RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAOK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000135090

Ensembl transcript IDs: ENST00000392533.8, ENST00000419821.6, ENST00000536584.1, ENST00000536979.1, ENST00000537305.5, ENST00000537569.1, ENST00000537822.1, ENST00000537952.1, ENST00000539872.5, ENST00000540561.5, ENST00000541186.5, ENST00000541878.5, ENST00000542532.5, ENST00000542692.1, ENST00000543709.5

Found 404 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTaGGATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACA +
Preference number: 1 (lower is better)
Translates to: SIHKIHDLPKPNLCY*DSVSSLSVFTSSAT
Trigger: TGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR GCA 90 bp ATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTaGTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCT +
Preference number: 1 (lower is better)
Translates to: IPSIHKIHDLPKPNL*YWDSVSSLSVFTSS
Trigger: AGAGGATGTGAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR GCA 90 bp ATGATTATGATACAATCAGAATATGCTGAAGACAAGTTAAACTCTTaGCAGCAGGTTCTTAAAAATCACAAGATCTCTTCACCCCACCCA +
Preference number: 1 (lower is better)
Translates to: MIMIQSEYAEDKLNS*QQVLKNHKISSPHP
Trigger: TGGGTGGGGTGAAGAGATCTTGTGATTTTTAAGAACCTGCTGGCAAGAGTTTAACTTGTCTTCAGCATATTCTGATTGTATCATAATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGAGGAAGGGGGCCCCTaGTGGAGTAAGAATAAACAG +
Preference number: 2 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVEEGGP*WSKNKQ
Trigger: CTGTTTATTCTTACTCCATCAGGGGCCCCCTTCCTC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCAACGCCCGTTAAAATaGGGAATGTGGTTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFQRPLK*GMWFCR
Trigger: CCTGCAAAACCACATTCCCCATTTTAACGGGCGTTG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGAGACGGCCAGGTTTTaGCCAGCACTGAAAGTTGAC +
Preference number: 2 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVETARF*PALKVD
Trigger: GTCAACTTTCAGTGCTGGCCAAAACCTGGCCGTCTC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGAGACGGCCAGGTTTTaGCCAGCACTGAAAGTTGAC +
Preference number: 2 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIETARF*PALKVD
Trigger: GTCAACTTTCAGTGCTGGCCAAAACCTGGCCGTCTC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCAACGCCCGTTAAAATaGGGAATGTGGTTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVQRPLK*GMWFCR
Trigger: CCTGCAAAACCACATTCCCCATTTTAACGGGCGTTG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGAGGAAGGGGGCCCCTaGTGGAGTAAGAATAAACAG +
Preference number: 2 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVEEGGP*WSKNKQ
Trigger: CTGTTTATTCTTACTCCATCAGGGGCCCCCTTCCTC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGACAAGTTAAACTCTTaGCAGCAGGTTCTTAAAAAT +
Preference number: 2 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFDKLNS*QQVLKN
Trigger: ATTTTTAAGAACCTGCTGGCAAGAGTTTAACTTGTC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGTGGTAATGAGTGATTaGTTAAAGCAATATACATCC +
Preference number: 2 (lower is better)
Translates to: DSVSSLSVFTSSATAENDVVMSD*LKQYTS
Trigger: GGATGTATATTGCTTTAAGCAATCACTCATTACCAC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGTGGTAATGAGTGATTaGTTAAAGCAATATACATCC +
Preference number: 2 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVVVMSD*LKQYTS
Trigger: GGATGTATATTGCTTTAAGCAATCACTCATTACCAC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGTAAGGCTGCGGATATaGTGTCTCTCTCCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVVRLRI*CLSPPW
Trigger: CCAAGGGGGAGAGAGACACAATATCCGCAGCCTTAC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR TCA 72 bp CGACACGATGTCAGTAAGAGTAAGAGAGAGAGAGAGTaGGAGCAACGCCCGTTAAAATGGGGAATGTGGTTT +
Preference number: 3 (lower is better)
Translates to: RHDVSKSKRERE*EQRPLKWGMWF
Trigger: AAACCACATTCCCCATTTTAACGGGCGTTGCTCTCACTCTCTCTCTCTCTTACTCTTACTGACATCGTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGTAAGGCTGCGGATATaGTGTCTCTCTCCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: SVSSLSVFTSSATAENDYVRLRI*CLSPPW
Trigger: CCAAGGGGGAGAGAGACACAATATCCGCAGCCTTAC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR CCA 72 bp AAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTaGGATTCTGTGAGCTCCTTAAGTGTATTCACATCC +
Preference number: 3 (lower is better)
Translates to: KIHDLPKPNLCY*DSVSSLSVFTS
Trigger: GGATGTGAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCTTTACTTTCACAGATaGGTGGTAATGAGTGATTGC +
Preference number: 3 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLYFHR*VVMSDC
Trigger: GCAATCACTCATTACCACCAATCTGTGAAAGTAAAG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR TCA 72 bp GAAAAAGATCAAGATGATCTGATTGAGAGACAGTGTTaGACTCCAAATACTGAACTGGAAAAGGAGGGAGGT +
Preference number: 3 (lower is better)
Translates to: EKDQDDLIERQC*TPNTELEKEGG
Trigger: ACCTCCCTCCTTTTCCAGTTCAGTATTTGGAGTTCAACACTGTCTCTCAATCAGATCATCTTGATCTTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCTTTACTTTCACAGATaGGTGGTAATGAGTGATTGC +
Preference number: 3 (lower is better)
Translates to: CKAADIVSLSPLAFIIIILYFHR*VVMSDC
Trigger: GCAATCACTCATTACCACCAATCTGTGAAAGTAAAG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR GCA 72 bp ATACAATCAGAATATGCTGAAGACAAGTTAAACTCTTaGCAGCAGGTTCTTAAAAATCACAAGATCTCTTCA +
Preference number: 3 (lower is better)
Translates to: IQSEYAEDKLNS*QQVLKNHKISS
Trigger: TGAAGAGATCTTGTGATTTTTAAGAACCTGCTGGCAAGAGTTTAACTTGTCTTCAGCATATTCTGATTGTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGGTCCGGTCGCTGAGTaGCGGATCCGGCTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFGPVAE*RIRLCA
Trigger: TGCGCACAGCCGGATCCGGCACTCAGCGACCGGACC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTCGCGGTCTCGGCGTTaGGTCCCACTCTCCACGCAG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSRSRR*VPLSTQ
Trigger: CTGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGGCCTGGGATCGCCGTaGCCCGCCTCATCCCTTATG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFGLGSP*PASSLM
Trigger: CATAAGGGATGAGGCGGGCCACGGCGATCCCAGGCC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCTTGGGTCCGGTCGCTaGGTGCCGGATCCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLGSGR*VPDPAV
Trigger: CACAGCCGGATCCGGCACTCAGCGACCGGACCCAAG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGGCCTGGCTCTGAACTaGCTGGGTAGGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVGLALN*LGRPRL
Trigger: GAGCCGCGGCCTACCCAGTCAGTTCAGAGCCAGGCC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTGCCGGATCCGGCTGTaGGCAGCCTCTGCTCGCGGT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVCRIRL*AASARG
Trigger: ACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGCTGTGCGCAGCCTCTaGTCGCGGTCTCGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIAVRSL*SRSRRC
Trigger: GCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCGGGTGGACTCGTCGTaGCGGATTAGCATGGCATGC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFRVDSS*RISMAC
Trigger: GCATGCCATGCTAATCCGGCACGACGAGTCCACCCG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGGCCTGGGATCGCCGTaGCCCGCCTCATCCCTTATG +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVGLGSP*PASSLM
Trigger: CATAAGGGATGAGGCGGGCCACGGCGATCCCAGGCC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGCACCCCTTTACGCATaGTGGCCAGTAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFAPLYA*WPVEQA
Trigger: AGCCTGCTCTACTGGCCATCATGCGTAAAGGGGTGC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCCTCCTTCTGTAGCTTaGGGCGGTGCTCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFPPSVA*GGARPS
Trigger: AGATGGACGAGCACCGCCTCAAGCTACAGAAGGAGG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGGCCTGGCTCTGAACTaGCTGGGTAGGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVGLALN*LGRPRL
Trigger: GAGCCGCGGCCTACCCAGTCAGTTCAGAGCCAGGCC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCGCTGCGTTCCTTCTaGAGGGCAGCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSLRSF*RAASSS
Trigger: AGAGGAGCTGGCTGCCCTTCAGAAGGAACGCAGCGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCACTGCTGCTCTGGCTaGCTGTGCTCACGGACATGC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDHCCSG*LCSRTC
Trigger: GCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGTG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCGGGTGGACTCGTCGTaGCGGATTAGCATGGCATGC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVRVDSS*RISMAC
Trigger: GCATGCCATGCTAATCCGGCACGACGAGTCCACCCG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTCCCCGGCGGATCCTTaGGTCCGGTCGCTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSPADP*VRSLSA
Trigger: GGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCGGACATGCTTGGAATaGAATGGTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFRTCLE*NGCCPG
Trigger: GCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCACTCTAGCTCTCGGGTaGACTCGTCGTGCCGGATTA +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFTLALG*TRRAGL
Trigger: TAATCCGGCACGACGAGTCCACCCGAGAGCTAGAGT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAGCTCCATTTCCTGCTaGAGCTGTAGCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSSISC*SCSLKA
Trigger: GGCCTTGAGGCTACAGCTCCAGCAGGAAATGGAGCT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCACTGCTGCTCTGGCTaGCTGTGCTCACGGACATGC +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYHCCSG*LCSRTC
Trigger: GCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGTG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGACGAGTTGTTGGCATaGGTCTCCACCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFDELLA*VSTSFC
Trigger: ACAGAAGGAGGTGGAGACGCATGCCAACAACTCGTC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCCCGAATGTTCTGCTaGTCCACCTCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSRMFC*STSCRL
Trigger: CAAGCGGCACGAGGTGGAGCAGCAGAACATTCGGGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCCTCCCGAATGTTCTaGTGCTCCACCTCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISSRMF*CSTSCR
Trigger: GCGGCACGAGGTGGAGCAGCAGAACATTCGGGAGGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCGGATTAGCATGGCATaGTCCATCTCCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFRISMA*SISFWV
Trigger: GACCCAGAAGGAGATGGAGCATGCCATGCTAATCCG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTGCCCACGAAGGAGTTaGCAGGAGAAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFCPRRS*QEKPLK
Trigger: CTTCAATGGCTTCTCCTGCCAACTCCTTCGTGGGCA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTTCACACTGCTGCTCTaGCTGCCTGTGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVFTLLL*LPVLTD
Trigger: GTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCCCACACTTGTTCCTaGGTCGCTCTCCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSHTCS*VALLWL
Trigger: AAGCCACAGGAGAGCGACTCAGGAACAAGTGTGGGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAACTGCTCTCGTCCATaGCTTCCTGCATGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFNCSRP*LPACCS
Trigger: TGAACAGCATGCAGGAAGTCATGGACGAGAGCAGTT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCGTCATCGTGCATCATaGCAAGTTCGGAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFRHRAS*QVRNCS
Trigger: AGAGCAGTTCCGAACTTGTCATGATGCACGATGACG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCCAAAGATGCTGATTTaGTCGTGGCAAAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFPKMLI*SWQSAL
Trigger: GAGAGCGCTTTGCCACGATCAAATCAGCATCTTTGG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCATCCGCTTATAACCTaGCATCTGTTCCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFHPLIT*HLFPQL
Trigger: GAGTTGCGGGAACAGATGTCAGGTTATAAGCGGATG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCCTCCTTCTGTAGCTTaGGGCGGTGCTCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIPPSVA*GGARPS
Trigger: AGATGGACGAGCACCGCCTCAAGCTACAGAAGGAGG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCACAGTCTCTGTTGAGTaGGAAGGTGGGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFTVSVE*EGGLPL
Trigger: AAGAGGAAGCCCACCTTCTCACTCAACAGAGACTGT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTGCTCTGGCTGCCTGTaGTCACGGACATGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVCSGCL*SRTCLE
Trigger: TTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGCTGTTCACACTGCTaGTCTGGCTGCCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCCSHC*SGCLCS
Trigger: TGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGCA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTGCTGTTCACACTGCTaGTCTGGCTGCCTGTGCTCA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVCCSHC*SGCLCS
Trigger: TGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGCA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGCATGCTGTTCACACTaGTGCTCTGGCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIACCSH*CSGCLC
Trigger: GCACAGGCAGCCAGAGCAGCAGTGTGAACAGCATGC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCGCAACTCGTTCTCCTaGTCATGCTCATGGATCTGT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFRNSFS*SCSWIC
Trigger: ACAGATCCATGAGCATGAGCAGGAGAACGAGTTGCG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGTAGCTTGAGGCGGTaGTCGTCCATCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCSLRR*SSISAF
Trigger: GAAGGCTGAGATGGACGAGCACCGCCTCAAGCTACA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTCCCGAATGTTCTGCTaGTCCACCTCGTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSRMFC*STSCRL
Trigger: CAAGCGGCACGAGGTGGAGCAGCAGAACATTCGGGA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGCTCAAGGTGTGCTCTaGGCAGAGACACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDAQGVL*AETLSA
Trigger: AGCAGAGAGTGTCTCTGCGCAGAGCACACCTTGAGC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTTCACACTGCTGCTCTaGCTGCCTGTGCTCACGGAC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIFTLLL*LPVLTD
Trigger: GTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCGATGGACGAGTTGTTaGCATGCGTCTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVRWTSC*HASPPP
Trigger: AGGAGGTGGAGACGCATGCCAACAACTCGTCCATCG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCTCCAAATACTGAACTaGAAAAGGAGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFLQILN*KRREVG
Trigger: CCCCACCTCCCTCCTTTTCCAGTTCAGTATTTGGAG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTTCCTCATCCTCCTGTaGCTCATTCAAGGGTCCATT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFFLILL*LIQGSI
Trigger: AATGGACCCTTGAATGAGTCACAGGAGGATGAGGAA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTCGCTGCGTTCCTTCTaGAGGGCAGCCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSLRSF*RAASSS
Trigger: AGAGGAGCTGGCTGCCCTTCAGAAGGAACGCAGCGA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGAGGAAGGGGGCCCCTaGTGGAGTAAGAATAAACAG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDEEGGP*WSKNKQ
Trigger: CTGTTTATTCTTACTCCATCAGGGGCCCCCTTCCTC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTTGGAATGGAATGGTTaGTGCCCAGGCTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFLEWNG*CPGCPF
Trigger: AAATGGACAGCCTGGGCAGCAACCATTCCATTCCAA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTGCTCTGGCTGCCTGTaGTCACGGACATGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYCSGCL*SRTCLE
Trigger: TTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTGTAGCTTGAGGCGGTaGTCGTCCATCTCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIICSLRR*SSISAF
Trigger: GAAGGCTGAGATGGACGAGCACCGCCTCAAGCTACA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGAACTTCTTCTCATCTaGTGCAGCTACCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFELLLI*CSYLCL
Trigger: GAGGCAAAGGTAGCTGCAGCAGATGAGAAGAAGTTC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTCCTCCCGAATGTTCTaGTGCTCCACCTCGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSSRMF*CSTSCR
Trigger: GCGGCACGAGGTGGAGCAGCAGAACATTCGGGAGGA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCGGATTAGCATGGCATaGTCCATCTCCTTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVRISMA*SISFWV
Trigger: GACCCAGAAGGAGATGGAGCATGCCATGCTAATCCG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGTAACGTGTGCAGCTaGCTGTACTCTAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCNVCS*LYSSSR
Trigger: CCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCAGCTCCATTTCCTaGTGGAGCTGTAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSSSIS*WSCSLK
Trigger: CTTGAGGCTACAGCTCCAGCAGGAAATGGAGCTGCT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCTTCTGCTCAAGGTGTaGTCTGCGCAGAGACACTCT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLLLKV*SAQRHS
Trigger: AGAGTGTCTCTGCGCAGAGCACACCTTGAGCAGAAG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTGCCCACGAAGGAGTTaGCAGGAGAAGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVCPRRS*QEKPLK
Trigger: CTTCAATGGCTTCTCCTGCCAACTCCTTCGTGGGCA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATATGCTTGGAATGGAATaGTTGCTGCCCAGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDMLGME*LLPRLS
Trigger: GGACAGCCTGGGCAGCAACCATTCCATTCCAAGCAT...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGCTCACGGACATGCTTaGAATGGAATGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDAHGHA*NGMVAA
Trigger: GGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCGATGGACGAGTTGTTaGCATGCGTCTCCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYRWTSC*HASPPP
Trigger: AGGAGGTGGAGACGCATGCCAACAACTCGTCCATCG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGCTTCTCCAGCTCGATaGACGAGTTGTTGGCATGCG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYASPAR*TSCWHA
Trigger: CGCATGCCAACAACTCGTCCATCGAGCTGGAGAAGC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTAGCTCCATTTCCTGCTaGAGCTGTAGCCTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISSISC*SCSLKA
Trigger: GGCCTTGAGGCTACAGCTCCAGCAGGAAATGGAGCT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCTCTGCTCTAGCTTCTaGAGCTCACGTTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFLCSSF*SSRSCC
Trigger: ACAACATGAACGTGAGCTCCAGAAGCTAGAGCAGAG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGCACCCCTTTACGCATaGTGGCCAGTAGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVAPLYA*WPVEQA
Trigger: AGCCTGCTCTACTGGCCATCATGCGTAAAGGGGTGC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGGCAGGAGAAGCCATTaGAGCAGATCCAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVGRRSH*SRSKIS
Trigger: GCTGATTTTGGATCTGCTTCAATGGCTTCTCCTGCC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAACTGCTCTCGTCCATaGCTTCCTGCATGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVNCSRP*LPACCS
Trigger: TGAACAGCATGCAGGAAGTCATGGACGAGAGCAGTT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCGGAGGAGCTGGAATTaGTTGTGCTTTCGTCATCGT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVRRSWN*LCFRHR
Trigger: ACGATGACGAAAGCACAATCAATTCCAGCTCCTCCG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCATCCGCTTATAACCTaGCATCTGTTCCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDHPLIT*HLFPQL
Trigger: GAGTTGCGGGAACAGATGTCAGGTTATAAGCGGATG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTTGAACTCCAAATACTaGACTGGAAAAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFLNSKY*TGKGGR
Trigger: CCTCCCTCCTTTTCCAGTTCAGTATTTGGAGTTCAA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGAATGGAATGGTTGCTaGCCAGGCTGTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIEWNGC*PGCPFP
Trigger: GGGAAATGGACAGCCTGGGCAGCAACCATTCCATTC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCTGTGCTCACGGACATaGTTGGAATGGAATGGTTGC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLCSRT*LEWNGC
Trigger: GCAACCATTCCATTCCAAGCATGTCCGTGAGCACAG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGCATGCTGTTCACACTaGTGCTCTGGCTGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVACCSH*CSGCLC
Trigger: GCACAGGCAGCCAGAGCAGCAGTGTGAACAGCATGC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCGTCCATGACTTCCTaGATGCTGTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSSMTS*MLFTLL
Trigger: CAGCAGTGTGAACAGCATGCAGGAAGTCATGGACGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGACGAGTTGTTGGCATaGGTCTCCACCTCCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYDELLA*VSTSFC
Trigger: ACAGAAGGAGGTGGAGACGCATGCCAACAACTCGTC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTGTAACGTGTGCAGCTaGCTGTACTCTAGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIICNVCS*LYSSSR
Trigger: CCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCCAGTTCCGTCTGGTaGTGTAAACGGATCAGATCC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSSSVW*CKRIRS
Trigger: GGATCTGATCCGTTTACAGCACCAGACGGAACTGGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCCAGTTCCGTCTGGTaGTGTAAACGGATCAGATCC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSSSVW*CKRIRS
Trigger: GGATCTGATCCGTTTACAGCACCAGACGGAACTGGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATAGCAGCTCCATTTCCTaGTGGAGCTGTAGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSSSIS*WSCSLK
Trigger: CTTGAGGCTACAGCTCCAGCAGGAAATGGAGCTGCT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCGCAGAGACACTCTCTaGTCTAGCTTCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYRRDTL*SSFWSS
Trigger: TGAGCTCCAGAAGCTAGAGCAGAGAGTGTCTCTGCG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGCTCACGGACATGCTTaGAATGGAATGGTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYAHGHA*NGMVAA
Trigger: GGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAAATCTTTCTTCTGCTaGGCCAAGATCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFKSFFC*AKICCW
Trigger: CCAGCAACAGATCTTGGCCCAGCAGAAGAAAGATTT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTTTTCCAGTTCCGTCTaGTGCTGTAAACGGATCAGA +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFFSSSV*CCKRIR
Trigger: TCTGATCCGTTTACAGCACCAGACGGAACTGGAAAA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCCCAATTTGTGCTACTaGGATTCTGTGAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFPNLCY*DSVSSL
Trigger: TAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAGTCCTTTGTATTTATaGTGCAACCTCAGACCTGCT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSPLYL*CNLRPA
Trigger: AGCAGGTCTGAGGTTGCATCATAAATACAAAGGACT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCCATGCAAGGCTCCATaGGTAATGGCAGCGATCTCC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVPCKAP*VMAAIS
Trigger: GGAGATCGCTGCCATTACTCATGGAGCCTTGCATGG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCGTCATCGTGCATCATaGCAAGTTCGGAACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYRHRAS*QVRNCS
Trigger: AGAGCAGTTCCGAACTTGTCATGATGCACGATGACG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCGGAGGAGCTGGAATTaGTTGTGCTTTCGTCATCGT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYRRSWN*LCFRHR
Trigger: ACGATGACGAAAGCACAATCAATTCCAGCTCCTCCG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATACAGTCTCTGTTGAGTaGGAAGGTGGGCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYTVSVE*EGGLPL
Trigger: AAGAGGAAGCCCACCTTCTCACTCAACAGAGACTGT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGTTGCCGAAGTTCCATaGCATGCTTTCTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVVAEVP*HAFCAV
Trigger: AACTGCACAGAAAGCATGTCATGGAACTTCGGCAAC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCCAACTGGTGATTCTTaGGTGCTTTATACTGTTTGG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFPTGDS*VLYTVW
Trigger: CCAAACAGTATAAAGCACTCAAGAATCACCAGTTGG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTGGCATTCTGCTTCTTaGGCCTCATCTAGCCGTAAC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIWHSAS*ASSSRN
Trigger: GTTACGGCTAGATGAGGCTCAAGAAGCAGAATGCCA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCCTCTGTTTGCATCTTaGTTTTGCTCTGGTAGGCGT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDPLFAS*FCSGRR
Trigger: ACGCCTACCAGAGCAAAATCAAGATGCAAACAGAGG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCTGTGCTCACGGACATaGTTGGAATGGAATGGTTGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIILCSRT*LEWNGC
Trigger: GCAACCATTCCATTCCAAGCATGTCCGTGAGCACAG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCGCAACTCGTTCTCCTaGTCATGCTCATGGATCTGT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYRNSFS*SCSWIC
Trigger: ACAGATCCATGAGCATGAGCAGGAGAACGAGTTGCG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCTATGATAGCCACTTaGTTCTTGGCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSMIAT*FLASFS
Trigger: GGAGAAGCTGGCCAAGAAGCAAGTGGCTATCATAGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCTTCTTCTCATCTGCTaGAGCTACCTTTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLLLIC*SYLCLL
Trigger: AAGGAGGCAAAGGTAGCTGCAGCAGATGAGAAGAAG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTGGAGATCCGCTCTTaGTTCTCTTTCTTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLEIRS*FSFLGV
Trigger: CACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTCAGCCTGTGTGTGCTaGAAGTTCTCTTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSACVC*KFSLCL
Trigger: CAAACATAAAGAGAACTTGCAGCACACACAGGCTGA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGCTGCTCCACCTCGTaGCGCTTGATCATTATTTTC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCCSTS*RLIIIF
Trigger: GAAAATAATGATCAAGCGGCACGAGGTGGAGCAGCA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGCTCAAGGTGTGCTCTaGGCAGAGACACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVAQGVL*AETLSA
Trigger: AGCAGAGAGTGTCTCTGCGCAGAGCACACCTTGAGC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTCCTCTTCAATCTTCTaGTCAAGGTGTGCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSSSIF*SRCALR
Trigger: GCGCAGAGCACACCTTGAGCAGAAGATTGAAGAGGA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCCAAAGCCCAATTTGTaGTACTGGGATTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVPKPNL*YWDSVS
Trigger: GCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCGGACATGCTTGGAATaGAATGGTTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVRTCLE*NGCCPG
Trigger: GCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGCTTCTCCAGCTCGATaGACGAGTTGTTGGCATGCG +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVASPAR*TSCWHA
Trigger: CGCATGCCAACAACTCGTCCATCGAGCTGGAGAAGC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGACTCTAGCTCTCGGGTaGACTCGTCGTGCCGGATTA +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVTLALG*TRRAGL
Trigger: TAATCCGGCACGACGAGTCCACCCGAGAGCTAGAGT...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCTCTGCTCTAGCTTCTaGAGCTCACGTTCATGTTGT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLCSSF*SSRSCC
Trigger: ACAACATGAACGTGAGCTCCAGAAGCTAGAGCAGAG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAAAAACAGCGTGATCTaGGTGCCACACATTACTATC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFKNSVI*VPHITI
Trigger: GATAGTAATGTGTGGCACCCAGATCACGCTGTTTTT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCAGCTAGTTTTACCTaGCCTGGCTCTGTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSASFT*PGSVRR
Trigger: TCTTCTAACAGAGCCAGGTCAGGTAAAACTAGCTGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGATGTTGGCCTTTCCTaGGGTATTTTCTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYDVGLS*GIFCKQ
Trigger: CTGCTTGCAGAAAATACCTCAGGAAAGGCCAACATC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGATGTTGGCCTTTCCTaGGGTATTTTCTGCAAGCAG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIDVGLS*GIFCKQ
Trigger: CTGCTTGCAGAAAATACCTCAGGAAAGGCCAACATC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTCCCTTATGAATACATaGTCTTTCTTATGCACGACG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSLMNT*SFLCTT
Trigger: CGTCGTGCATAAGAAAGATCATGTATTCATAAGGGA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCCGCCTCATCCCTTATaGATACATGATCTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFPPHPL*IHDLSY
Trigger: ATAAGAAAGATCATGTATTCATAAGGGATGAGGCGG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGTAACCAAAGATGCTaGTTTGATCGTGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCNQRC*FDRGKA
Trigger: CGCTTTGCCACGATCAAATCAGCATCTTTGGTTACA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGTAACTTCCAACTGGTaGTTCTTGAGTGCTTTATAC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFVTSNW*FLSALY
Trigger: GTATAAAGCACTCAAGAATCACCAGTTGGAAGTTAC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCTAGCCGTAACGCTTaGGAGGCCATCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSSRNA*EAIISF
Trigger: AAATGAAATGATGGCCTCTCAAGCGTTACGGCTAGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCTAGCCGTAACGCTTaGGAGGCCATCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSSRNA*EAIISF
Trigger: AAATGAAATGATGGCCTCTCAAGCGTTACGGCTAGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCCCAAATCCCATTCTaGGGCTCTCCATGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISQIPF*GSPCQK
Trigger: CTTTTGACATGGAGAGCCTCAGAATGGGATTTGGGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTGAACTCCAAATACTaGACTGGAAAAGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLNSKY*TGKGGR
Trigger: CCTCCCTCCTTTTCCAGTTCAGTATTTGGAGTTCAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCAGATAAAAACAGCGTaGTCTGGGTGCCACACATTA +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDQIKTA*SGCHTL
Trigger: TAATGTGTGGCACCCAGATCACGCTGTTTTTATCTG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGAATGGAATGGTTGCTaGCCAGGCTGTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVEWNGC*PGCPFP
Trigger: GGGAAATGGACAGCCTGGGCAGCAACCATTCCATTC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTTGGAATGGAATGGTTaGTGCCCAGGCTGTCCATTT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYLEWNG*CPGCPF
Trigger: AAATGGACAGCCTGGGCAGCAACCATTCCATTCCAA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGTGCTTTCGTCATCGTaGATCATGACAAGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVVLSSS*IMTSSE
Trigger: TTCCGAACTTGTCATGATGCACGATGACGAAAGCAC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCTATGATAGCCACTTaGTTCTTGGCCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISMIAT*FLASFS
Trigger: GGAGAAGCTGGCCAAGAAGCAAGTGGCTATCATAGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTGCTGCAGCTACCTTTaGCTCCTTTTCTATGATAGC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDCCSYL*LLFYDS
Trigger: GCTATCATAGAAAAGGAGGCAAAGGTAGCTGCAGCA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCTTCTTCTCATCTGCTaGAGCTACCTTTGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYLLLIC*SYLCLL
Trigger: AAGGAGGCAAAGGTAGCTGCAGCAGATGAGAAGAAG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGAACTTCTTCTCATCTaGTGCAGCTACCTTTGCCTC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIELLLI*CSYLCL
Trigger: GAGGCAAAGGTAGCTGCAGCAGATGAGAAGAAGTTC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGTCAAATCTTTCTTCTaGTGGGCCAAGATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVVKSFF*WAKICC
Trigger: GCAACAGATCTTGGCCCAGCAGAAGAAAGATTTGAC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGTCAAATCTTTCTTCTaGTGGGCCAAGATCTGTTGC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDVKSFF*WAKICC
Trigger: GCAACAGATCTTGGCCCAGCAGAAGAAAGATTTGAC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTGCTGCTCCACCTCGTaGCGCTTGATCATTATTTTC +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYCCSTS*RLIIIF
Trigger: GAAAATAATGATCAAGCGGCACGAGGTGGAGCAGCA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAACGGATCAGATCCATaGGTAGCTTCTGTAACGTGT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVNGSDP*VASVTC
Trigger: ACACGTTACAGAAGCTACGCATGGATCTGATCCGTT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATAACGGATCAGATCCATaGGTAGCTTCTGTAACGTGT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDNGSDP*VASVTC
Trigger: ACACGTTACAGAAGCTACGCATGGATCTGATCCGTT...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCGTTTGGTCTGTACTTTaGAAGTGTCCTGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFVWSVL*KCPETV
Trigger: AACAGTTTCAGGACACTTGCAAAGTACAGACCAAAC...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCCTGGTGATTCTTGAGTaGTTTATACTGTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFLVILE*FILFGL
Trigger: CAGACCAAACAGTATAAAGCACTCAAGAATCACCAG...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCGCAGAGACACTCTCTaGTCTAGCTTCTGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVRRDTL*SSFWSS
Trigger: TGAGCTCCAGAAGCTAGAGCAGAGAGTGTCTCTGCG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTTCTGCTCAAGGTGTaGTCTGCGCAGAGACACTCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLLLKV*SAQRHS
Trigger: AGAGTGTCTCTGCGCAGAGCACACCTTGAGCAGAAG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTCTTTATTCTCTCGCTaGGTTCCTTCTGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSLFSR*VPSEGQ
Trigger: CTGCCCTTCAGAAGGAACGCAGCGAGAGAATAAAGA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCCAAAGCCCAATTTGTaGTACTGGGATTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIPKPNL*YWDSVS
Trigger: GCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTTCCCTGTTCAGGCTaGTTCCATGTTCACTGTCTT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFPCSG*FHVHCL
Trigger: AAGACAGTGAACATGGAACCAGCCTGAACAGGGAAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCCTGCTCATGCTCATaGATCTGTCGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSCSCS*ICRVTK
Trigger: TTTGGTTACACGACAGATCCATGAGCATGAGCAGGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAAATCTTTCTTCTGCTaGGCCAAGATCTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVKSFFC*AKICCW
Trigger: CCAGCAACAGATCTTGGCCCAGCAGAAGAAAGATTT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCTTGCTTCTCTTTCTTaGGTGTGCTATGGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLASLS*VCYGPH
Trigger: ATGAGGACCATAGCACACCCAAGAAAGAGAAGCAAG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTGCTCCATCTCCTTCTaGGTCCTCTTTTTATTTAGT +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFCSISF*VLFLFS
Trigger: ACTAAATAAAAAGAGGACCCAGAAGGAGATGGAGCA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTTTCCAGTTCCGTCTaGTGCTGTAAACGGATCAGA +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFSSSV*CCKRIR
Trigger: TCTGATCCGTTTACAGCACCAGACGGAACTGGAAAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCAACGCCCGTTAAAATaGGGAATGTGGTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYQRPLK*GMWFCR
Trigger: CCTGCAAAACCACATTCCCCATTTTAACGGGCGTTG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGAGACGGCCAGGTTTTaGCCAGCACTGAAAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVETARF*PALKVD
Trigger: GTCAACTTTCAGTGCTGGCCAAAACCTGGCCGTCTC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCCCAATTTGTGCTACTaGGATTCTGTGAGCTCCTTA +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDPNLCY*DSVSSL
Trigger: TAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTCAGCTAGTTTTACCTaGCCTGGCTCTGTTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSASFT*PGSVRR
Trigger: TCTTCTAACAGAGCCAGGTCAGGTAAAACTAGCTGA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGGCAGGAGAAGCCATTaGAGCAGATCCAAAATCAGC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVGRRSH*SRSKIS
Trigger: GCTGATTTTGGATCTGCTTCAATGGCTTCTCCTGCC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCCAAAGATGCTGATTTaGTCGTGGCAAAGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVPKMLI*SWQSAL
Trigger: GAGAGCGCTTTGCCACGATCAAATCAGCATCTTTGG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCATCAGTATTGCAAGCTaGAGTATTTCCTGTTACAAC +
Preference number: 4 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFISIAS*SISCYN
Trigger: GTTGTAACAGGAAATACTTCAGCTTGCAATACTGAT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTCGTCCATGACTTCCTaGATGCTGTTCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSSMTS*MLFTLL
Trigger: CAGCAGTGTGAACAGCATGCAGGAAGTCATGGACGA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTGCTGCAGCTACCTTTaGCTCCTTTTCTATGATAGC +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYCCSYL*LLFYDS
Trigger: GCTATCATAGAAAAGGAGGCAAAGGTAGCTGCAGCA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCTTCAGCCTGTGTGTaGTGCAAGTTCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSSACV*CKFSLC
Trigger: ACATAAAGAGAACTTGCAGCACACACAGGCTGAAGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCTTCAGCCTGTGTGTaGTGCAAGTTCTCTTTATGT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSSACV*CKFSLC
Trigger: ACATAAAGAGAACTTGCAGCACACACAGGCTGAAGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCGAAGTTCCATGACATaGTTTCTGTGCAGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVRSSMT*FLCSSL
Trigger: AAGAGAACTGCACAGAAAGCATGTCATGGAACTTCG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGACTGCTCTGCCAAAATaGCAAGTTTTCTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVTALPK*QVFLSA
Trigger: AGCAGACAAGAAAACTTGCCATTTTGGCAGAGCAGT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATACTGCTCTGCCAAAATaGCAAGTTTTCTTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDTALPK*QVFLSA
Trigger: AGCAGACAAGAAAACTTGCCATTTTGGCAGAGCAGT...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTTATGACCAAGAAATaGGACTTAGGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFMTKK*DLGRGR
Trigger: CCTTCCCCTTCCTAAGTCCCATTTCTTGGTCATAAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTTCCTCATCCTCCTGTaGCTCATTCAAGGGTCCATT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVFLILL*LIQGSI
Trigger: AATGGACCCTTGAATGAGTCACAGGAGGATGAGGAA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCCGCCTCATCCCTTATaGATACATGATCTTTCTTAT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDPPHPL*IHDLSY
Trigger: ATAAGAAAGATCATGTATTCATAAGGGATGAGGCGG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGTTGCCGAAGTTCCATaGCATGCTTTCTGTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVVAEVP*HAFCAV
Trigger: AACTGCACAGAAAGCATGTCATGGAACTTCGGCAAC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTCCTTAAGAATATCTTaGCATTTCTCATGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDSLRIS*HFSWVC
Trigger: GCAGACCCATGAGAAATGGCAAGATATTCTTAAGGA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTTGGAGATCCGCTCTTaGTTCTCTTTCTTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLEIRS*FSFLGV
Trigger: CACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTCAGCCTGTGTGTGCTaGAAGTTCTCTTTATGTTTG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSACVC*KFSLCL
Trigger: CAAACATAAAGAGAACTTGCAGCACACACAGGCTGA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTTCTTGGGTGTGCTATaGTCCTCATTCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYFLGVL*SSFISS
Trigger: AGAGGAAATGAATGAGGACCATAGCACACCCAAGAA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTTGTGCTCATTCTTTaGAGTAACTTCCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFVLIL*SNFQLV
Trigger: CACCAGTTGGAAGTTACTCCAAAGAATGAGCACAAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTTTATGACCAAGAAATaGGACTTAGGAAGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIFMTKK*DLGRGR
Trigger: CCTTCCCCTTCCTAAGTCCCATTTCTTGGTCATAAA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
3UTR CAA 72 bp TCTATACACAAAATACACGATTTGCCAAAGCCCAATTaGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTA +
Preference number: 4 (lower is better)
Translates to: SIHKIHDLPKPN*CYWDSVSSLSV
Trigger: TACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCCAATTCAATACAAGTaGTGCCAAGTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDPIQYK*CQVTKY
Trigger: ATATTTGGTCACTTGGCATCACTTGTATTGAATTGG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCCCTTATGAATACATaGTCTTTCTTATGCACGACG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISLMNT*SFLCTT
Trigger: CGTCGTGCATAAGAAAGATCATGTATTCATAAGGGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTGTAACCAAAGATGCTaGTTTGATCGTGGCAAAGCG +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVCNQRC*FDRGKA
Trigger: CGCTTTGCCACGATCAAATCAGCATCTTTGGTTACA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGTAACTTCCAACTGGTaGTTCTTGAGTGCTTTATAC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIVTSNW*FLSALY
Trigger: GTATAAAGCACTCAAGAATCACCAGTTGGAAGTTAC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATATTGAGAGACAGTGTTaGACTCCAAATACTGAACTG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYIERQC*TPNTEL
Trigger: CAGTTCAGTATTTGGAGTTCAACACTGTCTCTCAAT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTATTGAGAGACAGTGTTaGACTCCAAATACTGAACTG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIIERQC*TPNTEL
Trigger: CAGTTCAGTATTTGGAGTTCAACACTGTCTCTCAAT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAAGATCAAGATGATCTaGTTGAGAGACAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVKIKMI*LRDSVE
Trigger: TTCAACACTGTCTCTCAATCAGATCATCTTGATCTT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTGTAGCAAAATAAACTaGTCCAAAACTTCCATGTCC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVCSKIN*SKTSMS
Trigger: GGACATGGAAGTTTTGGAGCAGTTTATTTTGCTACA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCCTTAAGAATATCTTaGCATTTCTCATGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISLRIS*HFSWVC
Trigger: GCAGACCCATGAGAAATGGCAAGATATTCTTAAGGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGTGCTTTCGTCATCGTaGATCATGACAAGTTCGGAA +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVVLSSS*IMTSSE
Trigger: TTCCGAACTTGTCATGATGCACGATGACGAAAGCAC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTGGGCCAAGATCTGTTaGTGGAACTTCTTCTCATCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVWAKIC*WNFFSS
Trigger: AGATGAGAAGAAGTTCCAGCAACAGATCTTGGCCCA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCTGGTGATTCTTGAGTaGTTTATACTGTTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIILVILE*FILFGL
Trigger: CAGACCAAACAGTATAAAGCACTCAAGAATCACCAG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGCAAGTTTTCTTGTCTaGTCATCTTTCAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDASFLV*SSFSVF
Trigger: AAAGACACTGAAAGATGAGCAGACAAGAAAACTTGC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCTGTTCATACTGCTCTaGCAAAATGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYLFILL*QNGKFS
Trigger: AGAAAACTTGCCATTTTGGCAGAGCAGTATGAACAG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTATACTCTGTTCATACTaGTCTGCCAAAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIILCSY*SAKMAS
Trigger: ACTTGCCATTTTGGCAGAGCAGTATGAACAGAGTAT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATATACTCTGTTCATACTaGTCTGCCAAAATGGCAAGT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYILCSY*SAKMAS
Trigger: ACTTGCCATTTTGGCAGAGCAGTATGAACAGAGTAT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGACAAAATACACGATTTaGCAAAGCCCAATTTGTGCT +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVTKYTI*QSPICA
Trigger: AGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTCCTGCTCATGCTCATaGATCTGTCGTGTAACCAAA +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSCSCS*ICRVTK
Trigger: TTTGGTTACACGACAGATCCATGAGCATGAGCAGGA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATAGTTCTCTTTATGTTTaGAGATCCGCTCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSSLYV*RSALAS
Trigger: AGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTAGTTCTCTTTATGTTTaGAGATCCGCTCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISSLYV*RSALAS
Trigger: AGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTGCTCCATCTCCTTCTaGGTCCTCTTTTTATTTAGT +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIICSISF*VLFLFS
Trigger: ACTAAATAAAAAGAGGACCCAGAAGGAGATGGAGCA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGTGCTTTATACTGTTTaGTCTGTACTTTGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDVLYTV*SVLCKC
Trigger: ACACTTGCAAAGTACAGACCAAACAGTATAAAGCAC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTTTGTGCTCATTCTTTaGAGTAACTTCCAACTGGTG +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYFVLIL*SNFQLV
Trigger: CACCAGTTGGAAGTTACTCCAAAGAATGAGCACAAA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTAAGATCAAGATGATCTaGTTGAGAGACAGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIKIKMI*LRDSVE
Trigger: TTCAACACTGTCTCTCAATCAGATCATCTTGATCTT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTGCAAGTTTTCTTGTCTaGTCATCTTTCAGTGTCTTT +
Preference number: 4 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIASFLV*SSFSVF
Trigger: AAAGACACTGAAAGATGAGCAGACAAGAAAACTTGC...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGTGGTAATGAGTGATTaGTTAAAGCAATATACATCC +
Preference number: 4 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVVVMSD*LKQYTS
Trigger: GGATGTATATTGCTTTAAGCAATCACTCATTACCAC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGACAAGTTAAACTCTTaGCAGCAGGTTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: DSVSSLSVFTSSATAENDDKLNS*QQVLKN
Trigger: ATTTTTAAGAACCTGCTGGCAAGAGTTTAACTTGTC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTTCTTGGGTGTGCTATaGTCCTCATTCATTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVFLGVL*SSFISS
Trigger: AGAGGAAATGAATGAGGACCATAGCACACCCAAGAA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGTGCTTTATACTGTTTaGTCTGTACTTTGCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYVLYTV*SVLCKC
Trigger: ACACTTGCAAAGTACAGACCAAACAGTATAAAGCAC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGAGTCCTTTGTATTTATaGTGCAACAGGAGGACAACT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVSPLYL*CNRRTT
Trigger: AGTTGTCCTCCTGTTGCATCATAAATACAAAGGACT...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTGTTCATACTGCTCTaGCAAAATGGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLFILL*QNGKFS
Trigger: AGAAAACTTGCCATTTTGGCAGAGCAGTATGAACAG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGACAAGTTAAACTCTTaGCAGCAGGTTCTTAAAAAT +
Preference number: 4 (lower is better)
Translates to: SVSSLSVFTSSATAENDYDKLNS*QQVLKN
Trigger: ATTTTTAAGAACCTGCTGGCAAGAGTTTAACTTGTC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR TCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCCAATTCAATACAAGTaGTGCCAAGTGACCAAATAT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVPIQYK*CQVTKY
Trigger: ATATTTGGTCACTTGGCATCACTTGTATTGAATTGG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR GCA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGACAAAATACACGATTTaGCAAAGCCCAATTTGTGCT +
Preference number: 4 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVTKYTI*QSPICA
Trigger: AGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGT...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS GCA 90 bp GTGCCGGATCCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGGCGTTaGGTCCCACTCTCCACGCAGGACCCCGCCGCCCGGCGCCACAAG +
Preference number: 5 (lower is better)
Translates to: VPDPAVRSLCSRSRR*VPLSTQDPAARRHK
Trigger: CTTGTGGCGCCGGGCGGCGGGGTCCTGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS GCA 90 bp CCCGGCGGATCCTTGGGTCCGGTCGCTGAGTGCCGGATCCGGCTGTaGGCAGCCTCTGCTCGCGGTCTCGGCGTTGCGTCCCACTCTCCA +
Preference number: 5 (lower is better)
Translates to: PGGSLGPVAECRIRL*AASARGLGVASHSP
Trigger: TGGAGAGTGGGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS TCA 90 bp GCTCTCCTGTGGCTTGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTaGGTGCCGGATCCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGG +
Preference number: 5 (lower is better)
Translates to: ALLWLVPRRILGSGR*VPDPAVRSLCSRSR
Trigger: CCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGAGAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS GCA 90 bp TCCTGTGGCTTGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTGAGTaGCGGATCCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGGCGTT +
Preference number: 5 (lower is better)
Translates to: SCGLFPGGSLGPVAE*RIRLCAASARGLGV
Trigger: AACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS GCA 90 bp GCCTCATCTAGCCGTAACTGCGGACACAGAAGACACACACGGTCATaGACCCTTGCCTACAGCCCTTGGTGGCCTACAGCCCTTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ASSSRNCGHRRHTRS*TLAYSPWWPTALGD
Trigger: GTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTGTGTGTCTTCTGTGTCCGCAGTTACGGCTAGATGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS GCA 90 bp TGCTTCTTGGCCAGCTTCTCCAGCTCGATGGACGAGTTGTTGGCATaGGTCTCCACCTCCTTCTGTAGCTTGAGGCGGTGCTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: CFLASFSSSMDELLA*VSTSFCSLRRCSSI
Trigger: GATGGACGAGCACCGCCTCAAGCTACAGAAGGAGGTGGAGACGCATGCCAACAACTCGTCCATCGAGCTGGAGAAGCTGGCCAAGAAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp CTGCTGCTCTGGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATaGTTGCTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTGGTTCCA +
Preference number: 5 (lower is better)
Translates to: LLLWLPVLTDMLGME*LLPRLSISLFRLVP
Trigger: TGGAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 90 bp TGGTGCTGTAAACGGATCAGATCCATGCGTAGCTTCTGTAACGTGTaGAGCTGCCTGTACTCTAGCTCTCGGGTGGACTCGTCGTGCCGG +
Preference number: 5 (lower is better)
Translates to: WCCKRIRSMRSFCNV*SCLYSSSRVDSSCR
Trigger: CCGGCACGACGAGTCCACCCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGATCCGTTTACAGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp GCTGTTCACACTGCTGCTCTGGCTGCCTGTGCTCACGGACATGCTTaGAATGGAATGGTTGCTGCCCAGGCTGTCCATTTCCCTGTTCAG +
Preference number: 5 (lower is better)
Translates to: AVHTAALAACAHGHA*NGMVAAQAVHFPVQ
Trigger: CTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 90 bp TCTGGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTTGCTaGCCAGGCTGTCCATTTCCCTGTTCAGGCTGGTTCCATGTTCAC +
Preference number: 5 (lower is better)
Translates to: SGCLCSRTCLEWNGC*PGCPFPCSGWFHVH
Trigger: GTGAACATGGAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 90 bp TGCTCTGGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTTaGTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTGGTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: CSGCLCSRTCLEWNG*CPGCPFPCSGWFHV
Trigger: AACATGGAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 90 bp TCGTGCATCATGACAAGTTCGGAACTGCTCTCGTCCATGACTTCCTaGATGCTGTTCACACTGCTGCTCTGGCTGCCTGTGCTCACGGAC +
Preference number: 5 (lower is better)
Translates to: SCIMTSSELLSSMTS*MLFTLLLWLPVLTD
Trigger: GTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGCATGCAGGAAGTCATGGACGAGAGCAGTTCCGAACTTGTCATGATGCACGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS CCA 90 bp CTGCTCTCGTCCATGACTTCCTGCATGCTGTTCACACTGCTGCTCTaGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSSMTSCMLFTLLL*LPVLTDMLGMEWLL
Trigger: CAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGCATGCAGGAAGTCATGGACGAGAGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS TCA 90 bp ATTTCCTGCTGGAGCTGTAGCCTCAAGGCCTGGCATTCTGCTTCTTaGGCCTCATCTAGCCGTAACTGCGGACACAGAAGACACACACGG +
Preference number: 5 (lower is better)
Translates to: ISCWSCSLKAWHSAS*ASSSRNCGHRRHTR
Trigger: CCGTGTGTGTCTTCTGTGTCCGCAGTTACGGCTAGATGAGGCTCAAGAAGCAGAATGCCAGGCCTTGAGGCTACAGCTCCAGCAGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS GCA 90 bp TGTAAACGGATCAGATCCATGCGTAGCTTCTGTAACGTGTGCAGCTaGCTGTACTCTAGCTCTCGGGTGGACTCGTCGTGCCGGATTAGC +
Preference number: 5 (lower is better)
Translates to: CKRIRSMRSFCNVCS*LYSSSRVDSSCRIS
Trigger: GCTAATCCGGCACGACGAGTCCACCCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGATCCGTTTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp CACAGAAGACACACACGGTCATGCACCCTTGCCTACAGCCCTTGGTaGCCTACAGCCCTTGGTGACTACTGGAAGAGGTTTCCTCATTTG +
Preference number: 5 (lower is better)
Translates to: HRRHTRSCTLAYSPW*PTALGDYWKRFPHL
Trigger: CAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTGTGTGTCTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTTCCCCGGCGGATCCTaGGGTCCGGTCGCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFFPGGS*GPVAEC
Trigger: GCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS TCA 90 bp GTCATGCACCCTTGCCTACAGCCCTTGGTGGCCTACAGCCCTTGGTaGCTACTGGAAGAGGTTTCCTCATTTGGATTGAAATTGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VMHPCLQPLVAYSPW*LLEEVSSFGLKLVA
Trigger: GGCAACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS GCA 90 bp GCTGGTTTTCCAGTTCCGTCTGGTGCTGTAAACGGATCAGATCCATaGGTAGCTTCTGTAACGTGTGCAGCTGCCTGTACTCTAGCTCTC +
Preference number: 5 (lower is better)
Translates to: AGFPVPSGAVNGSDP*VASVTCAAACTLAL
Trigger: GAGAGCTAGAGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGATCCGTTTACAGCACCAGACGGAACTGGAAAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp CATACATCTCATATTTGCTTCCTATGCCTTCCCCAGGGGCCATTCTaGACGTGGGTCATAAGGCTCCAAATGCTGCCATCCCAGGGCTTT +
Preference number: 5 (lower is better)
Translates to: HTSHICFLCLPQGPF*TWVIRLQMLPSQGF
Trigger: AAAGCCCTGGGATGGCAGCATTTGGAGCCTTATGACCCACGTCCAGAATGGCCCCTGGGGAAGGCATAGGAAGCAAATATGAGATGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 90 bp GATAAAAACAAGGAGAAAGTCCAGCTGTGCTCTTTCCTCGCCGGCTaGCTCTCTCTCACCCCTCTTTCTGCACAAGCACTGCTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: DKNKEKVQLCSFLAG*LSLTPLSAQALLFE
Trigger: TTCAAACAGCAGTGCTTGTGCAGAAAGAGGGGTGAGAGAGAGGCAGCCGGCGAGGAAAGAGCACAGCTGGACTTTCTCCTTGTTTTTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537952.1
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTCTCGCGGTCTCGGCGTaGCGTCCCACTCTCCACGCA +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIILAVSA*RPTLHA
Trigger: TGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGAG...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS TCA 90 bp TTCGGTAGGATCATCGTTCTGCCTAGAACCAATGTAGGCTTGTGCTaGACTGCCTCTCTATCTTGTGCTGGGAAGATTCGGCAGTCACTG +
Preference number: 5 (lower is better)
Translates to: FGRIIVLPRTNVGLC*TASLSCAGKIRQSL
Trigger: CAGTGACTGCCGAATCTTCCCAGCACAAGATAGAGAGGCAGTTCAGCACAAGCCTACATTGGTTCTAGGCAGAACGATGATCCTACCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS GCA 90 bp TTATGCACGACGGAGGAGCTGGAATTGATTGTGCTTTCGTCATCGTaGATCATGACAAGTTCGGAACTGCTCTCGTCCATGACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: LCTTEELELIVLSSS*IMTSSELLSSMTSC
Trigger: GCAGGAAGTCATGGACGAGAGCAGTTCCGAACTTGTCATGATGCACGATGACGAAAGCACAATCAATTCCAGCTCCTCCGTCGTGCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS CCA 90 bp GGGCTTCCTCTTCAGCCTGTGTGTGCTGCAAGTTCTCTTTATGTTTaGAGATCCGCTCTTGCTTCTCTTTCTTGGGTGTGCTATGGTCCT +
Preference number: 5 (lower is better)
Translates to: GLPLQPVCAASSLYV*RSALASLSWVCYGP
Trigger: AGGACCATAGCACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACTTGCAGCACACACAGGCTGAAGAGGAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp GGTGGCCTACAGCCCTTGGTGACTACTGGAAGAGGTTTCCTCATTTaGATTGAAATTGGTTGCCCCCTCAAAAACACAGATGCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: GGLQPLVTTGRGFLI*IEIGCPLKNTDALG
Trigger: ACCCAGAGCATCTGTGTTTTTGAGGGGGCAACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCGCTCTCCTGTGGCTaGTTCCCCGGCGGATCCTTG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSLSCG*FPGGSL
Trigger: CAAGGATCCGCCGGGGAACAAGCCACAGGAGAGCGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS GCA 90 bp CTCTCTATCTTGTGCTGGGAAGATTCGGCAGTCACTGAGGGATCCTaGTTTCCAGTCATGATCGTACACAGTTCTAGCACCTTCTCTCTA +
Preference number: 5 (lower is better)
Translates to: LSILCWEDSAVTEGS*FPVMIVHSSSTFSL
Trigger: TAGAGAGAAGGTGCTAGAACTGTGTACGATCATGACTGGAAAGCAGGATCCCTCAGTGACTGCCGAATCTTCCCAGCACAAGATAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537822.1
CDS GCA 90 bp ACAAAGCTCACCTCTGTGGAGGGTACCAAGAAACCTACTTTCTTATaGACGACGGAGGAGCTGGAATTGATTGTGCTTTCGTCATCGTGC +
Preference number: 5 (lower is better)
Translates to: TKLTSVEGTKKPTFL*TTEELELIVLSSSC
Trigger: GCACGATGACGAAAGCACAATCAATTCCAGCTCCTCCGTCGTGCATAAGAAAGTAGGTTTCTTGGTACCCTCCACAGAGGTGAGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTGCTCACGGACATGCTaGGAATGGAATGGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFCSRTC*EWNGCC
Trigger: GCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCGATGGACGAGTTGTaGGCATGCGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSMDEL*ACVSTS
Trigger: GGAGGTGGAGACGCATGCCAACAACTCGTCCATCGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp TCAAAGTCCCTATGTGCCACAGGTCTGATGTGGCATGTCACTCCTTaGGTTCCATCTTATAAGACACTCCAGCAAGTATCCACATTGGCT +
Preference number: 5 (lower is better)
Translates to: SKSLCATGLMWHVTP*VPSYKTLQQVSTLA
Trigger: AGCCAATGTGGATACTTGCTGGAGTGTCTTATAAGATGGAACTCAAGGAGTGACATGCCACATCAGACCTGTGGCACATAGGGACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS TCA 90 bp GGTATCTATCACATTTGCCCTCAAAGTCCCTATGTGCCACAGGTCTaGTGTGGCATGTCACTCCTTGAGTTCCATCTTATAAGACACTCC +
Preference number: 5 (lower is better)
Translates to: GIYHICPQSPYVPQV*CGMSLLEFHLIRHS
Trigger: GGAGTGTCTTATAAGATGGAACTCAAGGAGTGACATGCCACATCAGACCTGTGGCACATAGGGACTTTGAGGGCAAATGTGATAGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS TCA 90 bp CGATGTTTCTCTAAAGTGCTCCCTTTTCCCCATTTGCATCGACACTaGCCTTATTACCTCTTGCATGGACTATTAGCCAGGATGTTGCCC +
Preference number: 5 (lower is better)
Translates to: RCFSKVLPFPHLHRH*PYYLLHGLLARMLP
Trigger: GGGCAACATCCTGGCTAATAGTCCATGCAAGAGGTAATAAGGTCAGTGTCGATGCAAATGGGGAAAAGGGAGCACTTTAGAGAAACATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 90 bp GCCTGTGTGTGCTGCAAGTTCTCTTTATGTTTGGAGATCCGCTCTTaGTTCTCTTTCTTGGGTGTGCTATGGTCCTCATTCATTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ACVCCKFSLCLEIRS*FSFLGVLWSSFISS
Trigger: AGAGGAAATGAATGAGGACCATAGCACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACTTGCAGCACACACAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 90 bp CTCCTTGAGTTCCATCTTATAAGACACTCCAGCAAGTATCCACATTaGCTTGGCTTTATTCAACGTCGTCCTTTCCTCAGTCCTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LLEFHLIRHSSKYPH*LGFIQRRPFLSPLG
Trigger: GCCCAAAGGACTGAGGAAAGGACGACGTTGAATAAAGCCAAGCCAATGTGGATACTTGCTGGAGTGTCTTATAAGATGGAACTCAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCTTCCTCTCCCACACTaGTTCCTGAGTCGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLPLPH*FLSRSP
Trigger: AGGAGAGCGACTCAGGAACAAGTGTGGGAGAGGAAG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392533.8
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGTGCCCACGAAGGAGTaGGCAGGAGAAGCCATTGAA +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDVPTKE*AGEAIE
Trigger: TTCAATGGCTTCTCCTGCCAACTCCTTCGTGGGCAC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCACGGAGGAGCTGGAATaGATTGTGCTTTCGTCATCG +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFTEELE*IVLSSS
Trigger: CGATGACGAAAGCACAATCAATTCCAGCTCCTCCGT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTACCTCCTTCTGTAGCTaGAGGCGGTGCTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIITSFCS*RRCSSI
Trigger: GATGGACGAGCACCGCCTCAAGCTACAGAAGGAGGT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCGATGGACGAGTTGTaGGCATGCGTCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISMDEL*ACVSTS
Trigger: GGAGGTGGAGACGCATGCCAACAACTCGTCCATCGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATAGCTCGATGGACGAGTaGTTGGCATGCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYSSMDE*LACVST
Trigger: GGTGGAGACGCATGCCAACAACTCGTCCATCGAGCT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS GCA 90 bp TTGGTGACTACTGGAAGAGGTTTCCTCATTTGGATTGAAATTGGTTaGCCCCTCAAAAACACAGATGCTCTGGGTACATTCAGAGTTGGG +
Preference number: 5 (lower is better)
Translates to: LVTTGRGFLIWIEIG*PLKNTDALGTFRVG
Trigger: CCCAACTCTGAATGTACCCAGAGCATCTGTGTTTTTGAGGGGGCAACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CCA 90 bp CCTAAATTTGTGCAAGAATCATCTTGGGAACAACAGGCTGGATCTTaGATTTTCTTGATTCCCAAAGCTCTCGAAGCCGTGGCACCAAAC +
Preference number: 5 (lower is better)
Translates to: PKFVQESSWEQQAGS*IFLIPKALEAVAPN
Trigger: GTTTGGTGCCACGGCTTCGAGAGCTTTGGGAATCAAGAAAATCCAAGATCCAGCCTGTTGTTCCCAAGATGATTCTTGCACAAATTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTCTTGCTTCTCTTTCTaGGGTGTGCTATGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSCFSF*GVLWSS
Trigger: TGAGGACCATAGCACACCCAAGAAAGAGAAGCAAGA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp TCCTGCCTCTTTAACTATATCCCTTTCTTCTATCTTCGGTGCCTCTaGCTCTGCCCTGGCTCCATCTCTACTGCATTTAAAGATGAAGAA +
Preference number: 5 (lower is better)
Translates to: SCLFNYIPFFYLRCL*LCPGSISTAFKDEE
Trigger: TTCTTCATCTTTAAATGCAGTAGAGATGGAGCCAGGGCAGAGTCAGAGGCACCGAAGATAGAAGAAAGGGATATAGTTAAAGAGGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 90 bp TGGAACATCAAGGAGCTAGAGGAAGACTGCTGGCCACTAAACAGGTaGGCTCTAGGATATCTTCAAATACAGCAGTGGTCACTTGAAAAA +
Preference number: 5 (lower is better)
Translates to: WNIKELEEDCWPLNR*ALGYLQIQQWSLEK
Trigger: TTTTTCAAGTGACCACTGCTGTATTTGAAGATATCCTAGAGCTCACCTGTTTAGTGGCCAGCAGTCTTCCTCTAGCTCCTTGATGTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 90 bp TCTAAGAAAGTTGTCAAATCTTTCTTCTGCTGGGCCAAGATCTGTTaGTGGAACTTCTTCTCATCTGCTGCAGCTACCTTTGCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SKKVVKSFFCWAKIC*WNFFSSAAATFASF
Trigger: AAAGGAGGCAAAGGTAGCTGCAGCAGATGAGAAGAAGTTCCAGCAACAGATCTTGGCCCAGCAGAAGAAAGATTTGACAACTTTCTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS GCA 90 bp CTCTGCCCTGGCTCCATCTCTACTGCATTTAAAGATGAAGAAGCCTaGCTTATATTTATGGATCTCTCTACATGCTGCCCACTCTTACTT +
Preference number: 5 (lower is better)
Translates to: LCPGSISTAFKDEEA*LIFMDLSTCCPLLL
Trigger: AAGTAAGAGTGGGCAGCATGTAGAGAGATCCATAAATATAAGGCAGGCTTCTTCATCTTTAAATGCAGTAGAGATGGAGCCAGGGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 90 bp CCCTTTTCCCCATTTGCATCGACACTGACCTTATTACCTCTTGCATaGACTATTAGCCAGGATGTTGCCCATTCAAATCCATGTTACACT +
Preference number: 5 (lower is better)
Translates to: PFSPFASTLTLLPLA*TISQDVAHSNPCYT
Trigger: AGTGTAACATGGATTTGAATGGGCAACATCCTGGCTAATAGTCCATGCAAGAGGTAATAAGGTCAGTGTCGATGCAAATGGGGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATCTCATTGCATTCATGTaGAAAAGGGGCGGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLIAFM*KRGGFR
Trigger: ACGGAAGCCGCCCCTTTTCAACATGAATGCAATGAG...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATCTTGGAATGGAATGGTaGCTGCCCAGGCTGTCCATT +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYLGMEW*LPRLSI
Trigger: AATGGACAGCCTGGGCAGCAACCATTCCATTCCAAG...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGACGGAGGAGCTGGAATaGATTGTGCTTTCGTCATCG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVTEELE*IVLSSS
Trigger: CGATGACGAAAGCACAATCAATTCCAGCTCCTCCGT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGACCTCCTTCTGTAGCTaGAGGCGGTGCTCGTCCATC +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVTSFCS*RRCSSI
Trigger: GATGGACGAGCACCGCCTCAAGCTACAGAAGGAGGT...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCTGGGCCAAGATCTGTaGCTGGAACTTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLGQDL*LELLLI
Trigger: GATGAGAAGAAGTTCCAGCAACAGATCTTGGCCCAG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATGTAGTACAGTCTCTGTaGAGTGAGAAGGTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDVVQSL*SEKVGF
Trigger: GAAGCCCACCTTCTCACTCAACAGAGACTGTACTAC...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTCCACCTCGTGCCGCTaGATCATTATTTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSTSCR*IIIFRL
Trigger: CAAGCGGAAAATAATGATCAAGCGGCACGAGGTGGA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCTGGCCTTTAAGTTTTTaGGCTGTTGCCGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFWPLSF*AVAEVP
Trigger: TGGAACTTCGGCAACAGCCAAAAAACTTAAAGGCCA...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCATAGTTCTGCTGATGTaGGCCTTTCCTGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFIVLLM*AFPEVF
Trigger: AAATACCTCAGGAAAGGCCAACATCAGCAGAACTAT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTTCTATGATAGCCACTaGCTTCTTGGCCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVFYDSH*LLGQLL
Trigger: GAGAAGCTGGCCAAGAAGCAAGTGGCTATCATAGAA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTCTATGATAGCCACTaGCTTCTTGGCCAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFYDSH*LLGQLL
Trigger: GAGAAGCTGGCCAAGAAGCAAGTGGCTATCATAGAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTTGGAGATCCGCTCTaGCTTCTCTTTCTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDFGDPL*LLFLGC
Trigger: ACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCCACCTCGTGCCGCTaGATCATTATTTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISTSCR*IIIFRL
Trigger: CAAGCGGAAAATAATGATCAAGCGGCACGAGGTGGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGGAGCTCACGTTCATGTaGTGCCTCTGTTTGCATCTT +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVELTFM*CLCLHL
Trigger: AAGATGCAAACAGAGGCACAACATGAACGTGAGCTC...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGGTAAGGCTGCGGATATaGTGTCTCTCTCCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVVRLRI*CLSPPW
Trigger: CCAAGGGGGAGAGAGACACAATATCCGCAGCCTTAC...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGTTGCCAAAGCCCAATTaGTGCTACTGGGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVLPKPN*CYWDSV
Trigger: CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp GATTCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTTGCCAAAGCCCAATTaGTGCTACTGGGATTCTGTG +
Preference number: 5 (lower is better)
Translates to: DSVSSLSVFTSSATAENDLPKPN*CYWDSV
Trigger: CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA...ATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp TCACATGCCAGGTTTAGTACCACACTGCAGTTGCAAAAAGGTAACTaGAACATCTGGAAGCTAAGTGACTTGAACTGGATTCGCTATGAT +
Preference number: 5 (lower is better)
Translates to: SHARFSTTLQLQKGN*NIWKLSDLNWIRYD
Trigger: ATCATAGCGAATCCAGTTCAAGTCACTTAGCTTCCAGATGTTTCAGTTACCTTTTTGCAACTGCAGTGTGGTACTAAACCTGGCATGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 90 bp GAAGCCATGGATTATGAAATCTACCTCTACGATGTTTCTCTAAAGTaGTCCCTTTTCCCCATTTGCATCGACACTGACCTTATTACCTCT +
Preference number: 5 (lower is better)
Translates to: EAMDYEIYLYDVSLK*SLFPICIDTDLITS
Trigger: AGAGGTAATAAGGTCAGTGTCGATGCAAATGGGGAAAAGGGAGCACTTTAGAGAAACATCGTAGAGGTAGATTTCATAATCCATGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 90 bp TGCCCGGCCTCTACTAGCTTTTTATTACTTCATCCCTTTAAGCCTTaGTTTCTCACAGTAGATCTCAAACGCATGTCCTATATTTCCAGT +
Preference number: 5 (lower is better)
Translates to: CPASTSFLLLHPFKP*FLTVDLKRMSYISS
Trigger: ACTGGAAATATAGGACATGCGTTTGAGATCTACTGTGAGAAACCAAGGCTTAAAGGGATGAAGTAATAAAAAGCTAGTAGAGGCCGGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539872.5
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTTGGAATGGAATGGTaGCTGCCCAGGCTGTCCATT +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLGMEW*LPRLSI
Trigger: AATGGACAGCCTGGGCAGCAACCATTCCATTCCAAG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATACCAAAGATGCTGATTaGATCGTGGCAAAGCGCTCT +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYTKDAD*IVAKRS
Trigger: AGAGCGCTTTGCCACGATCAAATCAGCATCTTTGGT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTTCTTGCTTCTCTTTCTaGGGTGTGCTATGGTCCTCA +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIISCFSF*GVLWSS
Trigger: TGAGGACCATAGCACACCCAAGAAAGAGAAGCAAGA...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGCTCCTTAAGTGTATTCAGTGCTTTATACTGTTaGGTCTGTACTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: LPKPNLCYWDSVSSLSVFSALYC*VCTLQV
Trigger: CACTTGCAAAGTACAGACCAAACAGTATAAAGCACT...GAATACACTTAAGGAGCTCACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATGAGCTCACGTTCATGTaGTGCCTCTGTTTGCATCTT +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYELTFM*CLCLHL
Trigger: AAGATGCAAACAGAGGCACAACATGAACGTGAGCTC...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS CCA 90 bp GCGGGACATGAACTCTTTCCTTTGCCTCAGTTTCTACTATGTGTATaGCTTCATACCCTGAAGCTTTATATATTTATCTTATCTCTCCGG +
Preference number: 5 (lower is better)
Translates to: AGHELFPLPQFLLCV*LHTLKLYIFILSLR
Trigger: CCGGAGAGATAAGATAAATATATAAAGCTTCAGGGTATGAAGCCATACACATAGTAGAAACTGAGGCAAAGGAAAGAGTTCATGTCCCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541186.5
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGATAGTTCTGCTGATGTaGGCCTTTCCTGAGGTATTT +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVIVLLM*AFPEVF
Trigger: AAATACCTCAGGAAAGGCCAACATCAGCAGAACTAT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTGGGCCAAGATCTGTaGCTGGAACTTCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLGQDL*LELLLI
Trigger: GATGAGAAGAAGTTCCAGCAACAGATCTTGGCCCAG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATTGGCCTTTAAGTTTTTaGGCTGTTGCCGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYWPLSF*AVAEVP
Trigger: TGGAACTTCGGCAACAGCCAAAAAACTTAAAGGCCA...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGCACAAAATACACGATTaGCCAAAGCCCAATTTGTGC +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVHKIHD*PKPNLC
Trigger: GCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTG...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp AATGCTCAGAGTCACCTTAAACTCCTCCTTATCTGTCACTGTCAATaGGAAGCCATGGATTATGAAATCTACCTCTACGATGTTTCTCTA +
Preference number: 5 (lower is better)
Translates to: NAQSHLKLLLICHCQ*EAMDYEIYLYDVSL
Trigger: TAGAGAAACATCGTAGAGGTAGATTTCATAATCCATGGCTTCTCATTGACAGTGACAGATAAGGAGGAGTTTAAGGTGACTCTGAGCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 90 bp CCATCTCTACTGCATTTAAAGATGAAGAAGCCTGCCTTATATTTATaGATCTCTCTACATGCTGCCCACTCTTACTTTTCCTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: PSLLHLKMKKPALYL*ISLHAAHSYFSFLT
Trigger: GGTTAAGAAGGAAAAGTAAGAGTGGGCAGCATGTAGAGAGATCCATAAATATAAGGCAGGCTTCTTCATCTTTAAATGCAGTAGAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGTTTGGAGATCCGCTCTaGCTTCTCTTTCTTGGGTGT +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVFGDPL*LLFLGC
Trigger: ACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAA...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAGTGCTTTATACTGTTaGGTCTGTACTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVSALYC*VCTLQV
Trigger: CACTTGCAAAGTACAGACCAAACAGTATAAAGCACT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp ATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTACTGGGATTCTGTGAAATGGCAAGTTTTCTaGTCTGCTCATCTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: IHKIHDLPKPNLCYWDSVKWQVF*SAHLSV
Trigger: CACTGAAAGATGAGCAGACAAGAAAACTTGCCATTT...CACAGAATCCCAGTAGCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp CTGATATTAGTTGCGGGGAGGGCAGTCAGTAAAATCTTTCATAAATaGACACATGGTATCATATGTGGTATCTATCACATTTGCCCTCAA +
Preference number: 5 (lower is better)
Translates to: LILVAGRAVSKIFHK*THGIICGIYHICPQ
Trigger: TTGAGGGCAAATGTGATAGATACCACATATGATACCATGTGTTCATTTATGAAAGATTTTACTGACTGCCCTCCCCGCAACTAATATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS TCA 90 bp CTTCATACCCTGAAGCTTTATATATTTATCTTATCTCTCCGGTCCTaGGTTTGCTGCTCCTGGAAAGATTTCTTCTTCCGCATGATTAAT +
Preference number: 5 (lower is better)
Translates to: LHTLKLYIFILSLRS*VCCSWKDFFFRMIN
Trigger: ATTAATCATGCGGAAGAAGAAATCTTTCCAGGAGCAGCAAACTCAGGACCGGAGAGATAAGATAAATATATAAAGCTTCAGGGTATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541186.5
CDS CCA 90 bp TGGGCAGAAAAACATCAATATCCTAAATTTGTGCAAGAATCATCTTaGGAACAACAGGCTGGATCTTGGATTTTCTTGATTCCCAAAGCT +
Preference number: 5 (lower is better)
Translates to: WAEKHQYPKFVQESS*EQQAGSWIFLIPKA
Trigger: AGCTTTGGGAATCAAGAAAATCCAAGATCCAGCCTGTTGTTCCCAAGATGATTCTTGCACAAATTTAGGATATTGATGTTTTTCTGCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS-3UTR CAA 90 bp TGTAAGGCTGCGGATATTGTGTCTCTCTCCCCCTTGGCATTTATTATTATTATTAAATGGCAAGTTTTCTaGTCTGCTCATCTTTCAGTG +
Preference number: 5 (lower is better)
Translates to: CKAADIVSLSPLAFIIIIKWQVF*SAHLSV
Trigger: CACTGAAAGATGAGCAGACAAGAAAACTTGCCATTT...AATAATAATAATAAATGCCAAGGGGGAGAGAGACACAATATCCGCAGCCTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS TCA 90 bp GAAACTTTGTACAATACTAAAAAGGAACTGCAGATAAAAACAGCGTaGTCTGGGTGCCACACATTACTATCAGTATTGCAAGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ETLYNTKKELQIKTA*SGCHTLLSVLQAEV
Trigger: TACTTCAGCTTGCAATACTGATAGTAATGTGTGGCACCCAGATCACGCTGTTTTTATCTGCAGTTCCTTTTTAGTATTGTACAAAGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419821.6
ENST00000541878.5
CDS TCA 90 bp TTATTTATTGATGATGATGGACATCAGAGTAATGAGAGAGGGAGATaGAGAAATAGGCACAGATGTAGCCTGTGTAGTCCTTTGTTACTT +
Preference number: 5 (lower is better)
Translates to: LFIDDDGHQSNERGR*RNRHRCSLCSPLLL
Trigger: AAGTAACAAAGGACTACACAGGCTACATCTGTGCCTATTTCTTCATCTCCCTCTCTCATTACTCTGATGTCCATCATCATCAATAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGAAGTTCTCTTTATGTTaGGAGATCCGCTCTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVKFSLC*EIRSCF
Trigger: GAAGCAAGAGCGGATCTCCAAACATAAAGAGAACTT...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCACAAAATACACGATTaGCCAAAGCCCAATTTGTGC +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVHKIHD*PKPNLC
Trigger: GCACAAATTGGGCTTTGGCAAATCGTGTATTTTGTG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS-3UTR CAA 90 bp TCTGTGAGCTCCTTAAGTGTATTCACATCCTCTGCAACAGCAGAAAATGATTATACAACTCACCATCTCTaGATAATGAAGAAAAGGCAA +
Preference number: 5 (lower is better)
Translates to: SVSSLSVFTSSATAENDYTTHHL*IMKKRQ
Trigger: TTGCCTTTTCTTCATTATCAAGAGATGGTGAGTTGT...ATAATCATTTTCTGCTGTTGCAGAGGATGTGAATACACTTAAGGAGCTCACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419821.6
CDS TCA 90 bp TTTAAGATTGTTTTGTGCTCATTCTTTGGAGTAACTTCCAACTGGTaGTTCTTGAGTGCTTTATACTGTTTGGTCTGTACTTTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: FKIVLCSFFGVTSNW*FLSALYCLVCTLQV
Trigger: CACTTGCAAAGTACAGACCAAACAGTATAAAGCACTCAAGAATCACCAGTTGGAAGTTACTCCAAAGAATGAGCACAAAACAATCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537569.1
ENST00000537952.1
ENST00000543709.5
CDS GCA 90 bp TTTAAAGATGAAGAAGCCTGCCTTATATTTATGGATCTCTCTACATaGTGCCCACTCTTACTTTTCCTTCTTAACCCAATTTCTGAATCT +
Preference number: 5 (lower is better)
Translates to: FKDEEACLIFMDLST*CPLLLFLLNPISES
Trigger: AGATTCAGAAATTGGGTTAAGAAGGAAAAGTAAGAGTGGGCAGCATGTAGAGAGATCCATAAATATAAGGCAGGCTTCTTCATCTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS-3UTR CAA 90 bp TCCTTAAATTCCTTCTATACACAAAATACACGATTTGCCAAAGCCCAATTTGTGCTTTACTTTCACAGATaGGTGGTAATGAGTGATTGC +
Preference number: 5 (lower is better)
Translates to: SLNSFYTQNTRFAKAQFVLYFHR*VVMSDC
Trigger: GCAATCACTCATTACCACCAATCTGTGAAAGTAAAG...CACAAATTGGGCTTTGGCAAATCGTGTATTTTGTGTATAGAAGGAATTTAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392533.8
ENST00000419821.6
CDS GCA 72 bp CCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGGCGTTaGGTCCCACTCTCCACGCAGGACCCCGCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: PAVRSLCSRSRR*VPLSTQDPAAR
Trigger: CCGGGCGGCGGGGTCCTGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CAA 72 bp TCCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGGCGTaGCGTCCCACTCTCCACGCAGGACCCCGCCGCCCG +
Preference number: 6 (lower is better)
Translates to: SGCAQPLLAVSA*RPTLHAGPRRP
Trigger: CGGGCGGCGGGGTCCTGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CAA 90 bp AGTGCCGGATCCGGCTGTGCGCAGCCTCTGCTCGCGGTCTCGGCGTaGCGTCCCACTCTCCACGCAGGACCCCGCCGCCCGGCGCCACAA +
Preference number: 6 (lower is better)
Translates to: SAGSGCAQPLLAVSA*RPTLHAGPRRPAPQ
Trigger: TTGTGGCGCCGGGCGGCGGGGTCCTGCGTGGAGAGTGGGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS GCA 72 bp TCCTTGGGTCCGGTCGCTGAGTGCCGGATCCGGCTGTaGGCAGCCTCTGCTCGCGGTCTCGGCGTTGCGTCC +
Preference number: 6 (lower is better)
Translates to: SLGPVAECRIRL*AASARGLGVAS
Trigger: GGACGCAACGCCGAGACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS TCA 72 bp TGGCTTGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTaGGTGCCGGATCCGGCTGTGCGCAGCCTCTGCTCG +
Preference number: 6 (lower is better)
Translates to: WLVPRRILGSGR*VPDPAVRSLCS
Trigger: CGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS GCA 72 bp TTGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTGAGTaGCGGATCCGGCTGTGCGCAGCCTCTGCTCGCGGT +
Preference number: 6 (lower is better)
Translates to: LFPGGSLGPVAE*RIRLCAASARG
Trigger: ACCGCGAGCAGAGGCTGCGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CCA 72 bp AGTCGCTCTCCTGTGGCTTGTTCCCCGGCGGATCCTTaGGTCCGGTCGCTGAGTGCCGGATCCGGCTGTGCG +
Preference number: 6 (lower is better)
Translates to: SRSPVACSPADP*VRSLSAGSGCA
Trigger: CGCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGAGAGCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CAA 72 bp GAGTCGCTCTCCTGTGGCTTGTTCCCCGGCGGATCCTaGGGTCCGGTCGCTGAGTGCCGGATCCGGCTGTGC +
Preference number: 6 (lower is better)
Translates to: ESLSCGLFPGGS*GPVAECRIRLC
Trigger: GCACAGCCGGATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGAGAGCGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS TCA 72 bp CTCTCTGTTCCGGTAGTGGAGGGCCTGGCTCTGAACTaGCTGGGTAGGCCGCGGCTCAGGCCTGGGATCGCC +
Preference number: 6 (lower is better)
Translates to: LSVPVVEGLALN*LGRPRLRPGIA
Trigger: GGCGATCCCAGGCCTGAGCCGCGGCCTACCCAGTCAGTTCAGAGCCAGGCCCTCCACTACCGGAACAGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS CAA 90 bp GCCGCTTCCTCTCCCACACTTGTTCCTGAGTCGCTCTCCTGTGGCTaGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTGAGTGCCGGATC +
Preference number: 6 (lower is better)
Translates to: AASSPTLVPESLSCG*FPGGSLGPVAECRI
Trigger: GATCCGGCACTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGAGAGCGACTCAGGAACAAGTGTGGGAGAGGAAGCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CAA 72 bp TCTCCCACACTTGTTCCTGAGTCGCTCTCCTGTGGCTaGTTCCCCGGCGGATCCTTGGGTCCGGTCGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPTLVPESLSCG*FPGGSLGPVAE
Trigger: CTCAGCGACCGGACCCAAGGATCCGCCGGGGAACAAGCCACAGGAGAGCGACTCAGGAACAAGTGTGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000542532.5
ENST00000542692.1
CDS CCA 72 bp TGCTTCCTATGCCTTCCCCAGGGGCCATTCTGGACGTaGGTCATAAGGCTCCAAATGCTGCCATCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: CFLCLPQGPFWT*VIRLQMLPSQG
Trigger: GCCCTGGGATGGCAGCATTTGGAGCCTTATGACCCACGTCCAGAATGGCCCCTGGGGAAGGCATAGGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 72 bp ACTGCGGACACAGAAGACACACACGGTCATGCACCCTaGCCTACAGCCCTTGGTGGCCTACAGCCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: TADTEDTHGHAP*PTALGGLQPLV
Trigger: CACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTGTGTGTCTTCTGTGTCCGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CAA 90 bp CTAGCCGTAACTGCGGACACAGAAGACACACACGGTCATGCACCCTaGCCTACAGCCCTTGGTGGCCTACAGCCCTTGGTGACTACTGGA +
Preference number: 6 (lower is better)
Translates to: LAVTADTEDTHGHAP*PTALGGLQPLVTTG
Trigger: TCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTGTGTGTCTTCTGTGTCCGCAGTTACGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CAA 90 bp CTGCTCTGGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTaGCTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTGGTTCCATGT +
Preference number: 6 (lower is better)
Translates to: LLWLPVLTDMLGMEW*LPRLSISLFRLVPC
Trigger: ACATGGAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS TCA 72 bp CAGGCCTGGGATCGCCGTGGCCCGCCTCATCCCTTATaGATACATGATCTTTCTTATGCACGACGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: QAWDRRGPPHPL*IHDLSYARRRS
Trigger: GCTCCTCCGTCGTGCATAAGAAAGATCATGTATTCATAAGGGATGAGGCGGGCCACGGCGATCCCAGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
CDS GCA 72 bp TGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTTaGTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTGG +
Preference number: 6 (lower is better)
Translates to: CLCSRTCLEWNG*CPGCPFPCSGW
Trigger: CCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 72 bp CCTGCATGCTGTTCACACTGCTGCTCTGGCTGCCTGTaGTCACGGACATGCTTGGAATGGAATGGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: PACCSHCCSGCL*SRTCLEWNGCC
Trigger: GCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGTGTGAACAGCATGCAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 72 bp AAGGAGAAAGTCCAGCTGTGCTCTTTCCTCGCCGGCTaGCTCTCTCTCACCCCTCTTTCTGCACAAGCACTG +
Preference number: 6 (lower is better)
Translates to: KEKVQLCSFLAG*LSLTPLSAQAL
Trigger: CAGTGCTTGTGCAGAAAGAGGGGTGAGAGAGAGGCAGCCGGCGAGGAAAGAGCACAGCTGGACTTTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537952.1
CDS CCA 72 bp TGGCTGCCTGTGCTCACGGACATGCTTGGAATGGAATaGTTGCTGCCCAGGCTGTCCATTTCCCTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: WLPVLTDMLGME*LLPRLSISLFR
Trigger: CCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS CCA 72 bp ACTGCTGCTCTGGCTGCCTGTGCTCACGGACATGCTTaGAATGGAATGGTTGCTGCCCAGGCTGTCCATTTC +
Preference number: 6 (lower is better)
Translates to: TAALAACAHGHA*NGMVAAQAVHF
Trigger: GAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAGCCAGAGCAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS CCA 72 bp CACACACGGTCATGCACCCTTGCCTACAGCCCTTGGTaGCCTACAGCCCTTGGTGACTACTGGAAGAGGTTT +
Preference number: 6 (lower is better)
Translates to: HTRSCTLAYSPW*PTALGDYWKRF
Trigger: AAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CAA 72 bp CTGCCTGTGCTCACGGACATGCTTGGAATGGAATGGTaGCTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LPVLTDMLGMEW*LPRLSISLFRL
Trigger: CAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 72 bp CTGTGCTCACGGACATGCTTGGAATGGAATGGTTGCTaGCCAGGCTGTCCATTTCCCTGTTCAGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: LCSRTCLEWNGC*PGCPFPCSGWF
Trigger: GAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACCATTCCATTCCAAGCATGTCCGTGAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS GCA 72 bp ATCAGATCCATGCGTAGCTTCTGTAACGTGTGCAGCTaGCTGTACTCTAGCTCTCGGGTGGACTCGTCGTGC +
Preference number: 6 (lower is better)
Translates to: IRSMRSFCNVCS*LYSSSRVDSSC
Trigger: GCACGACGAGTCCACCCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CAA 72 bp TTCTTGGCCAGCTTCTCCAGCTCGATGGACGAGTTGTaGGCATGCGTCTCCACCTCCTTCTGTAGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: FLASFSSSMDEL*ACVSTSFCSLR
Trigger: CCTCAAGCTACAGAAGGAGGTGGAGACGCATGCCAACAACTCGTCCATCGAGCTGGAGAAGCTGGCCAAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CAA 72 bp TGCTTCTTGGCCAGCTTCTCCAGCTCGATGGACGAGTaGTTGGCATGCGTCTCCACCTCCTTCTGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: CFLASFSSSMDE*LACVSTSFCSL
Trigger: CAAGCTACAGAAGGAGGTGGAGACGCATGCCAACAACTCGTCCATCGAGCTGGAGAAGCTGGCCAAGAAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS GCA 72 bp AAACGGATCAGATCCATGCGTAGCTTCTGTAACGTGTaGAGCTGCCTGTACTCTAGCTCTCGGGTGGACTCG +
Preference number: 6 (lower is better)
Translates to: KRIRSMRSFCNV*SCLYSSSRVDS
Trigger: CGAGTCCACCCGAGAGCTAGAGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGATCCGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS GCA 72 bp CCAGCTCCTCTTCAATCTTCTGCTCAAGGTGTGCTCTaGGCAGAGACACTCTCTGCTCTAGCTTCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: PAPLQSSAQGVL*AETLSALASGA
Trigger: AGCTCCAGAAGCTAGAGCAGAGAGTGTCTCTGCGCAGAGCACACCTTGAGCAGAAGATTGAAGAGGAGCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536979.1
ENST00000537305.5
ENST00000537952.1
ENST00000543709.5
CDS CCA 72 bp CATATTTGCTTCCTATGCCTTCCCCAGGGGCCATTCTaGACGTGGGTCATAAGGCTCCAAATGCTGCCATCC +
Preference number: 6 (lower is better)
Translates to: HICFLCLPQGPF*TWVIRLQMLPS
Trigger: GGATGGCAGCATTTGGAGCCTTATGACCCACGTCCAGAATGGCCCCTGGGGAAGGCATAGGAAGCAAATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 72 bp GGTTGCTGCCCAGGCTGTCCATTTCCCTGTTCAGGCTaGTTCCATGTTCACTGTCCTGTAAAAATGGGGCAC +
Preference number: 6 (lower is better)
Translates to: GCCPGCPFPCSG*FHVHCPVKMGH
Trigger: GTGCCCCATTTTTACAGGACAGTGAACATGGAACCAGCCTGAACAGGGAAATGGACAGCCTGGGCAGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 90 bp GTCAGGAAGGCTACACCTGTGGGCTTTGGAGGTAGGCTCCTGGGCTaGAATTACAGCTACACCATCCACTTTGTGTGTGTCACACCTTGG +
Preference number: 6 (lower is better)
Translates to: VRKATPVGFGGRLLG*NYSYTIHFVCVTPW
Trigger: CCAAGGTGTGACACACACAAAGTGGATGGTGTAGCTGTAATTCAAGCCCAGGAGCCTACCTCCAAAGCCCACAGGTGTAGCCTTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS GCA 72 bp CCAGTTCCGTCTGGTGCTGTAAACGGATCAGATCCATaGGTAGCTTCTGTAACGTGTGCAGCTGCCTGTACT +
Preference number: 6 (lower is better)
Translates to: PVPSGAVNGSDP*VASVTCAAACT
Trigger: AGTACAGGCAGCTGCACACGTTACAGAAGCTACGCATGGATCTGATCCGTTTACAGCACCAGACGGAACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS GCA 72 bp CAATGTAGGCTTGTGCTGAACTGCCTCTCTATCTTGTaGTGGGAAGATTCGGCAGTCACTGAGGGATCCTGC +
Preference number: 6 (lower is better)
Translates to: QCRLVLNCLSIL*WEDSAVTEGSC
Trigger: GCAGGATCCCTCAGTGACTGCCGAATCTTCCCAGCACAAGATAGAGAGGCAGTTCAGCACAAGCCTACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS CAA 90 bp CACGGTCATGCACCCTTGCCTACAGCCCTTGGTGGCCTACAGCCCTaGGTGACTACTGGAAGAGGTTTCCTCATTTGGATTGAAATTGGT +
Preference number: 6 (lower is better)
Translates to: HGHAPLPTALGGLQP*VTTGRGFLIWIEIG
Trigger: ACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGGGTGCATGACCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS TCA 72 bp AGCAACACATTGCAGCCTTCAGTTAGGAATGTCAGCTaGTCGCTAGTGGGATGCCTTCTGAATCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SNTLQPSVRNVS*SLVGCLLNPWQ
Trigger: CTGCCAGGGATTCAGAAGGCATCCCACTAGCGATCAGCTGACATTCCTAACTGAAGGCTGCAATGTGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537952.1
CDS TCA 72 bp CCTTGCCTACAGCCCTTGGTGGCCTACAGCCCTTGGTaGCTACTGGAAGAGGTTTCCTCATTTGGATTGAAA +
Preference number: 6 (lower is better)
Translates to: PCLQPLVAYSPW*LLEEVSSFGLK
Trigger: TTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTGTAGGCCACCAAGGGCTGTAGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS GCA 72 bp TTGTGCTGGGAAGATTCGGCAGTCACTGAGGGATCCTaGTTTCCAGTCATGATCGTACACAGTTCTAGCACC +
Preference number: 6 (lower is better)
Translates to: LCWEDSAVTEGS*FPVMIVHSSST
Trigger: GGTGCTAGAACTGTGTACGATCATGACTGGAAAGCAGGATCCCTCAGTGACTGCCGAATCTTCCCAGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537822.1
ENST00000537952.1
CDS CCA 72 bp TGTAGGCTTGTGCTGAACTGCCTCTCTATCTTGTGCTaGGAAGATTCGGCAGTCACTGAGGGATCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CRLVLNCLSILC*EDSAVTEGSCF
Trigger: AAAGCAGGATCCCTCAGTGACTGCCGAATCTTCCCAGCACAAGATAGAGAGGCAGTTCAGCACAAGCCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS CAA 72 bp AACCAATGTAGGCTTGTGCTGAACTGCCTCTCTATCTaGTGCTGGGAAGATTCGGCAGTCACTGAGGGATCC +
Preference number: 6 (lower is better)
Translates to: NQCRLVLNCLSI*CWEDSAVTEGS
Trigger: GGATCCCTCAGTGACTGCCGAATCTTCCCAGCACAAGATAGAGAGGCAGTTCAGCACAAGCCTACATTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS TCA 72 bp CAGGCCTGGGATCGCCGTGGCCCGCCTCATCCCTTATaGATACATGATCCTCCAGAATTACATATATGCAAA +
Preference number: 6 (lower is better)
Translates to: QAWDRRGPPHPL*IHDPPELHICK
Trigger: TTTGCATATATGTAATTCTGGAGGATCATGTATTCATAAGGGATGAGGCGGGCCACGGCGATCCCAGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537822.1
CDS TCA 72 bp CAGGCCTGGGATCGCCGTGGCCCGCCTCATCCCTTATaGATACATGATCTCCTTAGAACAGTTTGCTTAAAA +
Preference number: 6 (lower is better)
Translates to: QAWDRRGPPHPL*IHDLLRTVCLK
Trigger: TTTTAAGCAAACTGTTCTAAGGAGATCATGTATTCATAAGGGATGAGGCGGGCCACGGCGATCCCAGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540561.5
CDS GCA 72 bp ACGGAGGAGCTGGAATTGATTGTGCTTTCGTCATCGTaGATCATGACAAGTTCGGAACTGCTCTCGTCCATG +
Preference number: 6 (lower is better)
Translates to: TEELELIVLSSS*IMTSSELLSSM
Trigger: CATGGACGAGAGCAGTTCCGAACTTGTCATGATGCACGATGACGAAAGCACAATCAATTCCAGCTCCTCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000536584.1
ENST00000537305.5
CDS TCA 72 bp ATCATCGTTCTGCCTAGAACCAATGTAGGCTTGTGCTaGACTGCCTCTCTATCTTGTGCTGGGAAGATTCGG +
Preference number: 6 (lower is better)
Translates to: IIVLPRTNVGLC*TASLSCAGKIR
Trigger: CCGAATCTTCCCAGCACAAGATAGAGAGGCAGTTCAGCACAAGCCTACATTGGTTCTAGGCAGAACGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537822.1
ENST00000537952.1
ENST00000540561.5
CDS GCA 72 bp ACCTCTGTGGAGGGTACCAAGAAACCTACTTTCTTATaGACGACGGAGGAGCTGGAATTGATTGTGCTTTCG +
Preference number: 6 (lower is better)
Translates to: TSVEGTKKPTFL*TTEELELIVLS
Trigger: CGAAAGCACAATCAATTCCAGCTCCTCCGTCGTGCATAAGAAAGTAGGTTTCTTGGTACCCTCCACAGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 72 bp TCCTTTGTATTTATGATGCAACCATGTTGGCCGGGATaGTCTCAATCTCTTGACCTCGTGATCCGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: SFVFMMQPCWPG*SQSLDLVIRLP
Trigger: AGGCAGACGGATCACGAGGTCAAGAGATTGAGACCATCCCGGCCAACATGGTTGCATCATAAATACAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539872.5
CDS CAA 72 bp TCATCTTGGGAACAACAGGCTGGATCTTGGATTTTCTaGATTCCCAAAGCTCTCGAAGCCGTGGCACCAAAC +
Preference number: 6 (lower is better)
Translates to: SSWEQQAGSWIF*IPKALEAVAPN
Trigger: GTTTGGTGCCACGGCTTCGAGAGCTTTGGGAATCAAGAAAATCCAAGATCCAGCCTGTTGTTCCCAAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 90 bp GTGCAAGAATCATCTTGGGAACAACAGGCTGGATCTTGGATTTTCTaGATTCCCAAAGCTCTCGAAGCCGTGGCACCAAACCTAACCACT +
Preference number: 6 (lower is better)
Translates to: VQESSWEQQAGSWIF*IPKALEAVAPNLTT
Trigger: AGTGGTTAGGTTTGGTGCCACGGCTTCGAGAGCTTTGGGAATCAAGAAAATCCAAGATCCAGCCTGTTGTTCCCAAGATGATTCTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 90 bp GGTACCAAGAAACCTACTTTCTTATGCACGACGGAGGAGCTGGAATaGATTGTGCTTTCGTCATCGTGCATCATGACAAGTTCGGAACTG +
Preference number: 6 (lower is better)
Translates to: GTKKPTFLCTTEELE*IVLSSSCIMTSSEL
Trigger: CAGTTCCGAACTTGTCATGATGCACGATGACGAAAGCACAATCAATTCCAGCTCCTCCGTCGTGCATAAGAAAGTAGGTTTCTTGGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp CTATGTGCCACAGGTCTGATGTGGCATGTCACTCCTTaGGTTCCATCTTATAAGACACTCCAGCAAGTATCC +
Preference number: 6 (lower is better)
Translates to: LCATGLMWHVTP*VPSYKTLQQVS
Trigger: GGATACTTGCTGGAGTGTCTTATAAGATGGAACTCAAGGAGTGACATGCCACATCAGACCTGTGGCACATAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS TCA 72 bp CACATTTGCCCTCAAAGTCCCTATGTGCCACAGGTCTaGTGTGGCATGTCACTCCTTGAGTTCCATCTTATA +
Preference number: 6 (lower is better)
Translates to: HICPQSPYVPQV*CGMSLLEFHLI
Trigger: TATAAGATGGAACTCAAGGAGTGACATGCCACATCAGACCTGTGGCACATAGGGACTTTGAGGGCAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS TCA 72 bp AAGGAGCTAGAGGAAGACTGCTGGCCACTAAACAGGTaGGCTCTAGGATATCTTCAAATACAGCAGTGGTCA +
Preference number: 6 (lower is better)
Translates to: KELEEDCWPLNR*ALGYLQIQQWS
Trigger: TGACCACTGCTGTATTTGAAGATATCCTAGAGCTCACCTGTTTAGTGGCCAGCAGTCTTCCTCTAGCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 72 bp TTTAGTTCCTCCCGAATGTTCTGCTGCTCCACCTCGTaGCGCTTGATCATTATTTTCCGCTTGAAGAAACGA +
Preference number: 6 (lower is better)
Translates to: FSSSRMFCCSTS*RLIIIFRLKKR
Trigger: TCGTTTCTTCAAGCGGAAAATAATGATCAAGCGGCACGAGGTGGAGCAGCAGAACATTCGGGAGGAACTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS GCA 72 bp GTCCTCTTTTTATTTAGTTCCTCCCGAATGTTCTGCTaGTCCACCTCGTGCCGCTTGATCATTATTTTCCGC +
Preference number: 6 (lower is better)
Translates to: VLFLFSSSRMFC*STSCRLIIIFR
Trigger: GCGGAAAATAATGATCAAGCGGCACGAGGTGGAGCAGCAGAACATTCGGGAGGAACTAAATAAAAAGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 72 bp GTGCAAGAATCATCTTGGGAACAACAGGCTGGATCTTaGATTTTCTTGATTCCCAAAGCTCTCGAAGCCGTG +
Preference number: 6 (lower is better)
Translates to: VQESSWEQQAGS*IFLIPKALEAV
Trigger: CACGGCTTCGAGAGCTTTGGGAATCAAGAAAATCCAAGATCCAGCCTGTTGTTCCCAAGATGATTCTTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 72 bp TCCTCCCGAATGTTCTGCTGCTCCACCTCGTGCCGCTaGATCATTATTTTCCGCTTGAAGAAACGACAATTT +
Preference number: 6 (lower is better)
Translates to: SSRMFCCSTSCR*IIIFRLKKRQF
Trigger: AAATTGTCGTTTCTTCAAGCGGAAAATAATGATCAAGCGGCACGAGGTGGAGCAGCAGAACATTCGGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CAA 90 bp CCTAAAGCACAACACCTTTCTGAGTCTAGAACACCCTATGCCCATTaGTCAGAAACTACCCACATCATGTCCTCCAGGAAACCTTCACTA +
Preference number: 6 (lower is better)
Translates to: PKAQHLSESRTPYAH*SETTHIMSSRKPSL
Trigger: TAGTGAAGGTTTCCTGGAGGACATGATGTGGGTAGTTTCTGACAAATGGGCATAGGGTGTTCTAGACTCAGAAAGGTGTTGTGCTTTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp TCTAAAGTGCTCCCTTTTCCCCATTTGCATCGACACTaGCCTTATTACCTCTTGCATGGACTATTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: SKVLPFPHLHRH*PYYLLHGLLAR
Trigger: CCTGGCTAATAGTCCATGCAAGAGGTAATAAGGTCAGTGTCGATGCAAATGGGGAAAAGGGAGCACTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp TGGAAGCTAAGTGACTTGAACTGGATTCGCTATGATTaGCAAAGCTCACCTCTGTGGAGGGTACCAAGAAAC +
Preference number: 6 (lower is better)
Translates to: WKLSDLNWIRYD*QSSPLWRVPRN
Trigger: GTTTCTTGGTACCCTCCACAGAGGTGAGCTTTGTCAATCATAGCGAATCCAGTTCAAGTCACTTAGCTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 72 bp GTTGTCAAATCTTTCTTCTGCTGGGCCAAGATCTGTTaGTGGAACTTCTTCTCATCTGCTGCAGCTACCTTT +
Preference number: 6 (lower is better)
Translates to: VVKSFFCWAKIC*WNFFSSAAATF
Trigger: AAAGGTAGCTGCAGCAGATGAGAAGAAGTTCCAGCAACAGATCTTGGCCCAGCAGAAGAAAGATTTGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CCA 72 bp CAGCCCTTGGTGACTACTGGAAGAGGTTTCCTCATTTaGATTGAAATTGGTTGCCCCCTCAAAAACACAGAT +
Preference number: 6 (lower is better)
Translates to: QPLVTTGRGFLI*IEIGCPLKNTD
Trigger: ATCTGTGTTTTTGAGGGGGCAACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGTAGTCACCAAGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CAA 72 bp GAAGAAACGACAATTTTTGTCGTAGTACAGTCTCTGTaGAGTGAGAAGGTGGGCTTCCTCTTCAGCCTGTGT +
Preference number: 6 (lower is better)
Translates to: EETTIFVVVQSL*SEKVGFLFSLC
Trigger: ACACAGGCTGAAGAGGAAGCCCACCTTCTCACTCAACAGAGACTGTACTACGACAAAAATTGTCGTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537952.1
CDS CAA 72 bp CTCGAAGCCGTGGCACCAAACCTAACCACTTACCGCTaGAGAGGCCATCATTTCATTTATACTCTGTTCATA +
Preference number: 6 (lower is better)
Translates to: LEAVAPNLTTYR*RGHHFIYTLFI
Trigger: TATGAACAGAGTATAAATGAAATGATGGCCTCTCAAGCGGTAAGTGGTTAGGTTTGGTGCCACGGCTTCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 72 bp CAACACCTTTCTGAGTCTAGAACACCCTATGCCCATTaGTCAGAAACTACCCACATCATGTCCTCCAGGAAA +
Preference number: 6 (lower is better)
Translates to: QHLSESRTPYAH*SETTHIMSSRK
Trigger: TTTCCTGGAGGACATGATGTGGGTAGTTTCTGACAAATGGGCATAGGGTGTTCTAGACTCAGAAAGGTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 72 bp TTTGACTGCCTTCAGGCGGGACATGAACTCTTTCCTTaGCCTCAGTTTCTACTATGTGTATGGCTTCATACC +
Preference number: 6 (lower is better)
Translates to: FDCLQAGHELFP*PQFLLCVWLHT
Trigger: GGTATGAAGCCATACACATAGTAGAAACTGAGGCAAAGGAAAGAGTTCATGTCCCGCCTGAAGGCAGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541186.5
CDS GCA 72 bp TACGATGTTTCTCTAAAGTGCTCCCTTTTCCCCATTTaGATCGACACTGACCTTATTACCTCTTGCATGGAC +
Preference number: 6 (lower is better)
Translates to: YDVSLKCSLFPI*IDTDLITSCMD
Trigger: GTCCATGCAAGAGGTAATAAGGTCAGTGTCGATGCAAATGGGGAAAAGGGAGCACTTTAGAGAAACATCGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS GCA 72 bp ACTGGAAGAGGTTTCCTCATTTGGATTGAAATTGGTTaGCCCCTCAAAAACACAGATGCTCTGGGTACATTC +
Preference number: 6 (lower is better)
Translates to: TGRGFLIWIEIG*PLKNTDALGTF
Trigger: GAATGTACCCAGAGCATCTGTGTTTTTGAGGGGGCAACCAATTTCAATCCAAATGAGGAAACCTCTTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536979.1
CDS CCA 72 bp CCATTTGCATCGACACTGACCTTATTACCTCTTGCATaGACTATTAGCCAGGATGTTGCCCATTCAAATCCA +
Preference number: 6 (lower is better)
Translates to: PFASTLTLLPLA*TISQDVAHSNP
Trigger: TGGATTTGAATGGGCAACATCCTGGCTAATAGTCCATGCAAGAGGTAATAAGGTCAGTGTCGATGCAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 72 bp GTTCCATCTTATAAGACACTCCAGCAAGTATCCACATaGGCTTGGCTTTATTCAACGTCGTCCTTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: VPSYKTLQQVST*AWLYSTSSFPQ
Trigger: CTGAGGAAAGGACGACGTTGAATAAAGCCAAGCCAATGTGGATACTTGCTGGAGTGTCTTATAAGATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 72 bp AAACCTACTTTCTTATGCACGACGGAGGAGCTGGAATaGATTGTGCTTTCGTCATCGTGCATCATGACAAGT +
Preference number: 6 (lower is better)
Translates to: KPTFLCTTEELE*IVLSSSCIMTS
Trigger: ACTTGTCATGATGCACGATGACGAAAGCACAATCAATTCCAGCTCCTCCGTCGTGCATAAGAAAGTAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp TTTAACTATATCCCTTTCTTCTATCTTCGGTGCCTCTaGCTCTGCCCTGGCTCCATCTCTACTGCATTTAAA +
Preference number: 6 (lower is better)
Translates to: FNYIPFFYLRCL*LCPGSISTAFK
Trigger: TTTAAATGCAGTAGAGATGGAGCCAGGGCAGAGTCAGAGGCACCGAAGATAGAAGAAAGGGATATAGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 72 bp TTCCATCTTATAAGACACTCCAGCAAGTATCCACATTaGCTTGGCTTTATTCAACGTCGTCCTTTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: FHLIRHSSKYPH*LGFIQRRPFLS
Trigger: ACTGAGGAAAGGACGACGTTGAATAAAGCCAAGCCAATGTGGATACTTGCTGGAGTGTCTTATAAGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS CAA 72 bp ATGAACACATGGTATCATATGTGGTATCTATCACATTaGCCCTCAAAGTCCCTATGTGCCACAGGTCTGATG +
Preference number: 6 (lower is better)
Translates to: MNTWYHMWYLSH*PSKSLCATGLM
Trigger: CATCAGACCTGTGGCACATAGGGACTTTGAGGGCAAATGTGATAGATACCACATATGATACCATGTGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537569.1
CDS GCA 72 bp GATTATGAAATCTACCTCTACGATGTTTCTCTAAAGTaGTCCCTTTTCCCCATTTGCATCGACACTGACCTT +
Preference number: 6 (lower is better)
Translates to: DYEIYLYDVSLK*SLFPICIDTDL
Trigger: AAGGTCAGTGTCGATGCAAATGGGGAAAAGGGAGCACTTTAGAGAAACATCGTAGAGGTAGATTTCATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 90 bp GAAGAAATAGGCACAGATGTAGCCTGTGTAGTCCTTTGTTACTTTTaGACTGTAAGAAAACTGTCACATGCCAGGTTTAGTACCACACTG +
Preference number: 6 (lower is better)
Translates to: EEIGTDVACVVLCYF*TVRKLSHARFSTTL
Trigger: CAGTGTGGTACTAAACCTGGCATGTGACAGTTTTCTTACAGTCAAAAAGTAACAAAGGACTACACAGGCTACATCTGTGCCTATTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp AGTCACCTTAAACTCCTCCTTATCTGTCACTGTCAATaGGAAGCCATGGATTATGAAATCTACCTCTACGAT +
Preference number: 6 (lower is better)
Translates to: SHLKLLLICHCQ*EAMDYEIYLYD
Trigger: ATCGTAGAGGTAGATTTCATAATCCATGGCTTCTCATTGACAGTGACAGATAAGGAGGAGTTTAAGGTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp AGGTTTAGTACCACACTGCAGTTGCAAAAAGGTAACTaGAACATCTGGAAGCTAAGTGACTTGAACTGGATT +
Preference number: 6 (lower is better)
Translates to: RFSTTLQLQKGN*NIWKLSDLNWI
Trigger: AATCCAGTTCAAGTCACTTAGCTTCCAGATGTTTCAGTTACCTTTTTGCAACTGCAGTGTGGTACTAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS TCA 72 bp TTTTGGAGCCTAAACAAACCTGCAATGATTCCGTATTaGCCACCTACCAATAAACCTCAACTACACACATAC +
Preference number: 6 (lower is better)
Translates to: FWSLNKPAMIPY*PPTNKPQLHTY
Trigger: GTATGTGTGTAGTTGAGGTTTATTGGTAGGTGGTCAATACGGAATCATTGCAGGTTTGTTTAGGCTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537305.5
CDS GCA 72 bp GAAGAAGCCTGCCTTATATTTATGGATCTCTCTACATaGTGCCCACTCTTACTTTTCCTTCTTAACCCAATT +
Preference number: 6 (lower is better)
Translates to: EEACLIFMDLST*CPLLLFLLNPI
Trigger: AATTGGGTTAAGAAGGAAAAGTAAGAGTGGGCAGCATGTAGAGAGATCCATAAATATAAGGCAGGCTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CCA 72 bp CTGCATTTAAAGATGAAGAAGCCTGCCTTATATTTATaGATCTCTCTACATGCTGCCCACTCTTACTTTTCC +
Preference number: 6 (lower is better)
Translates to: LHLKMKKPALYL*ISLHAAHSYFS
Trigger: GGAAAAGTAAGAGTGGGCAGCATGTAGAGAGATCCATAAATATAAGGCAGGCTTCTTCATCTTTAAATGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536584.1
CDS CAA 72 bp GCTTTATATATTTATCTTATCTCTCCGGTCCTGAGTTaGCTGCTCCTGGAAAGATTTCTTCTTCCGCATGAT +
Preference number: 6 (lower is better)
Translates to: ALYIYLISPVLS*LLLERFLLPHD
Trigger: ATCATGCGGAAGAAGAAATCTTTCCAGGAGCAGCAAACTCAGGACCGGAGAGATAAGATAAATATATAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541186.5
CDS TCA 72 bp GTTTTGTGCTCATTCTTTGGAGTAACTTCCAACTGGTaGTTCTTGAGTGCTTTATACTGTTTGGTCTGTACT +
Preference number: 6 (lower is better)
Translates to: VLCSFFGVTSNW*FLSALYCLVCT
Trigger: AGTACAGACCAAACAGTATAAAGCACTCAAGAATCACCAGTTGGAAGTTACTCCAAAGAATGAGCACAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537569.1
ENST00000537952.1
ENST00000543709.5
CDS GCA 72 bp ATTCTTTGGAGTAACTTCCAACTGGTGATTCTTGAGTaGTTTATACTGTTTGGTCTGTACTTTGCAAGTGTC +
Preference number: 6 (lower is better)
Translates to: ILWSNFQLVILE*FILFGLYFASV
Trigger: GACACTTGCAAAGTACAGACCAAACAGTATAAAGCACTCAAGAATCACCAGTTGGAAGTTACTCCAAAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000392533.8
ENST00000419821.6
ENST00000537305.5
ENST00000537569.1
ENST00000537952.1
ENST00000543709.5
CDS TCA 72 bp TACAATACTAAAAAGGAACTGCAGATAAAAACAGCGTaGTCTGGGTGCCACACATTACTATCAGTATTGCAA +
Preference number: 6 (lower is better)
Translates to: YNTKKELQIKTA*SGCHTLLSVLQ
Trigger: TTGCAATACTGATAGTAATGTGTGGCACCCAGATCACGCTGTTTTTATCTGCAGTTCCTTTTTAGTATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000419821.6
ENST00000541878.5
CDS CCA 72 bp TCTACTAGCTTTTTATTACTTCATCCCTTTAAGCCTTaGTTTCTCACAGTAGATCTCAAACGCATGTCCTAT +
Preference number: 6 (lower is better)
Translates to: STSFLLLHPFKP*FLTVDLKRMSY
Trigger: ATAGGACATGCGTTTGAGATCTACTGTGAGAAACCAAGGCTTAAAGGGATGAAGTAATAAAAAGCTAGTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539872.5