RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TARS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113407

Ensembl transcript IDs: ENST00000265112.8, ENST00000455217.6, ENST00000502508.5, ENST00000502553.5, ENST00000503422.1, ENST00000505012.5, ENST00000506040.1, ENST00000507716.5, ENST00000508361.5, ENST00000509410.1, ENST00000509731.5, ENST00000513066.3, ENST00000514259.5

Found 537 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCTAGCCGCAGAGGCAGTTCTCGCCAG +
Preference number: 1 (lower is better)
Translates to: RTRVSPVSAPDSSFL*STPKSASRRGSSRQ
Trigger: CTGGCGAGAACTGCCTCTGCGGCTAGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 90 bp CTGCCAGTGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAATCCTCTTTTCCTATATTCGCTCCT +
Preference number: 1 (lower is better)
Translates to: LPVARGHPESAVEDV*GDYLLESSFPIFAP
Trigger: AGGAGCGAATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCACTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 90 bp AGCTGCTGTAGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTGCGGATATTAACAGTGCCACTGATT +
Preference number: 1 (lower is better)
Translates to: SCCSRSIVSEMVRSP*TLLSLVRILTVPLI
Trigger: AATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR CCA 90 bp GGTGTTGTCGGCCAGGCCTTGACTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGG +
Preference number: 1 (lower is better)
Translates to: GVVGQALTNSTGNLI*CSFPRFRINLFTIR
Trigger: CCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCCGACAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
3UTR CCA 90 bp GTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATATTCGCTCCTAATGAATTCAATAAGT +
Preference number: 1 (lower is better)
Translates to: VIQSRLLKMFGVTTS*NPLFLYSLLMNSIS
Trigger: ACTTATTGAATTCATTAGGAGCGAATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR GCA 90 bp TCGAATCTTTTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTaGCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGC +
Preference number: 1 (lower is better)
Translates to: SNLFIQCTAWIQINV*HEFGIVELLSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGATTCGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR TCA 90 bp TCTTTTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATaGATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATT +
Preference number: 1 (lower is better)
Translates to: SFYSMYSLDPDQCLP*IWHRGIVVVPFGHI
Trigger: AATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR GCA 90 bp GGAATGAAATGCCATAAATTCTCTGGAGAGTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAGCCT +
Preference number: 1 (lower is better)
Translates to: GMKCHKFSGESPYLL*LPSTWRNFCVFLKP
Trigger: AGGCTTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAATTTATGGCATTTCATTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp CACTGGAACTACCATTACCTGGCGAGGGGACAGCCAAAAGGGCCATTTGCCCCCAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 2 (lower is better)
Translates to: HWNYHYLARGQPKGPFAPNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...GGGGGCAAATGGCCCTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp CACTGGAACTACCATTACCTGGCGAGGGGACAGCCAAAAGGGCCATTTGCCCCCGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: HWNYHYLARGQPKGPFAPAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...GGGGGCAAATGGCCCTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGTACATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 2 (lower is better)
Translates to: SYPGESCECSRQLVPMKYMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp CTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: LLESSYPGESCECSRQLVQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...AACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCCAGCTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 2 (lower is better)
Translates to: SSWMVAHWWYRPIASLICVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...ACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGTACTTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 2 (lower is better)
Translates to: SYPGESCECSRQLVPMKYFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...GTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp AATTTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: NFARVSNMRTPAEIYQRACQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...GGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
3UTR CAA 90 bp ATCTTCAATCTGCTCCATGGCACAGAATATGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAG +
Preference number: 2 (lower is better)
Translates to: IFNLLHGTEYVSIIL*ESSYPGESCECSRQ
Trigger: CTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATATTCTGTGCCATGGAGCAGATTGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp CTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 2 (lower is better)
Translates to: LDGCTLVVPPNRIFNLYVPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...GACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 2 (lower is better)
Translates to: YVSIILLESSYPGESCECESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 2 (lower is better)
Translates to: YVSIILLESSYPGESCECPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 2 (lower is better)
Translates to: FLILKLEKLQGTIFFQRACQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCATCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 2 (lower is better)
Translates to: WMVAHWWYRPIASLICMSSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...TGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp GTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 2 (lower is better)
Translates to: VSQLDPILRYLQGIFPGETGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...CTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCCCCGTGGACCTTATTGTCTCTTGTGCGGATATTAACAGTGCCACTGATTTTCACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 2 (lower is better)
Translates to: SPWTLLSLVRILTVPLIFTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...GAAAATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR GCA 90 bp TCTGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCAGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 2 (lower is better)
Translates to: SAMNLASWNCCRTFWAYSGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...TGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 2 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAACCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 2 (lower is better)
Translates to: TVFKLFLSLIPYFDISKEPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp GATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCAATGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 2 (lower is better)
Translates to: DGCTLVVPPNRIFNLYVNDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...ATTGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp AGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 2 (lower is better)
Translates to: SLIPYFDISKEFFRASRKSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...CTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TCCAGCTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: SSWMVAHWWYRPIASLICDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...ACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCTGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCAATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 2 (lower is better)
Translates to: SAMNLASWNCCRTFWAYSMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...TGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CAA 90 bp AGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTAACAGTGCCACTGATTTTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: SRSIVSEMVRSPWTL*SLVRILTVPLIFSF
Trigger: AAAAGAGAAAATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CCA 90 bp GTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATTGTCTCTTGTGCGGATATTAGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 2 (lower is better)
Translates to: VSEMVRSPWTLLSLVRILGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...TAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCACATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TCCCCGTGGACCTTATTGTCTCTTGTGCGGATATTAACAGTGCCACTGATTTTCAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 2 (lower is better)
Translates to: SPWTLLSLVRILTVPLIFNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...GAAAATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CCA 90 bp TTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 2 (lower is better)
Translates to: FIQCTAWIQINVCHEFGIGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...GATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR GCA 90 bp GAATATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 2 (lower is better)
Translates to: EYVSIILLESSYPGESCEISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...CTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp GTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGCATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 2 (lower is better)
Translates to: VSQLDPILRYLQGIFPGEHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...CTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 2 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TGTAGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATTGTCTATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 2 (lower is better)
Translates to: CSRSIVSEMVRSPWTLLSMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...AGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR TCA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACGTTACGCCTGCAGGTTaGCCTATTCAGACTTTGCCA +
Preference number: 2 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYVTPAG*PIQTLP
Trigger: TGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAAC...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR TCA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAAGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 2 (lower is better)
Translates to: TVFKLFLSLIPYFDISKEASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp AGTGACTTTAATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGAATGGAATCGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 2 (lower is better)
Translates to: SDFNWLAIFFCLFCQNGIASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...GATTCCATTCTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509731.5
3UTR-3UTR TCA 90 bp TTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: FKLFLSLIPYFDISKEFFQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...GAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp GGTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTATCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 2 (lower is better)
Translates to: GSWSIHLFIQYPAFELVVSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...TACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATTTAAAATTCTTCTTCTaGCTGTTTGCTGCGGAACTC +
Preference number: 2 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYLKFFF*LFAAEL
Trigger: GAGTTCCGCAGCAAACAGGCAGAAGAAGAATTTTAA...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CCA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 2 (lower is better)
Translates to: SHTSISPRNFSGRVERFSIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR CAA 90 bp TTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCA +
Preference number: 2 (lower is better)
Translates to: LFNVQPGSRSMSAMN*ASWNCCRTFWAYSS
Trigger: TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR TCA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 2 (lower is better)
Translates to: SHTSISPRNFSGRVERFSSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: SHTSISPRNFSGRVERFSDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 2 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp ATTCTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTATCATCATAGCCACTTaGAATGTCCCAATTAGAATT +
Preference number: 2 (lower is better)
Translates to: ILWRVSISALPSQYVEEFIIIAT*NVPIRI
Trigger: AATTCTAATTGGGACATTGCAAGTGGCTATGATGAT...AAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
3UTR-3UTR CCA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 2 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTIKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp GATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCAATACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 2 (lower is better)
Translates to: DGCTLVVPPNRIFNLYVNTGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...ATTGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
3UTR-3UTR TCA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 2 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 2 (lower is better)
Translates to: SHTSISPRNFSGRVERFSISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAATTGGCTTGCTATCATCATCATAGCCACTTaGAATGTCCCAATTAGAATT +
Preference number: 2 (lower is better)
Translates to: FRINLFTIRQSDFNWLAIIIIAT*NVPIRI
Trigger: AATTCTAATTGGGACATTGCAAGTGGCTATGATGAT...GATAGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
3UTR-3UTR CCA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 2 (lower is better)
Translates to: TVFKLFLSLIPYFDISKECLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 2 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR GCA 90 bp TCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAAAAAATAGTTACGCCTaGAGGTTGACCTATTCAGAC +
Preference number: 2 (lower is better)
Translates to: SISALPSQYVEEFLCIFKKNSYA*RLTYSD
Trigger: GTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT...TTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CCA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 2 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR TCA 90 bp AATCTTTTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTTTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 2 (lower is better)
Translates to: NLFIQCTAWIQINVCHEFFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...AAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGATT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR TCA 72 bp AGCCGCAGAGGCAGTTCTCGCCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGTCCTGGGCAGTTCATG +
Preference number: 3 (lower is better)
Translates to: SRRGSSRQDLGR*SNIRQCPGQFM
Trigger: CATGAACTGCCCAGGACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAACTGCCTCTGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR TCA 72 bp GTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCTAGCCGCAGAGGCAGT +
Preference number: 3 (lower is better)
Translates to: VSPVSAPDSSFL*STPKSASRRGS
Trigger: ACTGCCTCTGCGGCTAGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp GAATATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 3 (lower is better)
Translates to: EYVSIILLESSYPGESCENPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...CTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR GCA 72 bp CTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCTATGAAGTACCCCAAA +
Preference number: 3 (lower is better)
Translates to: LLESSYPGESCE*SRQLVPMKYPK
Trigger: TTTGGGGTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp ATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACATCTATAGACTGTGGTAGTGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 3 (lower is better)
Translates to: MRTPAEIYQRATSIDCGSVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...ACTACCACAGTCTATAGATGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp GCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAATCCTCTTTTCCTATA +
Preference number: 3 (lower is better)
Translates to: ARGHPESAVEDV*GDYLLESSFPI
Trigger: TATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR GCA 72 bp TCTTCTTCTGCCTGTTTGCTGCGGAACTCTTTGAGCTaGTGTAGCCGCTCGATAGTTTCAGAAATGGTGCGT +
Preference number: 3 (lower is better)
Translates to: SSSACLLRNSLS*CSRSIVSEMVR
Trigger: ACGCACCATTTCTGAAACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAAACAGGCAGAAGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR CCA 72 bp GGCAACTGGAAATCCAGCTGGATGGTTGCACACTGGTaGTACCGCCCAATCGCATCTTTAATCTGTATGTCA +
Preference number: 3 (lower is better)
Translates to: GNWKSSWMVAHW*YRPIASLICMS
Trigger: TGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp ATGGGCAACTGGAAATCCAGCTGGATGGTTGCACACTaGTGGTACCGCCCAATCGCATCTTTAATCTGTATG +
Preference number: 3 (lower is better)
Translates to: MGNWKSSWMVAH*WYRPIASLICM
Trigger: CATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTTGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp TACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTaGAACTACCATTACCTGGCGAGGGGACAGCCAAAA +
Preference number: 3 (lower is better)
Translates to: YLLGIFITGWSH*NYHYLARGQPK
Trigger: TTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR GCA 72 bp AAATCTGATGGGCAACTGGAAATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCCAATCGCATCTTTAAT +
Preference number: 3 (lower is better)
Translates to: KSDGQLEIQLDG*TLVVPPNRIFN
Trigger: ATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTTGCCCATCAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp AGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTGCGGATATTAACAGTG +
Preference number: 3 (lower is better)
Translates to: SRSIVSEMVRSP*TLLSLVRILTV
Trigger: CACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp TTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 3 (lower is better)
Translates to: FIQCTAWIQINVCHEFGINPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...GATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 3 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYSYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp AGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCTGGAATCCTCTTTTCCTAAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: SRLLKMFGVTTSWNPLFLREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...TAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 3 (lower is better)
Translates to: SHTSISPRNFSGRVERFSSYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp TGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCATTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 3 (lower is better)
Translates to: WMVAHWWYRPIASLICMSLLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...TGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp CTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 3 (lower is better)
Translates to: LWRVSISALPSQYVEEFLRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...CAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp TCTGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 3 (lower is better)
Translates to: SAMNLASWNCCRTFWAYSFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...TGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp AGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATATTCGCTCCTAATGAAT +
Preference number: 3 (lower is better)
Translates to: SRLLKMFGVTTS*NPLFLYSLLMN
Trigger: ATTCATTAGGAGCGAATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CCA 72 bp GGCCAGGCCTTGACTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTT +
Preference number: 3 (lower is better)
Translates to: GQALTNSTGNLI*CSFPRFRINLF
Trigger: AAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
3UTR-3UTR CAA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATTCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 3 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR TCA 72 bp TCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATaGATTTGGCATCGTGGAATTGTTGTCGTACCTTTT +
Preference number: 3 (lower is better)
Translates to: SMYSLDPDQCLP*IWHRGIVVVPF
Trigger: AAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR CCA 72 bp GGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTTTGGGCATATTCATCA +
Preference number: 3 (lower is better)
Translates to: GSRSMSAMNLAS*NCCRTFWAYSS
Trigger: TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp TGGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 3 (lower is better)
Translates to: WCSFPRFRINLFTIRQSDRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...GTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
3UTR GCA 72 bp TGCCATAAATTCTCTGGAGAGTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGGAATTTTTGTGTATTT +
Preference number: 3 (lower is better)
Translates to: CHKFSGESPYLL*LPSTWRNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAATTTATGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR GCA 72 bp TTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTaGCATGAATTTGGCATCGTGGAATTGTTGTCGTAC +
Preference number: 3 (lower is better)
Translates to: FIQCTAWIQINV*HEFGIVELLSY
Trigger: GTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp TTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCTTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 3 (lower is better)
Translates to: FIQCTAWIQINVCHEFGILLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...GATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR-3UTR CAA 90 bp GGTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTAAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 3 (lower is better)
Translates to: GSWSIHLFIQYPAFELVVREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...TACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp GCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAATTGGCTTGCTATCTTTTATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 3 (lower is better)
Translates to: ASTCLPSGKVTLIGLLSFIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...AAAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
3UTR-3UTR CAA 90 bp TCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAACGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 3 (lower is better)
Translates to: SISALPSQYVEEFLCIFKRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...TTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp GGTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTAATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 3 (lower is better)
Translates to: GSWSIHLFIQYPAFELVVIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...TACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR-3UTR CAA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 3 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCGAGGCGGGTGGGAGGTaGGCTAGCGCCCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: YVSIILLESSYPGESCECEAGGR*ASARDL
Trigger: CAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTC...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCC +
Preference number: 4 (lower is better)
Translates to: WPEVIQSRLLKMFGVTTSIQLDG*TLVVPP
Trigger: GGGCGGTACCACCAGTGTGCAACCATCCAGCTGGAT...GGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCCAGGTCCCACGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NLRSSKVQSSSRGRSRSHASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...GTGGGACCTGGACCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCCAGGTCCCACTTGTCGGCCAGGCCTTaGCTCAGCTCGACCTCCATC +
Preference number: 4 (lower is better)
Translates to: NLRSSKVQSSSRGRSRSHLSARP*LSSTSI
Trigger: GATGGAGGTCGAGCTGAGTCAAGGCCTGGCCGACAA...GTGGGACCTGGACCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR CCA 90 bp TGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: WPEVIQSRLLKMFGVTTSMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: WPEVIQSRLLKMFGVTTSTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...GGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCCAGGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: SSNLRSSKVQSSSRGRSRRTTKR*ENPKAT
Trigger: CGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCG...CCTGGACCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGAGGCGGGTGGGAGGTaGGCTAGCGCCCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLEAGGR*ASARDL
Trigger: CAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTC...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: LLESSYPGESCECSRQLVVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...AACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CACTGGAACTACCATTACCTGGCGAGGGGACAGCCAAAAGGGCCATTTGCCCCCTTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: HWNYHYLARGQPKGPFAPFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...GGGGGCAAATGGCCCTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: WPEVIQSRLLKMFGVTTSNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...GGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCTGGAATCCTCTTTTCCTAGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SRLLKMFGVTTSWNPLFLASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...TAGGAAAAGAGGATTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: YVSIILLESSYPGESCECGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTCTAGCGCCCGGGACTTaGCCTCGGCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSLAPGT*PRLDQL
Trigger: CAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAG...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS-3UTR TCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGCCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: FLILKLEKLQGTIFFQRAPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCATGCTGCGGAACTCTTTaGGCTGCTGTAGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: WMVAHWWYRPIASLICMSCCGTL*AAVAAR
Trigger: TCGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCA...TGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSSSNLRSSKVQSSSRGRGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...CCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTCTAGCGCCCGGGACTTaGCCTCGGCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFLAPGT*PRLDQL
Trigger: CAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAG...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS-3UTR CCA 90 bp AATTTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: NFARVSNMRTPAEIYQRAMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: YVSIILLESSYPGESCECTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCAATCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: DGCTLVVPPNRIFNLYVNRTTKR*ENPKAT
Trigger: CGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCG...ATTGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGCCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTCCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTIPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: IILLESSYPGESCECSRQDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...CTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATGCTGCGGAACTCTTTaGGCTGCTGTAGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQCCGTL*AAVAAR
Trigger: TCGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCA...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATCGGCCTACTCTCCGCTaGCCTTGGTCTGGACGCTTT +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNRPTLR*PWSGRF
Trigger: AAAGCGTCCAGACCAAGGTCAGCGGAGAGTAGGCCG...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS-3UTR GCA 90 bp AACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCCAGGTCCCACGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: NLRSSKVQSSSRGRSRSHESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...GTGGGACCTGGACCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAAATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCC +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQIQLDG*TLVVPP
Trigger: GGGCGGTACCACCAGTGTGCAACCATCCAGCTGGAT...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCC +
Preference number: 4 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTIIQLDG*TLVVPP
Trigger: GGGCGGTACCACCAGTGTGCAACCATCCAGCTGGAT...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CACTGGAACTACCATTACCTGGCGAGGGGACAGCCAAAAGGGCCATTTGCCCCCTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: HWNYHYLARGQPKGPFAPCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...GGGGGCAAATGGCCCTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: LLESSYPGESCECSRQLVNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...AACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATCCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATCCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GTGCCAATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VPIHCLSFLILKLEKLQGPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...ACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTGCTGCGGAACTCTTTaGGCTGCTGTAGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNCCGTL*AAVAAR
Trigger: TCGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCA...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp CTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCGTTACGCCTGCAGGTTaGCCTATTCAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LDGCTLVVPPNRIFNLYVVTPAG*PIQTLP
Trigger: TGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAAC...GACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GAATATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGGTTACGCCTGCAGGTTaGCCTATTCAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: EYVSIILLESSYPGESCEVTPAG*PIQTLP
Trigger: TGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAAC...CTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGTAGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATTGTCTTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: CSRSIVSEMVRSPWTLLSSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...AGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSSSNLRSSKVQSSSRGRSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...CCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp TCCAGCTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: SSWMVAHWWYRPIASLICESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...ACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGAGTCAAGTCCCCAATaGGCGTGCGCCTTTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSESSPQ*ACAFPP
Trigger: GGGAGGAAAGGCGCACGCGCATTGGGGACTTGACTC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS-3UTR CCA 90 bp ACCCATTATGTGAGCACTAGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: THYVSTRVPIHCLSFLILSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...GAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCTAGTGCTCACATAATGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: LDGCTLVVPPNRIFNLYVSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...GACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTACATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: WNLRTRVSPVSAPDSSFLHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...TAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AGCAATAACGGTGTTGTCGGCCAGGCCTTGACTAATTCCACAGGCAATTTGATATGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: SNNGVVGQALTNSTGNLIWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...TATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCCGACAACACCGTTATTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CCA 90 bp CTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LWRVSISALPSQYVEEFLGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...CAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSSSNLRSSKVQSSSRGRMVRSP*TLLSLV
Trigger: CACAAGAGACAATAAGGTCCACGGGGAACGCACCAT...CCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR TCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLRTTKR*ENPKAT
Trigger: CGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCG...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp ATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGAATGGAATCATGTTCTGCTGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: IGLLSFSAFSARMESCSAASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...AGCAGAACATGATTCCATTCTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR TCA 90 bp ACCCATTATGTGAGCACTAGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: THYVSTRVPIHCLSFLILASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...GAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCTAGTGCTCACATAATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp CTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: LWRVSISALPSQYVEEFLQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...CAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp TGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTAATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: WNLRTRVSPVSAPDSSFLIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...TAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp AGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: SLIPYFDISKEFFRASRKGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...CTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCC +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSIQLDG*TLVVPP
Trigger: GGGCGGTACCACCAGTGTGCAACCATCCAGCTGGAT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGTTAAAATTCTTCTTCTaGCTGTTTGCTGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: SSYPGESCECSRQLVPMKLKFFF*LFAAEL
Trigger: GAGTTCCGCAGCAAACAGGCAGAAGAAGAATTTTAA...CTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTAAAAAATAGTTACGCCTaGAGGTTGACCTATTCAGAC +
Preference number: 4 (lower is better)
Translates to: WNLRTRVSPVSAPDSSFLKNSYA*RLTYSD
Trigger: GTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT...TAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTAGCGCCCGGGACTTaGCCTCGGCTGGACCAGCTG +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLLAPGT*PRLDQL
Trigger: CAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAG...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS-3UTR CCA 90 bp AGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAATCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: RVPIHCLSFLILKLEKLQSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...TTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCCAGCTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SSWMVAHWWYRPIASLICNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...ACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATCCGCTGACCTTGGTCTaGACGCTTTCCAGAGTCAAG +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYPLTLV*TLSRVK
Trigger: CTTGACTCTGGAAAGCGTCCAGACCAAGGTCAGCGG...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS-3UTR TCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFRTTKR*ENPKAT
Trigger: CGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCG...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAGCCTGCCTCCCATCTTCCCTaGAGGACTGCTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YLLCLPSTWRNFCVFLKPASHLP*RTAGLL
Trigger: GAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGC...AGGCTTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: SSSSNLRSSKVQSSSRGRPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...CCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IHCLSFLILKLEKLQGTICQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...GATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATTGTCTCTTGTGCGGATATTATGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VSEMVRSPWTLLSLVRILCQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...TAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR TCA 90 bp AATTTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCATGGCACAGAATATGTaGGCATCATCCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NFARVSNMRTPAEIYQRAMAQNM*ASSCWN
Trigger: ATTCCAACAGGATGATGCTCACATATTCTGTGCCAT...GGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATTCTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ILWRVSISALPSQYVEEFPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...AAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAAGTTACGCCTGCAGGTTaGCCTATTCAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQVTPAG*PIQTLP
Trigger: TGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAAC...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGCCATGGCATTCCAGATaGGGGAATGGCCACAGATGC +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLPWHSR*GNGHRC
Trigger: GCATCTGTGGCCATTCCCTCATCTGGAATGCCATGG...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455217.6
CDS-3UTR TCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATTGTCGGCCAGGCCTTaGAGGAAGAAAAGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQLSARP*RKKRGG
Trigger: GCCTCCTCTTTTCTTCCTTCAAGGCCTGGCCGACAA...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455217.6
CDS-3UTR GCA 90 bp TGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCTCTTCCCTGAAGGACTaGTGGCCTTCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: CLSFLILKLEKLQGTIFFSSLKD*WPSPQT
Trigger: TGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA...GAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp TTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACAGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FARVSNMRTPAEIYQRATDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...TGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGTCCAGGATCCAGATCAATGTCTaGCATGAATTTGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: SSNLRSSKVQSSSRGRSRIQINV*HEFGIV
Trigger: CACGATGCCAAATTCATGGCAGACATTGATCTGGAT...CCTGGACCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR CCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTGGAAAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: QCTAWIQINVCHEFGIVENWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...TTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCAGGCCAAGGATTCAACTGCACCACCCTCTGTATCTTAACTGCAGTTTATCATGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SGQGFNCTTLCILTAVYHGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...ATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCAGTTGAATCCTTGGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: LLESSYPGESCECSRQLVMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...AACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GGATTCAACTGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GFNCTTLCILTAVYHHSHCQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...GTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCAGTTGAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR TCA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTIDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATCGGAACTCTTTGAGCTaGTGTAGCCGCTCGATAGTT +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYRNSLS*CSRSIV
Trigger: AACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCG...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGCGGAACTCTTTGAGCTaGTGTAGCCGCTCGATAGTT +
Preference number: 4 (lower is better)
Translates to: SLIPYFDISKEFFRASRKRNSLS*CSRSIV
Trigger: AACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCG...CTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: FLILKLEKLQGTIFFQRAGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATCATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAACAGGTTGGTCCCACTaGAACTACCATTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSTGWSH*NYHYLA
Trigger: CGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGT...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
3UTR CAA 72 bp GTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQPGSRSMSAMN*ASWNCCRTFWA
Trigger: TGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp ATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: IHCLSFLILKLEKLQGTIPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...GATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GAATATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: EYVSIILLESSYPGESCESCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...CTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAACCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTTACGCCTGCAGGTTaGCCTATTCAGACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSVTPAG*PIQTLP
Trigger: TGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAAC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTCTTCCCTGAAGGACTaGTGGCCTTCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLSSLKD*WPSPQT
Trigger: TGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGTAGCCGCTCGATAGTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATTGTCTATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: CSRSIVSEMVRSPWTLLSIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...AGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTATCGAGCGGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAACATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: RVPIHCLSFLILKLEKLQHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...TTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAAGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTCCTGGGCAGTTCATaGGTTTCAGGGCAAACAGCT +
Preference number: 4 (lower is better)
Translates to: FIQCTAWIQINVCHEFGIVLGSS*VSGQTA
Trigger: AGCTGTTTGCCCTGAAACCCATGAACTGCCCAGGAC...GATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCCATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGGTTTAGTCATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SHTSISPRNFSGRVERFSHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...ACTAAACCTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTTTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp ATATGGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: IWCSFPRFRINLFTIRQSGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...ACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CTGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCTCGATGAACAATCACTaGCCTTTTCTTATCATCACC +
Preference number: 4 (lower is better)
Translates to: LDGCTLVVPPNRIFNLYVSMNNH*PFLIIT
Trigger: GGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGA...GACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp ATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACATCTATAGACTGTGGTAGTTGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: MRTPAEIYQRATSIDCGSCCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...ACTACCACAGTCTATAGATGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQMVRSP*TLLSLV
Trigger: CACAAGAGACAATAAGGTCCACGGGGAACGCACCAT...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
3UTR CAA 72 bp GTTGTCGGCCAGGCCTTGACTAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCAAGATTCCGCATCAAC +
Preference number: 4 (lower is better)
Translates to: VVGQALTNSTGN*IWCSFPRFRIN
Trigger: GTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCCGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR TCA 90 bp AATCTTTTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACG +
Preference number: 4 (lower is better)
Translates to: NLFIQCTAWIQINVCHEFRTTKR*ENPKAT
Trigger: CGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCG...AAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFCQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAACCCGTGTGTCTAACATaGGGACCCCGGCAGAGATCT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKPVCLT*GPRQRS
Trigger: AGATCTCTGCCGGGGTCCTCATGTTAGACACACGGG...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp CGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACATCTATATTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVSNMRTPAEIYQRATSIFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...TATAGATGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp ATCAGGCAAAGTGACTTTAATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGCAGGACCTTGGCCGATaGTCAAACATAAGGCAGTGT +
Preference number: 4 (lower is better)
Translates to: IRQSDFNWLAIFFCLFCQQDLGR*SNIRQC
Trigger: ACACTGCCTTATGTTTGATCATCGGCCAAGGTCCTG...CTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR TCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGATGGCACAGAATATGTaGGCATCATCCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGMAQNM*ASSCWN
Trigger: ATTCCAACAGGATGATGCTCACATATTCTGTGCCAT...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCAATATGGCACAGAATATGTaGGCATCATCCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: DGCTLVVPPNRIFNLYVNMAQNM*ASSCWN
Trigger: ATTCCAACAGGATGATGCTCACATATTCTGTGCCAT...ATTGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTCCCAAGATGGCTCGATaGACAATCACTGGCCTTTTC +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFPKMAR*TITGLF
Trigger: GAAAAGGCCAGTGATTGTTCATCGAGCCATCTTGGG...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTGCTGCGGAACTCTTTaGGCTGCTGTAGCCGCTCGA +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVCCGTL*AAVAAR
Trigger: TCGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTTCTTCCCTGAAGGACTaGTGGCCTTCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFSSLKD*WPSPQT
Trigger: TGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCTTCCCTGAAGGACTaGTGGCCTTCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFSSLKD*WPSPQT
Trigger: TGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMESPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCATCCAGCTGGATGGTTaGACACTGGTGGTACCGCCC +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVIQLDG*TLVVPP
Trigger: GGGCGGTACCACCAGTGTGCAACCATCCAGCTGGAT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGATCCAGATCAATGTCTaGCATGAATTTGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGIQINV*HEFGIV
Trigger: CACGATGCCAAATTCATGGCAGACATTGATCTGGAT...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGGAACTCTTTGAGCTaGTGTAGCCGCTCGATAGTT +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMERNSLS*CSRSIV
Trigger: AACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCGGAACTCTTTGAGCTaGTGTAGCCGCTCGATAGTT +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFRNSLS*CSRSIV
Trigger: AACTATCGAGCGGCTACAGCAGCTCAAAGAGTTCCG...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGTTAAAATTCTTCTTCTaGCTGTTTGCTGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: FLILKLEKLQGTIFFQRALKFFF*LFAAEL
Trigger: GAGTTCCGCAGCAAACAGGCAGAAGAAGAATTTTAA...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR GCA 90 bp CACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCAAAAATAGTTACGCCTaGAGGTTGACCTATTCAGAC +
Preference number: 4 (lower is better)
Translates to: HCLSFLILKLEKLQGTIFKNSYA*RLTYSD
Trigger: GTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT...GAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR GCA 90 bp AATTTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCATCATCATAGCCACTTaGAATGTCCCAATTAGAATT +
Preference number: 4 (lower is better)
Translates to: NFARVSNMRTPAEIYQRAIIIAT*NVPIRI
Trigger: AATTCTAATTGGGACATTGCAAGTGGCTATGATGAT...GGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMESLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CGCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAATTGGCTTGCTATCTTTTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTG +
Preference number: 4 (lower is better)
Translates to: RINLFTIRQSDFNWLAIFSLKDC*PSPQTL
Trigger: CAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGA...AAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR CCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAACATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: CLSFLILKLEKLQGTIFFHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...GAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505012.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAAGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCATAAGGCAGTGTCCTaGGCAGTTCATGGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEHKAVS*AVHGFQ
Trigger: CTGAAACCCATGAACTGCCCAGGACACTGCCTTATG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAATTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGCTTCAATCTGCTCCATaGCACAGAATATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGLQSAP*HRICEH
Trigger: ATGCTCACATATTCTGTGCCATGGAGCAGATTGAAG...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTGGAACTTCAATCTGCTCCATaGCACAGAATATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QCTAWIQINVCHEFGIVELQSAP*HRICEH
Trigger: ATGCTCACATATTCTGTGCCATGGAGCAGATTGAAG...TTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGCTGTATGTCAATCTTTaGGCCATAGAAAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGLYVNL*AIESSI
Trigger: GATGGAGCTTTCTATGGCCCAAAGATTGACATACAG...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: SLIPYFDISKEFFRASRKNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...CTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTGGAAATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: QCTAWIQINVCHEFGIVEIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...TTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
3UTR CAA 72 bp ATAGTTTCAGAAATGGTGCGTTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTAACAGTGCCACTGATT +
Preference number: 4 (lower is better)
Translates to: IVSEMVRSPWTL*SLVRILTVPLI
Trigger: AATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGAACGCACCATTTCTGAAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTTGTCGGCCAGGCCTTGACTAATTCCACAGGCAATTTGATATGGTGTAGTTTTGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: VVGQALTNSTGNLIWCSFDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...AAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCCGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR TCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGCCTTTCCTCCCTTCTaGCTTTATGTGGAACAATCA +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQAFPPF*LYVEQS
Trigger: TGATTGTTCCACATAAAGTCAGAAGGGAGGAAAGGC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS-3UTR GCA 90 bp GTGACTTTAATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGAATGGAATCATCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTLIGLLSFSAFSARMESSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...TGATTCCATTCTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR GCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGGTGAGTCCTGTGAGTaGTCCAGACAGCTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVGESCE*SRQLVP
Trigger: AGGAACGAGCTGTCTGGAGCACTCACAGGACTCACC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: FLILKLEKLQGTIFFQRAISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp AGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATTAAAATTCTTCTTCTaGCTGTTTGCTGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: SYACRLTYSDFAKLLQVQLKFFF*LFAAEL
Trigger: GAGTTCCGCAGCAAACAGGCAGAAGAAGAATTTTAA...TTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGGACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: SSSSNLRSSKVQSSSRGRTGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...CCGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505012.5
ENST00000509731.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATCTTCAATCTGCTCCATaGCACAGAATATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYLQSAP*HRICEH
Trigger: ATGCTCACATATTCTGTGCCATGGAGCAGATTGAAG...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTGGATGGTTGCACACTaGTGGTACCGCCCAATCGCA +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVWMVAH*WYRPIA
Trigger: TGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTCGATGAACAATCACTaGCCTTTTCTTATCATCACC +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGSMNNH*PFLIIT
Trigger: GGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGCCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: VSQLDPILRYLQGIFPGECCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...CTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGTAGAAAGATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLIPYFDISKEFFRASRKIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...CTTTCTACTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCAATCATAGACTCTTTCCATaGCTAATTCCACAGGCAATT +
Preference number: 4 (lower is better)
Translates to: DGCTLVVPPNRIFNLYVNHRLFP*LIPQAI
Trigger: AATTGCCTGTGGAATTAGCCATGGAAAGAGTCTATG...ATTGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507716.5
CDS-3UTR TCA 90 bp CTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSFLILKLEKLQGTIFFQIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...CTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505012.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TTGACTAATTCCACAGGCAATTTGATATGGTGTAGTTTTCCAAGATTCCGCATCGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: LTNSTGNLIWCSFPRFRIASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...GATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR TCA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: CHEFGIVELLSYLLGIFIDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...GATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR TCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTTTGCAGGAAGCTGTGTaGCTAATTCCACAGGCAATT +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFLQEAV*LIPQAI
Trigger: AATTGCCTGTGGAATTAGTCACACAGCTTCCTGCAA...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000455217.6
CDS-3UTR GCA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAAGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: TVFKLFLSLIPYFDISKEESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp TGGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: WCSFPRFRINLFTIRQSDDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...GTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR GCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAAATCCAGATCAATGTCTaGCATGAATTTGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQIQINV*HEFGIV
Trigger: CACGATGCCAAATTCATGGCAGACATTGATCTGGAT...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATAAAAATAGTTACGCCTaGAGGTTGACCTATTCAGAC +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYKNSYA*RLTYSD
Trigger: GTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: SPYLLCLPSTWRNFCVFLAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...TAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: TVFKLFLSLIPYFDISKEFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAACTTCAATCTGCTCCATaGCACAGAATATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQLQSAP*HRICEH
Trigger: ATGCTCACATATTCTGTGCCATGGAGCAGATTGAAG...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGCTGTATGTCAATCTTTaGGCCATAGAAAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLLYVNL*AIESSI
Trigger: GATGGAGCTTTCTATGGCCCAAAGATTGACATACAG...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAATTGGCTTGCTACTGTATGTCAATCTTTaGGCCATAGAAAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: DSASTCLPSGKVTLIGLLLYVNL*AIESSI
Trigger: GATGGAGCTTTCTATGGCCCAAAGATTGACATACAG...TAGCAAGCCAATTAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCATGGTTGCACACTGGTaGTACCGCCCAATCGCATCT +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLMVAHW*YRPIAS
Trigger: AGATGCGATTGGGCGGTACCACCAGTGTGCAACCAT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCGGAAATCCAGCTGGATaGTTGCACACTGGTGGTACC +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLGNPAG*LHTGGT
Trigger: GGTACCACCAGTGTGCAACCATCCAGCTGGATTTCC...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SISALPSQYVEEFLCIFKNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...TTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTTCGATGAACAATCACTaGCCTTTTCTTATCATCACC +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVSMNNH*PFLIIT
Trigger: GGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGA...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGGAACTACCATTACCTaGCGAGGGGACAGCCAAAAG +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVGTTIT*RGDSQK
Trigger: CTTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYCCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYMVRSP*TLLSLV
Trigger: CACAAGAGACAATAAGGTCCACGGGGAACGCACCAT...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS-3UTR TCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
CDS-3UTR TCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLCQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTGCCAATACACTGCCTaGGCTTCCTCATCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVCQYTA*ASSSSN
Trigger: GTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAAAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAATCTTCCCTGAAGGACTaGTGGCCTTCTCCTCAAACA +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKSSLKD*WPSPQT
Trigger: TGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCTCTCCATATCTGCTTTaGCTTCCCAGTACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLSPYLL*LPSTWR
Trigger: CCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TGGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: WCSFPRFRINLFTIRQSDISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...GTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR GCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTATCCAGATCAATGTCTaGCATGAATTTGGCATCGTG +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFIQINV*HEFGIV
Trigger: CACGATGCCAAATTCATGGCAGACATTGATCTGGAT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTITGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGCAATAACGGTGTTGTCGGCCAGGCCTTGACTAATTCCACAGGCAATTTGATAACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: SNNGVVGQALTNSTGNLITGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...TATCAAATTGCCTGTGGAATTAGTCAAGGCCTGGCCGACAACACCGTTATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR CCA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCATAGACTCTTTCCATaGCTTCACCCATTATGTGAG +
Preference number: 4 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEHRLFP*LHPLCE
Trigger: CTCACATAATGGGTGAAGCCATGGAAAGAGTCTATG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FKLFLSLIPYFDISKEFFAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...GAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GGTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTATTCTCGCCAGGACCTTaGCCGATGATCAAACATAAG +
Preference number: 4 (lower is better)
Translates to: GSWSIHLFIQYPAFELVVFSPGP*PMIKHK
Trigger: CTTATGTTTGATCATCGGCCAAGGTCCTGGCGAGAA...TACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCAACTGGAAATCCAGCTaGATGGTTGCACACTGGTGG +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVNWKSS*MVAHWW
Trigger: CCACCAGTGTGCAACCATCCAGCTGGATTTCCAGTT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTCGATGAACAATCACTaGCCTTTTCTTATCATCACC +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLSMNNH*PFLIIT
Trigger: GGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGA...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLCCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: ESLHICFAFPVRGGIFVYMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...ATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAATGGTGCGTTCCCCGTaGACCTTATTGTCTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKMVRSP*TLLSLV
Trigger: CACAAGAGACAATAAGGTCCACGGGGAACGCACCAT...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGCTTCACCCATTATGTaGGCACTAGAGTGCCAATAC +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVASPIM*ALECQY
Trigger: GTATTGGCACTCTAGTGCTCACATAATGGGTGAAGC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCTTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: YKVNFTETLFLLFHGANLFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGACAGCTCGTTCCTATaGAGTACCCCAAAATCAGCT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVDSSFL*STPKSA
Trigger: AGCTGATTTTGGGGTACTTCATAGGAACGAGCTGTC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGAGAGTCTCCATATCTaGTTTGCCTTCCCAGTACGT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKESLHI*FAFPVR
Trigger: ACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp ATCAGGCAAAGTGACTTTAATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: IRQSDFNWLAIFFCLFCQIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...CTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR GCA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCAATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp GGATTCAACTGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACATCATCATAGCCACTTaGAATGTCCCAATTAGAATT +
Preference number: 4 (lower is better)
Translates to: GFNCTTLCILTAVYHHSHIIIAT*NVPIRI
Trigger: AATTCTAATTGGGACATTGCAAGTGGCTATGATGAT...GTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCAGTTGAATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR CCA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYTGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
CDS-3UTR CCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: VNFTETLFLLFHGANLGNKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCGCTGTTGAAGATGTTTaGGGTGACTACCTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLAVEDV*GDYLLE
Trigger: TTCCAGGAGGTAGTCACCCCAAACATCTTCAACAGC...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCCCTCATCCTCAAACTTaGGAAGCTCCAAGGTACAAT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVPHPQT*EAPRYN
Trigger: ATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGG...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCATGGCACAGAATATGTaGGCATCATCCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKLFLSLIPYFDISKEFFMAQNM*ASSCWN
Trigger: ATTCCAACAGGATGATGCTCACATATTCTGTGCCAT...GAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR GCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTATTTCATCTTCAATCTaGTCCATGGCACAGAATATG +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFISSSI*SMAQNM
Trigger: CATATTCTGTGCCATGGAGCAGATTGAAGATGAAAT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAGCCTTGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: YLLCLPSTWRNFCVFLKPCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...AGGCTTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAAAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCGGGGTGACTACCTCCTaGAATCCTCTTTTCCTATAT +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLGVTTS*NPLFLY
Trigger: ATATAGGAAAAGAGGATTCCAGGAGGTAGTCACCCC...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp CACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACTTAAACATTGCCAGCTTCAATCTGCTCCATaGCACAGAATATGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HLFIQYPAFELVVLKHCQLQSAP*HRICEH
Trigger: ATGCTCACATATTCTGTGCCATGGAGCAGATTGAAG...CTGGCAATGTTTAAGTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GGTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACTGTATGTCAATCTTTaGGCCATAGAAAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GSWSIHLFIQYPAFELVVLYVNL*AIESSI
Trigger: GATGGAGCTTTCTATGGCCCAAAGATTGACATACAG...TACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCAATCTGATGGGCAACTaGAAATCCAGCTGGATGGTT +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLNLMGN*KSSWMV
Trigger: AACCATCCAGCTGGATTTCCAGTTGCCCATCAGATT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp ATCAGGCAAAGTGACTTTAATTGGCTTGCTATCTTTTTCTGCCTTTTCTGCCAGATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: IRQSDFNWLAIFFCLFCQMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...CTGGCAGAAAAGGCAGAAAAAGATAGCAAGCCAATTAAAGTCACTTTGCCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR TCA 90 bp TTGACTAATTCCACAGGCAATTTGATATGGTGTAGTTTTCCAAGATTCCGCATCATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: LTNSTGNLIWCSFPRFRIIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...GATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR TCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCATGGCACAGAATATGTaGGCATCATCCTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLMAQNM*ASSCWN
Trigger: ATTCCAACAGGATGATGCTCACATATTCTGTGCCAT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGATCAATGTCTGCCATaGATTTGGCATCGTGGAATT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKDQCLP*IWHRGI
Trigger: AATTCCACGATGCCAAATTCATGGCAGACATTGATC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp GTAGTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACGATCTGGGAATGAAATaGCATAAATTCTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VVGVFTFSFNIRHLNLLYDLGMK*HKFSGE
Trigger: CTCTCCAGAGAATTTATGGCATTTCATTCCCAGATC...GTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: NFTETLFLLFHGANLGNFTGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS-3UTR CCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTGTATGTCAATCTTTaGGCCATAGAAAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLLYVNL*AIESSI
Trigger: GATGGAGCTTTCTATGGCCCAAAGATTGACATACAG...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAATCGATGAACAATCACTaGCCTTTTCTTATCATCACC +
Preference number: 4 (lower is better)
Translates to: SISALPSQYVEEFLCIFKSMNNH*PFLIIT
Trigger: GGTGATGATAAGAAAAGGCCAGTGATTGTTCATCGA...TTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCATTCAATGTACAGCCTaGATCCAGATCAATGTCTGC +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVIQCTA*IQINVC
Trigger: GCAGACATTGATCTGGATCCAGGCTGTACATTGAAT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp CACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACTTAAACATTGCCAGATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: HLFIQYPAFELVVLKHCQIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...CTGGCAATGTTTAAGTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000509731.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCAGTTGTTTCTCAGCTTaGTCCCATACTTCGATATCT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVSCFSA*SHTSIS
Trigger: AGATATCGAAGTATGGGATCAAGCTGAGAAACAACT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCATAGTTCTTGGTCCCTaGCAATTTTCCTATGATCTC +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLIVLGP*QFSYDL
Trigger: GAGATCATAGGAAAATTGGCAGGGACCAAGAACTAT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR GCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAATTAAAATTCTTCTTCTaGCTGTTTGCTGCGGAACTC +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKLKFFF*LFAAEL
Trigger: GAGTTCCGCAGCAAACAGGCAGAAGAAGAATTTTAA...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAATGCCTTCCCAGTACGTaGAGGAATTTTTGTGTATTT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKCLPST*RNFCVF
Trigger: AAATACACAAAAATTCCTCCACGTACTGGGAAGGCA...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAATGTTGTCGTACCTTTTaGGCATATTCATCACAGGTT +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKCCRTF*AYSSQV
Trigger: AACCTGTGATGAATATGCCCAAAAGGTACGACAACA...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR TCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS-3UTR TCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCATTCCACAGGCAATTTaGTATGGTGTAGTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVIPQAI*YGVVFQ
Trigger: TTGGAAAACTACACCATATCAAATTGCCTGTGGAAT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS-3UTR TCA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCTTTAGGATCTGGGAATaGAATGCCATAAATTCTCTG +
Preference number: 4 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLFRIWE*NAINSL
Trigger: CAGAGAATTTATGGCATTTCATTCCCAGATCCTAAA...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CCA 90 bp TCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAAAAGAAATATAGTTCTTaGTCCCTGCCAATTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SISALPSQYVEEFLCIFKKKYSS*SLPIFL
Trigger: TAGGAAAATTGGCAGGGACCAAGAACTATATTTCTT...TTTAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCATGAATTTGGCATCGTaGAATTGTTGTCGTACCTTT +
Preference number: 4 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVMNLAS*NCCRTF
Trigger: AAAGGTACGACAACAATTCCACGATGCCAAATTCAT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
3UTR CAA 72 bp GTTGGAGTATTCACCTTTTCATTCAATATCCGGCATTaGAACTTGTTGTACTTAAACATTGCCAGTAAAGTT +
Preference number: 4 (lower is better)
Translates to: VGVFTFSFNIRH*NLLYLNIASKV
Trigger: AACTTTACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTGAATACTCCAAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CCA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTC +
Preference number: 4 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKTGNLI*CSFPRF
Trigger: GAATCTTGGAAAACTACACCATATCAAATTGCCTGT...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS CCA 90 bp AGAGGAGCCAAGAGGCGGGTGGGAGGTGGGCTAGCGCCCGGGACTTaGCCTCGGCTGGACCAGCTGATGCAATCGAAAGGCGCCCTAACC +
Preference number: 5 (lower is better)
Translates to: RGAKRRVGGGLAPGT*PRLDQLMQSKGALT
Trigger: GGTTAGGGCGCCTTTCGATTGCATCAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTCTTGGCTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502508.5
CDS TCA 90 bp AGGACTGCTGGCCTTCTCCTCAAACATTGGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACGGCCTACTCTCCGCTGACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: RTAGLLLKHWRTTKR*ENPKATAYSPLTLV
Trigger: GACCAAGGTCAGCGGAGAGTAGGCCGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCCAGCAGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS CCA 90 bp CTGTCTCTTACACATCAGCCTGTGAGGCCCTCAAAGTCGGGGAACTaGGCCCTATTCATCTTCCCACATGCACCGCCCAGATCAGTGCCG +
Preference number: 5 (lower is better)
Translates to: LSLTHQPVRPSKSGN*ALFIFPHAPPRSVP
Trigger: CGGCACTGATCTGGGCGGTGCATGTGGGAAGATGAATAGGGCCCAGTTCCCCGACTTTGAGGGCCTCACAGGCTGATGTGTAAGAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS TCA 90 bp AGGACTGCTGGCCTTCTCCTCAAACATTGGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACGGCCTTGGTCTGGACGCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RTAGLLLKHWRTTKR*ENPKATALVWTLSR
Trigger: TCTGGAAAGCGTCCAGACCAAGGCCGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCCAGCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514259.5
CDS-3UTR CAA 90 bp TCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGTACTTGCTGCGGAACTCTTaGAGCTGCTGTAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: SYPGESCECSRQLVPMKYLLRNS*SCCSRS
Trigger: CGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAA...GTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS GCA 90 bp GAGGCCCTCAAAGTCGGGGAACTGGGCCCTATTCATCTTCCCACATaGACCGCCCAGATCAGTGCCGGGCAAAATGTATACTTAACCACC +
Preference number: 5 (lower is better)
Translates to: EALKVGELGPIHLPT*TAQISAGQNVYLTT
Trigger: GGTGGTTAAGTATACATTTTGCCCGGCACTGATCTGGGCGGTGCATGTGGGAAGATGAATAGGGCCCAGTTCCCCGACTTTGAGGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS CCA 90 bp CACCAATCGGCTTCTCCTCGCCTCCCATCTTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTGGCGAACGACGAAGCGATGAGAGAA +
Preference number: 5 (lower is better)
Translates to: HQSASPRLPSSLKDC*PSPQTLANDEAMRE
Trigger: TTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGCGAGGAGAAGCCGATTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502508.5
ENST00000502553.5
ENST00000505012.5
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
ENST00000513066.3
ENST00000514259.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGCTAGCGCCCGGGACTaGGCCTCGGCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSASARD*ASAGPA
Trigger: AGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGC...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS TCA 90 bp CACAAAGCACTAGGGCTGTTTTCCTGTCTCTTACACATCAGCCTGTaGGGCCCTCAAAGTCGGGGAACTGGGCCCTATTCATCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: HKALGLFSCLLHISL*GPQSRGTGPYSSSH
Trigger: GTGGGAAGATGAATAGGGCCCAGTTCCCCGACTTTGAGGGCCTCACAGGCTGATGTGTAAGAGACAGGAAAACAGCCCTAGTGCTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS-3UTR CAA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTGCTAGCGCCCGGGACTaGGCCTCGGCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: NFTETLFLLFHGANLGNFASARD*ASAGPA
Trigger: AGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGC...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACAGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGT +
Preference number: 5 (lower is better)
Translates to: FARVSNMRTPAEIYQRATVSIIL*ESSYPG
Trigger: ACCCGGGTACGAAGATTCCAACAGGATGATGCTCAC...TGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS GCA 90 bp GGAACTGGGCCCTATTCATCTTCCCACATGCACCGCCCAGATCAGTaGCGGGCAAAATGTATACTTAACCACCCAAACTTGGACAAGCTG +
Preference number: 5 (lower is better)
Translates to: GTGPYSSSHMHRPDQ*RAKCILNHPNLDKL
Trigger: CAGCTTGTCCAAGTTTGGGTGGTTAAGTATACATTTTGCCCGGCACTGATCTGGGCGGTGCATGTGGGAAGATGAATAGGGCCCAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS-3UTR CAA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGTTGCTGCGGAACTCTTaGAGCTGCTGTAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: FLILKLEKLQGTIFFQRALLRNS*SCCSRS
Trigger: CGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAA...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS CCA 90 bp GCCCAGATCAGTGCCGGGCAAAATGTATACTTAACCACCCAAACTTaGACAAGCTGGGTCAGATCTCGGGCACTCGGTTTTCCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: AQISAGQNVYLTTQT*TSWVRSRALGFPFL
Trigger: AAGGAAAGGAAAACCGAGTGCCCGAGATCTGACCCAGCTTGTCCAAGTTTGGGTGGTTAAGTATACATTTTGCCCGGCACTGATCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS-3UTR CAA 90 bp TCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: SSYPGESCECSRQLVPMKREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...CTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGNPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACATTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FARVSNMRTPAEIYQRATFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...TGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGCTAGCGCCCGGGACTaGGCCTCGGCTGGACCAGCT +
Preference number: 5 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKASARD*ASAGPA
Trigger: AGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000508361.5
CDS-3UTR CAA 90 bp CTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: LWRVSISALPSQYVEEFLVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...CAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 5 (lower is better)
Translates to: VNFTETLFLLFHGANLGNNPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGTACTTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: SYPGESCECSRQLVPMKYLLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...GTACTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTA +
Preference number: 5 (lower is better)
Translates to: YVSIILLESSYPGESCECSPWTL*SLVRIL
Trigger: TAATATCCGCACAAGAGACAATAAGGTCCACGGGGA...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTGCTGCGGAACTCTTaGAGCTGCTGTAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: VNFTETLFLLFHGANLGNLLRNS*SCCSRS
Trigger: CGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAA...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATTTGCTGCGGAACTCTTaGAGCTGCTGTAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYLLRNS*SCCSRS
Trigger: CGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAA...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS TCA 90 bp CTCTGCCATAGAGACAGTACCATTGGGCTTTCACGCAAAGCCATGTaGGCAGTGACGGCCTATCCTCTTTTTGTAGACGCAGAAGTTACA +
Preference number: 5 (lower is better)
Translates to: LCHRDSTIGLSRKAM*AVTAYPLFVDAEVT
Trigger: TGTAACTTCTGCGTCTACAAAAAGAGGATAGGCCGTCACTGCTCACATGGCTTTGCGTGAAAGCCCAATGGTACTGTCTCTATGGCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509410.1
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGCCTTCTCCTCAAACATaGGCGAACGACGAAGCGATG +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGPSPQT*ANDEAM
Trigger: CATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGG...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TGGCCCGAGGTCATCCAGAGTCGGCTGTTGAAGATGTTTGGGGTGACTACCTCCAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: WPEVIQSRLLKMFGVTTSNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...GGAGGTAGTCACCCCAAACATCTTCAACAGCCGACTCTGGATGACCTCGGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000509731.5
CDS-3UTR CAA 90 bp GTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATTTTTCCGGGCGAGGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGT +
Preference number: 5 (lower is better)
Translates to: VSQLDPILRYLQGIFPGEVSIIL*ESSYPG
Trigger: ACCCGGGTACGAAGATTCCAACAGGATGATGCTCAC...CTCGCCCGGAAAAATTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGCTCGTTCCTATGAAGAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: SSYPGESCECSRQLVPMKKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...CTTCATAGGAACGAGCTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTTGCCCGTGTGTCTAACATGAGGACCCCGGCAGAGATCTATCAAAGGGCCACATCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FARVSNMRTPAEIYQRATSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...TGTGGCCCTTTGATAGATCTCTGCCGGGGTCCTCATGTTAGACACACGGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 5 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSNPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCTCCAGACAGTTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: IILLESSYPGESCECSRQLLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...CTGTCTGGAGCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMENPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ATATGGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTAATCCAGCTGGATGGTaGCACACTGGTGGTACCGCC +
Preference number: 5 (lower is better)
Translates to: IWCSFPRFRINLFTIRQSNPAGW*HTGGTA
Trigger: GGCGGTACCACCAGTGTGCAACCATCCAGCTGGATT...ACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp TGGATGGTTGCACACTGGTGGTACCGCCCAATCGCATCTTTAATCTGTATGTCATTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: WMVAHWWYRPIASLICMSFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...TGACATACAGATTAAAGATGCGATTGGGCGGTACCACCAGTGTGCAACCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTTTGCTGCGGAACTCTTaGAGCTGCTGTAGCCGCTCG +
Preference number: 5 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFLLRNS*SCCSRS
Trigger: CGAGCGGCTACAGCAGCTCAAAGAGTTCCGCAGCAA...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TCCCCGTGGACCTTATTGTCTCTTGTGCGGATATTAACAGTGCCACTGATTTTCTCTTCTTCTGCCTGTTaGCTGCGGAACTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: SPWTLLSLVRILTVPLIFSSSAC*LRNSLS
Trigger: GCTCAAAGAGTTCCGCAGCAAACAGGCAGAAGAAGA...GAAAATCAGTGGCACTGTTAATATCCGCACAAGAGACAATAAGGTCCACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTTGTCGGCCAGGCCTaGAAGGAAGAAAAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSVVGQA*KEEKRR
Trigger: CCTCCTCTTTTCTTCCTTCAAGGCCTGGCCGACAAC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000455217.6
CDS-3UTR CAA 90 bp CTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGTTAGCAATAACGGTGTaGTCGGCCAGGCCTAATTCC +
Preference number: 5 (lower is better)
Translates to: LSFLILKLEKLQGTIFFQLAITV*SARPNS
Trigger: GGAATTAGGCCTGGCCGACAACACCGTTATTGCTAA...CTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505012.5
CDS-3UTR CAA 90 bp TATGTGAGCATCATCCTGTTGGAATCTTCGTACCCGGGTGAGTCCTGTGAGTGCCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: YVSIILLESSYPGESCECRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...GCACTCACAGGACTCACCCGGGTACGAAGATTCCAACAGGATGATGCTCACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAAGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGT +
Preference number: 5 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSVSIIL*ESSYPG
Trigger: ACCCGGGTACGAAGATTCCAACAGGATGATGCTCAC...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGGGCATCGTGGAATTGTaGTCGTACCTTTTGGGCATA +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGGIVEL*SYLLGI
Trigger: TATGCCCAAAAGGTACGACAACAATTCCACGATGCC...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ATTCTCTGGAGAGTCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTGGCATCGTGGAATTGTaGTCGTACCTTTTGGGCATA +
Preference number: 5 (lower is better)
Translates to: ILWRVSISALPSQYVEEFGIVEL*SYLLGI
Trigger: TATGCCCAAAAGGTACGACAACAATTCCACGATGCC...AAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGACTCTCCAGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTA +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGSPWTL*SLVRIL
Trigger: TAATATCCGCACAAGAGACAATAAGGTCCACGGGGA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTA +
Preference number: 5 (lower is better)
Translates to: CLSFLILKLEKLQGTIFFSPWTL*SLVRIL
Trigger: TAATATCCGCACAAGAGACAATAAGGTCCACGGGGA...GAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGTACTCTCCGCTGACCTaGGTCTGGACGCTTTCCAGA +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEYSPLT*VWTLSR
Trigger: TCTGGAAAGCGTCCAGACCAAGGTCAGCGGAGAGTA...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS CCA 90 bp ATAACGGTGTTGTCGGCCAGGCCTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGG +
Preference number: 5 (lower is better)
Translates to: ITVLSARPNSTGNLI*CSFPRFRINLFTIR
Trigger: CCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGGCCTGGCCGACAACACCGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505012.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCTTCTCCTCAAACATaGGCGAACGACGAAGCGATG +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEPSPQT*ANDEAM
Trigger: CATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TGTCGTACCTTTTGGGCATATTCATCACAGGTTGGTCCCACTGGAACTACCATTAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: CRTFWAYSSQVGPTGTTIREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...AATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGTACGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: VVFQDSASTCLPSGKVTLVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...TAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp AGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAATTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: RVPIHCLSFLILKLEKLQLLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...TTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTGGCATCGTGGAATTGTaGTCGTACCTTTTGGGCATA +
Preference number: 5 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVGIVEL*SYLLGI
Trigger: TATGCCCAAAAGGTACGACAACAATTCCACGATGCC...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATGGCATCGTGGAATTGTaGTCGTACCTTTTGGGCATA +
Preference number: 5 (lower is better)
Translates to: VNFTETLFLLFHGANLGNGIVEL*SYLLGI
Trigger: TATGCCCAAAAGGTACGACAACAATTCCACGATGCC...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTTTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: VNFTETLFLLFHGANLGNFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCTCTTCTTCTGCCTGTTaGCTGCGGAACTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSSSSAC*LRNSLS
Trigger: GCTCAAAGAGTTCCGCAGCAAACAGGCAGAAGAAGA...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSSYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQSYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSSYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: VNFTETLFLLFHGANLGNREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...ATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCCAGAGGGCGATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 5 (lower is better)
Translates to: FLILKLEKLQGTIFFQRAIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...CGCCCTCTGGAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAAGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGT +
Preference number: 5 (lower is better)
Translates to: TVFKLFLSLIPYFDISKEVSIIL*ESSYPG
Trigger: ACCCGGGTACGAAGATTCCAACAGGATGATGCTCAC...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AACTGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACTTGCAAGGCATCGTGGAATTGTaGTCGTACCTTTTGGGCATA +
Preference number: 5 (lower is better)
Translates to: NCTTLCILTAVYHHSHLQGIVEL*SYLLGI
Trigger: TATGCCCAAAAGGTACGACAACAATTCCACGATGCC...TTGCAAGTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp TGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAGGTACAATCTTCTTCATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: CLSFLILKLEKLQGTIFFMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...GAAGAAGATTGTACCTTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCTCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTA +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSSPWTL*SLVRIL
Trigger: TAATATCCGCACAAGAGACAATAAGGTCCACGGGGA...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCCCCGTGGACCTTATaGTCTCTTGTGCGGATATTA +
Preference number: 5 (lower is better)
Translates to: RVQSQFYGNAVPPFPWSQSPWTL*SLVRIL
Trigger: TAATATCCGCACAAGAGACAATAAGGTCCACGGGGA...TTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGAGTTACGCCTGCAGGTaGACCTATTCAGACTTTGCC +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMESYACR*TYSDFA
Trigger: GGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACT...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AGAGTGCCAATACACTGCCTGAGCTTCCTCATCCTCAAACTTGAGAAGCTCCAAAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RVPIHCLSFLILKLEKLQNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...TTGGAGCTTCTCAAGTTTGAGGATGAGGAAGCTCAGGCAGTGTATTGGCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505012.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTTTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ACTGTTTTCAAGTTGTTTCTCAGCTTGATCCCATACTTCGATATCTCCAAGGAATCTTCTTCTGCCTGTTaGCTGCGGAACTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: TVFKLFLSLIPYFDISKESSSAC*LRNSLS
Trigger: GCTCAAAGAGTTCCGCAGCAAACAGGCAGAAGAAGA...TTCCTTGGAGATATCGAAGTATGGGATCAAGCTGAGAAACAACTTGAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000508361.5
CDS CCA 90 bp GTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTaGAATTGTTGTCGTACCTATTGTAACAGAGATACAGAATTTGTC +
Preference number: 5 (lower is better)
Translates to: VQPGSRSMSAMNLAS*NCCRTYCNRDTEFV
Trigger: GACAAATTCTGTATCTCTGTTACAATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS-3UTR CAA 90 bp CAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: QSQFYGNAVPPFPWSQSGNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...CCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS-3UTR CAA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTCCATATCTGCTTaGCCTTCCCAGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKVSISA*PSQYVE
Trigger: CTCCACGTACTGGGAAGGCAAAGCAGATATGGAGAC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTGAGCATCATCCTGTaGGAATCTTCGTACCCGGGT +
Preference number: 5 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKVSIIL*ESSYPG
Trigger: ACCCGGGTACGAAGATTCCAACAGGATGATGCTCAC...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: NSYACRLTYSDFAKLLQVKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...AACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GGATTCAACTGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: GFNCTTLCILTAVYHHSHKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...GTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCAGTTGAATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGTCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: YKVNFTETLFLLFHGANLSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCATCATCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: AMNLASWNCCRTFWAYSSSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...TGATGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACTTGCAATGTTCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: CTTLCILTAVYHHSHLQCSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...ACATTGCAAGTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp GTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: VQSQFYGNAVPPFPWSQSMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...AGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAAGTTCAATATAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YACRLTYSDFAKLLQVQYNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...ATATTGAACTTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
CDS-3UTR CAA 90 bp AAAAATAGTTACGCCTGCAGGTTGACCTATTCAGACTTTGCCAAACTCCTCCAACGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: KNSYACRLTYSDFAKLLQRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...TTGGAGGAGTTTGGCAAAGTCTGAATAGGTCAACCTGCAGGCGTAACTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TCTGCCATGAATTTGGCATCGTGGAATTGTTGTCGTACCTTTTGGGCATATTCACGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SAMNLASWNCCRTFWAYSRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...TGAATATGCCCAAAAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 5 (lower is better)
Translates to: FRVQSQFYGNAVPPFPWSIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...GCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TGCACCACCCTCTGTATCTTAACTGCAGTTTATCATCATAGCCACTTGCAATGTATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 5 (lower is better)
Translates to: CTTLCILTAVYHHSHLQCIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...ACATTGCAAGTGGCTATGATGATAAACTGCAGTTAAGATACAGAGGGTGGTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp TACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: YKVNFTETLFLLFHGANLKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...CAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGTTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMELLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMEMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTCTTCTTCTGCCTGTTaGCTGCGGAACTCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVSSSAC*LRNSLS
Trigger: GCTCAAAGAGTTCCGCAGCAAACAGGCAGAAGAAGA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS TCA 90 bp TCTTTTTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATaGATTTGGCATCGTGGAATTGTTGTCGTACCTATTGTAACAGAG +
Preference number: 5 (lower is better)
Translates to: SFYSMYSLDPDQCLP*IWHRGIVVVPIVTE
Trigger: CTCTGTTACAATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS-3UTR CAA 90 bp CACCTTTTCATTCAATATCCGGCATTTGAACTTGTTGTACTTAAACATTGCCAGAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: HLFIQYPAFELVVLKHCQREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...CTGGCAATGTTTAAGTACAACAAGTTCAAATGCCGGATATTGAATGAAAAGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
CDS-3UTR CAA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: FQSTKSILRKRCSSFSMERHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...CTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 5 (lower is better)
Translates to: NFTETLFLLFHGANLGNFIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp ATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTTATCCGGCATTTGAACTaGTTGTACTTAAACATTGCC +
Preference number: 5 (lower is better)
Translates to: ILRKRCSSFSMEPIWVIFIRHLN*LYLNIA
Trigger: GGCAATGTTTAAGTACAACAAGTTCAAATGCCGGAT...AAAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp AATTTTACGGAAACGCTGTTCCTCCTTTTCCATGGAGCCAATCTGGGTAATTTTAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: NFTETLFLLFHGANLGNFKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...AAAATTACCCAGATTGGCTCCATGGAAAAGGAGGAACAGCGTTTCCGTAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTTTGGCATCGTGGAATaGTTGTCGTACCTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVFGIVE*LSYLLG
Trigger: GCCCAAAAGGTACGACAACAATTCCACGATGCCAAA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTGACTAATTCCACAGGCAATTTGATATGGTGTAGTTTTCCAAGATTCCGCATCATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGT +
Preference number: 5 (lower is better)
Translates to: LTNSTGNLIWCSFPRFRIMSAMN*ASWNCC
Trigger: ACAACAATTCCACGATGCCAAATTCATGGCAGACAT...GATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509731.5
CDS-3UTR CAA 90 bp GTAGTTTTCCAAGATTCCGCATCAACCTGTTTACCATCAGGCAAAGTGACTTTAAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VVFQDSASTCLPSGKVTLNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...TAAAGTCACTTTGCCTGATGGTAAACAGGTTGATGCGGAATCTTGGAAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509731.5
ENST00000513066.3
CDS-3UTR CAA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCAGAGAAGAGAAATCATaGCTAGACACACCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVREEKS*LDTPPS
Trigger: AGAAGGGGGTGTGTCTAGCAATGATTTCTCTTCTCT...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TCTCCATATCTGCTTTGCCTTCCCAGTACGTGGAGGAATTTTTGTGTATTTTTAAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SPYLLCLPSTWRNFCVFLNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...TAAAAATACACAAAAATTCCTCCACGTACTGGGAAGGCAAAGCAGATATGGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000507716.5
ENST00000509731.5
CDS-3UTR CAA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTCTGTATGTCAATCTTaGGGCCATAGAAAGCTCCAT +
Preference number: 5 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVSVCQS*GHRKLH
Trigger: ATGGAGCTTTCTATGGCCCAAAGATTGACATACAGA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAGTCTTGTTGTCGTACCTTTaGGGCATATTCATCACAGGT +
Preference number: 5 (lower is better)
Translates to: FAKLLQVQYKLTFSEYKVLLSYL*GIFITG
Trigger: ACCTGTGATGAATATGCCCAAAAGGTACGACAACAA...GACTTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCCGGCATTTGAACTTGTaGTACTTAAACATTGCCAGT +
Preference number: 5 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLRHLNL*YLNIAS
Trigger: ACTGGCAATGTTTAAGTACAACAAGTTCAAATGCCG...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp GACTTTGCCAAACTCCTCCAAGTTCAATATAAATTGACGTTTTCAGAGTACAAAAAGTTGTTTCTCAGCTaGATCCCATACTTCGATATC +
Preference number: 5 (lower is better)
Translates to: DFAKLLQVQYKLTFSEYKKLFLS*IPYFDI
Trigger: GATATCGAAGTATGGGATCAAGCTGAGAAACAACTT...TTTGTACTCTGAAAACGTCAATTTATATTGAACTTGGAGGAGTTTGGCAAAGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
ENST00000508361.5
CDS-3UTR CAA 90 bp TATAAATTGACGTTTTCAGAGTACAAAGTCAATTTTACGGAAACGCTGTTCCTCAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: YKLTFSEYKVNFTETLFLNSTGN*IWCSFP
Trigger: TGGAAAACTACACCATATCAAATTGCCTGTGGAATT...GAGGAACAGCGTTTCCGTAAAATTGACTTTGTACTCTGAAAACGTCAATTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502553.5
ENST00000507716.5
CDS CAA 90 bp GAGAGGAGCCAAGAGGCGGGTGGGAGGTGGGCTAGCGCCCGGGACTaGGCCTCGGCTGGACCAGCTGATGCAATCGAAAGGCGCCCTAAC +
Preference number: 6 (lower is better)
Translates to: ERSQEAGGRWASARD*ASAGPADAIERRPN
Trigger: GTTAGGGCGCCTTTCGATTGCATCAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTCTTGGCTCCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502508.5
CDS CCA 72 bp AAGAGGCGGGTGGGAGGTGGGCTAGCGCCCGGGACTTaGCCTCGGCTGGACCAGCTGATGCAATCGAAAGGC +
Preference number: 6 (lower is better)
Translates to: KRRVGGGLAPGT*PRLDQLMQSKG
Trigger: GCCTTTCGATTGCATCAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502508.5
CDS CAA 72 bp CAAGAGGCGGGTGGGAGGTGGGCTAGCGCCCGGGACTaGGCCTCGGCTGGACCAGCTGATGCAATCGAAAGG +
Preference number: 6 (lower is better)
Translates to: QEAGGRWASARD*ASAGPADAIER
Trigger: CCTTTCGATTGCATCAGCTGGTCCAGCCGAGGCCAAGTCCCGGGCGCTAGCCCACCTCCCACCCGCCTCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502508.5
CDS CCA 72 bp CCGAAAGCGACGGCCTACTCTCCGCTGACCTTGGTCTaGACGCTTTCCAGAGTCAAGTCCCCAATGCGCGTG +
Preference number: 6 (lower is better)
Translates to: PKATAYSPLTLV*TLSRVKSPMRV
Trigger: CACGCGCATTGGGGACTTGACTCTGGAAAGCGTCCAGACCAAGGTCAGCGGAGAGTAGGCCGTCGCTTTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS TCA 72 bp GGCCTTCTCCTCAAACATTGGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACGGCCTACTCTCCGCTG +
Preference number: 6 (lower is better)
Translates to: GLLLKHWRTTKR*ENPKATAYSPL
Trigger: CAGCGGAGAGTAGGCCGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS TCA 72 bp GGCCTTCTCCTCAAACATTGGCGAACGACGAAGCGATaGGAGAACCCGAAAGCGACGGCCTTGGTCTGGACG +
Preference number: 6 (lower is better)
Translates to: GLLLKHWRTTKR*ENPKATALVWT
Trigger: CGTCCAGACCAAGGCCGTCGCTTTCGGGTTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514259.5
CDS CCA 72 bp GCTTCTCCTCGCCTCCCATCTTCCCTGAAGGACTGCTaGCCTTCTCCTCAAACATTGGCGAACGACGAAGCG +
Preference number: 6 (lower is better)
Translates to: ASPRLPSSLKDC*PSPQTLANDEA
Trigger: CGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGATGGGAGGCGAGGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502508.5
ENST00000502553.5
ENST00000505012.5
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
ENST00000513066.3
ENST00000514259.5
CDS CCA 72 bp ACACATCAGCCTGTGAGGCCCTCAAAGTCGGGGAACTaGGCCCTATTCATCTTCCCACATGCACCGCCCAGA +
Preference number: 6 (lower is better)
Translates to: THQPVRPSKSGN*ALFIFPHAPPR
Trigger: TCTGGGCGGTGCATGTGGGAAGATGAATAGGGCCCAGTTCCCCGACTTTGAGGGCCTCACAGGCTGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS CAA 72 bp GAGAACCCGAAAGCGACGGCCTACTCTCCGCTGACCTaGGTCTGGACGCTTTCCAGAGTCAAGTCCCCAATG +
Preference number: 6 (lower is better)
Translates to: ENPKATAYSPLT*VWTLSRVKSPM
Trigger: CATTGGGGACTTGACTCTGGAAAGCGTCCAGACCAAGGTCAGCGGAGAGTAGGCCGTCGCTTTCGGGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502553.5
CDS TCA 72 bp CCTCCCTCCTCTAAGCCAGTGGAAAATCTTTTCGGGTaGCAGAGCCCTTCTAGGAAATCAGGTCGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: PPSSKPVENLFG*QSPSRKSGRGG
Trigger: CCCTCCGCGACCTGATTTCCTAGAAGGGCTCTGTCACCCGAAAAGATTTTCCACTGGCTTAGAGGAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502508.5
CDS CAA 72 bp TCTTCCCTGAAGGACTGCTGGCCTTCTCCTCAAACATaGGCGAACGACGAAGCGATGAGAGAACCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: SSLKDCWPSPQT*ANDEAMREPES
Trigger: GCTTTCGGGTTCTCTCATCGCTTCGTCGTTCGCCAATGTTTGAGGAGAAGGCCAGCAGTCCTTCAGGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265112.8
ENST00000455217.6
ENST00000502508.5
ENST00000502553.5
ENST00000505012.5
ENST00000507716.5
ENST00000508361.5
ENST00000509731.5
ENST00000513066.3
ENST00000514259.5
CDS TCA 72 bp AGAGACAGTACCATTGGGCTTTCACGCAAAGCCATGTaGGCAGTGACGGCCTATCCTCTTTTTGTAGACGCA +
Preference number: 6 (lower is better)
Translates to: RDSTIGLSRKAM*AVTAYPLFVDA
Trigger: TGCGTCTACAAAAAGAGGATAGGCCGTCACTGCTCACATGGCTTTGCGTGAAAGCCCAATGGTACTGTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509410.1
CDS GCA 72 bp GAAAGTTGGAGGACGCTGGTGTTCCTTCCTCATCTCTaGCATAGAGACAGTACCATTGGGCTTTCACGCAAA +
Preference number: 6 (lower is better)
Translates to: ESWRTLVFLPHL*HRDSTIGLSRK
Trigger: TTTGCGTGAAAGCCCAATGGTACTGTCTCTATGGCAGAGATGAGGAAGGAACACCAGCGTCCTCCAACTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509410.1
CDS CCA 72 bp ATCCTTTTGGGCATATTCATCACAGGTTGGTCCCACTaGAACTACCATTACCTGGCGAGGGGACAGCCAAAA +
Preference number: 6 (lower is better)
Translates to: ILLGIFITGWSH*NYHYLARGQPK
Trigger: TTTTGGCTGTCCCCTCGCCAGGTAATGGTAGTTCCAGTGGGACCAACCTGTGATGAATATGCCCAAAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509410.1
CDS CAA 72 bp ACGGTGTTGTCGGCCAGGCCTAATTCCACAGGCAATTaGATATGGTGTAGTTTTCCAAGATTCCGCATCAAC +
Preference number: 6 (lower is better)
Translates to: TVLSARPNSTGN*IWCSFPRFRIN
Trigger: GTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGGCCTGGCCGACAACACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505012.5
CDS TCA 72 bp AATGGAGCTCTTTACCCCCGCAGGATCTTAGGAGATTaGTTAAATAAGGCTCTGCAATGTGTTTCCCGCTTA +
Preference number: 6 (lower is better)
Translates to: NGALYPRRILGD*LNKALQCVSRL
Trigger: TAAGCGGGAAACACATTGCAGAGCCTTATTTAATCAATCTCCTAAGATCCTGCGGGGGTAAAGAGCTCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506040.1
CDS CCA 72 bp TTGTCGGCCAGGCCTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: LSARPNSTGNLI*CSFPRFRINLF
Trigger: AAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGGCCTGGCCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505012.5
CDS CAA 72 bp GTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGTCGTACCTATTGTAAC +
Preference number: 6 (lower is better)
Translates to: VQPGSRSMSAMN*ASWNCCRTYCN
Trigger: GTTACAATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS TCA 72 bp TCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATaGATTTGGCATCGTGGAATTGTTGTCGTACCTATT +
Preference number: 6 (lower is better)
Translates to: SMYSLDPDQCLP*IWHRGIVVVPI
Trigger: AATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS CCA 72 bp GGAAGCTGTGTGACTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: GSCVTNSTGNLI*CSFPRFRINLF
Trigger: AAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGTCACACAGCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455217.6
CDS CCA 72 bp GGATCCAGATCAATGTCTGCCATGAATTTGGCATCGTaGAATTGTTGTCGTACCTATTGTAACAGAGATACA +
Preference number: 6 (lower is better)
Translates to: GSRSMSAMNLAS*NCCRTYCNRDT
Trigger: TGTATCTCTGTTACAATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS CAA 72 bp TCCCACACAACATTATTTACTTTAGCAATAACGGTGTaGTCGGCCAGGCCTAATTCCACAGGCAATTTGATA +
Preference number: 6 (lower is better)
Translates to: SHTTLFTLAITV*SARPNSTGNLI
Trigger: TATCAAATTGCCTGTGGAATTAGGCCTGGCCGACAACACCGTTATTGCTAAAGTAAATAATGTTGTGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505012.5
CDS CAA 90 bp TTATTCAATGTACAGCCTGGATCCAGATCAATGTCTGCCATGAATTaGGCATCGTGGAATTGTTGTCGTACCTATTGTAACAGAGATACA +
Preference number: 6 (lower is better)
Translates to: LFNVQPGSRSMSAMN*ASWNCCRTYCNRDT
Trigger: TGTATCTCTGTTACAATAGGTACGACAACAATTCCACGATGCCAAATTCATGGCAGACATTGATCTGGATCCAGGCTGTACATTGAATAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503422.1
CDS CCA 72 bp ACTCTTTCCATGGCTAATTCCACAGGCAATTTGATATaGTGTAGTTTTCCAAGATTCCGCATCAACCTGTTT +
Preference number: 6 (lower is better)
Translates to: TLSMANSTGNLI*CSFPRFRINLF
Trigger: AAACAGGTTGATGCGGAATCTTGGAAAACTACACCATATCAAATTGCCTGTGGAATTAGCCATGGAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507716.5