*SLGMVR
Trigger: GCGCACCATCCCCAATGACAAGTACCAGGTGGAGAC...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GAAGGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAACCTTGCCAGTCAGGTaGGTCAGCACCACGGACTCG +
Preference number: 5 (lower is better)
Translates to: EGDTFGLVVVLWQVLTQVTLPVR*VSTTDS
Trigger: CGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGT...TACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp TATTCCCTAGCAGGCAGTGGGGTCCACACCACCAGCCAAGTTAGACAGATAAGCGTGGAGAAGGTCTCCTaGGAGCTCTATGTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: YSLAGSGVHTTSQVRQISVEKVS*ELYVVL
Trigger: CAACACCACATAGAGCTCCAAGGAGACCTTCTCCAC...GCTTATCTGTCTAACTTGGCTGGTGGTGTGGACCCCACTGCCTGCTAGGGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GGGAGTTGGTCTCTGTGCACTCAAGCATCACCAGATGGGGGAAGCGCTGGTATTAAGGGCATGATGTCCTaGAAAGCAATGCAGATCCCC +
Preference number: 5 (lower is better)
Translates to: GSWSLCTQASPDGGSAGIKGMMS*KAMQIP
Trigger: GGGGATCTGCATTGCTTTCAAGGACATCATGCCCTT...AATACCAGCGCTTCCCCCATCTGGTGATGCTTGAGTGCACAGAGACCAACTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGCAACCTGGTACTTGTCATaGGGGATGGTGCGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: DTFGLVVVLWQVLTQVAATWYLS*GMVRRK
Trigger: TTTCCTGCGCACCATCCCCAATGACAAGTACCAGGT...TGCAGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS-3UTR CAA 90 bp GGTGACACATTTGGCCTCGTTGTAGTTCTCTGGCAAGTCCTTACCCAGGTAGCTGTGTGCCATGAAAGCTaGGCATTCTCTGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: GDTFGLVVVLWQVLTQVAVCHES*AFSAEL
Trigger: CAGCTCTGCAGAGAATGCCAAGCTTTCATGGCACAC...AGCTACCTGGGTAAGGACTTGCCAGAGAACTACAACGAGGCCAAATGTGTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS TCA 90 bp TTGTCCTTTCCGTGCCACTGGATTTTGGTCTCATTTATGTTTAGCTaGACTGGAGACCATGTGGAGGAACCGAGGACCGTGAAGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LSFPCHWILVSFMFS*TGDHVEEPRTVKVH
Trigger: GTGGACCTTCACGGTCCTCGGTTCCTCCACATGGTCTCCAGTTCAGCTAAACATAAATGAGACCAAAATCCAGTGGCACGGAAAGGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000415267.1
CDS-3UTR CAA 90 bp GACCCAGGCGTGGTAGAATGTAGGTACCTTGGTGGAAAACTTGAAGATGATGATAGCAGGGCCGTGGAGTaGTTTATCTCCTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: DPGVVECRYLGGKLEDDDSRAVE*FISSTP
Trigger: TGGGGTTGAGGAGATAAACAACTCCACGGCCCTGCT...ATCATCATCTTCAAGTTTTCCACCAAGGTACCTACATTCTACCACGCCTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411823.5
CDS GCA 72 bp GCTGCAGGCCGACCAGGCGAGCCGTGCAGAGCAGCATaGTGGCCAGATGCCCGCGCCTGGCATGGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: AAGRPGEPCRAA*WPDARAWHGQG
Trigger: TCCTTGGCCATGCCAGGCGCGGGCATCTGGCCAGCATGCTGCTCTGCACGGCTCGCCTGGTCGGCCTGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS GCA 72 bp GTGGCCCCGGCCTGGGCCAGGTGGCGCATGAGGCACTaGATCCTCTCATCGCCCACCTGGGCAGAGAAGGGC +
Preference number: 6 (lower is better)
Translates to: VAPAWARWRMRH*ILSSPTWAEKG
Trigger: GCCCTTCTCTGCCCAGGTGGGCGATGAGAGGATGCAGTGCCTCATGCGCCACCTGGCCCAGGCCGGGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp GCAGGCCGACCAGGCGAGCCGTGCAGAGCAGCATGCTaGCCAGATGCCCGCGCCTGGCATGGCCAAGGAGTG +
Preference number: 6 (lower is better)
Translates to: AGRPGEPCRAAC*PDARAWHGQGV
Trigger: CACTCCTTGGCCATGCCAGGCGCGGGCATCTGGCCAGCATGCTGCTCTGCACGGCTCGCCTGGTCGGCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS GCA 72 bp ACCTTCGACCCTCAGGGCAGAGAAGGCTGCCAGCCGTaGCTGCTGACCCACTGGTCAGGTGGAGCCGCAGCG +
Preference number: 6 (lower is better)
Translates to: TFDPQGREGCQP*LLTHWSGGAAA
Trigger: CGCTGCGGCTCCACCTGACCAGTGGGTCAGCAGGCACGGCTGGCAGCCTTCTCTGCCCTGAGGGTCGAAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333172.11
CDS TCA 72 bp GCACCATCCCAATGCGCTGGATCCCGGGCACCCCAGTaGTGTGCCTGGAGAGGGCCCAGGCTTCTGAGGCGA +
Preference number: 6 (lower is better)
Translates to: APSQCAGSRAPQ*CAWRGPRLLRR
Trigger: TCGCCTCAGAAGCCTGGGCCCTCTCCAGGCACATCACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp CCGTGCAGAGCAGCATGCTGGCCAGATGCCCGCGCCTaGCATGGCCAAGGAGTGGCCTCTAAGGAGGCCAGT +
Preference number: 6 (lower is better)
Translates to: PCRAACWPDARA*HGQGVASKEAS
Trigger: ACTGGCCTCCTTAGAGGCCACTCCTTGGCCATGCCAGGCGCGGGCATCTGGCCAGCATGCTGCTCTGCACGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS CCA 72 bp AAAACAACCACGACGGTGGCCCCGGCCTGGGCCAGGTaGCGCATGAGGCACTGCATCCTCTCATCGCCCACC +
Preference number: 6 (lower is better)
Translates to: KTTTTVAPAWAR*RMRHCILSSPT
Trigger: GGTGGGCGATGAGAGGATGCAGTGCCTCATGCGCCACCTGGCCCAGGCCGGGGCCACCGTCGTGGTTGTTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp TTCTGGATGGCCACGCCCAGCACCATCCCAATGCGCTaGATCCCGGGCACCCCAGTGATGTGCCTGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FWMATPSTIPMR*IPGTPVMCLER
Trigger: CCTCTCCAGGCACATCACTGGGGTGCCCGGGATCCAGCGCATTGGGATGGTGCTGGGCGTGGCCATCCAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS TCA 72 bp CACCCCAGTGATGTGCCTGGAGAGGGCCCAGGCTTCTaGGGCGACCCACACCTTGCCAGTCAGGTTGGTCAG +
Preference number: 6 (lower is better)
Translates to: HPSDVPGEGPGF*GDPHLASQVGQ
Trigger: CTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTCCAGGCACATCACTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp CAAACGCCTTCAGGCCAGGGACAGCCCTCTTCTGGATaGCCACGCCCAGCACCATCCCAATGCGCTGGATCC +
Preference number: 6 (lower is better)
Translates to: QTPSGQGQPSSG*PRPAPSQCAGS
Trigger: GGATCCAGCGCATTGGGATGGTGCTGGGCGTGGCCATCCAGAAGAGGGCTGTCCCTGGCCTGAAGGCGTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CAA 72 bp AAAGGGCTCAGCAGGGCGGCTGTGGTGGCAGCACGGTaGGTGCTGTCAGGCCCAATCACTGCCAGCACCGTA +
Preference number: 6 (lower is better)
Translates to: KGLSRAAVVAAR*VLSGPITASTV
Trigger: TACGGTGCTGGCAGTGATTGGGCCTGACAGCACCAACCGTGCTGCCACCACAGCCGCCCTGCTGAGCCCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 90 bp GAGAGGGCCCAGGCTTCTGAGGCGACCCACACCTTGCCAGTCAGGTaGGTCAGCACCACGGACTCGAAAAACACCCTGGCCAACTGCCGG +
Preference number: 6 (lower is better)
Translates to: ERAQASEATHTLPVR*VSTTDSKNTLANCR
Trigger: CCGGCAGTTGGCCAGGGTGTTTTTCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 72 bp GGAGCCCTTGTGGCAAGGCCTAGGGGCCTTCTTGTCTaGCCGGGCATAGGCTTCTTCAAACGCCTTCAGGCC +
Preference number: 6 (lower is better)
Translates to: GALVARPRGLLV*PGIGFFKRLQA
Trigger: GGCCTGAAGGCGTTTGAAGAAGCCTATGCCCGGGCAGACAAGAAGGCCCCTAGGCCTTGCCACAAGGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CAA 90 bp GTGATGTGCCTGGAGAGGGCCCAGGCTTCTGAGGCGACCCACACCTaGCCAGTCAGGTTGGTCAGCACCACGGACTCGAAAAACACCCTG +
Preference number: 6 (lower is better)
Translates to: VMCLERAQASEATHT*PVRLVSTTDSKNTL
Trigger: CAGGGTGTTTTTCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTCCAGGCACATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 72 bp GGTGGCAGCACGGTTGGTGCTGTCAGGCCCAATCACTaGCAGCACCGTAGGGGAATAGTGGAGAAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GGSTVGAVRPNH*QHRRGIVEKVS
Trigger: GGAGACCTTCTCCACTATTCCCCTACGGTGCTGGCAGTGATTGGGCCTGACAGCACCAACCGTGCTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS GCA 72 bp TTGTCATTGGGGATGGTGCGCAGGAAAGAGGGATACTaGCGCTTCACGCTGAGCGTCTCGCTGCTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: LSLGMVRRKEGY*RFTLSVSLLAA
Trigger: TGCGGCCAGCAGCGAGACGCTCAGCGTGAAGCGGCAGTATCCCTCTTTCCTGCGCACCATCCCCAATGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 72 bp CCAGTGCCTGCACCCCTAGCTGCCCATAGTCGTCACTaGTGCCAACCAGAGAGATCCAGGTCCACCCGAACT +
Preference number: 6 (lower is better)
Translates to: PVPAPLAAHSRH*CQPERSRSTRT
Trigger: AGTTCGGGTGGACCTGGATCTCTCTGGTTGGCAGCAGTGACGACTATGGGCAGCTAGGGGTGCAGGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 72 bp TGGAGAGGGCCCAGGCTTCTGAGGCGACCCACACCTTaGCAGTCAGGTTGGTCAGCACCACGGACTCGAAAA +
Preference number: 6 (lower is better)
Translates to: WRGPRLLRRPTP*QSGWSAPRTRK
Trigger: TTTTCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTGGGCCCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS GCA 72 bp AGTCCCAAGCAGCAGCAGCAGCAGCAGCGTGTTAGCTaGCAGCAGCACCCAAGAGGTGTGCTCACGCAAAGC +
Preference number: 6 (lower is better)
Translates to: SPKQQQQQQRVS*QQHPRGVLTQS
Trigger: GCTTTGCGTGAGCACACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCTGCTGCTGCTGCTGCTTGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS CAA 72 bp CAGGCTTCTGAGGCGACCCACACCTTGCCAGTCAGGTaGGTCAGCACCACGGACTCGAAAAACACCCTGGCC +
Preference number: 6 (lower is better)
Translates to: QASEATHTLPVR*VSTTDSKNTLA
Trigger: GGCCAGGGTGTTTTTCGAGTCCGTGGTGCTGACCAACCTGACTGGCAAGGTGTGGGTCGCCTCAGAAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS TCA 72 bp GGAACAGGCCTGCCAGGAGGTAATCTCCGGGGAGGGTaGAGTCAGGAGAAGACTCCGTGCTATGGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: GTGLPGGNLRGG*SQEKTPCYGRQ
Trigger: TTGCCTGCCATAGCACGGAGTCTTCTCCTGACTTCACCCTCCCCGGAGATTACCTCCTGGCAGGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS TCA 72 bp GTCCCAGCCCCACAGGGCACACACTCAAAGCAGCAGTaGTGGAAACCCGTAACCACTCGCTGGTGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: VPAPQGTHSKQQ*WKPVTTRWCPS
Trigger: TGAAGGGCACCAGCGAGTGGTTACGGGTTTCCATCACTGCTGCTTTGAGTGTGTGCCCTGTGGGGCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000415267.1
CDS GCA 72 bp AAGAGGTGTGCTCACGCAAAGCCAAAAACACCACAGTaGGCGGGAAGCAGGTCTGGCTTCCCTCAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: KRCAHAKPKTPQ*AGSRSGFPQVP
Trigger: GGGCACCTGAGGGAAGCCAGACCTGCTTCCCGCGCACTGTGGTGTTTTTGGCTTTGCGTGAGCACACCTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS GCA 72 bp AGCAGCGTGTTAGCTGCCAGCAGCACCCAAGAGGTGTaGTCACGCAAAGCCAAAAACACCACAGTGCGCGGG +
Preference number: 6 (lower is better)
Translates to: SSVLAASSTQEV*SRKAKNTTVRG
Trigger: CCCGCGCACTGTGGTGTTTTTGGCTTTGCGTGAGCACACCTCTTGGGTGCTGCTGGCAGCTAACACGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
CDS CAA 90 bp CCCAATCACTGCCAGCACCGTAGGGGAATAGTGGAGAAGGTCTCCTaGGAGCTCTATGTGGTGTTGCCCTGGCAGGGAGAGCACTCTCAG +
Preference number: 6 (lower is better)
Translates to: PNHCQHRRGIVEKVS*ELYVVLPWQGEHSQ
Trigger: CTGAGAGTGCTCTCCCTGCCAGGGCAACACCACATAGAGCTCCAAGGAGACCTTCTCCACTATTCCCCTACGGTGCTGGCAGTGATTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS GCA 72 bp CTACAAGACCTGTCACACAGGGTCACCTCGGGTCTGTaGCTCACCTGCAGACAGCCAGAATGGAGAGGGAAC +
Preference number: 6 (lower is better)
Translates to: LQDLSHRVTSGL*LTCRQPEWRGN
Trigger: GTTCCCTCTCCATTCTGGCTGTCTGCAGGTGAGGCACAGACCCGAGGTGACCCTGTGTGACAGGTCTTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS GCA 72 bp GTGGAGGCCATGGGCCACCGCATACACAGCCCGGTATaGGTTGTAGGCAGAACTCATGGAGAAGGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: VEAMGHRIHSPV*VVGRTHGEGFE
Trigger: CTCAAAGCCTTCTCCATGAGTTCTGCCTACAACGCATACCGGGCTGTGTATGCGGTGGCCCATGGCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CAA 72 bp TGCCAGCACCGTAGGGGAATAGTGGAGAAGGTCTCCTaGGAGCTCTATGTGGTGTTGCCCTGGCAGGGAGAG +
Preference number: 6 (lower is better)
Translates to: CQHRRGIVEKVS*ELYVVLPWQGE
Trigger: CTCTCCCTGCCAGGGCAACACCACATAGAGCTCCAAGGAGACCTTCTCCACTATTCCCCTACGGTGCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 90 bp TGGTGTTGCCCTGGCAGGGAGAGCACTCTCAGCGTGGCATACACATaGGCAGAGTCAGAACACACATCATACAGCTGGTACCCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: WCCPGRESTLSVAYT*AESEHTSYSWYPRV
Trigger: CACCCTGGGGTACCAGCTGTATGATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCTCCCTGCCAGGGCAACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 90 bp CGTAGGGGAATAGTGGAGAAGGTCTCCTTGGAGCTCTATGTGGTGTaGCCCTGGCAGGGAGAGCACTCTCAGCGTGGCATACACATTGGC +
Preference number: 6 (lower is better)
Translates to: RRGIVEKVSLELYVV*PWQGEHSQRGIHIG
Trigger: GCCAATGTGTATGCCACGCTGAGAGTGCTCTCCCTGCCAGGGCAACACCACATAGAGCTCCAAGGAGACCTTCTCCACTATTCCCCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 90 bp AACTTCTGCAGCAGCAGCACCATGGTCTCCACCTGGTACTTGTCATaGGGGATGGTGCGCAGGAAAGAGGGATACTGCCGCTTCACGCTG +
Preference number: 6 (lower is better)
Translates to: NFCSSSTMVSTWYLS*GMVRRKEGYCRFTL
Trigger: CAGCGTGAAGCGGCAGTATCCCTCTTTCCTGCGCACCATCCCCAATGACAAGTACCAGGTGGAGACCATGGTGCTGCTGCTGCAGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp AATGGAGGCCTGGAAGTGCTCTGTGCTGTTGAGGTCTaGGCGGCAGAGGATCACGTAGCACTTAGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: NGGLEVLCAVEV*AAEDHVALRQK
Trigger: TTTCTGCCTAAGTGCTACGTGATCCTCTGCCGCCCAGACCTCAACAGCACAGAGCACTTCCAGGCCTCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000351136.7
CDS CAA 90 bp CATGGAGAAGGCTTTGAGCTTGGGCATCGTGTGTGCCATGAAAGCTaGGCATTCTCTGCAGAGCTGATTGCTGCTGCACCAGGAGCCCTT +
Preference number: 6 (lower is better)
Translates to: HGEGFELGHRVCHES*AFSAELIAAAPGAL
Trigger: AAGGGCTCCTGGTGCAGCAGCAATCAGCTCTGCAGAGAATGCCAAGCTTTCATGGCACACACGATGCCCAAGCTCAAAGCCTTCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS CCA 72 bp CTGGCAGGGAGAGCACTCTCAGCGTGGCATACACATTaGCAGAGTCAGAACACACATCATACAGCTGGTACC +
Preference number: 6 (lower is better)
Translates to: LAGRALSAWHTH*QSQNTHHTAGT
Trigger: GGTACCAGCTGTATGATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCTCCCTGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CCA 72 bp TGTGGTGTTGCCCTGGCAGGGAGAGCACTCTCAGCGTaGCATACACATTGGCAGAGTCAGAACACACATCAT +
Preference number: 6 (lower is better)
Translates to: CGVALAGRALSA*HTHWQSQNTHH
Trigger: ATGATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCTCCCTGCCAGGGCAACACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 72 bp CCTGGCAGGGAGAGCACTCTCAGCGTGGCATACACATaGGCAGAGTCAGAACACACATCATACAGCTGGTAC +
Preference number: 6 (lower is better)
Translates to: PGRESTLSVAYT*AESEHTSYSWY
Trigger: GTACCAGCTGTATGATGTGTGTTCTGACTCTGCCAATGTGTATGCCACGCTGAGAGTGCTCTCCCTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS CAA 72 bp GGCTTTGAGCTTGGGCATCGTGTGTGCCATGAAAGCTaGGCATTCTCTGCAGAGCTGATTGCTGCTGCACCA +
Preference number: 6 (lower is better)
Translates to: GFELGHRVCHES*AFSAELIAAAP
Trigger: TGGTGCAGCAGCAATCAGCTCTGCAGAGAATGCCAAGCTTTCATGGCACACACGATGCCCAAGCTCAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333172.11
ENST00000411823.5
CDS TCA 72 bp AGTCAGAACACACATCATACAGCTGGTACCCCAGGGTaGTGTTGGGCAGCAGGGCCGTGGAGTTGTTTATCT +
Preference number: 6 (lower is better)
Translates to: SQNTHHTAGTPG*CWAAGPWSCLS
Trigger: AGATAAACAACTCCACGGCCCTGCTGCCCAACATCACCCTGGGGTACCAGCTGTATGATGTGTGTTCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000411823.5
ENST00000415267.1
CDS TCA 72 bp CCGTGCCACTGGATTTTGGTCTCATTTATGTTTAGCTaGACTGGAGACCATGTGGAGGAACCGAGGACCGTG +
Preference number: 6 (lower is better)
Translates to: PCHWILVSFMFS*TGDHVEEPRTV
Trigger: CACGGTCCTCGGTTCCTCCACATGGTCTCCAGTTCAGCTAAACATAAATGAGACCAAAATCCAGTGGCACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333172.11
ENST00000351136.7
ENST00000415267.1