RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TARS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143374

Ensembl transcript IDs: ENST00000369051.7, ENST00000369053.3, ENST00000369054.6, ENST00000369064.8, ENST00000438568.6, ENST00000460794.1, ENST00000462578.1, ENST00000463555.1, ENST00000466989.1, ENST00000467982.6, ENST00000479372.1, ENST00000480070.5, ENST00000606933.5

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGG +
Preference number: 1 (lower is better)
Translates to: CLHTVLKFWGLHIVS*VGVSHVREADGTRR
Trigger: CCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
3UTR GCA 90 bp CTTCCCAATGCGCCGGTGGTCCCGCAATTCTGCTTCCTCCCTCCATaGTTCCCAGACCCTCAGCAATTCTGTTGTGGGGAAGGAAATCCC +
Preference number: 1 (lower is better)
Translates to: LPNAPVVPQFCFLPP*FPDPQQFCCGEGNP
Trigger: GGGATTTCCTTCCCCACAACAGAATTGCTGAGGGTCTGGGAAGCATGGAGGGAGGAAGCAGAATTGCGGGACCACCGGCGCATTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR GCA 90 bp TGTGCAGGGCAGTTCATAGGCTTGAGGGCGAGTGTATCTGTGATATaGCTGGTAGAATCGTCACTCTGGGAGCTGGGAGGCCTGTCAGAG +
Preference number: 1 (lower is better)
Translates to: CAGQFIGLRASVSVI*LVESSLWELGGLSE
Trigger: CTCTGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTACCAGGCATATCACAGATACACTCGCCCTCAAGCCTATGAACTGCCCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369051.7
3UTR-3UTR TCA 90 bp GCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: ASRRGSSRQDLGRWANIRPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...CCTGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR TCA 90 bp CAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGGGAAGGAAATCCCTaGCACTCTCTGCAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: QLVAGAVPARIWAGGRTSGEGNP*HSLQCL
Trigger: GAGACACTGCAGAGAGTGTCAGGGATTTCCTTCCCC...TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR-3UTR CCA 90 bp CCCGGTGTAGAGCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 2 (lower is better)
Translates to: PGVEPQSQLVAGAVPARILHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...GATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGCTCTACACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CCA 90 bp GAGGACTGGACGCTCCAGGGCACCCGCCTGCCCCTTATACTGGAGGTCAAATCTCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 2 (lower is better)
Translates to: EDWTLQGTRLPLILEVKSPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...AGATTTGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR-3UTR CCA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 2 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR TCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 2 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
3UTR-3UTR TCA 90 bp AGGCAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTCCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 2 (lower is better)
Translates to: RQVPLPKATIISSPNVHCPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...ACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR GCA 90 bp GAGGACTGGACGCTCCAGGGCACCCGCCTGCCCCTTATACTGGAGGTCAAATCTAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 2 (lower is better)
Translates to: EDWTLQGTRLPLILEVKSRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...AGATTTGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR GCA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACCCTGTTCCTTCCCAATaGGCCGGTGGTCCCGCAATT +
Preference number: 2 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHPVPSQ*AGGPAI
Trigger: AATTGCGGGACCACCGGCGCATTGGGAAGGAACAGG...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR-3UTR GCA 90 bp CAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QVPLPKATIISSPNVHCSVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...AGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CCA 90 bp AAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 2 (lower is better)
Translates to: KSHSPRRRLSRVRMFTVLVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...GAGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR TCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR GCA 90 bp CAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 2 (lower is better)
Translates to: QVPLPKATIISSPNVHCSSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...AGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR GCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 2 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR GCA 90 bp CATGCTTCCCAGACCCTCAGCAATTCTGTTGTGGGGAAGGAAATCCCTGACACTCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 2 (lower is better)
Translates to: HASQTLSNSVVGKEIPDTPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...AGTGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGAGGGTCTGGGAAGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR-3UTR GCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCGTGGTCCCGCAATTCTaGTTCCTCCCTCCATGCTTC +
Preference number: 2 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFVVPQF*FLPPCF
Trigger: GAAGCATGGAGGGAGGAAGCAGAATTGCGGGACCAC...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
3UTR-3UTR TCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
3UTR-3UTR TCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
3UTR-3UTR TCA 90 bp AAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCGTGGTCTTGATCTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 2 (lower is better)
Translates to: KSHSPRRRLSRVRMFTVLVVLIS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGATCAAGACCAC...GAGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
3UTR-3UTR TCA 90 bp CTGACCAGTCCTGCAGCCCGCAGGCTCTGCTGTGCCTCTTTGGCGTATTCCTCTATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 2 (lower is better)
Translates to: LTSPAARRLCCASLAYSSISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...AGAGGAATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGTCGGAGAAACCACGATaGGCATACTCAGCCGATAGC +
Preference number: 2 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQSEKPR*AYSADS
Trigger: GCTATCGGCTGAGTATGCCCATCGTGGTTTCTCCGA...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369051.7
3UTR-3UTR TCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 2 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
3UTR-3UTR GCA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 2 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CAA 90 bp GCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 3 (lower is better)
Translates to: ASRRGSSRQDLGRWANIRSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...CCTGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR CCA 72 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGC +
Preference number: 3 (lower is better)
Translates to: TVLKFWGLHIVS*VGVSHVREADG
Trigger: GCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
3UTR CCA 72 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCC +
Preference number: 3 (lower is better)
Translates to: RADMCLHTVLKF*GLHIVSWVGVS
Trigger: GGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
3UTR TCA 72 bp TGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTTGCCTCATCTATGTAC +
Preference number: 3 (lower is better)
Translates to: CQLGWGLPCEGG*WHSQVFASSMY
Trigger: GTACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
3UTR GCA 72 bp CAGTTCATAGGCTTGAGGGCGAGTGTATCTGTGATATaGCTGGTAGAATCGTCACTCTGGGAGCTGGGAGGC +
Preference number: 3 (lower is better)
Translates to: QFIGLRASVSVI*LVESSLWELGG
Trigger: GCCTCCCAGCTCCCAGAGTGACGATTCTACCAGGCATATCACAGATACACTCGCCCTCAAGCCTATGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369051.7
3UTR-3UTR CAA 90 bp AAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 3 (lower is better)
Translates to: KSHSPRRRLSRVRMFTVLGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...GAGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CAA 90 bp CAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: QVPLPKATIISSPNVHCSLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...AGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
3UTR-3UTR CAA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTCACACCCATATACTGTaGCTGTTGGACCTGTCACTT +
Preference number: 3 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVHTHIL*LLDLSL
Trigger: AAGTGACAGGTCCAACAGCAACAGTATATGGGTGTG...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp CAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCACCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: QLVAGAVPARIWAGGRTSPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp GCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: ASRRGSSRQDLGRWANIRLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...CCTGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CCA 90 bp GCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: APKSASRRGSSRQDLGRWPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...CCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp GCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGATGCTCCCAGTGCCCTaGCTGTTCCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: APKSASRRGSSRQDLGRWMLPVP*LFPELR
Trigger: ACGAAGCTCTGGGAACAGTCAGGGCACTGGGAGCAT...CCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CCA 90 bp GCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGCGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: ASRRGSSRQDLGRWANIRRPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...CCTGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp GCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGGGGGGAAGGAAATCCCTaGCACTCTCTGCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASRRGSSRQDLGRWANIRGEGNP*HSLQCL
Trigger: GAGACACTGCAGAGAGTGTCAGGGATTTCCTTCCCC...CCTGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp CTGACCAGTCCTGCAGCCCGCAGGCTCTGCTGTGCCTCTTTGGCGTATTCCTCTGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LTSPAARRLCCASLAYSSALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...AGAGGAATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTTGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: APKSASRRGSSRQDLGRWRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...CCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGCCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGCACTCCCCACAGGGATaGCCACCACCTGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCEHSPQG*PPPGTG
Trigger: CCCCGTTCCAGGTGGTGGTCATCCCTGTGGGGAGTG...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTCGATAGCAGCTTCAGTCCTCCAATCTGTCCAGTATGCCGAAGGTGGGGGCCCTGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FDSSFSPPICPVCRRWGPWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...GGGCCCCCACCTTCGGCATACTGGACAGATTGGAGGACTGAAGCTGCTATCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR GCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFSSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVREVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GAGGACTGGACGCTCCAGGGCACCCGCCTGCCCCTTATACTGGAGGTCAAATCTGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: EDWTLQGTRLPLILEVKSGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...AGATTTGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp CAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLVAGAVPARIWAGGRTSVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCCCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCCGAGCACTGCTCGGTaGATGAGGACTGGACGCTCC +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVPSTAR*MRTGRS
Trigger: GGAGCGTCCAGTCCTCATTCACCGAGCAGTGCTCGG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTCAGAGCCTGGGGGCTaGACGGCAAACATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFSEPGG*TANMSS
Trigger: GGAAGACATGTTTGCCGTGCAGCCCCCAGGCTCTGA...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACTGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCCGGTGTAGAGCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PGVEPQSQLVAGAVPARILAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...GATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGCTCTACACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp ATATGCCTGGTAGAATCGTCACTCTGGGAGCTGGGAGGCCTGTCAGAGCCTGGGGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: ICLVESSLWELGGLSEPGAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...CCCAGGCTCTGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTACCAGGCATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR GCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLSSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTGACCAGTCCTGCAGCCCGCAGGCTCTGCTGTGCCTCTTTGGCGTATTCCTCTATCCCTGACACTCTCTaGAGTGTCTCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: LTSPAARRLCCASLAYSSIPDTL*SVSGAP
Trigger: AGGGGCCCCAGAGACACTGCAGAGAGTGTCAGGGAT...AGAGGAATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR CCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGCTCTGCCAACCAGCGTaGAGGGGTCGACACAACTGC +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVRELCQPA*RGRHNC
Trigger: GCAGTTGTGTCGACCCCTCCACGCTGGTTGGCAGAG...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGCTCTGCCAACCAGCGTaGAGGGGTCGACACAACTGC +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRLCQPA*RGRHNC
Trigger: GCAGTTGTGTCGACCCCTCCACGCTGGTTGGCAGAG...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCAGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVREGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCAGGATCTGGGCCGGTaGGCGAACATCAGGCCTGAT +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPQDLGR*ANIRPD
Trigger: ATCAGGCCTGATGTTCGCCCACCGGCCCAGATCCTG...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFRHRHL*YRAMFL
Trigger: AAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCT...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGATGCTCCCAGTGCCCTaGCTGTTCCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLMLPVP*LFPELR
Trigger: ACGAAGCTCTGGGAACAGTCAGGGCACTGGGAGCAT...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTCACTCCCCACAGGGATaGCCACCACCTGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCHSPQG*PPPGTG
Trigger: CCCCGTTCCAGGTGGTGGTCATCCCTGTGGGGAGTG...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACACTCCCCACAGGGATaGCCACCACCTGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPHSPQG*PPPGTG
Trigger: CCCCGTTCCAGGTGGTGGTCATCCCTGTGGGGAGTG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGTGGCCGGGTGGACAGTaGCAGGCGGAAGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQWPGGQ*QAEGEA
Trigger: GGCTTCTCCTTCCGCCTGGCACTGTCCACCCGGCCA...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GAGGACTGGACGCTCCAGGGCACCCGCCTGCCCCTTATACTGGAGGTCAAATCTCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: EDWTLQGTRLPLILEVKSHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...AGATTTGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCAGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCESSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCAGCCATATTCTGTACTTaGACCACTGCAGTATCTGCC +
Preference number: 4 (lower is better)
Translates to: QLVAGAVPARIWAGGRTSAIFCT*TTAVSA
Trigger: GGCAGATACTGCAGTGGTCCAAGTACAGAATATGGC...TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CCA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGCGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVRERPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGCGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRRPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCCGGTGTAGAGCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: PGVEPQSQLVAGAVPARISAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...GATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGCTCTACACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR TCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATATGCTCCCAGTGCCCTaGCTGTTCCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHMLPVP*LFPELR
Trigger: ACGAAGCTCTGGGAACAGTCAGGGCACTGGGAGCAT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTGCACTGCTCGGTGAATaGGGACTGGACGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCALLGE*GLDAPG
Trigger: CCCTGGAGCGTCCAGTCCTCATTCACCGAGCAGTGC...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CATGCTTCCCAGACCCTCAGCAATTCTGTTGTGGGGAAGGAAATCCCTGACACTCACTCCCCACAGGGATaGCCACCACCTGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: HASQTLSNSVVGKEIPDTHSPQG*PPPGTG
Trigger: CCCCGTTCCAGGTGGTGGTCATCCCTGTGGGGAGTG...AGTGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGAGGGTCTGGGAAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVREPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGTGGTCTTGATCTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVVVLIS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGATCAAGACCAC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
CDS-3UTR TCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCAAAACAGGCAGCTCTaGGCCCCGGATTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVQNRQL*APDCPL
Trigger: GAGAGGACAATCCGGGGCTCAGAGCTGCCTGTTTTG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGAACAACTGGCGAAGCTaGTCCCGTGAAGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRNNWRS*SREASS
Trigger: GCTAGAGGCTTCACGGGATCAGCTTCGCCAGTTGTT...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGAAGGCCAAGCCGCTCTaGCAACCAGCGTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQKAKPL*QPAWRG
Trigger: ACCCCTCCACGCTGGTTGGCAGAGCGGCTTGGCCTT...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATCAGAGCCTGGGGGCTaGACGGCAAACATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPSEPGG*TANMSS
Trigger: GGAAGACATGTTTGCCGTGCAGCCCCCAGGCTCTGA...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCAGAGCCTGGGGGCTaGACGGCAAACATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVSEPGG*TANMSS
Trigger: GGAAGACATGTTTGCCGTGCAGCCCCCAGGCTCTGA...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHSSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSSSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCCTGTTCCTTCCCAATaGGCCGGTGGTCCCGCAATT +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHPVPSQ*AGGPAI
Trigger: AATTGCGGGACCACCGGCGCATTGGGAAGGAACAGG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000467982.6
CDS-3UTR CCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCAAGCCTGTAAACCTTaGAGCCGGAGACACCGCCAC +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLQACKP*SRRHRH
Trigger: GTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTG...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCAAGCCTGTAAACCTTaGAGCCGGAGACACCGCCAC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHQACKP*SRRHRH
Trigger: GTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCCTCTGCCAACCAGCGTaGAGGGGTCGACACAACTGC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSLCQPA*RGRHNC
Trigger: GCAGTTGTGTCGACCCCTCCACGCTGGTTGGCAGAG...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGGTAGAATCGTCACTCTaGGAGCTGGGAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLVESSL*ELGGLS
Trigger: TGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTAC...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGTAGAATCGTCACTCTaGGAGCTGGGAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRVESSL*ELGGLS
Trigger: TGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTAC...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTGTTCCCGCCAGGATCTaGGCCGGTGGGCGAACATCA +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCVPARI*AGGRTS
Trigger: TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAAC...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRLHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLLHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCAAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPRHRHL*YRAMFL
Trigger: AAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCT...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCERHRHL*YRAMFL
Trigger: AAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCT...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATATGCTCCCAGTGCCCTaGCTGTTCCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHMLPVP*LFPELR
Trigger: ACGAAGCTCTGGGAACAGTCAGGGCACTGGGAGCAT...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCATGCTCCCAGTGCCCTaGCTGTTCCCAGAGCTTCGT +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSMLPVP*LFPELR
Trigger: ACGAAGCTCTGGGAACAGTCAGGGCACTGGGAGCAT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGCACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATGGGGAAGGAAATCCCTaGCACTCTCTGCAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHGEGNP*HSLQCL
Trigger: GAGACACTGCAGAGAGTGTCAGGGATTTCCTTCCCC...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000467982.6
CDS-3UTR GCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCTGCCGTGTGTAGCCTaGAAGCCTGTAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPLPCVA*KPVNLG
Trigger: TCCAAGGTTTACAGGCTTGCAGGCTACACACGGCAG...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTCAGAGCCTGGGGGCTaGACGGCAAACATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSSEPGG*TANMSS
Trigger: GGAAGACATGTTTGCCGTGCAGCCCCCAGGCTCTGA...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTGAACATCAGGCAGTGTaGAGGGCAGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFEHQAV*RAVHRL
Trigger: AAGCCTATGAACTGCCCTGCACACTGCCTGATGTTC...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCGCAGCCCGCAGGCTCTaGTGTGCCTCTTTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLAARRL*CASLAY
Trigger: ATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGC...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGTCACTGACCAGTCCTaGAGCCCGCAGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLVTDQS*SPQALL
Trigger: CAGCAGAGCCTGCGGGCTGCAGGACTGGTCAGTGAC...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATACATGGGTGCTGGAGTaGCAGAACACTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHTWVLE*QNTAFP
Trigger: GGGGAAAGCAGTGTTCTGGCACTCCAGCACCCATGT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR GCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCGTGGTCCCGCAATTCTaGTTCCTCCCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLVVPQF*FLPPCF
Trigger: GAAGCATGGAGGGAGGAAGCAGAATTGCGGGACCAC...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000467982.6
CDS-3UTR CCA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTCTCTGCCAACCAGCGTaGAGGGGTCGACACAACTGC +
Preference number: 4 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVLCQPA*RGRHNC
Trigger: GCAGTTGTGTCGACCCCTCCACGCTGGTTGGCAGAG...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLLHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VSWVGVSHVREADGTRRFTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCTTCCCAATGCGCCGGTaGTCCCGCAATTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFFPMRR*SRNSAS
Trigger: GGAAGCAGAATTGCGGGACCACCGGCGCATTGGGAA...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFRHRHL*YRAMFL
Trigger: AAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCT...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR TCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCCACTCCCCACAGGGATaGCCACCACCTGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFHSPQG*PPPGTG
Trigger: CCCCGTTCCAGGTGGTGGTCATCCCTGTGGGGAGTG...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGTTGGGGTCTCCCATGTaGGGGAGGCTGATGGCACTC +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGLGSPM*GRLMAL
Trigger: GAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAA...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCAAAACAGGCAGCTCTaGGCCCCGGATTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLQNRQL*APDCPL
Trigger: GAGAGGACAATCCGGGGCTCAGAGCTGCCTGTTTTG...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp CCCCCAGACCACCAGAGGCTTCGGCCCGGTGTAGAGCCCCAAAGTCAGCTAGTCTTCTCCTCAATCAAGTaGAGCTTAAAGGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: PPDHQRLRPGVEPQSQLVFSSIK*SLKGLS
Trigger: GGATAACCCCTTTAAGCTTCACTTGATTGAGGAGAA...GACTAGCTGACTTTGGGGCTCTACACCGGGCCGAAGCCTCTGGTGGTCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCCAAAACAGGCAGCTCTaGGCCCCGGATTGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFQNRQL*APDCLL
Trigger: AAGCAGACAATCCGGGGCTCAGAGCTGCCTGTTTTG...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR GCA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCACTGCCGTGTGTAGCCTaGAAGCCTGTAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPLPCVA*KPVNLG
Trigger: TCCAAGGTTTACAGGCTTGCAGGCTACACACGGCAG...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCCGGTGTAGAGCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: PGVEPQSQLVAGAVPARIVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...GATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGCTCTACACCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp GAGCTTCGTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATGGGCCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELRRKQCGSFHLGETTMGPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...GCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR GCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGCCAATCTGTCCAGTATaGCGAAGGTGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGPICPV*RRWGPW
Trigger: CCAGGGCCCCCACCTTCGGCATACTGGACAGATTGG...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGTCCAGGGCACCCGCCTaGCCCTTATACTGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLSRAPA*PLYWRS
Trigger: TGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGA...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCELAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVLAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGLAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACCTGTTCCTTCCCAATaGGCCGGTGGTCCCGCAATT +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPPVPSQ*AGGPAI
Trigger: AATTGCGGGACCACCGGCGCATTGGGAAGGAACAGG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369064.8
CDS-3UTR CCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACAAGCCTGTAAACCTTaGAGCCGGAGACACCGCCAC +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPQACKP*SRRHRH
Trigger: GTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCAAGCCTGTAAACCTTaGAGCCGGAGACACCGCCAC +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQQACKP*SRRHRH
Trigger: GTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTG...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGCTCTGCCAACCAGCGTaGAGGGGTCGACACAACTGC +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGLCQPA*RGRHNC
Trigger: GCAGTTGTGTCGACCCCTCCACGCTGGTTGGCAGAG...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGTCGGAGAAACCACGATaGGCATACTCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGSEKPR*AYSADS
Trigger: GCTATCGGCTGAGTATGCCCATCGTGGTTTCTCCGA...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369051.7
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPRPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTSAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLSAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVRESAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCATTCCCAATGCGCCGGTaGTCCCGCAATTCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPFPMRR*SRNSAS
Trigger: GGAAGCAGAATTGCGGGACCACCGGCGCATTGGGAA...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369064.8
CDS-3UTR TCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CCTGACTGTTCCCAGAGCTTCGTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGGTGGTCTTGATCTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: PDCSQSFVENSVGVFTSEVVLIS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGATCAAGACCAC...CTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTCTGGGAACAGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR TCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCAAACAACTGGCGAAGCTaGTCCCGTGAAGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPNNWRS*SREASS
Trigger: GCTAGAGGCTTCACGGGATCAGCTTCGCCAGTTGTT...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCCTGCCGTGTGTAGCCTaGAAGCCTGTAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSLPCVA*KPVNLG
Trigger: TCCAAGGTTTACAGGCTTGCAGGCTACACACGGCAG...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGGGGGTTGTGTTCCATaGCACAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRGGCVP*HSINFL
Trigger: CAGAAAATTGATGCTGTGGCATGGAACACAACCCCC...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGTCAGAGCCTGGGGGCTaGACGGCAAACATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLSEPGG*TANMSS
Trigger: GGAAGACATGTTTGCCGTGCAGCCCCCAGGCTCTGA...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTCACAGAACCGAGCACTaGTCGGTGAATGAGGACTGG +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCHRTEH*SVNEDW
Trigger: CCAGTCCTCATTCACCGAGCAGTGCTCGGTTCTGTG...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GGATCTCTGCTTCCAGCTGATCTGTTGTACAGAAGATGTGAGCGTCATCCTGCTAGCTCCACCAGTCGCTaGACAGCCTCAGGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: GSLLPADLLYRRCERHPASSTSR*TASGKS
Trigger: GGACTTGCCTGAGGCTGTGCAGCGACTGGTGGAGCT...AGCAGGATGACGCTCACATCTTCTGTACAACAGATCAGCTGGAAGCAGAGATCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCAGGAGAGCAGACATGTaGCTCCACACAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVRRADM*LHTVLK
Trigger: CTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCT...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCACATGGGTGCTGGAGTaGCAGAACACTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVTWVLE*QNTAFP
Trigger: GGGGAAAGCAGTGTTCTGGCACTCCAGCACCCATGT...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGATCCCTGACACTCTCTaGAGTGTCTCTGGGGCCCCT +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGIPDTL*SVSGAP
Trigger: AGGGGCCCCAGAGACACTGCAGAGAGTGTCAGGGAT...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369064.8
CDS-3UTR GCA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGTGGTCCCGCAATTCTaGTTCCTCCCTCCATGCTTC +
Preference number: 4 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVVVPQF*FLPPCF
Trigger: GAAGCATGGAGGGAGGAAGCAGAATTGCGGGACCAC...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000467982.6
CDS-3UTR CCA 90 bp CAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCAAGCCTGTAAACCTTaGAGCCGGAGACACCGCCAC +
Preference number: 4 (lower is better)
Translates to: QVPLPKATIISSPNVHCSQACKP*SRRHRH
Trigger: GTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTG...AGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCTCGGAGAAACCACGATaGGCATACTCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFSEKPR*AYSADS
Trigger: GCTATCGGCTGAGTATGCCCATCGTGGTTTCTCCGA...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCGTAGAATCGTCACTCTaGGAGCTGGGAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLVESSL*ELGGLS
Trigger: TGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTAC...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGTAGAATCGTCACTCTaGGAGCTGGGAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVVESSL*ELGGLS
Trigger: TGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTAC...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGCGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLRPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGTGTCCCACACTGATGTaGCCGGCCCAGGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLCPTLM*PAQGIV
Trigger: CACGATGCCCTGGGCCGGCCACATCAGTGTGGGACA...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TTCGATAGCAGCTTCAGTCCTCCAATCTGTCCAGTATGCCGAAGGTGGGGGCCCTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FDSSFSPPICPVCRRWGPSAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...GGGCCCCCACCTTCGGCATACTGGACAGATTGGAGGACTGAAGCTGCTATCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR CCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GAGGACTGGACGCTCCAGGGCACCCGCCTGCCCCTTATACTGGAGGTCAAATCTTCAGCAATTCTGTTGTaGGGAAGGAAATCCCTGACA +
Preference number: 4 (lower is better)
Translates to: EDWTLQGTRLPLILEVKSSAILL*GRKSLT
Trigger: TGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGA...AGATTTGACCTCCAGTATAAGGGGCAGGCGGGTGCCCTGGAGCGTCCAGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR CCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGTCGGAGAAACCACGATaGGCATACTCAGCCCTGATA +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCESEKPR*AYSALI
Trigger: TATCAGGGCTGAGTATGCCCATCGTGGTTTCTCCGA...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369064.8
CDS-3UTR CCA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGGCCATATTCTGTACTTaGACCTCTGCAGTATCTGCC +
Preference number: 4 (lower is better)
Translates to: SWVGVSHVREADGTRRFLAIFCT*TSAVSA
Trigger: GGCAGATACTGCAGAGGTCCAAGTACAGAATATGGC...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000438568.6
CDS-3UTR TCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGCACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCTGGCCAACCACAAACTGAAAATTGTAGTGGGCAAGCTGGGCCCGGCGGATTCGGTTCTCCATTCACTTaGGCAGCCACTGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SGQPQTENCSGQAGPGGFGSPFT*AATAVS
Trigger: AGATACTGCAGTGGCTGCTCAAGTGAATGGAGAACC...GAATCCGCCGGGCCCAGCTTGCCCACTACAATTTTCAGTTTGTGGTTGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR GCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACTGCCGTGTGTAGCCTaGAAGCCTGTAAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPLPCVA*KPVNLG
Trigger: TCCAAGGTTTACAGGCTTGCAGGCTACACACGGCAG...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGGGGGTTGTGTTCCATaGCACAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVGGCVP*HSINFL
Trigger: CAGAAAATTGATGCTGTGGCATGGAACACAACCCCC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAAAGGTCAACCAATGTaGCACACCTCTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVKGQPM*HTSPFP
Trigger: TGGGAAAGGAGAGGTGTGGCACATTGGTTGACCTTT...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000438568.6
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCGAACATCAGGCAGTGTaGAGGGCAGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSEHQAV*RAVHRL
Trigger: AAGCCTATGAACTGCCCTGCACACTGCCTGATGTTC...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: WVGVSHVREADGTRRFLPTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTAGGGCATCGTGGAGGTaGACGTCAATCTTAGGTCCA +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCRASWR*TSILGP
Trigger: TGGACCTAAGATTGACGTGCACCTCCACGATGCCCT...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVLAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACAGGAGAGCAGACATGTaGCTCCACACAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHRRADM*LHTVLK
Trigger: CTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCT...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGACATGGGTGCTGGAGTaGCAGAACACTGCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGTWVLE*QNTAFP
Trigger: GGGGAAAGCAGTGTTCTGGCACTCCAGCACCCATGT...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CCA 90 bp CTGACCAGTCCTGCAGCCCGCAGGCTCTGCTGTGCCTCTTTGGCGTATTCCTCTACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: LTSPAARRLCCASLAYSSTASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...AGAGGAATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGCCAGTATGCCGAAGGTaGGGGCCCTGGCAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLPVCRR*GPWQRS
Trigger: TGACCTTTGCCAGGGCCCCCACCTTCGGCATACTGG...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTTCTCGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: KSHSPRRRLSRVRMFTVLACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...GAGAACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCGGGATGACCACCACCTaGAACGGGGACAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFGMTTT*NGDSHS
Trigger: ACTGTGGCTGTCCCCGTTCCAGGTGGTGGTCATCCC...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGCAGCTGTAAGTTCCTaGCAAATCCGCTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWAAVSS*QIRSKT
Trigger: TGTTTTGGAGCGGATTTGCCAGGAACTTACAGCTGC...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGCAGCTGTAAGTTCCTaGCAAATCCGCTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCEAAVSS*QIRSKT
Trigger: TGTTTTGGAGCGGATTTGCCAGGAACTTACAGCTGC...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCAGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGTGGTCTTGATCTCCTaGCCTCATGATCCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWVVLIS*PHDPSA
Trigger: GGCGGACGGATCATGAGGTCAGGAGATCAAGACCAC...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369051.7
ENST00000369064.8
ENST00000438568.6
CDS-3UTR TCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGCAAAACAGGCAGCTCTaGGCCCCGGATTGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLQNRQL*APDCPL
Trigger: GAGAGGACAATCCGGGGCTCAGAGCTGCCTGTTTTG...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGGGCATACTCAGCCTTaGACAACTGGCGAAGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGGHTQP*TTGEAD
Trigger: ATCAGCTTCGCCAGTTGTTCAAGGCTGAGTATGCCC...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000369054.6
CDS-3UTR GCA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: KFWGLHIVSWVGVSHVREVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCGAACATCAGGCAGTGTaGAGGGCAGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLEHQAV*RAVHRL
Trigger: AAGCCTATGAACTGCCCTGCACACTGCCTGATGTTC...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTGAACATCAGGCAGTGTaGAGGGCAGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSHVREADGTRRFLPHLCEHQAV*RAVHRL
Trigger: AAGCCTATGAACTGCCCTGCACACTGCCTGATGTTC...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CCTGACTGTTCCCAGAGCTTCGTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGTTGGCGTATTCCTCTTaGTCACTCCCCACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PDCSQSFVENSVGVFTSELAYSS*SLPTGM
Trigger: CATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAA...CTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTCTGGGAACAGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR GCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCAGGAGAGCAGACATGTaGCTCCACACAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLRRADM*LHTVLK
Trigger: CTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCT...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGTCGGAGAAACCACGATaGGCATACTCAGCCGATAGC +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGSEKPR*AYSADS
Trigger: GCTATCGGCTGAGTATGCCCATCGTGGTTTCTCCGA...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369051.7
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGTAGAATCGTCACTCTaGGAGCTGGGAGGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSVESSL*ELGGLS
Trigger: TGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTAC...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGCGGCCCAGGGCATCGTaGAGGTGCACGTCAATCTTA +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWRPRAS*RCTSIL
Trigger: TAAGATTGACGTGCACCTCCACGATGCCCTGGGCCG...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GGATCTCTGCTTCCAGCTGATCTGTTGTACAGAAGATGTGAGCGTCATCCTGCTCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: GSLLPADLLYRRCERHPALHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...AGCAGGATGACGCTCACATCTTCTGTACAACAGATCAGCTGGAAGCAGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACGCCATATTCTGTACTTaGACCTCTGCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: FRRADMCLHTVLKFWGLHAIFCT*TSAENS
Trigger: GCTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGC...GTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CCA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGCAGCTGTAAGTTCCTaGCAAATCCGCTCCAAAACA +
Preference number: 4 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHAAVSS*QIRSKT
Trigger: TGTTTTGGAGCGGATTTGCCAGGAACTTACAGCTGC...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTATATACTGTTGCTGTTaGACCTGTCACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHIVSWVGVSHVREADGTIYCCC*TCHFLL
Trigger: GAGGAGAAAGTGACAGGTCCAACAGCAACAGTATAT...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTT +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWRHRHL*YRAMFL
Trigger: AAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCT...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGCACCATCTCCAGAGTTaGGGTCCCAGGGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLHHLQS*GPRVLQ
Trigger: TTGGAGAACCCTGGGACCTCAACTCTGGAGATGGTG...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp GTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATGGGCATACTCACCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: VENSVGVFTSEKPRWAYSPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...TGAGTATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTTTTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR TCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGCCATGTGAGGGAGGCTaGTGGCACTCGCAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWPCEGG*WHSQVF
Trigger: AAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGG...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGAACAACTGGCGAAGCTaGTCCCGTGAAGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWNNWRS*SREASS
Trigger: GCTAGAGGCTTCACGGGATCAGCTTCGCCAGTTGTT...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATTTCTCCTCAATCAAGTaGAGCTTAAAGGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHFSSIK*SLKGLS
Trigger: GGATAACCCCTTTAAGCTTCACTTGATTGAGGAGAA...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGTTCTCCTCAATCAAGTaGAGCTTAAAGGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGFSSIK*SLKGLS
Trigger: GGATAACCCCTTTAAGCTTCACTTGATTGAGGAGAA...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGGTTGTGTTCCATaGCACAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVGGCVP*HSINFL
Trigger: CAGAAAATTGATGCTGTGGCATGGAACACAACCCCC...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGAACATCAGGCAGTGTaGAGGGCAGTTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGEHQAV*RAVHRL
Trigger: AAGCCTATGAACTGCCCTGCACACTGCCTGATGTTC...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GAGCTTCGTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATGGGCAGGAGAGCAGACATGTaGCTCCACACAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: ELRRKQCGSFHLGETTMGRRADM*LHTVLK
Trigger: CTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCT...GCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR GCA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCAAAGGTCAACCAATGTaGCACACCCATATACTGTTG +
Preference number: 4 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVKGQPM*HTHILL
Trigger: CAACAGTATATGGGTGTGGCACATTGGTTGACCTTT...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAAAGGTCAACCAATGTaGCACACCCATATACTGTTG +
Preference number: 4 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVKGQPM*HTHILL
Trigger: CAACAGTATATGGGTGTGGCACATTGGTTGACCTTT...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: VGVSHVREADGTRRFLPHTASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCETASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLTASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCGCCTGCCCCTTATACTaGAGGTCAAATCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFACPLY*RSNLRG
Trigger: GCCCCTGAGATTTGACCTCCAGTATAAGGGGCAGGC...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGCTCCACATTGTCAGCTaGGTTGGGGTCTCCCATGTG +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLLHIVS*VGVSHV
Trigger: CACATGGGAGACCCCAACCCAGCTGACAATGTGGAG...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGGCCATATTCTGTACTTaGACCTCTGCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQAIFCT*TSAENS
Trigger: GCTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGC...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CCA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCGCCATATTCTGTACTTaGACCTCTGCAGAGAACAGC +
Preference number: 4 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVAIFCT*TSAENS
Trigger: GCTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGC...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWLASRK*YLNSPG
Trigger: CCCCGGACTATTAAGATATCACTTCCTGGAGGCCAG...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGTTGTACAGAAGATGTaGGCGTCATCCTGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSVVQKM*ASSCWK
Trigger: CTTCCAGCAGGATGACGCTCACATCTTCTGTACAAC...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGTTCTCCATTCACTTaGGCAGCCACTGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSGSPFT*AATAVS
Trigger: AGATACTGCAGTGGCTGCTCAAGTGAATGGAGAACC...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR GCA 90 bp CCTGACTGTTCCCAGAGCTTCGTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGAAAGGTCAACCAATGTaGCACACCTCTCCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: PDCSQSFVENSVGVFTSEKGQPM*HTSPFP
Trigger: TGGGAAAGGAGAGGTGTGGCACATTGGTTGACCTTT...CTCCGAGGTGAAAACTCCCACACTGTTTTCTACGAAGCTCTGGGAACAGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR GCA 90 bp AGGCAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RQVPLPKATIISSPNVHCTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...ACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR GCA 90 bp CTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCACAGCTTTGGATCTCTaGTTCCAGCTGATCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LFRRADMCLHTVLKFWGLTALDL*FQLICC
Trigger: ACAACAGATCAGCTGGAAGCAGAGATCCAAAGCTGT...GAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCAAAGGTCAACCAATGTaGCACACCCATATACTGTTG +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSKGQPM*HTHILL
Trigger: CAACAGTATATGGGTGTGGCACATTGGTTGACCTTT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CCA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSTASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATATATACTGTTGCTGTTaGACCTGTCACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHIYCCC*TCHFLL
Trigger: GAGGAGAAAGTGACAGGTCCAACAGCAACAGTATAT...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR TCA 90 bp CATGCTTCCCAGACCCTCAGCAATTCTGTTGTGGGGAAGGAAATCCCTGACACTATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: HASQTLSNSVVGKEIPDTISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...AGTGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGAGGGTCTGGGAAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR TCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCGGTTCTCCATTCACTTaGGCAGCCACTGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFGSPFT*AATAVS
Trigger: AGATACTGCAGTGGCTGCTCAAGTGAATGGAGAACC...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR TCA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGTTCTCCATTCACTTaGGCAGCCACTGCAGTATCT +
Preference number: 4 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLGSPFT*AATAVS
Trigger: AGATACTGCAGTGGCTGCTCAAGTGAATGGAGAACC...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR GCA 90 bp AGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: SRHVPPHSSEVLGAPHCQVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...CTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGGGGTTGTGTTCCATaGCACAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSGGCVP*HSINFL
Trigger: CAGAAAATTGATGCTGTGGCATGGAACACAACCCCC...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCAGGAGAGCAGACATGTaGCTCCACACAGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFRRADM*LHTVLK
Trigger: CTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCT...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGTCTGCTGTGCCTCTTTaGCGTATTCCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWSAVPL*RIPLAH
Trigger: GTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGA...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCACAGTTCTGAAGTTCTaGGGGCTCCACATTGTCAGC +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFTVLKF*GLHIVS
Trigger: GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR TCA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTATCTCTGCTTCCAGCTaGTCTGTTGTACAGAAGATG +
Preference number: 4 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSISASS*SVVQKM
Trigger: CATCTTCTGTACAACAGATCAGCTGGAAGCAGAGAT...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGTTCCTTCTGTGCCATaGTTGCTAATCTCTTTACCT +
Preference number: 4 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGVPSVP*LLISLP
Trigger: AGGTAAAGAGATTAGCAAGCATGGCACAGAAGGAAC...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR GCA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGGGTTGTGTTCCATaGCACAGCATCAATTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWGGCVP*HSINFL
Trigger: CAGAAAATTGATGCTGTGGCATGGAACACAACCCCC...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGACAGCATCAATTTTCTaGCCTCCAGGAAGTGATATC +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLTASIF*PPGSDI
Trigger: GATATCACTTCCTGGAGGCCAGAAAATTGATGCTGT...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CCA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGATATACTGTTGCTGTTaGACCTGTCACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLIYCCC*TCHFLL
Trigger: GAGGAGAAAGTGACAGGTCCAACAGCAACAGTATAT...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CCA 90 bp ACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTCAGCAATTCTGTTGTaGGGAAGGAAATCCCTGACA +
Preference number: 4 (lower is better)
Translates to: TKSLFRRADMCLHTVLKFSAILL*GRKSLT
Trigger: TGTCAGGGATTTCCTTCCCCACAACAGAATTGCTGA...GAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369064.8
CDS-3UTR CAA 90 bp GCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: APKSASRRGSSRQDLGRWLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...CCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp CTGACCAGTCCTGCAGCCCGCAGGCTCTGCTGTGCCTCTTTGGCGTATTCCTCTTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LTSPAARRLCCASLAYSSSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...AGAGGAATACGCCAAAGAGGCACAGCAGAGCCTGCGGGCTGCAGGACTGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTGCTCTGAGCCCCGGATaGTCCTCTCCTTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: VSWVGVSHVREADGTRRFALSPG*SSPFPG
Trigger: TCCTGGGAAAGGAGAGGACAATCCGGGGCTCAGAGC...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LHIVSWVGVSHVREADGTSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: LKFWGLHIVSWVGVSHVRSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...CCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SWVGVSHVREADGTRRFLSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: SWVGVSHVREADGTRRFLAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGAAATTTCTTCGGCATTaGGGACCCTCGTGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: APKSASRRGSSRQDLGRWKFLRH*GPSCSV
Trigger: TACAGAACACGAGGGTCCCAAATGCCGAAGAAATTT...CCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCTGGGCCGGTGGGCGAACATCACACACCCATATACTGTaGCTGTTGGACCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: QLVAGAVPARIWAGGRTSHTHIL*LLDLSL
Trigger: AAGTGACAGGTCCAACAGCAACAGTATATGGGTGTG...TGATGTTCGCCCACCGGCCCAGATCCTGGCGGGAACTGCCCCTGCGACTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467982.6
CDS-3UTR CAA 90 bp CCCGGTGTAGAGCCCCAAAGTCAGCTAGTCGCAGGGGCAGTTCCCGCCAGGATCCCTTCTGTGCCATGCTaGCTAATCTCTTTACCTGAG +
Preference number: 5 (lower is better)
Translates to: PGVEPQSQLVAGAVPARIPSVPC*LISLPE
Trigger: CTCAGGTAAAGAGATTAGCAAGCATGGCACAGAAGG...GATCCTGGCGGGAACTGCCCCTGCGACTAGCTGACTTTGGGGCTCTACACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGGGGCAGTTCATAGGCTaGAGGGCGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: SWVGVSHVREADGTRRFLGQFIG*RASVSV
Trigger: CACAGATACACTCGCCCTCAAGCCTATGAACTGCCC...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTGGGCAGTTCATAGGCTaGAGGGCGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: LHIVSWVGVSHVREADGTGQFIG*RASVSV
Trigger: CACAGATACACTCGCCCTCAAGCCTATGAACTGCCC...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PHSSEVLGAPHCQLGWGLAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...GAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCTAGTTGGTAGGGGGTaGTGTTCCATGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: LHIVSWVGVSHVREADGTLVGRG*CSMPQH
Trigger: ATGCTGTGGCATGGAACACAACCCCCTACCAACTAG...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGGCAGTTCATAGGCTaGAGGGCGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCEGQFIG*RASVSV
Trigger: CACAGATACACTCGCCCTCAAGCCTATGAACTGCCC...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp ACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TVLKFWGLHIVSWVGVSHAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...ATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp ATATGCCTGGTAGAATCGTCACTCTGGGAGCTGGGAGGCCTGTCAGAGCCTGGGGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: ICLVESSLWELGGLSEPGGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...CCCAGGCTCTGACAGGCCTCCCAGCTCCCAGAGTGACGATTCTACCAGGCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CAA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: WVGVSHVREADGTRRFLPGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: LHIVSWVGVSHVREADGTGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTTTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: WVGVSHVREADGTRRFLPFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: KFWGLHIVSWVGVSHVRELCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCGCTCTGAGCCCCGGATaGTCCTCTCCTTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVALSPG*SSPFPG
Trigger: TCCTGGGAAAGGAGAGGACAATCCGGGGCTCAGAGC...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS TCA 90 bp AGCCTGCAAGCCTGTAAACCTTGGAGCCGGAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTTCACACCAGTGCCTACATCCTCAAA +
Preference number: 5 (lower is better)
Translates to: SLQACKPWSRRHRHL*YRAMFLHTSAYILK
Trigger: TTTGAGGATGTAGGCACTGGTGTGAAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGCTTGCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCCTAGTTGGTAGGGGGTaGTGTTCCATGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVLVGRG*CSMPQH
Trigger: ATGCTGTGGCATGGAACACAACCCCCTACCAACTAG...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGCTAGTTGGTAGGGGGTaGTGTTCCATGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWLVGRG*CSMPQH
Trigger: ATGCTGTGGCATGGAACACAACCCCCTACCAACTAG...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: LHTVLKFWGLHIVSWVGVFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...GACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGTTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: SEVLGAPHCQLGWGLPCEFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...CTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: VGVSHVREADGTRRFLPHLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCACTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGAGGTTCTCCATTCACTaGAGCAGCCACTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: KFWGLHIVSWVGVSHVRERFSIH*SSHCSI
Trigger: GATACTGCAGTGGCTGCTCAAGTGAATGGAGAACCT...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGAGGTTCTCCATTCACTaGAGCAGCCACTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: SWVGVSHVREADGTRRFLRFSIH*SSHCSI
Trigger: GATACTGCAGTGGCTGCTCAAGTGAATGGAGAACCT...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTAGCCATATTCTGTACTaGGACCTCTGCAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: VSWVGVSHVREADGTRRFSHILY*DLCREQ
Trigger: CTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGCT...AAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGCTCTGAGCCCCGGATaGTCCTCTCCTTTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLALSPG*SSPFPG
Trigger: TCCTGGGAAAGGAGAGGACAATCCGGGGCTCAGAGC...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp TGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCCTTCTGTGCCATGCTaGCTAATCTCTTTACCTGAG +
Preference number: 5 (lower is better)
Translates to: WVGVSHVREADGTRRFLPPSVPC*LISLPE
Trigger: CTCAGGTAAAGAGATTAGCAAGCATGGCACAGAAGG...AGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TCCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTTCTGGGGGCTCCACATaGTCAGCTGGGTTGGGGTCT +
Preference number: 5 (lower is better)
Translates to: SPNQVSFQESRHVPPHSSSGGST*SAGLGS
Trigger: AGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGA...AGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGAGGTTCTCCATTCACTaGAGCAGCCACTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: CLHTVLKFWGLHIVSWVGRFSIH*SSHCSI
Trigger: GATACTGCAGTGGCTGCTCAAGTGAATGGAGAACCT...CCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCAAGGTTCTCCATTCACTaGAGCAGCCACTGCAGTATC +
Preference number: 5 (lower is better)
Translates to: HSSEVLGAPHCQLGWGLPRFSIH*SSHCSI
Trigger: GATACTGCAGTGGCTGCTCAAGTGAATGGAGAACCT...TGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTAGCCATATTCTGTACTaGGACCTCTGCAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: LHIVSWVGVSHVREADGTSHILY*DLCREQ
Trigger: CTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGCT...AGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAGGGAGCACACCCATATACTGTaGCTGTTGGACCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: KFWGLHIVSWVGVSHVREHTHIL*LLDLSL
Trigger: AAGTGACAGGTCCAACAGCAACAGTATATGGGTGTG...CTCCCTCACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369064.8
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCCTTCTGTGCCATGCTaGCTAATCTCTTTACCTGAG +
Preference number: 5 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVPSVPC*LISLPE
Trigger: CTCAGGTAAAGAGATTAGCAAGCATGGCACAGAAGG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGGCAAGTCCCACTCCCCAAGGCGACGATTATCTCGAGTCCGAATGTTCACTGTCTAGTTGGTAGGGGGTaGTGTTCCATGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: RQVPLPKATIISSPNVHCLVGRG*CSMPQH
Trigger: ATGCTGTGGCATGGAACACAACCCCCTACCAACTAG...ACAGTGAACATTCGGACTCGAGATAATCGTCGCCTTGGGGAGTGGGACTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp ATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTCTAGTTGGTAGGGGGTaGTGTTCCATGCCACAGCAT +
Preference number: 5 (lower is better)
Translates to: MCLHTVLKFWGLHIVSWVLVGRG*CSMPQH
Trigger: ATGCTGTGGCATGGAACACAACCCCCTACCAACTAG...AACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGGGCAGTTCATAGGCTaGAGGGCGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLGQFIG*RASVSV
Trigger: CACAGATACACTCGCCCTCAAGCCTATGAACTGCCC...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CTGCTGTGCCTCTTTGGCGTATTCCTCTTGCTCACTCCCCACAGGGATGACCACCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: LLCLFGVFLLLTPHRDDHLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...GTGGTCATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAAGAGGCACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369051.7
ENST00000467982.6
CDS-3UTR CAA 90 bp GTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: VPPHSSEVLGAPHCQLGWLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...CCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: VGVSHVREADGTRRFLPHLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp TTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCAGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: FQESRHVPPHSSEVLGAPGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...TGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATCTATGTTTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: VSHVREADGTRRFLPHLCFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...ACATAGATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AGCTGGGTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGAAATTTCTTCGGCATTaGGGACCCTCGTGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SWVGVSHVREADGTRRFLKFLRH*GPSCSV
Trigger: TACAGAACACGAGGGTCCCAAATGCCGAAGAAATTT...CAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAACCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTTGGGGTCTCCCATGTGAGGGAGGCTGATGGCACTCGCAGGTTTTTGCCTCATAGCCATATTCTGTACTaGGACCTCTGCAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: VGVSHVREADGTRRFLPHSHILY*DLCREQ
Trigger: CTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGCT...ATGAGGCAAAAACCTGCGAGTGCCATCAGCCTCCCTCACATGGGAGACCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCCCTTCTGTGCCATGCTaGCTAATCTCTTTACCTGAG +
Preference number: 5 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSPSVPC*LISLPE
Trigger: CTCAGGTAAAGAGATTAGCAAGCATGGCACAGAAGG...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGCACCATCTCCAGAGTaGAGGTCCCAGGGTTCTCCA +
Preference number: 5 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWAPSPE*RSQGSP
Trigger: TGGAGAACCCTGGGACCTCAACTCTGGAGATGGTGC...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGGGAAGTCAAGCTGAATaGTCCCACACTGATGTGGCC +
Preference number: 5 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLGSQAE*SHTDVA
Trigger: GGCCACATCAGTGTGGGACAATTCAGCTTGACTTCC...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CCCCAAACCAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGCTCTGCTGTGCCTCTTaGGCGTATTCCTCTTGCTCA +
Preference number: 5 (lower is better)
Translates to: PQTKSLFRRADMCLHTVLLCCAS*AYSSCS
Trigger: TGAGCAAGAGGAATACGCCAAAGAGGCACAGCAGAG...CAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTGGTTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCTGGGTTGGGGTCTCCCATGTGAAATTTCTTCGGCATTaGGGACCCTCGTGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: VLKFWGLHIVSWVGVSHVKFLRH*GPSCSV
Trigger: TACAGAACACGAGGGTCCCAAATGCCGAAGAAATTT...CACATGGGAGACCCCAACCCAGCTGACAATGTGGAGCCCCCAGAACTTCAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTAGAAAACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATGGGCATACTCAGGGCAGTTCATAGGCTaGAGGGCGAGTGTATCTGTG +
Preference number: 5 (lower is better)
Translates to: VENSVGVFTSEKPRWAYSGQFIG*RASVSV
Trigger: CACAGATACACTCGCCCTCAAGCCTATGAACTGCCC...TGAGTATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTTTTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369051.7
CDS-3UTR CAA 90 bp AGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: RADMCLHTVLKFWGLHIVLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...GACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGGCTCCACATTGTCAGCAAATTTCTTCGGCATTaGGGACCCTCGTGTTCTGTA +
Preference number: 5 (lower is better)
Translates to: ADMCLHTVLKFWGLHIVSKFLRH*GPSCSV
Trigger: TACAGAACACGAGGGTCCCAAATGCCGAAGAAATTT...GCTGACAATGTGGAGCCCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGTTTGGCGTATTCCTCTaGCTCACTCCCCACAGGGAT +
Preference number: 5 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWFGVFL*LTPHRD
Trigger: ATCCCTGTGGGGAGTGAGCAAGAGGAATACGCCAAA...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp GTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGGGCACACCCATATACTGTaGCTGTTGGACCTGTCACTT +
Preference number: 5 (lower is better)
Translates to: VSFQESRHVPPHSSEVLGHTHIL*LLDLSL
Trigger: AAGTGACAGGTCCAACAGCAACAGTATATGGGTGTG...CCCCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000606933.5
CDS-3UTR CAA 90 bp AAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGGCCTTCTGTGCCATGCTaGCTAATCTCTTTACCTGAG +
Preference number: 5 (lower is better)
Translates to: KSLFRRADMCLHTVLKFWPSVPC*LISLPE
Trigger: CTCAGGTAAAGAGATTAGCAAGCATGGCACAGAAGG...CCAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS-3UTR CAA 90 bp CAAGTCTCTTTTCAGGAGAGCAGACATGTGCCTCCACACAGTTCTGAAGTTCTGCTTCCAGCTGATCTGTaGTACAGAAGATGTGAGCGT +
Preference number: 5 (lower is better)
Translates to: QVSFQESRHVPPHSSEVLLPADL*YRRCER
Trigger: ACGCTCACATCTTCTGTACAACAGATCAGCTGGAAG...CAGAACTTCAGAACTGTGTGGAGGCACATGTCTGCTCTCCTGAAAAGAGACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369051.7
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS TCA 90 bp GGGGAGAAAGTTGCTCATCTCTCAGCAACTGTAAACTTGCAAAGGTaGAATGAGTTACCAGAGCAACAGAAGCTTTCATTTCTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: GEKVAHLSATVNLQR*NELPEQQKLSFLSP
Trigger: TGGGGAAAGAAATGAAAGCTTCTGTTGCTCTGGTAACTCATTTCACCTTTGCAAGTTTACAGTTGCTGAGAGATGAGCAACTTTCTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479372.1
CDS TCA 90 bp GAAAGTTGCTCATCTCTCAGCAACTGTAAACTTGCAAAGGTGAAATaGGTTACCAGAGCAACAGAAGCTTTCATTTCTTTCCCCAATGAA +
Preference number: 5 (lower is better)
Translates to: ESCSSLSNCKLAKVK*VTRATEAFISFPNE
Trigger: TTCATTGGGGAAAGAAATGAAAGCTTCTGTTGCTCTGGTAACTCATTTCACCTTTGCAAGTTTACAGTTGCTGAGAGATGAGCAACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479372.1
CDS TCA 90 bp GAAATGAGTTACCAGAGCAACAGAAGCTTTCATTTCTTTCCCCAATaGAAGGACAGAGACTCTGATGCAGAAACTAATACAGATAAAACA +
Preference number: 5 (lower is better)
Translates to: EMSYQSNRSFHFFPQ*KDRDSDAETNTDKT
Trigger: TGTTTTATCTGTATTAGTTTCTGCATCAGAGTCTCTGTCCTTTCATTGGGGAAAGAAATGAAAGCTTCTGTTGCTCTGGTAACTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479372.1
CDS TCA 72 bp GCCTGTAAACCTTGGAGCCGGAGACACCGCCACCTCTaGTACAGGGCCATGTTCCTTCACACCAGTGCCTAC +
Preference number: 6 (lower is better)
Translates to: ACKPWSRRHRHL*YRAMFLHTSAY
Trigger: GTAGGCACTGGTGTGAAGGAACATGGCCCTGTATCAGAGGTGGCGGTGTCTCCGGCTCCAAGGTTTACAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000606933.5
CDS TCA 72 bp CGATGGGCATACTCAGCCTTGAACAACTGGCGAAGCTaGTCCCGTGAAGCCTCTAGCCTCCGGAAGGGTCGA +
Preference number: 6 (lower is better)
Translates to: RWAYSALNNWRS*SREASSLRKGR
Trigger: TCGACCCTTCCGGAGGCTAGAGGCTTCACGGGATCAGCTTCGCCAGTTGTTCAAGGCTGAGTATGCCCATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369054.6
CDS TCA 72 bp AGCTTAAAGGGGTTATCCTTGAACAACTGGCGAAGCTaGTCCCGTGAAGCCTCTAGCCTCCGGAAGGGTCGA +
Preference number: 6 (lower is better)
Translates to: SLKGLSLNNWRS*SREASSLRKGR
Trigger: TCGACCCTTCCGGAGGCTAGAGGCTTCACGGGATCAGCTTCGCCAGTTGTTCAAGGATAACCCCTTTAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369064.8
ENST00000466989.1
ENST00000467982.6
ENST00000606933.5
CDS CCA 72 bp AACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATaGGCATACTCAGCCGATAGCAGCTTCAGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: NSVGVFTSEKPR*AYSADSSFSPP
Trigger: TGGAGGACTGAAGCTGCTATCGGCTGAGTATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369051.7
ENST00000438568.6
ENST00000460794.1
ENST00000463555.1
ENST00000480070.5
ENST00000606933.5
CDS CCA 72 bp AACAGTGTGGGAGTTTTCACCTCGGAGAAACCACGATaGGCATACTCAGCCCTGATAAACGCCACTAGTGCA +
Preference number: 6 (lower is better)
Translates to: NSVGVFTSEKPR*AYSALINATSA
Trigger: TGCACTAGTGGCGTTTATCAGGGCTGAGTATGCCCATCGTGGTTTCTCCGAGGTGAAAACTCCCACACTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369064.8
ENST00000462578.1
CDS TCA 72 bp CCATGCCACAGCATCAATTTTCTGGCCTCCAGGAAGTaGTATCTTAATAGTCCGGGGTTCCTTCTGTGCCAT +
Preference number: 6 (lower is better)
Translates to: PCHSINFLASRK*YLNSPGFLLCH
Trigger: ATGGCACAGAAGGAACCCCGGACTATTAAGATATCACTTCCTGGAGGCCAGAAAATTGATGCTGTGGCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369051.7
ENST00000369053.3
ENST00000369054.6
ENST00000369064.8
ENST00000438568.6
ENST00000467982.6
ENST00000479372.1
ENST00000606933.5
CDS TCA 72 bp GTTGCTGTTGGACCTGTCACTTTCTCCTCAATCAAGTaGAGCTTAAAGGGGTTATCCTTGAACAACTGGCGA +
Preference number: 6 (lower is better)
Translates to: VAVGPVTFSSIK*SLKGLSLNNWR
Trigger: TCGCCAGTTGTTCAAGGATAACCCCTTTAAGCTTCACTTGATTGAGGAGAAAGTGACAGGTCCAACAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369064.8
ENST00000466989.1
ENST00000467982.6
ENST00000606933.5
CDS CAA 72 bp CCAGGAAGAAATCATGGTAAAAGCCATATTCTGTACTaGGACCTCTGCAGAGAACAGCACCTAGGAATTGTT +
Preference number: 6 (lower is better)
Translates to: PGRNHGKSHILY*DLCREQHLGIV
Trigger: AACAATTCCTAGGTGCTGTTCTCTGCAGAGGTCCAAGTACAGAATATGGCTTTTACCATGATTTCTTCCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369054.6
ENST00000369064.8
ENST00000606933.5