RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TARS3 (Homo sapiens)

Ensembl gene IDs: ENSG00000185418

Ensembl transcript IDs: ENST00000335968.8, ENST00000539112.5, ENST00000558533.5, ENST00000559492.1, ENST00000560150.1, ENST00000615656.1

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCATCAGTGGCTCCAAAGTCGTAGAAGT +
Preference number: 1 (lower is better)
Translates to: NFVHVSYTFIVSFLS*GHEWTHQWLQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
3UTR CCA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTaGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATATTGT +
Preference number: 1 (lower is better)
Translates to: AKEWTPDPCEPARTF*NVGKKFVLSSDPYC
Trigger: ACAATATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR CCA 90 bp CGTGAAGTCCCGTTTGTGATATTCCTCCTTAGAATAAGAGATCACTaGGTTTGTGCATTTAAGTGCCTTTACAGTTTGGTGACCCTCACA +
Preference number: 1 (lower is better)
Translates to: REVPFVIFLLRIRDH*VCAFKCLYSLVTLT
Trigger: TGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATCTCTTATTCTAAGGAGGAATATCACAAACGGGACTTCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SATRSSSPFSAEAMSGPISQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR CCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
3UTR-3UTR TCA 90 bp GCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: ASSALSVRVFLRFFSLSMSQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...CATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR CCA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACACAAGGCATTGATTGCTaGAAAATTTCCCACGTGCCC +
Preference number: 2 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTQGIDC*KISHVP
Trigger: GGGCACGTGGGAAATTTTCCAGCAATCAATGCCTTG...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000558533.5
3UTR-3UTR CCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCCAAGGCATTGATTGCTaGAAAATTTCCCACGTGCCC +
Preference number: 2 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIQGIDC*KISHVP
Trigger: GGGCACGTGGGAAATTTTCCAGCAATCAATGCCTTG...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000558533.5
3UTR-3UTR TCA 90 bp ACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCAT +
Preference number: 2 (lower is better)
Translates to: TKLHRSKYQGRTSKGLLSVSFLS*GHEWTH
Trigger: ATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGAC...GCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR CCA 90 bp AGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: RTSKGLLSIECPCLPEILEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...AAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp GGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: GQNKVTQKQISGKDFKRPSQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...AGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACCAGATTCCACAAAACTaGATTCCTTTGTCAGTAATC +
Preference number: 2 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHQIPQN*IPLSVI
Trigger: GATTACTGACAAAGGAATTCAGTTTTGTGGAATCTG...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
3UTR-3UTR GCA 90 bp TTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGGGAAAATTTCCCACGTaGCCTCTAAACGTCCCCCGT +
Preference number: 2 (lower is better)
Translates to: LHRSKYQGRTSKGLLSIEGKFPT*PLNVPR
Trigger: ACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCC...CTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CCA 90 bp GCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 2 (lower is better)
Translates to: ASSALSVRVFLRFFSLSMEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...CATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp TTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGGAGAGAGCACCTCCGTaGAGTCCCGTTTGTGATATT +
Preference number: 2 (lower is better)
Translates to: LHRSKYQGRTSKGLLSIEERAPP*SPVCDI
Trigger: AATATCACAAACGGGACTTCACGGAGGTGCTCTCTC...CTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR GCA 90 bp GGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTGTTTGTGCATTTAAGTaGCTTTACAGTTTGGTGACC +
Preference number: 2 (lower is better)
Translates to: GRTSKGLLSIECPCLPEIVCAFK*LYSLVT
Trigger: GGTCACCAAACTGTAAAGGCACTTAAATGCACAAAC...AATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR CAA 90 bp ACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATaGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGGCA +
Preference number: 2 (lower is better)
Translates to: TEANIREGLQKASSA*SVRVFLRFFSLSMA
Trigger: TGCCATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTGTGTCCGTGTCTTCCTaGGATTCTTCAGTTTATCAA +
Preference number: 2 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLVSVSS*DSSVYQ
Trigger: TTGATAAACTGAAGAATCTCAGGAAGACACGGACAC...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTGACAATTCATGGGTTTaGGGGCAAAAGTGTCCTTTT +
Preference number: 2 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLDNSWV*GQKCPF
Trigger: AAAAGGACACTTTTGCCCTCAAACCCATGAATTGTC...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR TCA 90 bp TTTAAGGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCAT +
Preference number: 2 (lower is better)
Translates to: FKGQNKVTQKQISGKDFKVSFLS*GHEWTH
Trigger: ATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGAC...TTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR-3UTR TCA 90 bp TTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGGTGTCCGTGTCTTCCTaGGATTCTTCAGTTTATCAA +
Preference number: 2 (lower is better)
Translates to: LHRSKYQGRTSKGLLSIEVSVSS*DSSVYQ
Trigger: TTGATAAACTGAAGAATCTCAGGAAGACACGGACAC...CTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
3UTR CAA 90 bp CAGCCTCATTCCACATCTCAATCTCTCCTAGGAAGTTTTCCGGCCTaGTTGACAGGTTTAATTGAAAGGAGAAGCCAAATGTTGAGTAAA +
Preference number: 2 (lower is better)
Translates to: QPHSTSQSLLGSFPA*LTGLIERRSQMLSK
Trigger: TTTACTCAACATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCCTAGGAGAGATTGAGATGTGGAATGAGGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CCA 90 bp CTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCAAGATCGTGGACGATaGGCAAACATTAGACAGTGC +
Preference number: 2 (lower is better)
Translates to: LKSLHEFCCLLFARLQHYQDRGR*ANIRQC
Trigger: GCACTGTCTAATGTTTGCCCATCGTCCACGATCTTG...ATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR TCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAATTTTAATTCAGTTCTaGGCACGTAGAGCATTCCTC +
Preference number: 2 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGILIQF*ARRAFL
Trigger: GAGGAATGCTCTACGTGCTCAGAACTGAATTAAAAT...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
3UTR-3UTR TCA 90 bp CTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATTTTAGTGTACAACTGTaGTCCAAGTCAACGTCAGCC +
Preference number: 2 (lower is better)
Translates to: LKSLHEFCCLLFARLQHYFSVQL*SKSTSA
Trigger: GGCTGACGTTGACTTGGATCACAGTTGTACACTAAA...ATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CCA 90 bp CTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCCAGCCAGAACTTTCTaGAATGTGGGTAAAAAGTTT +
Preference number: 2 (lower is better)
Translates to: LKSLHEFCCLLFARLQHYPARTF*NVGKKF
Trigger: AAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGG...ATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR TCA 72 bp CGTCCTGCTGGAAGCGCCTCACTCTGGTCAAGCCGCTaGGAGTCCCCGACAGTTCATTTCTATGCAGAACTC +
Preference number: 3 (lower is better)
Translates to: RPAGSASLWSSR*ESPTVHFYAEL
Trigger: GAGTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGGCGCTTCCAGCAGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR TCA 72 bp CATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCATCAGTGGCTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: HVSYTFIVSFLS*GHEWTHQWLQS
Trigger: ACTTTGGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
3UTR CCA 72 bp TGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTaGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGAC +
Preference number: 3 (lower is better)
Translates to: WTPDPCEPARTF*NVGKKFVLSSD
Trigger: GTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR-3UTR CAA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACAAAGTTTCTCAAGGCATaGATTGCTGGAAAATTTCCC +
Preference number: 3 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTKFLKA*IAGKFP
Trigger: GGGAAATTTTCCAGCAATCAATGCCTTGAGAAACTT...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000558533.5
3UTR-3UTR CAA 90 bp CCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCATTTCTATGCAGAACGAATTTTGTTGTCTCTaGTTCGCACGTTTACAGCAT +
Preference number: 3 (lower is better)
Translates to: PHSGQAAESPRQFISMQNEFCCL*FARLQH
Trigger: ATGCTGTAAACGTGCGAACAAGAGACAACAAAATTC...GTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR CCA 72 bp CAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTaGGTAAAAAGTTTGTTCTCTCTAGTGACCCATATT +
Preference number: 3 (lower is better)
Translates to: QTHASQPELSGM*VKSLFSLVTHI
Trigger: AATATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR CCA 72 bp AATCTAATAGGCATTTCCCTCCAAGATCGTGGACGATaGGCAAACATTAGACAGTGCCCTGGACAATTCATG +
Preference number: 3 (lower is better)
Translates to: NLIGISLQDRGR*ANIRQCPGQFM
Trigger: CATGAATTGTCCAGGGCACTGTCTAATGTTTGCCCATCGTCCACGATCTTGGAGGGAAATGCCTATTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CAA 90 bp AAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTTTACTGTTGTACATATaGGGAGAGAGCACCTCCGTG +
Preference number: 3 (lower is better)
Translates to: KLHRSKYQGRTSKGLLSILLLYI*GESTSV
Trigger: CACGGAGGTGCTCTCTCCCAATATGTACAACAGTAA...AATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR GCA 72 bp CTTAGAATAAGAGATCACTGGGTTTGTGCATTTAAGTaGCTTTACAGTTTGGTGACCCTCACAATCAGGCCC +
Preference number: 3 (lower is better)
Translates to: LRIRDHWVCAFK*LYSLVTLTIRP
Trigger: GGGCCTGATTGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATCTCTTATTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CAA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTATGTGGGTAAAAAGTTaGTTCTCTCTAGTGACCCAT +
Preference number: 3 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLMWVKS*FSLVTH
Trigger: ATGGGTCACTAGAGAGAACAAACTTTTTACCCACAT...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR-3UTR CAA 90 bp GGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCCAGAGTTTACTGTaGTACATATTGGGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: GSKQSYTEANIREGLQKASQSLL*YILGES
Trigger: GCTCTCTCCCAATATGTACAACAGTAAACTCTGGGA...GGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR CCA 72 bp CCGTTTGTGATATTCCTCCTTAGAATAAGAGATCACTaGGTTTGTGCATTTAAGTGCCTTTACAGTTTGGTG +
Preference number: 3 (lower is better)
Translates to: PFVIFLLRIRDH*VCAFKCLYSLV
Trigger: CACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATCTCTTATTCTAAGGAGGAATATCACAAACGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
3UTR-3UTR CAA 90 bp CTGAATTCCTTTGTCAGTAATCCAATATTTAGCAGTAGCTGCTGCTTTTGTGGTAAGTTTCTCAAGGCATaGATTGCTGGAAAATTTCCC +
Preference number: 3 (lower is better)
Translates to: LNSFVSNPIFSSSCCFCGKFLKA*IAGKFP
Trigger: GGGAAATTTTCCAGCAATCAATGCCTTGAGAAACTT...ACCACAAAAGCAGCAGCTACTGCTAAATATTGGATTACTGACAAAGGAATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACCTCTCCAGCGTGGCCTaGCGGCTCCGCTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHLSSVA*RLRSSA
Trigger: CGCCGAGGAGCGGAGCCGCCAGGCCACGCTGGAGAG...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCCGGATGTCCTCCTCCTaGCGCTCCAGGCGCGACGCC +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGRMSSS*RSRRDA
Trigger: GGCGTCGCGCCTGGAGCGGCAGGAGGAGGACATCCG...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTTCTCGGCCCGGAGCTaGGCCACCTCCCGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGFSARS*ATSRVR
Trigger: CCTCACGCGGGAGGTGGCGCAGCTCCGGGCCGAGAA...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTGTGCGCCGGCCTCCTaGGCCGCCTCTAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPICAPAS*AASSSA
Trigger: CGCGGAGCTAGAGGCGGCGCAGGAGGCCGGCGCACA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCACTAGGAGGAGGCTGTaGGCCGGCCTCCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGTRRRL*AGLLRR
Trigger: GCGGCGCAGGAGGCCGGCGCACAGCCTCCTCCTAGT...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCCCGCGCTCTCCAGCGTaGCCTGGCGGCTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIPRSPA*PGGSAP
Trigger: AGGAGCGGAGCCGCCAGGCCACGCTGGAGAGCGCGG...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp GTCCTGCTGGAAGCGCCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCCTCTGGTCAAGCCGCTaGGAGTCCCCGACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: VLLEAPHSGQAAESPRQFLWSSR*ESPTVH
Trigger: ATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAG...GAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGGCGCTTCCAGCAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACAGGCACAGCCGCAGGCTaGACAGGCGGTGGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTGTAAG*TGGGAG
Trigger: ACCTGCGCCACCGCCTGTGCAGCCTGCGGCTGTGCC...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCACTAGGAGGAGGCTGTaGGCCGGCCTCCTGCGCCGC +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPITRRRL*AGLLRR
Trigger: GCGGCGCAGGAGGCCGGCGCACAGCCTCCTCCTAGT...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp AGCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTAGGCTGCACAGGCGGTaGCGCAGGTCGCAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SQGVDTRPMRASQNFLECRLHRR*RRSQFS
Trigger: CGAGAACTGCGACCTGCGCCACCGCCTGTGCAGCCT...ACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp GACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCCTCTCCAGCGTGGCCTaGCGGCTCCGCTCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: DPCEPARTFWNVGKKFVLLSSVA*RLRSSA
Trigger: CGCCGAGGAGCGGAGCCGCCAGGCCACGCTGGAGAG...GAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCGCCTCCCCAAGAATGTaGGCACTGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSASPRM*ALECQY
Trigger: GTACTGGCACTCCAGTGCTCACATTCTTGGGGAGGC...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCCTCTGGTCAAGCCGCTaGGAGTCCCCGACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSLWSSR*ESPTVH
Trigger: ATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAG...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSSQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AKEWTPDPCEPARTFWNVSQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...CACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp CACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTTGTGCGCCGGCCTCCTaGGCCGCCTCTAGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: HRSKYQGRTSKGLLSIECCAPAS*AASSSA
Trigger: CGCGGAGCTAGAGGCGGCGCAGGAGGCCGGCGCACA...ACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGTCCTTGTCTTGGCTTTaGCTAGGAGGAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: AKEWTPDPCEPARTFWNVSLSWL*LGGGCA
Trigger: CGCACAGCCTCCTCCTAGTCAAAGCCAAGACAAGGA...CACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACATTGGCCCCACAGGGATaGCCATCACCTGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTLAPQG*PSPDEE
Trigger: CTCCTCGTCAGGTGATGGTCATCCCTGTGGGGCCAA...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGAGTCCCCTTCCAATaGGCGGTCCAGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIRVPFQ*AVQVPQ
Trigger: CTGTGGGACCTGGACCGCCCATTGGAAGGGGACTCT...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCCTCTGGTCAAGCCGCTaGGAGTCCCCGACAGTTCAT +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPILWSSR*ESPTVH
Trigger: ATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAG...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHVSFLS*GHEWTH
Trigger: ATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGAC...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp CAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTCTCGGCCCGGAGCTaGGCCACCTCCCGCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QSYTEANIREGLQKASSAFSARS*ATSRVR
Trigger: CCTCACGCGGGAGGTGGCGCAGCTCCGGGCCGAGAA...TGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGTTCCAGACTTCCCCTTaGACTGTTTGCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: AKEWTPDPCEPARTFWNVFQTSP*TVCPSA
Trigger: GGCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAA...CACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp AGCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGATGACCATCACCTaGCGAGGAGATAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SQGVDTRPMRASQNFLECGMTIT*RGDSQK
Trigger: TTTCTGGCTATCTCCTCGTCAGGTGATGGTCATCCC...ACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTTCCTTGTCTTGGCTTTaGCTAGGAGGAGGCTGTGCG +
Preference number: 4 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSSLSWL*LGGGCA
Trigger: CGCACAGCCTCCTCCTAGTCAAAGCCAAGACAAGGA...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCGAGAGAGCACCTCCGTaGAGTCCCGTTTGTGATATT +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGERAPP*SPVCDI
Trigger: AATATCACAAACGGGACTTCACGGAGGTGCTCTCTC...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCGGGATGACCATCACCTaGCGAGGAGATAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIGMTIT*RGDSQK
Trigger: TTTCTGGCTATCTCCTCGTCAGGTGATGGTCATCCC...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTTCCAGACTTCCCCTTaGACTGTTTGCCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIFQTSP*TVCPSA
Trigger: GGCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCCTTTGGCTATTACCGTaGTTTCAGCCAGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSLWLLP*FQPVPD
Trigger: GTCAGGAACTGGCTGAAAGCACGGTAATAGCCAAAG...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp CCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCATTTCTATGCAGAACGGAAAATTTCCCACGTaGCCTCTAAACGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PHSGQAAESPRQFISMQNGKFPT*PLNVPR
Trigger: ACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCC...GTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CCA 90 bp AGCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SQGVDTRPMRASQNFLECEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...ACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCCCCACAGTTCACCATTaGCTTTGGCTATTACCGTGC +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIPTVHH*LWLLPC
Trigger: GCACGGTAATAGCCAAAGTCAATGGTGAACTGTGGG...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCGAGAGAGCACCTCCGTaGAGTCCCGTTTGTGATATT +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIERAPP*SPVCDI
Trigger: AATATCACAAACGGGACTTCACGGAGGTGCTCTCTC...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACCCCAAAATGGCTCGATaGATGATCACAGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHPKMAR*MITGLF
Trigger: GAAGAGACCTGTGATCATTCATCGAGCCATTTTGGG...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCTTTAGTGTACAACTGTaGTCCAAGTCAACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSFSVQL*SKSTSA
Trigger: GGCTGACGTTGACTTGGATCACAGTTGTACACTAAA...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp TGGCAGAAGTTACTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTCGGATGTCCTCCTCCTaGCGCTCCAGGCGCGACGCC +
Preference number: 4 (lower is better)
Translates to: WQKLLKSLHEFCCLLFARRMSSS*RSRRDA
Trigger: GGCGTCGCGCCTGGAGCGGCAGGAGGAGGACATCCG...ACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAGTAACTTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCATCAAGCTGTTCTaGAGTTGCTTCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGSIKLF*SCFSAS
Trigger: TGAGGCTGAGAAGCAACTGCAGAACAGCTTGATGGA...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCCAAGATCGTGGACGATaGGCAAACATTAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGQDRGR*ANIRQC
Trigger: GCACTGTCTAATGTTTGCCCATCGTCCACGATCTTG...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTTTCCCGATCTTCCTGTaGTCTCGGTTCTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSFPIFL*SRFFAS
Trigger: GGAAGCAAAGAACCGAGATCACAGGAAGATCGGGAA...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCGACAATTCATGGGTTTaGGGGCAAAAGTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSDNSWV*GQKCPF
Trigger: AAAAGGACACTTTTGCCCTCAAACCCATGAATTGTC...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp GACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: DPCEPARTFWNVGKKFVLVSFLS*GHEWTH
Trigger: ATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGAC...GAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACTTTCCATTTCCGGATTaGCCTCCCAATATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHFPFPD*PPNMLR
Trigger: CCTCAACATATTGGGAGGGCAATCCGGAAATGGAAA...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCTTTAGGGCCATAAAATaGTCCATCTCCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSFRAIK*SISWVH
Trigger: ATGAACCCAGGAGATGGAGCATTTTATGGCCCTAAA...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACGGAGGATTTCCTTGCTaGCTTCTAGTCTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHGGFPC*LLVFQK
Trigger: CTTTTGAAAGACTAGAAGTCAGCAAGGAAATCCTCC...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTTTCCATTTCCGGATTaGCCTCCCAATATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIFPFPD*PPNMLR
Trigger: CCTCAACATATTGGGAGGGCAATCCGGAAATGGAAA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTTTAGGGCCATAAAATaGTCCATCTCCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGFRAIK*SISWVH
Trigger: ATGAACCCAGGAGATGGAGCATTTTATGGCCCTAAA...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAAGGCTGCACAGGCGGTaGCGCAGGTCGCAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGRLHRR*RRSQFS
Trigger: CGAGAACTGCGACCTGCGCCACCGCCTGTGCAGCCT...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCAGTGTGTCTTACATGTaGACCTTTGCAAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSSVSYM*TFAKVN
Trigger: ATTGACCTTTGCAAAGGTCCACATGTAAGACACACT...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACATATTTTTCACAAGTTaGCCCCACAGGGATGACCAT +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHIFFTS*PHRDDH
Trigger: ATGGTCATCCCTGTGGGGCCAACTTGTGAAAAATAT...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp AGCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTATATTTTTCACAAGTTaGCCCCACAGGGATGACCAT +
Preference number: 4 (lower is better)
Translates to: SQGVDTRPMRASQNFLECIFFTS*PHRDDH
Trigger: ATGGTCATCCCTGTGGGGCCAACTTGTGAAAAATAT...ACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGCCAGCCAGAACTTTCTaGAATGTGGGTAAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: AKEWTPDPCEPARTFWNVPARTF*NVGKKF
Trigger: AAACTTTTTACCCACATTCCAGAAAGTTCTGGCTGG...CACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACATGCCAGTACACAGCTTaGGCTTCCTCATTATCAAAT +
Preference number: 4 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTCQYTA*ASSLSN
Trigger: ATTTGATAATGAGGAAGCTCAAGCTGTGTACTGGCA...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp TCTTTTCCTTTTCTCCAACCACTGATGAGCCAAGGAGTGGACACCAGACCCATGTATATTCTCCAGGGCTaGCAATTCTGTGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SFPFLQPLMSQGVDTRPMYILQG*QFCAGH
Trigger: GTGTCCAGCACAGAATTGTCAGCCCTGGAGAATATA...CATGGGTCTGGTGTCCACTCCTTGGCTCATCAGTGGTTGGAGAAAAGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCGTGAAGTCCCGTTTGTaGTATTCCTCTCGTATGAAA +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIVKSRL*YSSRMK
Trigger: TTTCATACGAGAGGAATATCACAAACGGGACTTCAC...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp CTAGGAAGTTTTCCGGCCTTGTTGACAGGTTTAATTGAAAGGAGAAGCCAAATGTCTCAGCTGAGGCCATaGGTGGACCCATCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGSFPALLTGLIERRSQMSQLRP*VDPSVA
Trigger: AGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGA...CATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp GGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTTGGCTATTACCGTaGTTTCAGCCAGTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: GRTSKGLLSIECPCLPEILWLLP*FQPVPD
Trigger: GTCAGGAACTGGCTGAAAGCACGGTAATAGCCAAAG...AATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACGTACACGGTGGTAGTTaGAGTGTTAACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHVHGGS*SVNFLI
Trigger: AATGAGAAAGTTAACACTGCAACTACCACCGTGTAC...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACATATTTAGCAGTAGCTaGTGCTTTTGTGGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHIFSSS*CFCGCW
Trigger: CCAACAACCACAAAAGCAGCAGCTACTGCTAAATAT...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp TCTTTTCCTTTTCTCCAACCACTGATGAGCCAAGGAGTGGACACCAGACCCATGAGGAATCTACAGCCATaGTTCTTGCCACACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFPFLQPLMSQGVDTRPMRNLQP*FLPHRR
Trigger: CCTTCTGTGTGGCAAGAAGCATGGCTGTAGATTCCT...CATGGGTCTGGTGTCCACTCCTTGGCTCATCAGTGGTTGGAGAAAAGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR GCA 90 bp CACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCTCACAATCAGGCCCTaGTCCTGTTCATCAGCCACA +
Preference number: 4 (lower is better)
Translates to: HRSKYQGRTSKGLLSIECLTIRP*SCSSAT
Trigger: TGTGGCTGATGAACAGGAGCAGGGCCTGATTGTGAG...ACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCGTTTGTGCATTTAAGTaGCTTTACAGTTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGVCAFK*LYSLVT
Trigger: GGTCACCAAACTGTAAAGGCACTTAAATGCACAAAC...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTAGAGTCCCCTTCCAATaGGCGGTCCAGGTCCCACAG +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFRVPFQ*AVQVPQ
Trigger: CTGTGGGACCTGGACCGCCCATTGGAAGGGGACTCT...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp AGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTAAGTGTGTCTTACATGTaGACCTTTGCAAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: RSGHQTHASQPELSGMWVSVSYM*TFAKVN
Trigger: ATTGACCTTTGCAAAGGTCCACATGTAAGACACACT...TACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
3UTR CAA 72 bp GATCACTGGGTTTGTGCATTTAAGTGCCTTTACAGTTaGGTGACCCTCACAATCAGGCCCTGCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DHWVCAFKCLYS*VTLTIRPCSCS
Trigger: TGAACAGGAGCAGGGCCTGATTGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp AAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCCCCACAGTTCACCATTaGCTTTGGCTATTACCGTGC +
Preference number: 4 (lower is better)
Translates to: KGLLSIECPCLPEILQFIPTVHH*LWLLPC
Trigger: GCACGGTAATAGCCAAAGTCAATGGTGAACTGTGGG...GATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTGCCTCCCCAAGAATGTaGGCACTGGAGTGCCAGTAC +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFASPRM*ALECQY
Trigger: GTACTGGCACTCCAGTGCTCACATTCTTGGGGAGGC...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp GCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGTTCCCGATCTTCCTGTaGTCTCGGTTCTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASSALSVRVFLRFFSLSMFPIFL*SRFFAS
Trigger: GGAAGCAAAGAACCGAGATCACAGGAAGATCGGGAA...CATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGCAGAAGTTACTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTGGCCCCACAGGGATaGCCATCACCTGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: WQKLLKSLHEFCCLLFARLAPQG*PSPDEE
Trigger: CTCCTCGTCAGGTGATGGTCATCCCTGTGGGGCCAA...ACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAGTAACTTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGTGTCCGTGTCTTCCTaGGATTCTTCAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSVSVSS*DSSVYQ
Trigger: TTGATAAACTGAAGAATCTCAGGAAGACACGGACAC...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACAAAACGCTGGAAACACTaGTGCAATTCATTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTKRWKH*CNSFGN
Trigger: ATTCCCAAATGAATTGCATCAGTGTTTCCAGCGTTT...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACTTACATGTGGACCTTTaGAAAGGTCAATTAATGGAC +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHLHVDL*KGQLMD
Trigger: GTCCATTAATTGACCTTTGCAAAGGTCCACATGTAA...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTTTAGCAGTAGCTGCTaGTTTTGTGGTTGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIFSSSC*FCGCWL
Trigger: TAACCAACAACCACAAAAGCAGCAGCTACTGCTAAA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTTTTATGAAAATTGGTTaGTGCTTCACCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSFMKIG*CFTSLS
Trigger: TGACAGCGAGGTGAAGCATCAACCAATTTTCATAAA...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTATGGCAAGTAAGAGCTaGTGGTCTTTCTTCAGTATT +
Preference number: 4 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSMASKS*WSFFSI
Trigger: AATACTGAAGAAAGACCATCAGCTCTTACTTGCCAT...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp AAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTTTCTTTTATGAAAATTaGTTGATGCTTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: KEWTPDPCEPARTFWNVGFFYEN*LMLHLA
Trigger: AGCGAGGTGAAGCATCAACCAATTTTCATAAAAGAA...ACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCAAGATCGTGGACGATaGGCAAACATTAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLQDRGR*ANIRQC
Trigger: GCACTGTCTAATGTTTGCCCATCGTCCACGATCTTG...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp CTAGGTGAGCGGCTTAGTGGTGGTAGAAGCCCACAGCTGAAACGCTGGAAACACCAGTACATAAATCCATaGAATGTCATCCCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LGERLSGGRSPQLKRWKHQYINP*NVIPSK
Trigger: TTTTGATGGGATGACATTCCATGGATTTATGTACTG...GTGTTTCCAGCGTTTCAGCTGTGGGCTTCTACCACCACTAAGCCGCTCACCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp AGAGATCACTGGGTTTGTGCATTTAAGTGCCTTTACAGTTTGGTGACCCTCACACCCAAAATGGCTCGATaGATGATCACAGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RDHWVCAFKCLYSLVTLTPKMAR*MITGLF
Trigger: GAAGAGACCTGTGATCATTCATCGAGCCATTTTGGG...TGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGTCTCCTTTCTCAGCTaGGGCCATGAGTGGACCCAT +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIVSFLS*GHEWTH
Trigger: ATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGAC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp GGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTGTACACGGTGGTAGTTaGAGTGTTAACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: GRTSKGLLSIECPCLPEIVHGGS*SVNFLI
Trigger: AATGAGAAAGTTAACACTGCAACTACCACCGTGTAC...AATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTGCAAACATTAGACAGTaGCCTGGACAATTCATGGGT +
Preference number: 4 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLANIRQ*PGQFMG
Trigger: ACCCATGAATTGTCCAGGGCACTGTCTAATGTTTGC...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp AAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCGCAAACATTAGACAGTaGCCTGGACAATTCATGGGT +
Preference number: 4 (lower is better)
Translates to: KGLLSIECPCLPEILQFIANIRQ*PGQFMG
Trigger: ACCCATGAATTGTCCAGGGCACTGTCTAATGTTTGC...GATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp ACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCTCCATCAAGCTGTTCTaGAGTTGCTTCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TKLHRSKYQGRTSKGLLSSIKLF*SCFSAS
Trigger: TGAGGCTGAGAAGCAACTGCAGAACAGCTTGATGGA...GCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp CCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCATTTCTATGCAGAACATACTGAGCCAGCTGTaGATTTCGTATTTTCTTATT +
Preference number: 4 (lower is better)
Translates to: PHSGQAAESPRQFISMQNILSQL*ISYFLI
Trigger: AATAAGAAAATACGAAATGCACAGCTGGCTCAGTAT...GTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CCA 90 bp AAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCCTGACAATTCTGTGCTaGACACTGCTCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KGLLSIECPCLPEILQFILTILC*TLLCLQ
Trigger: TTGAAGACAGAGCAGTGTCCAGCACAGAATTGTCAG...GATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp AGAGATCACTGGGTTTGTGCATTTAAGTGCCTTTACAGTTTGGTGACCCTCACACAAGGCATTGATTGCTaGAAAATTTCCCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: RDHWVCAFKCLYSLVTLTQGIDC*KISHVP
Trigger: GGGCACGTGGGAAATTTTCCAGCAATCAATGCCTTG...TGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGTGATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAGGAAAATTTCCCACGTaGCCTCTAAACGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGGKFPT*PLNVPR
Trigger: ACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCC...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTGAGTGGACCCATCAGTaGCTCCAAAGTCGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFEWTHQ*LQSRRS
Trigger: ACTTCTACGACTTTGGAGCCACTGATGGGTCCACTC...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
3UTR CAA 72 bp AATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATaGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTA +
Preference number: 4 (lower is better)
Translates to: NIREGLQKASSA*SVRVFLRFFSL
Trigger: TAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp ACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCGACAATTCATGGGTTTaGGGGCAAAAGTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TKLHRSKYQGRTSKGLLSDNSWV*GQKCPF
Trigger: AAAAGGACACTTTTGCCCTCAAACCCATGAATTGTC...GCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp AAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTTTTAGTGTACAACTGTaGTCCAAGTCAACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KLHRSKYQGRTSKGLLSIFSVQL*SKSTSA
Trigger: GGCTGACGTTGACTTGGATCACAGTTGTACACTAAA...AATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CTGAATTCCTTTGTCAGTAATCCAATATTTAGCAGTAGCTGCTGCTTTTGTGGTGTAGAAGCCCACAGCTaGAACGCTGGAAACACTGAT +
Preference number: 4 (lower is better)
Translates to: LNSFVSNPIFSSSCCFCGVEAHS*NAGNTD
Trigger: ATCAGTGTTTCCAGCGTTTCAGCTGTGGGCTTCTAC...ACCACAAAAGCAGCAGCTACTGCTAAATATTGGATTACTGACAAAGGAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGATCCCCTTGCACTGTTTaGCCATCAGCCACTCTTACT +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGSPCTV*PSATLT
Trigger: AGTAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGA...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATATCCCCTTGCACTGTTTaGCCATCAGCCACTCTTACT +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKISPCTV*PSATLT
Trigger: AGTAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGA...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR GCA 90 bp CAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATTTTCCATTTCCGGATTaGCCTCCCAATATGTTGAGG +
Preference number: 4 (lower is better)
Translates to: QPELSGMWVKSLFSLVTHFPFPD*PPNMLR
Trigger: CCTCAACATATTGGGAGGGCAATCCGGAAATGGAAA...ATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCAAGATCGTGGACGATaGGCAAACATTAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFQDRGR*ANIRQC
Trigger: GCACTGTCTAATGTTTGCCCATCGTCCACGATCTTG...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
3UTR CAA 72 bp TCCACATCTCAATCTCTCCTAGGAAGTTTTCCGGCCTaGTTGACAGGTTTAATTGAAAGGAGAAGCCAAATG +
Preference number: 4 (lower is better)
Translates to: STSQSLLGSFPA*LTGLIERRSQM
Trigger: CATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCCTAGGAGAGATTGAGATGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp CAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTTATGAAAATTGGTTaGTGCTTCACCTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QSYTEANIREGLQKASSAFMKIG*CFTSLS
Trigger: TGACAGCGAGGTGAAGCATCAACCAATTTTCATAAA...TGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp AAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTTGCCAGTACACAGCTTaGGCTTCCTCATTATCAAAT +
Preference number: 4 (lower is better)
Translates to: KLHRSKYQGRTSKGLLSICQYTA*ASSLSN
Trigger: ATTTGATAATGAGGAAGCTCAAGCTGTGTACTGGCA...AATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGATATATTCTCCAGGGCTaGCAATTCTGTGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGYILQG*QFCAGH
Trigger: GTGTCCAGCACAGAATTGTCAGCCCTGGAGAATATA...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp ATTTCTATGCAGAACTCCAAAATCAGCAAATCTAATAGGCATTTCCCTCCAAGAGAGAGAGCACCTCCGTaGAGTCCCGTTTGTGATATT +
Preference number: 4 (lower is better)
Translates to: ISMQNSKISKSNRHFPPRERAPP*SPVCDI
Trigger: AATATCACAAACGGGACTTCACGGAGGTGCTCTCTC...TCTTGGAGGGAAATGCCTATTAGATTTGCTGATTTTGGAGTTCTGCATAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGCAGAAGTTACTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTCCCAAAATGGCTCGATaGATGATCACAGGTCTCTTC +
Preference number: 4 (lower is better)
Translates to: WQKLLKSLHEFCCLLFARPKMAR*MITGLF
Trigger: GAAGAGACCTGTGATCATTCATCGAGCCATTTTGGG...ACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAGTAACTTCTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATGTGTCCGTGTCTTCCTaGGATTCTTCAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: QPELSGMWVKSLFSLVTHVSVSS*DSSVYQ
Trigger: TTGATAAACTGAAGAATCTCAGGAAGACACGGACAC...ATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp CTAGGAAGTTTTCCGGCCTTGTTGACAGGTTTAATTGAAAGGAGAAGCCAAATGGTGTCCGTGTCTTCCTaGGATTCTTCAGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: LGSFPALLTGLIERRSQMVSVSS*DSSVYQ
Trigger: TTGATAAACTGAAGAATCTCAGGAAGACACGGACAC...CATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTTTACATGTGGACCTTTaGAAAGGTCAATTAATGGAC +
Preference number: 4 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLLHVDL*KGQLMD
Trigger: GTCCATTAATTGACCTTTGCAAAGGTCCACATGTAA...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp AAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTTTTAGGGCCATAAAATaGTCCATCTCCTGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KLHRSKYQGRTSKGLLSIFRAIK*SISWVH
Trigger: ATGAACCCAGGAGATGGAGCATTTTATGGCCCTAAA...AATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTGACAATTCTGTGCTaGACACTGCTCTGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFLTILC*TLLCLQ
Trigger: TTGAAGACAGAGCAGTGTCCAGCACAGAATTGTCAG...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp CAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATTTCTTTGCTTCCTCTTaGAACTTTTCCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QPELSGMWVKSLFSLVTHFFASS*NFSQSL
Trigger: GAGAGACTGGGAAAAGTTCCAAGAGGAAGCAAAGAA...ATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGACAAGGCATTGATTGCTaGAAAATTTCCCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGQGIDC*KISHVP
Trigger: GGGCACGTGGGAAATTTTCCAGCAATCAATGCCTTG...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp CTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATTTCCCGATCTTCCTGTaGTCTCGGTTCTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LKSLHEFCCLLFARLQHYFPIFL*SRFFAS
Trigger: GGAAGCAAAGAACCGAGATCACAGGAAGATCGGGAA...ATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTGACAATTCATGGGTTTaGGGGCAAAAGTGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFDNSWV*GQKCPF
Trigger: AAAAGGACACTTTTGCCCTCAAACCCATGAATTGTC...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp CAGCCAGAACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATTCCGCCATAGTTTTCTaGAAGAATGGCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: QPELSGMWVKSLFSLVTHSAIVF*KNGYHS
Trigger: AGAATGATAGCCATTCTTTCAGAAAACTATGGCGGA...ATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGTTCTGGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATATTTAGTGTACAACTGTaGTCCAAGTCAACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIFSVQL*SKSTSA
Trigger: GGCTGACGTTGACTTGGATCACAGTTGTACACTAAA...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp TGCAGAACTCCAAAATCAGCAAATCTAATAGGCATTTCCCTCCAAGATCGTGGAGTACACGGTGGTAGTTaGAGTGTTAACTTTCTCATT +
Preference number: 4 (lower is better)
Translates to: CRTPKSANLIGISLQDRGVHGGS*SVNFLI
Trigger: AATGAGAAAGTTAACACTGCAACTACCACCGTGTAC...TCCACGATCTTGGAGGGAAATGCCTATTAGATTTGCTGATTTTGGAGTTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGCAAACATTAGACAGTaGCCTGGACAATTCATGGGT +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIANIRQ*PGQFMG
Trigger: ACCCATGAATTGTCCAGGGCACTGTCTAATGTTTGC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp GCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGATACTGAGCCAGCTGTaGATTTCGTATTTTCTTATT +
Preference number: 4 (lower is better)
Translates to: ASSALSVRVFLRFFSLSMILSQL*ISYFLI
Trigger: AATAAGAAAATACGAAATGCACAGCTGGCTCAGTAT...CATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR GCA 90 bp ACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATATTGTGAGTACAGCCATGCTTCTTaGCACACAGAAGGAAGAAAC +
Preference number: 4 (lower is better)
Translates to: TFWNVGKKFVLSSDPYCEYSHAS*HTEGRN
Trigger: GTTTCTTCCTTCTGTGTGGCAAGAAGCATGGCTGTA...CTCACAATATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGGAGGATTTCCTTGCTaGCTTCTAGTCTTTCAAAAG +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIGGFPC*LLVFQK
Trigger: CTTTTGAAAGACTAGAAGTCAGCAAGGAAATCCTCC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGTGAAGTCCCGTTTGTaGTATTCCTCTCGTATGAAA +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIVKSRL*YSSRMK
Trigger: TTTCATACGAGAGGAATATCACAAACGGGACTTCAC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR TCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTTCCGCCATAGTTTTCTaGAAGAATGGCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFSAIVF*KNGYHS
Trigger: AGAATGATAGCCATTCTTTCAGAAAACTATGGCGGA...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp GATTGCAAAAACTGCAAACACCCCTTTATTTCTTCTTCAATCTGCTCCACTGTGTCCGCCATAGTTTTCTaGAAGAATGGCTATCATTCT +
Preference number: 4 (lower is better)
Translates to: DCKNCKHPFISSSICSTVSAIVF*KNGYHS
Trigger: AGAATGATAGCCATTCTTTCAGAAAACTATGGCGGA...CACAGTGGAGCAGATTGAAGAAGAAATAAAGGGGTGTTTGCAGTTTTTGCAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTATTTTAATTCAGTTCTaGGCACGTAGAGCATTCCTC +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFILIQF*ARRAFL
Trigger: GAGGAATGCTCTACGTGCTCAGAACTGAATTAAAAT...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR GCA 90 bp GGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTTACATGTGGACCTTTaGAAAGGTCAATTAATGGAC +
Preference number: 4 (lower is better)
Translates to: GSKQSYTEANIREGLQKALHVDL*KGQLMD
Trigger: GTCCATTAATTGACCTTTGCAAAGGTCCACATGTAA...GGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CCA 90 bp CTGAATTCCTTTGTCAGTAATCCAATATTTAGCAGTAGCTGCTGCTTTTGTGGTTTCTTTGCTTCCTCTTaGAACTTTTCCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LNSFVSNPIFSSSCCFCGFFASS*NFSQSL
Trigger: GAGAGACTGGGAAAAGTTCCAAGAGGAAGCAAAGAA...ACCACAAAAGCAGCAGCTACTGCTAAATATTGGATTACTGACAAAGGAATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp ATTTCTATGCAGAACTCCAAAATCAGCAAATCTAATAGGCATTTCCCTCCAAGATTCTTTGCTTCCTCTTaGAACTTTTCCCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ISMQNSKISKSNRHFPPRFFASS*NFSQSL
Trigger: GAGAGACTGGGAAAAGTTCCAAGAGGAAGCAAAGAA...TCTTGGAGGGAAATGCCTATTAGATTTGCTGATTTTGGAGTTCTGCATAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGGAGAAGCCAAATGTTaGGTAAACAGATTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIGEAKC*VNRLQK
Trigger: TTTTTGCAATCTGTTTACTCAACATTTGGCTTCTCC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGCAGAAGTTACTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTGGAGAAGCCAAATGTTaGGTAAACAGATTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: WQKLLKSLHEFCCLLFARGEAKC*VNRLQK
Trigger: TTTTTGCAATCTGTTTACTCAACATTTGGCTTCTCC...ACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAGTAACTTCTGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR TCA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATACAGATTCCACAAAACTaGATTCCTTTGTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIQIPQN*IPLSVI
Trigger: GATTACTGACAAAGGAATTCAGTTTTGTGGAATCTG...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CCA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTTTCTTTTATGAAAATTaGTTGATGCTTCACCTCGCT +
Preference number: 4 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFFFYEN*LMLHLA
Trigger: AGCGAGGTGAAGCATCAACCAATTTTCATAAAAGAA...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CCA 90 bp ATTTCTATGCAGAACTCCAAAATCAGCAAATCTAATAGGCATTTCCCTCCAAGAAGTGTGTCTTACATGTaGACCTTTGCAAAGGTCAAT +
Preference number: 4 (lower is better)
Translates to: ISMQNSKISKSNRHFPPRSVSYM*TFAKVN
Trigger: ATTGACCTTTGCAAAGGTCCACATGTAAGACACACT...TCTTGGAGGGAAATGCCTATTAGATTTGCTGATTTTGGAGTTCTGCATAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR GCA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAATACTGAGCCAGCTGTaGATTTCGTATTTTCTTATT +
Preference number: 4 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGILSQL*ISYFLI
Trigger: AATAAGAAAATACGAAATGCACAGCTGGCTCAGTAT...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR TCA 90 bp TTTAAGGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAGGAGAAGCCAAATGTTaGGTAAACAGATTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: FKGQNKVTQKQISGKDFKGEAKC*VNRLQK
Trigger: TTTTTGCAATCTGTTTACTCAACATTTGGCTTCTCC...TTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCCTTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS GCA 90 bp TCGGCCGCCATCGCGGCCTCCCTCAGGCACCGACGCCGAGCGGGGTaGCCGCGACTGCGGCGAGGGCGACGCGGACACTCAGCGCACGGC +
Preference number: 5 (lower is better)
Translates to: SAAIAASLRHRRRAG*PRLRRGRRGHSAHG
Trigger: GCCGTGCGCTGAGTGTCCGCGTCGCCCTCGCCGCAGTCGCGGGCACCCCGCTCGGCGTCGGTGCCTGAGGGAGGCCGCGATGGCGGCCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS CCA 90 bp GTGCGCCGGCCTCCTGCGCCGCCTCTAGCTCCGCGCTCTCCAGCGTaGCCTGGCGGCTCCGCTCCTCGGCGAGGCACAGCCGCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VRRPPAPPLAPRSPA*PGGSAPRRGTAAGC
Trigger: GCAGCCTGCGGCTGTGCCTCGCCGAGGAGCGGAGCCGCCAGGCCACGCTGGAGAGCGCGGAGCTAGAGGCGGCGCAGGAGGCCGGCGCAC
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CCA 90 bp CGGCTCCGCTCCTCGGCGAGGCACAGCCGCAGGCTGCACAGGCGGTaGCGCAGGTCGCAGTTCTCGGCCCGGAGCTGCGCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: RLRSSARHSRRLHRR*RRSQFSARSCATSR
Trigger: GCGGGAGGTGGCGCAGCTCCGGGCCGAGAACTGCGACCTGCGCCACCGCCTGTGCAGCCTGCGGCTGTGCCTCGCCGAGGAGCGGAGCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS GCA 90 bp CTCAGGCGCTCGACCTCCGACCACAGCCAGCGGATGTCCTCCTCCTaGCGCTCCAGGCGCGACGCCACGGCCTCCGCCGCCAGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LRRSTSDHSQRMSSS*RSRRDATASAARAS
Trigger: CGAGGCCCTGGCGGCGGAGGCCGTGGCGTCGCGCCTGGAGCGGCAGGAGGAGGACATCCGCTGGCTGTGGTCGGAGGTCGAGCGCCTGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS TCA 90 bp GGCGCAGGTCGCAGTTCTCGGCCCGGAGCTGCGCCACCTCCCGCGTaGGGCACGGCCCCTCCGCCTGGCAGCTGTAGGGCGCGTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GAGRSSRPGAAPPPA*GTAPPPGSCRARSA
Trigger: AGCTGAACGCGCCCTACAGCTGCCAGGCGGAGGGGCCGTGCCTCACGCGGGAGGTGGCGCAGCTCCGGGCCGAGAACTGCGACCTGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS-3UTR CAA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTTTCCAGACTTCCCCTaGCACTGTTTGCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGFPDFP*HCLPIS
Trigger: GCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAAA...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAAGGCCTCCTCAGCATaGAGTGTCCGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIKASSA*SVRVFL
Trigger: CAGGAAGACACGGACACTCAATGCTGAGGAGGCCTT...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp GTCCTGCTGGAAGCGCCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCTCAGCCACATCTGTCTaGCATTCGTATGAAATCTGT +
Preference number: 5 (lower is better)
Translates to: VLLEAPHSGQAAESPRQFSATSV*HSYEIC
Trigger: ACAGATTTCATACGAATGCAAGACAGATGTGGCTGA...GAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGGCGCTTCCAGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CAA 90 bp CAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTTACTGTTGTACATATaGGGAGAGAGCACCTCCGTG +
Preference number: 5 (lower is better)
Translates to: QGVDTRPMRASQNFLECGLLLYI*GESTSV
Trigger: CACGGAGGTGCTCTCTCCCAATATGTACAACAGTAA...CCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS TCA 90 bp CTTCCACCTTTGCTTGCCTACTCGCCATTTGCCACACAACACCTATaGTGGCTGGCTGGGCTGATTTGTTTCTCCTCCACGTCCTCCTTA +
Preference number: 5 (lower is better)
Translates to: LPPLLAYSPFATQHL*WLAGLICFSSTSSL
Trigger: TAAGGAGGACGTGGAGGAGAAACAAATCAGCCCAGCCAGCCATCATAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS GCA 90 bp GGTCTGCAATCCACTGCTTCCACCTTTGCTTGCCTACTCGCCATTTaGCACACAACACCTATGATGGCTGGCTGGGCTGATTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GLQSTASTFACLLAI*HTTPMMAGWADLFL
Trigger: GAGAAACAAATCAGCCCAGCCAGCCATCATAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS-3UTR CAA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACACCACTTGGTAAGGCGTaGTTTTCCAGACTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTPLGKA*FSRLPL
Trigger: AAGGGGAAGTCTGGAAAACAACGCCTTACCAAGTGG...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCAATTTCAGCAGCCACTaGGTAAGGCGTTGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSNFSSH*VRRCFP
Trigger: TGGAAAACAACGCCTTACCAAGTGGCTGCTGAAATT...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp AAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTTCCCACAGTTCACCATaGACTTTGGCTATTACCGTG +
Preference number: 5 (lower is better)
Translates to: KEWTPDPCEPARTFWNVGSHSSP*TLAITV
Trigger: CACGGTAATAGCCAAAGTCAATGGTGAACTGTGGGA...ACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS GCA 90 bp CAGGTCTCTTCTTATCATCCCCATCCTTACTGGTCTGCAATCCACTaGTTCCACCTTTGCTTGCCTACTCGCCATTTGCCACACAACACC +
Preference number: 5 (lower is better)
Translates to: QVSSYHPHPYWSAIH*FHLCLPTRHLPHNT
Trigger: GGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACCAGTAAGGATGGGGATGATAAGAAGAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS-3UTR CAA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCAGTTCACCATTGACTTaGGCTATTACCGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSSSPLT*AITVLS
Trigger: TGAAAGCACGGTAATAGCCAAAGTCAATGGTGAACT...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCTTACTGTTGTACATATaGGGAGAGAGCACCTCCGTG +
Preference number: 5 (lower is better)
Translates to: SATRSSSPFSAEAMSGPILLLYI*GESTSV
Trigger: CACGGAGGTGCTCTCTCCCAATATGTACAACAGTAA...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTCAAGCTGTTCTGCAGTaGCTTCTCAGCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: SCMSATRSSSPFSAEAMSQAVLQ*LLSLIP
Trigger: TGGAATGAGGCTGAGAAGCAACTGCAGAACAGCTTG...ACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGACATGCACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp AGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTAAGTTCACCATTGACTTaGGCTATTACCGTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: RSGHQTHASQPELSGMWVSSPLT*AITVLS
Trigger: TGAAAGCACGGTAATAGCCAAAGTCAATGGTGAACT...TACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACAGTGCCAGTACACAGCTaGAGCTTCCTCATTATCAAA +
Preference number: 5 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTVPVHS*SFLIIK
Trigger: TTTGATAATGAGGAAGCTCAAGCTGTGTACTGGCAC...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCCTTACATGTGGACCTTaGCAAAGGTCAATTAATGGA +
Preference number: 5 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSLTCGP*QRSING
Trigger: TCCATTAATTGACCTTTGCAAAGGTCCACATGTAAG...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCTCCGAAAAAGAAAAGTTCTaGTTCCTTCCCGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: RSSSPFSAEAMSGPISGSEKEKF*FLPDLP
Trigger: AGGAAGATCGGGAAGGAACAAGAACTTTTCTTTTTC...GGAGCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACATCCCAGAGTTTACTGTaGTACATATTGGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTSQSLL*YILGES
Trigger: GCTCTCTCCCAATATGTACAACAGTAAACTCTGGGA...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000558533.5
CDS-3UTR CAA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCGGAAGTTTTCCGGCCTaGTTGACAGGTTTAATTGAA +
Preference number: 5 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGGSFPA*LTGLIE
Trigger: TTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCC...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp GCCAAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGATGTGGGTAAAAAGTTaGTTCTCTCTAGTGACCCAT +
Preference number: 5 (lower is better)
Translates to: AKEWTPDPCEPARTFWNVMWVKS*FSLVTH
Trigger: ATGGGTCACTAGAGAGAACAAACTTTTTACCCACAT...CACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp CAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCAGTCCTTGTCTTGGCTTaGACTAGGAGGAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QSYTEANIREGLQKASSAVLVLA*TRRRLC
Trigger: GCACAGCCTCCTCCTAGTCAAAGCCAAGACAAGGAC...TGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTTTTCATGTCCTTGTCTaGGCTTTGACTAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: GRTSKGLLSIECPCLPEIFHVLV*ALTRRR
Trigger: CCTCCTCCTAGTCAAAGCCAAGACAAGGACATGAAA...AATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp CACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTTTCCCCTTGCACTGTTaGCCCATCAGCCACTCTTAC +
Preference number: 5 (lower is better)
Translates to: HRSKYQGRTSKGLLSIECFPLHC*PISHSY
Trigger: GTAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGAA...ACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GCCTCCTCAGCATTGAGTGTCCGTGTCTTCCTGAGATTCTTCAGTTTATCAATGTTTCCAGACTTCCCCTaGCACTGTTTGCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: ASSALSVRVFLRFFSLSMFPDFP*HCLPIS
Trigger: GCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAAA...CATTGATAAACTGAAGAATCTCAGGAAGACACGGACACTCAATGCTGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GGCATTGATTGCTGGAAAATTTCCCACGTGCCCTCTAAACGTCCCCCGTGGACAAGTTTTCCGGCCTTGTaGACAGGTTTAATTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GIDCWKISHVPSKRPPWTSFPAL*TGLIER
Trigger: CCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACT...TGTCCACGGGGGACGTTTAGAGGGCACGTGGGAAATTTTCCAGCAATCAATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000558533.5
CDS-3UTR CAA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCGGAAGTTTTCCGGCCTaGTTGACAGGTTTAATTGAA +
Preference number: 5 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIGSFPA*LTGLIE
Trigger: TTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCC...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CCTCACTCTGGTCAAGCCGCTGAGAGTCCCCGACAGTTCATTTCTATGCAGAACGGAAGTTTTCCGGCCTaGTTGACAGGTTTAATTGAA +
Preference number: 5 (lower is better)
Translates to: PHSGQAAESPRQFISMQNGSFPA*LTGLIE
Trigger: TTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCC...GTTCTGCATAGAAATGAACTGTCGGGGACTCTCAGCGGCTTGACCAGAGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CAA 90 bp AAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCCGTGTCTTCCACTTGGTAAGGCGTaGTTTTCCAGACTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: KYQGRTSKGLLSIECPCLPLGKA*FSRLPL
Trigger: AAGGGGAAGTCTGGAAAACAACGCCTTACCAAGTGG...AAGACACGGACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCCTTACATGTGGACCTTaGCAAAGGTCAATTAATGGA +
Preference number: 5 (lower is better)
Translates to: SATRSSSPFSAEAMSGPILTCGP*QRSING
Trigger: TCCATTAATTGACCTTTGCAAAGGTCCACATGTAAG...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp AAGGAGTGGACACCAGACCCATGCGAGCCAGCCAGAACTTTCTGGAATGTGGGTCAGTCTCTCATCATCTaGTTATCAGGAAAGGATATT +
Preference number: 5 (lower is better)
Translates to: KEWTPDPCEPARTFWNVGQSLII*LSGKDI
Trigger: AATATCCTTTCCTGATAACAAGATGATGAGAGACTG...ACCCACATTCCAGAAAGTTCTGGCTGGCTCGCATGGGTCTGGTGTCCACTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp TCAGCTACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCGAAAAAGAAAAGTTCTaGTTCCTTCCCGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: SATRSSSPFSAEAMSGPIEKEKF*FLPDLP
Trigger: AGGAAGATCGGGAAGGAACAAGAACTTTTCTTTTTC...GATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGTAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp ACACGTTCATCGTCTCCTTTCTCAGCTGAGGCCATGAGTGGACCCATCAGTGGCAGGAGAAGCCAAATGTaGAGTAAACAGATTGCAAAA +
Preference number: 5 (lower is better)
Translates to: TRSSSPFSAEAMSGPISGRRSQM*SKQIAK
Trigger: TTTTGCAATCTGTTTACTCAACATTTGGCTTCTCCT...GCCACTGATGGGTCCACTCATGGCCTCAGCTGAGAAAGGAGACGATGAACGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTAAGGCCTCCTCAGCATaGAGTGTCCGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFKASSA*SVRVFL
Trigger: CAGGAAGACACGGACACTCAATGCTGAGGAGGCCTT...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAGTCCTTGTCTTGGCTTaGACTAGGAGGAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIVLVLA*TRRRLC
Trigger: GCACAGCCTCCTCCTAGTCAAAGCCAAGACAAGGAC...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTTTCCCCTTGCACTGTTaGCCCATCAGCCACTCTTAC +
Preference number: 5 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFFPLHC*PISHSY
Trigger: GTAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGAA...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp CAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCAGTTTCCATTTCCGGATaGCCCTCCCAATATGTTGAG +
Preference number: 5 (lower is better)
Translates to: QSYTEANIREGLQKASSAVSISG*PSQYVE
Trigger: CTCAACATATTGGGAGGGCAATCCGGAAATGGAAAC...TGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp GGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCCAAGCTGTTCTGCAGTaGCTTCTCAGCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: GSKQSYTEANIREGLQKAQAVLQ*LLSLIP
Trigger: TGGAATGAGGCTGAGAAGCAACTGCAGAACAGCTTG...GGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTCCAGGAGGATTTCCTaGCTGACTTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: LHRSKYQGRTSKGLLSIESRRIS*LTSSLS
Trigger: TGAAAGACTAGAAGTCAGCAAGGAAATCCTCCTGGA...CTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp CAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATCCCAGAGTTTACTGTaGTACATATTGGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QSYTEANIREGLQKASSASQSLL*YILGES
Trigger: GCTCTCTCCCAATATGTACAACAGTAAACTCTGGGA...TGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TCTTTTCCTTTTCTCCAACCACTGATGAGCCAAGGAGTGGACACCAGACCCATGAGGAGAAGCCAAATGTaGAGTAAACAGATTGCAAAA +
Preference number: 5 (lower is better)
Translates to: SFPFLQPLMSQGVDTRPMRRSQM*SKQIAK
Trigger: TTTTGCAATCTGTTTACTCAACATTTGGCTTCTCCT...CATGGGTCTGGTGTCCACTCCTTGGCTCATCAGTGGTTGGAGAAAAGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTCAAGCTGTTCTGCAGTaGCTTCTCAGCCTCATTCCA +
Preference number: 5 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFQAVLQ*LLSLIP
Trigger: TGGAATGAGGCTGAGAAGCAACTGCAGAACAGCTTG...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGTGTCTGAATTGTAGCACATaGATGGTATCTGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: HRSKYQGRTSKGLLSIECLNCST*MVSANS
Trigger: GCTATTGGCAGATACCATCAATGTGCTACAATTCAG...ACACTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCTATCTTAAGGCCTCCTCAGCATaGAGTGTCCGTGTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSMNFVVSCSHVYSIIYLKASSA*SVRVFL
Trigger: CAGGAAGACACGGACACTCAATGCTGAGGAGGCCTT...AAGATAGATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS TCA 90 bp ATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATATTGTGAGATaGTGCAGGAATCTACAGCCATGCTTCTTGCCACACAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: MWVKSLFSLVTHIVR*CRNLQPCFLPHRRK
Trigger: CTTCCTTCTGTGTGGCAAGAAGCATGGCTGTAGATTCCTGCATCATCTCACAATATGGGTCACTAGAGAGAACAAACTTTTTACCCACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTTCCCACAGTTCACCATaGACTTTGGCTATTACCGTG +
Preference number: 5 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFSHSSP*TLAITV
Trigger: CACGGTAATAGCCAAAGTCAATGGTGAACTGTGGGA...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp GGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTGTTTCCATTTCCGGATaGCCCTCCCAATATGTTGAG +
Preference number: 5 (lower is better)
Translates to: GQNKVTQKQISGKDFKRPVSISG*PSQYVE
Trigger: CTCAACATATTGGGAGGGCAATCCGGAAATGGAAAC...AGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CTGAATTCCTTTGTCAGTAATCCAATATTTAGCAGTAGCTGCTGCTTTTGTGGTTTTCATGTCCTTGTCTaGGCTTTGACTAGGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LNSFVSNPIFSSSCCFCGFHVLV*ALTRRR
Trigger: CCTCCTCCTAGTCAAAGCCAAGACAAGGACATGAAA...ACCACAAAAGCAGCAGCTACTGCTAAATATTGGATTACTGACAAAGGAATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAGTTTCCATTTCCGGATaGCCCTCCCAATATGTTGAG +
Preference number: 5 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGVSISG*PSQYVE
Trigger: CTCAACATATTGGGAGGGCAATCCGGAAATGGAAAC...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATATTACTGTTGTACATATaGGGAGAGAGCACCTCCGTG +
Preference number: 5 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKILLLYI*GESTSV
Trigger: CACGGAGGTGCTCTCTCCCAATATGTACAACAGTAA...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCATTGAGGAATTTTGTTGTCTCTaGTTCGCACGTTTACAGCAT +
Preference number: 5 (lower is better)
Translates to: LHRSKYQGRTSKGLLSIEEFCCL*FARLQH
Trigger: ATGCTGTAAACGTGCGAACAAGAGACAACAAAATTC...CTCAATGCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp ACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGGCCTCCTCAGCAAGTTTCTCAAGGCATaGATTGCTGGAAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: TKLHRSKYQGRTSKGLLSKFLKA*IAGKFP
Trigger: GGGAAATTTTCCAGCAATCAATGCCTTGAGAAACTT...GCTGAGGAGGCCTTTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS TCA 90 bp AGGTTGCTTTTCTTTTATGATGGCTTTACATATATTCTCCAGGGCTaGCAATTCTGTGCTGGACACTGCTCTGTCTTCAATGAACATGTC +
Preference number: 5 (lower is better)
Translates to: RLLFFYDGFTYILQG*QFCAGHCSVFNEHV
Trigger: GACATGTTCATTGAAGACAGAGCAGTGTCCAGCACAGAATTGTCAGCCCTGGAGAATATATGTAAAGCCATCATAAAAGAAAAGCAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS-3UTR CAA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGATCCAGGAGGATTTCCTaGCTGACTTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGSRRIS*LTSSLS
Trigger: TGAAAGACTAGAAGTCAGCAAGGAAATCCTCCTGGA...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp CTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCTATCTTGTGCCAGTACACAGCTaGAGCTTCCTCATTATCAAA +
Preference number: 5 (lower is better)
Translates to: LSMNFVVSCSHVYSIIYLVPVHS*SFLIIK
Trigger: TTTGATAATGAGGAAGCTCAAGCTGTGTACTGGCAC...AAGATAGATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp CTAGGAAGTTTTCCGGCCTTGTTGACAGGTTTAATTGAAAGGAGAAGCCAAATGCAGTCTCTCATCATCTaGTTATCAGGAAAGGATATT +
Preference number: 5 (lower is better)
Translates to: LGSFPALLTGLIERRSQMQSLII*LSGKDI
Trigger: AATATCCTTTCCTGATAACAAGATGATGAGAGACTG...CATTTGGCTTCTCCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACTTCCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CAA 90 bp GACATGAGTAAATTAAACTTCGTGCATGTCAGCTACACGTTCATCGTCTCCTTTGAAAAAGAAAAGTTCTaGTTCCTTCCCGATCTTCCT +
Preference number: 5 (lower is better)
Translates to: DMSKLNFVHVSYTFIVSFEKEKF*FLPDLP
Trigger: AGGAAGATCGGGAAGGAACAAGAACTTTTCTTTTTC...AAAGGAGACGATGAACGTGTAGCTGACATGCACGAAGTTTAATTTACTCATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCTATCTTTCCCAGAGTTTACTGTaGTACATATTGGGAGAGAGC +
Preference number: 5 (lower is better)
Translates to: LSMNFVVSCSHVYSIIYLSQSLL*YILGES
Trigger: GCTCTCTCCCAATATGTACAACAGTAAACTCTGGGA...AAGATAGATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp ACTTTCTGGAATGTGGGTAAAAAGTTTGTTCTCTCTAGTGACCCATATTGTGAGAGTTTTCCGGCCTTGTaGACAGGTTTAATTGAAAGG +
Preference number: 5 (lower is better)
Translates to: TFWNVGKKFVLSSDPYCESFPAL*TGLIER
Trigger: CCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACT...CTCACAATATGGGTCACTAGAGAGAACAAACTTTTTACCCACATTCCAGAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539112.5
CDS-3UTR CAA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGACTGAATTGTAGCACATaGATGGTATCTGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGLNCST*MVSANS
Trigger: GCTATTGGCAGATACCATCAATGTGCTACAATTCAG...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp GATTGCAAAAACTGCAAACACCCCTTTATTTCTTCTTCAATCTGCTCCACTGTGGAATTTTGTTGTCTCTaGTTCGCACGTTTACAGCAT +
Preference number: 5 (lower is better)
Translates to: DCKNCKHPFISSSICSTVEFCCL*FARLQH
Trigger: ATGCTGTAAACGTGCGAACAAGAGACAACAAAATTC...CACAGTGGAGCAGATTGAAGAAGAAATAAAGGGGTGTTTGCAGTTTTTGCAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS-3UTR CAA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATATTTTATGAAAATTGGTaGATGCTTCACCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIFYENW*MLHLAV
Trigger: GACAGCGAGGTGAAGCATCAACCAATTTTCATAAAA...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335968.8
ENST00000539112.5
CDS-3UTR CAA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAGAATTTTGTTGTCTCTaGTTCGCACGTTTACAGCAT +
Preference number: 5 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGEFCCL*FARLQH
Trigger: ATGCTGTAAACGTGCGAACAAGAGACAACAAAATTC...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp CCTGATATATATTGTTTTGTTTGCCAACTGTTTCACTGTTCACATCCCTCAGGAAAGTTTCTCAAGGCATaGATTGCTGGAAAATTTCCC +
Preference number: 5 (lower is better)
Translates to: PDIYCFVCQLFHCSHPSGKFLKA*IAGKFP
Trigger: GGGAAATTTTCCAGCAATCAATGCCTTGAGAAACTT...TCCTGAGGGATGTGAACAGTGAAACAGTTGGCAAACAAAACAATATATATCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS-3UTR CAA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATACAGTCTCTCATCATCTaGTTATCAGGAAAGGATATT +
Preference number: 5 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIQSLII*LSGKDI
Trigger: AATATCCTTTCCTGATAACAAGATGATGAGAGACTG...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TGGACCCATCAGTGGCTCCAAAGTCGTAGAAGTACTAACATGTTAAGAAAAATAAGGAGAAGCCAAATGTaGAGTAAACAGATTGCAAAA +
Preference number: 5 (lower is better)
Translates to: WTHQWLQSRRSTNMLRKIRRSQM*SKQIAK
Trigger: TTTTGCAATCTGTTTACTCAACATTTGGCTTCTCCT...TATTTTTCTTAACATGTTAGTACTTCTACGACTTTGGAGCCACTGATGGGTCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TTTAAGGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAAAGTTTTCCGGCCTTGTaGACAGGTTTAATTGAAAGG +
Preference number: 5 (lower is better)
Translates to: FKGQNKVTQKQISGKDFKSFPAL*TGLIER
Trigger: CCTTTCAATTAAACCTGTCAACAAGGCCGGAAAACT...TTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp CTAAAATCTCTCCATGAATTTTGTTGTCTCTTGTTCGCACGTTTACAGCATTATCTGAATTGTAGCACATaGATGGTATCTGCCAATAGC +
Preference number: 5 (lower is better)
Translates to: LKSLHEFCCLLFARLQHYLNCST*MVSANS
Trigger: GCTATTGGCAGATACCATCAATGTGCTACAATTCAG...ATAATGCTGTAAACGTGCGAACAAGAGACAACAAAATTCATGGAGAGATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS-3UTR CAA 90 bp TTTAAGGGTCAAAACAAAGTTACACAGAAGCAAATATCAGGGAAGGACTTCAAACTTACATGTGGACCTTaGCAAAGGTCAATTAATGGA +
Preference number: 5 (lower is better)
Translates to: FKGQNKVTQKQISGKDFKLTCGP*QRSING
Trigger: TCCATTAATTGACCTTTGCAAAGGTCCACATGTAAG...TTTGAAGTCCTTCCCTGATATTTGCTTCTGTGTAACTTTGTTTTGACCCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539112.5
ENST00000558533.5
CDS GCA 72 bp CCCTCAGGCACCGACGCCGAGCGGGGTGCCCGCGACTaGGGCGAGGGCGACGCGGACACTCAGCGCACGGCA +
Preference number: 6 (lower is better)
Translates to: PSGTDAERGARD*GEGDADTQRTA
Trigger: TGCCGTGCGCTGAGTGTCCGCGTCGCCCTCGCCGCAGTCGCGGGCACCCCGCTCGGCGTCGGTGCCTGAGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS GCA 72 bp AGGCGGTGGCGCAGGTCGCAGTTCTCGGCCCGGAGCTaGGCCACCTCCCGCGTGAGGCACGGCCCCTCCGCC +
Preference number: 6 (lower is better)
Translates to: RRWRRSQFSARS*ATSRVRHGPSA
Trigger: GGCGGAGGGGCCGTGCCTCACGCGGGAGGTGGCGCAGCTCCGGGCCGAGAACTGCGACCTGCGCCACCGCCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS GCA 72 bp ATCGCGGCCTCCCTCAGGCACCGACGCCGAGCGGGGTaGCCGCGACTGCGGCGAGGGCGACGCGGACACTCA +
Preference number: 6 (lower is better)
Translates to: IAASLRHRRRAG*PRLRRGRRGHS
Trigger: TGAGTGTCCGCGTCGCCCTCGCCGCAGTCGCGGGCACCCCGCTCGGCGTCGGTGCCTGAGGGAGGCCGCGAT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335968.8
CDS GCA 72 bp GGCGGCTCCGCTCCTCGGCGAGGCACAGCCGCAGGCTaGACAGGCGGTGGCGCAGGTCGCAGTTCTCGGCCC +
Preference number: 6 (lower is better)
Translates to: GGSAPRRGTAAG*TGGGAGRSSRP
Trigger: GGGCCGAGAACTGCGACCTGCGCCACCGCCTGTGCAGCCTGCGGCTGTGCCTCGCCGAGGAGCGGAGCCGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CCA 72 bp CCTCCTGCGCCGCCTCTAGCTCCGCGCTCTCCAGCGTaGCCTGGCGGCTCCGCTCCTCGGCGAGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: PPAPPLAPRSPA*PGGSAPRRGTA
Trigger: GGCTGTGCCTCGCCGAGGAGCGGAGCCGCCAGGCCACGCTGGAGAGCGCGGAGCTAGAGGCGGCGCAGGAGG
76% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS GCA 72 bp TCGACCTCCGACCACAGCCAGCGGATGTCCTCCTCCTaGCGCTCCAGGCGCGACGCCACGGCCTCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: STSDHSQRMSSS*RSRRDATASAA
Trigger: GGCGGCGGAGGCCGTGGCGTCGCGCCTGGAGCGGCAGGAGGAGGACATCCGCTGGCTGTGGTCGGAGGTCGA
75% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CCA 72 bp TCCTCGGCGAGGCACAGCCGCAGGCTGCACAGGCGGTaGCGCAGGTCGCAGTTCTCGGCCCGGAGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: SSARHSRRLHRR*RRSQFSARSCA
Trigger: GGCGCAGCTCCGGGCCGAGAACTGCGACCTGCGCCACCGCCTGTGCAGCCTGCGGCTGTGCCTCGCCGAGGA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS TCA 72 bp TTGCTTGCCTACTCGCCATTTGCCACACAACACCTATaGTGGCTGGCTGGGCTGATTTGTTTCTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: LLAYSPFATQHL*WLAGLICFSST
Trigger: CGTGGAGGAGAAACAAATCAGCCCAGCCAGCCATCATAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS TCA 72 bp GAAGTGCATATTTTTCACAAGTTGGCCCCACAGGGATaGCCATCACCTGACGAGGAGATAGCCAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: EVHIFHKLAPQG*PSPDEEIARKA
Trigger: GGCCTTTCTGGCTATCTCCTCGTCAGGTGATGGTCATCCCTGTGGGGCCAACTTGTGAAAAATATGCACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS GCA 72 bp TGCCTTTACAGTTTGGTGACCCTCACAATCAGGCCCTaGTCCTGTTCATCAGCCACATCTGTCTTGCATTCG +
Preference number: 6 (lower is better)
Translates to: CLYSLVTLTIRP*SCSSATSVLHS
Trigger: CGAATGCAAGACAGATGTGGCTGATGAACAGGAGCAGGGCCTGATTGTGAGGGTCACCAAACTGTAAAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS CAA 72 bp CCATCCTTACTGGTCTGCAATCCACTGCTTCCACCTTaGCTTGCCTACTCGCCATTTGCCACACAACACCTA +
Preference number: 6 (lower is better)
Translates to: PSLLVCNPLLPP*LAYSPFATQHL
Trigger: TAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACCAGTAAGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS GCA 72 bp CTTACTGGTCTGCAATCCACTGCTTCCACCTTTGCTTaGCTACTCGCCATTTGCCACACAACACCTATGATG +
Preference number: 6 (lower is better)
Translates to: LTGLQSTASTFA*LLAICHTTPMM
Trigger: CATCATAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACCAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS GCA 72 bp TCTTATCATCCCCATCCTTACTGGTCTGCAATCCACTaGTTCCACCTTTGCTTGCCTACTCGCCATTTGCCA +
Preference number: 6 (lower is better)
Translates to: SYHPHPYWSAIH*FHLCLPTRHLP
Trigger: TGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACCAGTAAGGATGGGGATGATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS CAA 72 bp AGCCACTTGGTAAGGCGTTGTTTTCCAGACTTCCCCTaGCACTGTTTGCCCATCAGCCACTCTTACTGTGAT +
Preference number: 6 (lower is better)
Translates to: SHLVRRCFPDFP*HCLPISHSYCD
Trigger: ATCACAGTAAGAGTGGCTGATGGGCAAACAGTGCAAGGGGAAGTCTGGAAAACAACGCCTTACCAAGTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CAA 72 bp CCTTACTGGTCTGCAATCCACTGCTTCCACCTTTGCTaGCCTACTCGCCATTTGCCACACAACACCTATGAT +
Preference number: 6 (lower is better)
Translates to: PYWSAIHCFHLC*PTRHLPHNTYD
Trigger: ATCATAGGTGTTGTGTGGCAAATGGCGAGTAGGCAAGCAAAGGTGGAAGCAGTGGATTGCAGACCAGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS TCA 72 bp ACTGGGTTTGTGCATTTAAGTGCCTTTACAGTTTGGTaGCCCTCACAATCAGGCCCTGCTCCTGTTCATCAG +
Preference number: 6 (lower is better)
Translates to: TGFVHLSAFTVW*PSQSGPAPVHQ
Trigger: CTGATGAACAGGAGCAGGGCCTGATTGTGAGGGTCACCAAACTGTAAAGGCACTTAAATGCACAAACCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS CCA 72 bp TTCACTGGATACCTGAAGTGCATATTTTTCACAAGTTaGCCCCACAGGGATGACCATCACCTGACGAGGAGA +
Preference number: 6 (lower is better)
Translates to: FTGYLKCIFFTS*PHRDDHHLTRR
Trigger: TCTCCTCGTCAGGTGATGGTCATCCCTGTGGGGCCAACTTGTGAAAAATATGCACTTCAGGTATCCAGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CAA 90 bp ACCCTCACAATCAGGCCCTGCTCCTGTTCATCAGCCACATCTGTCTaGCATTCGTATGAAATCTGTAAGCGTATTATAAATGAAGGCTCC +
Preference number: 6 (lower is better)
Translates to: TLTIRPCSCSSATSV*HSYEICKRIINEGS
Trigger: GGAGCCTTCATTTATAATACGCTTACAGATTTCATACGAATGCAAGACAGATGTGGCTGATGAACAGGAGCAGGGCCTGATTGTGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558533.5
CDS CAA 90 bp TCTGATGGCCCTAAGCAATTTTGTTGTAGGACTGATCCTGAAGGTTaGACTTTCTCTCTAATAGTTCTGACCCTTGCTCCTCCAAAACGG +
Preference number: 6 (lower is better)
Translates to: SDGPKQFCCRTDPEG*TFSLIVLTLAPPKR
Trigger: CCGTTTTGGAGGAGCAAGGGTCAGAACTATTAGAGAGAAAGTCAAACCTTCAGGATCAGTCCTACAACAAAATTGCTTAGGGCCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS CAA 72 bp CCTAAGCAATTTTGTTGTAGGACTGATCCTGAAGGTTaGACTTTCTCTCTAATAGTTCTGACCCTTGCTCCT +
Preference number: 6 (lower is better)
Translates to: PKQFCCRTDPEG*TFSLIVLTLAP
Trigger: AGGAGCAAGGGTCAGAACTATTAGAGAGAAAGTCAAACCTTCAGGATCAGTCCTACAACAAAATTGCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559492.1
CDS TCA 72 bp TTCTTTTATGATGGCTTTACATATATTCTCCAGGGCTaGCAATTCTGTGCTGGACACTGCTCTGTCTTCAAT +
Preference number: 6 (lower is better)
Translates to: FFYDGFTYILQG*QFCAGHCSVFN
Trigger: ATTGAAGACAGAGCAGTGTCCAGCACAGAATTGTCAGCCCTGGAGAATATATGTAAAGCCATCATAAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335968.8
ENST00000539112.5
ENST00000615656.1
CDS CAA 90 bp TGTGGCCTCTTATATAATGTAGTTTACAACATAACTACCCAAAGTTaGGCTGTCTGGTTTTTAAATACTCACAGCTTGAGCTTCCTCATT +
Preference number: 6 (lower is better)
Translates to: CGLLYNVVYNITTQS*AVWFLNTHSLSFLI
Trigger: AATGAGGAAGCTCAAGCTGTGAGTATTTAAAAACCAGACAGCCAAACTTTGGGTAGTTATGTTGTAAACTACATTATATAAGAGGCCACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560150.1