RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAOK2 (Homo sapiens)

Ensembl gene IDs: ENSG00000149930

Ensembl transcript IDs: ENST00000279394.7, ENST00000308893.9, ENST00000416441.2, ENST00000543033.5, ENST00000566552.1, ENST00000570844.1

Found 761 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTaGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCC +
Preference number: 1 (lower is better)
Translates to: GLDEYLTRTSPSFPR*RRETPGTMVGRRGS
Trigger: GGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR TCA 90 bp CGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGAGGAAGGTGGGTaGAAAGAGAGGACTAGGGACTGGAGAAACTTCACTGAGTCGTGG +
Preference number: 1 (lower is better)
Translates to: RRAGPGVSEQTEEGG*KERTRDWRNFTESW
Trigger: CCACGACTCAGTGAAGTTTCTCCAGTCCCTAGTCCTCTCTTTTCACCCACCTTCCTCAGTTTGCTCACTTACCCCAGGCCCAGCCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR-3UTR CCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGCTGGCCCTGGGCCACTaGCCAGCCCCAAGAAGCTCA +
Preference number: 2 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQLALGH*PAPRSS
Trigger: TGAGCTTCTTGGGGCTGGCCAGTGGCCCAGGGCCAG...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACCTTGTCCCCTACCCTTaGAGGGGCCTCCAGCTCAGT +
Preference number: 2 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHLVPYP*RGLQLS
Trigger: ACTGAGCTGGAGGCCCCTGCAAGGGTAGGGGACAAG...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR TCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGCTCCCAGGCAGCCTTaGGGCACCTATCGCCAAGCT +
Preference number: 2 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGAPRQP*GTYRQA
Trigger: AGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTCGCCAAGCTGGCCCTaGGCCACTGGCCAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRSPSWP*ATGQPQ
Trigger: TTGGGGCTGGCCAGTGGCCCAGGGCCAGCTTGGCGA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGGCCTCCAGCTCAGTaGCCTCCAGGGTCAGGCTCC +
Preference number: 2 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPGPPAQ*PPGSGS
Trigger: GGAGCCTGACCCTGGAGGGCACTGAGCTGGAGGCCC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGAGGACTAGGGACTaGAGAAACTTCACTGAGTCG +
Preference number: 2 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSERTRD*RNFTES
Trigger: CGACTCAGTGAAGTTTCTCCAGTCCCTAGTCCTCTC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR-3UTR TCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCAAGAAGCTCATGAGATaGGGAGGTCTGAGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: DPILILPASKVASHSPCLKKLMR*GGLRGA
Trigger: AGCTCCCCTCAGACCTCCTCATCTCATGAGCTTCTT...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTGGAGAAACTTCACTaGGTCGTGGGAGATAAAGTG +
Preference number: 2 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLEKLH*VVGDKV
Trigger: CACTTTATCTCCCACGACTCAGTGAAGTTTCTCCAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGCCCCAGACCTGCTCTaGCCTGTGGCAGGTCTGAGG +
Preference number: 2 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPAPDLL*PVAGLR
Trigger: CCTCAGACCTGCCACAGGGCAGAGCAGGTCTGGGGC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTGGAGAAACTTCACTaGGTCGTGGGAGATAAAGTG +
Preference number: 2 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLEKLH*VVGDKV
Trigger: CACTTTATCTCCCACGACTCAGTGAAGTTTCTCCAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTCTGAGGGGAGCTaGAGCCTACATCTTGTCCCC +
Preference number: 2 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPRSEGS*SLHLVP
Trigger: GGGGACAAGATGTAGGCTCCAGCTCCCCTCAGACCT...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAACTTCACTGAGTCGTaGGAGATAAAGTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQNFTES*EIKCSM
Trigger: CATTGAGCACTTTATCTCCCACGACTCAGTGAAGTT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR TCA 72 bp CCTGGGCCACTGGCCAGCCCCAAGAAGCTCATGAGATaGGGAGGTCTGAGGGGAGCTGGAGCCTACATCTTG +
Preference number: 3 (lower is better)
Translates to: PGPLASPKKLMR*GGLRGAGAYIL
Trigger: CAAGATGTAGGCTCCAGCTCCCCTCAGACCTCCTCATCTCATGAGCTTCTTGGGGCTGGCCAGTGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR CAA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTGGCTCCCAGGCAGCCTaGAGGCACCTATCGCCAAGC +
Preference number: 3 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPGSQAA*RHLSPS
Trigger: GCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
3UTR-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACTCAATGCTCTAGATTaGGGCTGGAAGGGCTGGAGT +
Preference number: 3 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLNALD*GWKGWS
Trigger: ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTCAATGCTCTAGATTaGGGCTGGAAGGGCTGGAGT +
Preference number: 3 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLNALD*GWKGWS
Trigger: ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
3UTR CCA 72 bp GAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTaGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGG +
Preference number: 3 (lower is better)
Translates to: EYLTRTSPSFPR*RRETPGTMVGR
Trigger: CCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGCCAGCCCCACAGCTaGGAGGGGCTCCCACGACTG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHCQPHS*EGLPRL
Trigger: CAGTCGTGGGAGCCCCTCTCAGCTGTGGGGCTGGCA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGGGGCCTCCAGCTCAGTaGCCTCCAGGGTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQGPPAQ*PPGSGS
Trigger: GGAGCCTGACCCTGGAGGGCACTGAGCTGGAGGCCC...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGGCGGGCGGAAGAGGTaGTGGAAGTGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHGGRKR*WKWELG
Trigger: CCCCAGCTCCCACTTCCACCACCTCTTCCGCCCGCC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCGTGCGCTGCACGGCCTaGAGCTGCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGVRCTA*SCRSSS
Trigger: GCTGGAGCTGCGGCAGCTCCAGGCCGTGCAGCGCAC...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTTCACCCCTCAGCCGTaGCTCCAGGGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHFTPQP*LQGQQL
Trigger: CAGCTGCTGGCCCTGGAGTCACGGCTGAGGGGTGAA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGCTCCCGCTGCAGCCGTaGACTGTGCTCCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQLPLQP*TVLLPF
Trigger: GAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAG...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCCAAAGCCAGCCCGCTaGGCCTCAAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGPKPAR*ASSSRC
Trigger: GCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACCAGCTTCAGCCGGGATaGCCCCCAGAGCCATGCTGG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHQLQPG*PPEPCW
Trigger: CCAGCATGGCTCTGGGGGGCATCCCGGCTGAAGCTG...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTCCGCCTGGCACTGCTaGAGCTGCTCCTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHSAWHC*SCSFCR
Trigger: GCGGCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTCTGGCTGGAGGCGCTaGTGGACATGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHSGWRR*WTCWAL
Trigger: CAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGTCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQSCSWI*RLTREA
Trigger: CGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQLRLLG*WRTWAA
Trigger: TGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGAGCTCAGCCACATCTaGGTCCTTCAGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHELSHI*VLQAPG
Trigger: GCCGGGAGCCTGAAGGACCCAGATGTGGCTGAGCTC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACCGGCACCAGGGCCGTTaGGTGCCTCTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHRHQGR*VPLGTG
Trigger: TCCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCG...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGCCCGCTTGGGAGTGCTaGGGTTCTCCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQPAWEC*GSPGAP
Trigger: AGGAGCTCCAGGAGAACCCCAGCACTCCCAAGCGGG...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCGCTTCCTCCTCCGCCTaGCACTGCTGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGASSSA*HCWSCS
Trigger: GGAGCAGCTCCAGCAGTGCCAGGCGGAGGAGGAAGC...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACCCCCCAGAGCCATGCTaGAGAAGCCCAGCCTCATGC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHPPEPC*RSPASC
Trigger: GCATGAGGCTGGGCTTCTCCAGCATGGCTCTGGGGG...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGTGGAGCTGTGAGAGGTaGCTGTGTGCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQWSCER*LCAPPP
Trigger: AGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCA...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGTGCTGCAGGCGGGTaGGCTCAGCCCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGAAGG*AQPACA
Trigger: AGCGCACGCGGGCTGAGCTCACCCGCCTGCAGCACC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTCTCCCGCTTGGGAGTaGTGGGGTTCTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHSPAWE*WGSPGA
Trigger: AGCTCCAGGAGAACCCCAGCACTCCCAAGCGGGAGA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATCAGCCCGCGTGCGCTaGACGGCCTGGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQSARVR*TAWSCR
Trigger: GCGGCAGCTCCAGGCCGTGCAGCGCACGCGGGCTGA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGCGAACCTGGGCCGCATaGTTCTGCCGCAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQRTWAA*FCRNSC
Trigger: GCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCG...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCCGGGACTGGCGGGTaGGTGACCTCCGCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPGTGG*VTSARL
Trigger: TAGCCGGGCGGAGGTCACGCACCCGCCAGTCCCGGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCGGCCTTCTCCCGCTTaGGAGTGCTGGGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGRPSPA*ECWGSP
Trigger: AGGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGGTGACAACCTAATCTaGCCTCGCGGTCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHGDNLI*PRGPVL
Trigger: GAGGACTGGACCGCGAGGTCAGATTAGGTTGTCACC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCATCTGCTAGGCTGTTaGCGGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGHLLGC*RSCSGW
Trigger: CCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGTGCTGCAGGCGGGTaGGCTCAGCCCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGAAGG*AQPACA
Trigger: AGCGCACGCGGGCTGAGCTCACCCGCCTGCAGCACC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGCAGCGCCTGTGAGCTaGGCATCTCTGAGATGGACT +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHAAPVS*ASLRWT
Trigger: AGTCCATCTCAGAGATGCTCAGCTCACAGGCGCTGC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGCTGCCCAAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHSWSRL*RASNIL
Trigger: CAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGA...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCAGCCCGCGTGCGCTaGACGGCCTGGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSARVR*TAWSCR
Trigger: GCGGCAGCTCCAGGCCGTGCAGCGCACGCGGGCTGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAAGGGCCAGCAGCGCTaGCTGCAGGCCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQKGQQR*LQATPT
Trigger: GGTGGGGGTGGCCTGCAGGCAGCGCTGCTGGCCCTT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACAGGACGGCCCCCAGTaGGGTACCCTGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQQDGPQ*GTLGQE
Trigger: CTCCTGGCCCAGGGTACCGCACTGGGGGCCGTCCTG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCTTGTCCCCTACCCTTaGAGGGGCCTCCAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGLVPYP*RGLQLS
Trigger: ACTGAGCTGGAGGCCCCTGCAAGGGTAGGGGACAAG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCCTCCGCTTCCGCCTaGGGTCCTCCAGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSASASA*GPPAAL
Trigger: CAGAGCCGCTGGAGGACCCCAGGCGGAAGCGGAGGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGAGCCCCGGTACTGAATaGTGTTGGGATGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQSPGTE*CWDAGA
Trigger: AGCTCCGGCATCCCAACACCATTCAGTACCGGGGCT...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGTGCGCTGCACGGCCTaGAGCTGCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSVRCTA*SCRSSS
Trigger: GCTGGAGCTGCGGCAGCTCCAGGCCGTGCAGCGCAC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGTGGAACTCTGCCTCCTaGGTCTCATCAAGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQWNSAS*VSSSRS
Trigger: GCTGCGGCTTGATGAGACCCAGGAGGCAGAGTTCCA...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGGCTTTCGCCCTTCCTaGGGGGCGGGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENGFRPS*GAGPGS
Trigger: GCTTCCCGGGCCCGCCCCTCAGGAAGGGCGAAAGCC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCGGTGCTGCAGGCGGGTaGGCTCAGCCCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTGAAGG*AQPACA
Trigger: AGCGCACGCGGGCTGAGCTCACCCGCCTGCAGCACC...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGGTGCTGCAGGCGGGTaGGCTCAGCCCGCGTGCGCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENGAAGG*AQPACA
Trigger: AGCGCACGCGGGCTGAGCTCACCCGCCTGCAGCACC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCAGGGGAACACCCATaGGGCCTCGGCGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPGEHP*GLGASS
Trigger: TGAGCTGGCGCCGAGGCCTCATGGGTGTTCCCCTGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCCCGTGGGTCACAGCTaGGATCTCTACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGPVGHS*DLYLLK
Trigger: CTTCAGGAGGTAGAGATCGCAGCTGTGACCCACGGG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGAAGGAGTTGGCAGGTaGCATGATGGACGCAGAACC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHEGVGR*HDGRRT
Trigger: GGTTCTGCGTCCATCATGGCACCTGCCAACTCCTTC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACGTTCAGCCAGCTCGATaGAGGTTATCCCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHVQPAR*RLSPRT
Trigger: GGTCCTTGGGGATAACCTGCATCGAGCTGGCTGAAC...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCAAAGCCAGCCCGCTaGGCCTCAAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPKPAR*ASSSRC
Trigger: GCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCTCAGCCCGCGTGCGCTaGACGGCCTGGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLSARVR*TAWSCR
Trigger: GCGGCAGCTCCAGGCCGTGCAGCGCACGCGGGCTGA...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCAGCCCGCGTGCGCTaGACGGCCTGGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSARVR*TAWSCR
Trigger: GCGGCAGCTCCAGGCCGTGCAGCGCACGCGGGCTGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGGGACGGGAGTCAGTaGTGGGCCCTGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRDGSQ*WALDPA
Trigger: GGCTGGGTCCAGGGCCCAGCACTGACTCCCGTCCCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCAGGACGGCCCCCAGTaGGGTACCCTGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTQDGPQ*GTLGQE
Trigger: CTCCTGGCCCAGGGTACCGCACTGGGGGCCGTCCTG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTACAGCCCCACAGCCCTaGAGGGCCCGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSTAPQP*RARKAM
Trigger: CATGGCCTTCCGGGCCCTGCAGGGCTGTGGGGCTGT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACCCTGGCTGGCCCGTaGCAGACGCCAGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQTLAGP*QTPVPA
Trigger: GGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCCGGGACTGGCGGGTaGGTGACCTCCGCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENPGTGG*VTSARL
Trigger: TAGCCGGGCGGAGGTCACGCACCCGCCAGTCCCGGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCGCCAGCTTGCGGGTCTaGTCTTCCTTGAGCCGCTTA +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGASLRV*SSLSRL
Trigger: TAAGCGGCTCAAGGAAGAGCAGACCCGCAAGCTGGC...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACATGGACTGGTCATACTaGTCCGCCAAGATCGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHMDWSY*SAKIAS
Trigger: GCTGGCGATCTTGGCGGAGCAGTATGACCAGTCCAT...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGCCTCCGCTTCCGCCTaGGGTCCTCCAGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTASASA*GPPAAL
Trigger: CAGAGCCGCTGGAGGACCCCAGGCGGAAGCGGAGGC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCGACCAGTGTCCTGACTaGAGCACGGGGGATTCGTTC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGDQCPD*STGDSF
Trigger: GAACGAATCCCCCGTGCTCCAGTCAGGACACTGGTC...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCATGCTGGGCACTGAGTaGCTACTCTCGAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGMLGTE*LLSRLV
Trigger: GACCAGCCTCGAGAGTAGCCACTCAGTGCCCAGCAT...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGGGGCTGCAGGCGGCTaGAGAGGGCTGGGGGTTATC +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGGAAGG*RGLGVI
Trigger: GATAACCCCCAGCCCTCTCCAGCCGCCTGCAGCCCC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGCGGGCGGAAGAGGTaGTGGAAGTGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGGRKR*WKWELG
Trigger: CCCCAGCTCCCACTTCCACCACCTCTTCCGCCCGCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGCTCCAGCTCCCGCGTaGCCTCGTGCTGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGAPAPA*PRAAEA
Trigger: TGCTTCGGCAGCACGAGGCCACGCGGGAGCTGGAGC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCTCCAGCTCCCGCGTaGCCTCGTGCTGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAPAPA*PRAAEA
Trigger: TGCTTCGGCAGCACGAGGCCACGCGGGAGCTGGAGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGTGCGCTGCACGGCCTaGAGCTGCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTVRCTA*SCRSSS
Trigger: GCTGGAGCTGCGGCAGCTCCAGGCCGTGCAGCGCAC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCAGAGCCCCAGGAATaGGGAGTGGAAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPEPQE*GVEGPG
Trigger: CCCCGGGCCTTCCACTCCCCATTCCTGGGGCTCTGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCCGGGGGATTCGGGTaGGCCGTTCACCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAGGFG*AVHPEA
Trigger: TGCTTCGGGGTGAACGGCCCACCCGAATCCCCCGGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGCCCTAGCTGGCGCTaGCTGCGTGGTAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGPSWR*LRGSSR
Trigger: CCGGCTACTACCACGCAGCCAGCGCCAGCTAGGGCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCAGGGGGCCCTAGCTaGCGCTGGCTGCGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAGGPS*RWLRGS
Trigger: ACTACCACGCAGCCAGCGCCAGCTAGGGCCCCCTGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGAGTGGGAAGAACCATTaGGGATGTGGGAAGCGACAC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQSGKNH*GCGKRH
Trigger: GTGTCGCTTCCCACATCCTCAATGGTTCTTCCCACT...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGACCAGACGTCCACTTTaGCATCGTACTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQTRRPL*HRTAPH
Trigger: ATGAGGGGCAGTACGATGGCAAAGTGGACGTCTGGT...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTCCCGCTGCAGCCGTaGACTGTGCTCCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLPLQP*TVLLPF
Trigger: GAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQASSSR*SRALCS
Trigger: GGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCCAAAGCCAGCCCGCTaGGCCTCAAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTPKPAR*ASSSRC
Trigger: GCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATGGAGCTGCTCCTTCTaGCGCAGCAGCCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQWSCSF*RSSHSA
Trigger: GGCCGAGTGGCTGCTGCGGCAGAAGGAGCAGCTCCA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGGAGCCAGCAACATCTTaGGCTTGTACTGGCGACACT +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQEPATS*ACTGDT
Trigger: AGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTC...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACGCGTGGCCTCGTGCTaGCGAAGCAGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRVASC*RSSSAH
Trigger: GTGTGCACTGCTGCTTCGGCAGCACGAGGCCACGCG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCGCGTGGCCTCGTGCTaGCGAAGCAGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRVASC*RSSSAH
Trigger: GTGTGCACTGCTGCTTCGGCAGCACGAGGCCACGCG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCCCGCGTGGCCTCGTaGTGCCGAAGCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSRVAS*CRSSSA
Trigger: TGCACTGCTGCTTCGGCAGCACGAGGCCACGCGGGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAGCTCCGTCTGGTGCTaGAGGCGGGTGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSSVWC*RRVSSA
Trigger: GGCTGAGCTCACCCGCCTGCAGCACCAGACGGAGCT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCCAGCTCCGTCTGGTaGTGCAGGCGGGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPSSVW*CRRVSS
Trigger: TGAGCTCACCCGCCTGCAGCACCAGACGGAGCTGGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAGGGACGGGAGTCAGTaGTGGGCCCTGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRDGSQ*WALDPA
Trigger: GGCTGGGTCCAGGGCCCAGCACTGACTCCCGTCCCT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCAGGACGGCCCCCAGTaGGGTACCCTGGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENQDGPQ*GTLGQE
Trigger: CTCCTGGCCCAGGGTACCGCACTGGGGGCCGTCCTG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACCAGAGTCGAGATATaGCCCGGCGCACCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTRVEI*PGAPGG
Trigger: GCCCCCGGGTGCGCCGGGGCATATCTCGACTCTGGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGACGGGCAGGCGGCTaGGGAAGCCATCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGRAGG*GSHPCW
Trigger: CCAACAAGGATGGCTTCCGCAGCCGCCTGCCCGTCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACCCTGGCTGGCCCGTaGCAGACGCCAGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTLAGP*QTPVPA
Trigger: GGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GCGGGGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACCGCAGAGCCTTGTACTaGCGAGTCTGGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: AGLPGSLEAPIAKLALGHRRALY*RVWILH
Trigger: GTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCG...GTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCGCAGCGCGACCCTCTaGTCCAGCTCCCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTRSATL*SSSRSS
Trigger: GGAGCTGCGGGAGCTGGAGCAGAGGGTCGCGCTGCG...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTCCTCTTCCACCCGCTaGTCCAGCAGTGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKSSSTR*SSSARR
Trigger: GCGGCGGGCACTGCTGGAGCAGCGGGTGGAAGAGGA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGCTACTCTCGAGGCTaGTCAGAGTCCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGYSRG*SESRPG
Trigger: ACCGGGCCGGGACTCTGACCAGCCTCGAGAGTAGCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGGGCTGCAGGCGGCTaGAGAGGGCTGGGGGTTATC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGAAGG*RGLGVI
Trigger: GATAACCCCCAGCCCTCTCCAGCCGCCTGCAGCCCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGCGGGCGGAAGAGGTaGTGGAAGTGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGGRKR*WKWELG
Trigger: CCCCAGCTCCCACTTCCACCACCTCTTCCGCCCGCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGCCTCCTTCTCACCTATaGCCTGGTGCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGPPSHL*PGAAGP
Trigger: TGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGG...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCTCCTTCTCACCTATaGCCTGGTGCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPPSHL*PGAAGP
Trigger: TGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCTCCTTCTCACCTATaGCCTGGTGCCGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPPSHL*PGAAGP
Trigger: TGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCTTCCTCCTCCGCCTaGCACTGCTGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQASSSA*HCWSCS
Trigger: GGAGCAGCTCCAGCAGTGCCAGGCGGAGGAGGAAGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGACGGGAGTCAGTGCTaGGCCCTGGACCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSDGSQC*ALDPAK
Trigger: CTTGGCTGGGTCCAGGGCCCAGCACTGACTCCCGTC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGACGGGAGTCAGTGCTaGGCCCTGGACCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQDGSQC*ALDPAK
Trigger: CTTGGCTGGGTCCAGGGCCCAGCACTGACTCCCGTC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCCGGCCAGGAGGCCATaGGACAGGAGTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTPARRP*DRSPGS
Trigger: GCTCCCTGGACTCCTGTCCCATGGCCTCCTGGCCGG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGGCCCGGAAGGCCATaGGTGACAGGCGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGPGRP*VTGAAE
Trigger: TTCTGCTGCGCCTGTCACCCATGGCCTTCCGGGCCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATGGCCAGTGTGTGGATaGCCCACGGGGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQWPVCG*PTGASG
Trigger: CCCACTTGCCCCCGTGGGCCATCCACACACTGGCCA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACAGCTGGCCAGTGTGTaGATGGCCCACGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQQLASV*MAHGGK
Trigger: CTTGCCCCCGTGGGCCATCCACACACTGGCCAGCTG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCAGCTGGCCAGTGTGTaGATGGCCCACGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSQLASV*MAHGGK
Trigger: CTTGCCCCCGTGGGCCATCCACACACTGGCCAGCTG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGAAGCAGGCCCCAGCTaGCCAGTGTGTGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQEAGPS*PVCGWP
Trigger: GGGCCATCCACACACTGGCCAGCTGGGGCCTGCTTC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGTGGAGGGGGCATGCCTaGTGGAGGAGGGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGWRGHA*WRRAMA
Trigger: AGCCATGGCCCTCCTCCACCAGGCATGCCCCCTCCA...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTCGCCAAGCTGGCCCTaGGCCACTGGCCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKSPSWP*ATGQPQ
Trigger: TTGGGGCTGGCCAGTGGCCCAGGGCCAGCTTGGCGA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCTTCCTGCCAGTAAGGTaGCCTCTCATTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGFLPVR*PLILPA
Trigger: GGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAA...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCTGGCTGGAGGCGCTaGTGGACATGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSGWRR*WTCWAL
Trigger: CAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQSCSWI*RLTREA
Trigger: CGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTCACCCCTCAGCCGTaGCTCCAGGGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTFTPQP*LQGQQL
Trigger: CAGCTGCTGGCCCTGGAGTCACGGCTGAGGGGTGAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCCTGGCCCCAGGCCTaGGTCAATGAGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPWPQA*VNEGED
Trigger: ATCCTCACCCTCATTGACTCAGGCCTGGGGCCAGGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCCCCGCGCCCTCTCTaGCTCTCCTCTTCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSPRPL*LSSSPS
Trigger: AGACGGAGAAGAGGAGAGGCAGAGAGGGCGCGGGGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGTGGGAGTGCAGATATaGCAGGCCCTGAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSVGVQI*QALKRP
Trigger: GGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCAC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGTGTGCTCCCCCTCCTaGATCATGGCCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQVCSPS*IMAISR
Trigger: CCGGGAGATGGCCATGATGCAGGAGGGGGAGCACAC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGCAGCCGTGCACTGTaGTCCTCCCGTTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSCSRAL*SSRSPL
Trigger: GAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGCCTGGGCAGCTCGTaGCTCCTTCTCACCTATGGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGLGSS*LLLTYG
Trigger: GCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGCCTGGGCAGCTCGTaGCTCCTTCTCACCTATGGC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGLGSS*LLLTYG
Trigger: GCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGTAGGTCCGCTTCTGTaGCTCCAGCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSVGPLL*LQQGSQ
Trigger: CTGGCTGCCCTGCTGGAGGCACAGAAGCGGACCTAC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGTAGGTCCGCTTCTGTaGCTCCAGCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQVGPLL*LQQGSQ
Trigger: CTGGCTGCCCTGCTGGAGGCACAGAAGCGGACCTAC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTGGAGCTGCTCCTTCTaGCGCAGCAGCCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTWSCSF*RSSHSA
Trigger: GGCCGAGTGGCTGCTGCGGCAGAAGGAGCAGCTCCA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGCACTGCTGGAGCTaGTCCTTCTGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWHCWS*SFCRSS
Trigger: GCTGCTGCGGCAGAAGGAGCAGCTCCAGCAGTGCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGTCCTCCGCCTGGCACTaGTGGAGCTGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGSSAWH*WSCSFC
Trigger: GCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGAGGA...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCGCGTGGCCTCGTGCTaGCGAAGCAGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRVASC*RSSSAH
Trigger: GTGTGCACTGCTGCTTCGGCAGCACGAGGCCACGCG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGAGGAGGACCCCACTaGAAAGGAGAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRGGPH*KGEAGQ
Trigger: CTGGCCGGCCTCTCCTTTGCAGTGGGGTCCTCCTCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAGAGGAGGACCCCACTaGAAAGGAGAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRGGPH*KGEAGQ
Trigger: CTGGCCGGCCTCTCCTTTGCAGTGGGGTCCTCCTCT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACCCCCACCCTGGGCTaGCAGCAATGGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQTPTLG*QQWKQQ
Trigger: CTGCTGCTTCCATTGCTGGCAGCCCAGGGTGGGGGT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGACGGGCAGGCGGCTaGGGAAGCCATCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGRAGG*GSHPCW
Trigger: CCAACAAGGATGGCTTCCGCAGCCGCCTGCCCGTCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTAGCTGGCGCTGGCTaGGTGGTAGTAGCCGGGGGA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLAGAG*VVVAGG
Trigger: TCCCCCGGCTACTACCACGCAGCCAGCGCCAGCTAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGTCGGAGCGTCCTGTCTaGAGGGCCAGCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGSERPV*RASSSS
Trigger: AGAGGAGCTGCTGGCCCTGCAGACAGGACGCTCCGA...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGCCGCTCAAGCAGACTaGGGATTCGCTCGGAGCGTC +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGAAQAD*GFARSV
Trigger: GACGCTCCGAGCGAATCCGCAGTCTGCTTGAGCGGC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCTTCGGCCACCGACTaGGGGCCCACCCCGAGGACG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSSATD*GPTPRT
Trigger: CGTCCTCGGGGTGGGCCCCCAGTCGGTGGCCGAAGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGCATGTTAAAGAGCGGTaGTTTCCGTTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQHVKER*FPFSQL
Trigger: GAGCTGGCTGAACGGAAACCACCGCTCTTTAACATG...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCGGCACCAGGGCCGTTaGGTGCCTCTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRHQGR*VPLGTG
Trigger: TCCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCTCCTCTTCCTCCTCTaGGGCCTCGGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLLLFLL*GLGTRA
Trigger: GGCCCTGGTGCCGAGGCCCCAGAGGAGGAAGAGGAG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGGGGCTGCAGGCGGCTaGAGAGGGCTGGGGGTTATC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENGAAGG*RGLGVI
Trigger: GATAACCCCCAGCCCTCTCCAGCCGCCTGCAGCCCC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCCGCTTGGGAGTGCTaGGGTTCTCCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPAWEC*GSPGAP
Trigger: AGGAGCTCCAGGAGAACCCCAGCACTCCCAAGCGGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCGCCTGGCACTGCTaGAGCTGCTCCTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSAWHC*SCSFCR
Trigger: GCGGCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGCSSKY*RCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCA...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSCSSKY*RCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGACGGGAGTCAGTGCTaGGCCCTGGACCCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTDGSQC*ALDPAK
Trigger: CTTGGCTGGGTCCAGGGCCCAGCACTGACTCCCGTC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGGATGCTAAACCCTaGCTGGCCCGTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWDAKP*LARARR
Trigger: GCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCCCACGGGGGCAAGTaGGATGCTAAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQAHGGK*DAKPWL
Trigger: CAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGCCCTCCTTTCCTAGGTaGCGGAGGGAGACCCCTGGC +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKPSFPR*RRETPG
Trigger: GCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGG...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTGGAGGGGAGGGGGTaGCAACCTAATCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLEGRG*QPNLTS
Trigger: CGAGGTCAGATTAGGTTGTCACCCCCTCCCCTCCAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTGGCTTTCGCCCTTCCTaGGGGGCGGGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPGFRPS*GAGPGS
Trigger: GCTTCCCGGGCCCGCCCCTCAGGAAGGGCGAAAGCC...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACTCAGACCAGTGTCCTaGCTGGAGCACGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLRPVS*LEHGGF
Trigger: GAATCCCCCGTGCTCCAGTCAGGACACTGGTCTGAG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACATCTGCTAGGCTGTTaGCGGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQHLLGC*RSCSGW
Trigger: CCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGAGCTGTGAGAGGTaGCTGTGTGCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWSCER*LCAPPP
Trigger: AGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSCSWI*RLTREA
Trigger: CGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCTCGTCCAAATCTCTaGCCTCGGGCAGAGGACCCA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSARPNL*PRAEDP
Trigger: TGGGTCCTCTGCCCGAGGTCAGAGATTTGGACGAGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAACCCCGGATACTGGTaGACGCAGGGGCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGNPGYW*TQGPEP
Trigger: AGGTTCAGGCCCCTGCGTGCACCAGTATCCGGGGTT...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTGCAGCCGTGCACTGTaGTCCTCCCGTTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTCSRAL*SSRSPL
Trigger: GAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTASSSR*SRALCS
Trigger: GGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGC...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCTCCGCCTGGCACTaGTGGAGCTGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSSAWH*WSCSFC
Trigger: GCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGAGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCTCCCGCGTGGCCTCGTaGTGCCGAAGCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTSRVAS*CRSSSA
Trigger: TGCACTGCTGCTTCGGCAGCACGAGGCCACGCGGGA...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCCCAGCTCCGTCTGGTaGTGCAGGCGGGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLPSSVW*CRRVSS
Trigger: TGAGCTCACCCGCCTGCAGCACCAGACGGAGCTGGG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGGCCGCATGCTTCTaGCGCAACTCTTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWAACF*RNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLRLLG*WRTWAA
Trigger: TGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAGGGACGGGAGTCAGTaGTGGGCCCTGGACCCAGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTRDGSQ*WALDPA
Trigger: GGCTGGGTCCAGGGCCCAGCACTGACTCCCGTCCCT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACCCCCACCCTGGGCTaGCAGCAATGGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTPTLG*QQWKQQ
Trigger: CTGCTGCTTCCATTGCTGGCAGCCCAGGGTGGGGGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAACCAGAGTCGAGATATaGCCCGGCGCACCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTTRVEI*PGAPGG
Trigger: GCCCCCGGGTGCGCCGGGGCATATCTCGACTCTGGT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAACAGCCCCACAGCCCTaGAGGGCCCGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTTAPQP*RARKAM
Trigger: CATGGCCTTCCGGGCCCTGCAGGGCTGTGGGGCTGT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGGACGGGCAGGCGGCTaGGGAAGCCATCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENGRAGG*GSHPCW
Trigger: CCAACAAGGATGGCTTCCGCAGCCGCCTGCCCGTCC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCCAGTTCCAGCCCTTaGACAGGACCCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQASSSP*TGPRPL
Trigger: CAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCCAGTTCCAGCCCTTaGACAGGACCCAGACCCTTG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSASSSP*TGPRPL
Trigger: CAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAACCCTGGCTGGCCCGTaGCAGACGCCAGTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTTLAGP*QTPVPA
Trigger: GGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCGCCATGGCTCCAGTGTaGCCCAGAACGGGGAACGGG +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLAMAPV*PRTGNG
Trigger: CCCGTTCCCCGTTCTGGGGCACACTGGAGCCATGGC...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCTGCCCAGCTCATCTaGTCCTCCCCGCTGCACCTC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTPAQLI*SSPLHL
Trigger: GAGGTGCAGCGGGGAGGAGCAGATGAGCTGGGCAGG...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCTGAGAGTGGGGCCTaGCCTGGTAGGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPESGA*PGRGHY
Trigger: ATAGTGACCCCTACCAGGCCAGGCCCCACTCTCAGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGAGCTCAGCCACATCTaGGTCCTTCAGGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTELSHI*VLQAPG
Trigger: GCCGGGAGCCTGAAGGACCCAGATGTGGCTGAGCTC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTCCTCTTCCTCCTCTaGGGCCTCGGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLLFLL*GLGTRA
Trigger: GGCCCTGGTGCCGAGGCCCCAGAGGAGGAAGAGGAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGCGGGCGGAAGAGGTaGTGGAAGTGGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTGGRKR*WKWELG
Trigger: CCCCAGCTCCCACTTCCACCACCTCTTCCGCCCGCC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGGAGGCGGTTCGGATaGTGGCAAAGTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGRRFG*WQSGLG
Trigger: ACCGAGACCACTTTGCCACCATCCGAACCGCCTCCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATTCTCACCTATGGCCTaGTGCCGCCGGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQFSPMA*CRRASF
Trigger: AAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCGGCCTTCTCCCGCTTaGGAGTGCTGGGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRPSPA*ECWGSP
Trigger: AGGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCCCGCAGCAGGTCCTaGTCCAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGCTCCAGCTCCCGCGTaGCCTCGTGCTGCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTAPAPA*PRAAEA
Trigger: TGCTTCGGCAGCACGAGGCCACGCGGGAGCTGGAGC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGGCCTCAGGTGTGTTaGAGGGGGTTCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGPQVC*RGFRRD
Trigger: ATCCCTCCTGAACCCCCTCCAACACACCTGAGGCCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGGCCTCAGGTGTGTTaGAGGGGGTTCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGPQVC*RGFRRD
Trigger: ATCCCTCCTGAACCCCCTCCAACACACCTGAGGCCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTGGGCTGCCAGCAATaGAAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLGCQQ*KQQQQQ
Trigger: CTGCTGCTGCTGCTGCTTCCATTGCTGGCAGCCCAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACTAATGGGTGTTGGGTaGTGCGGGGATTACGCCGCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLMGVG*CGDYAA
Trigger: GGCGGCGTAATCCCCGCACCACCCAACACCCATTAG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAATGCTAAACCCTGGCTaGCCCGTGCCAGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQMLNPG*PVPDAS
Trigger: ACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCAT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATTGGGCTGGAAGGGCTaGAGTCAGCTACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLGWKG*SQLPPG
Trigger: CCCTGGAGGTAGCTGACTCCAGCCCTTCCAGCCCAA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCAGGGGGCATGCCTGGTaGAGGAGGGCCATGGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLRGHAW*RRAMAP
Trigger: TGGAGCCATGGCCCTCCTCCACCAGGCATGCCCCCT...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCTGGCCCTGGGCCACTaGCCAGCCCCAAGAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTLALGH*PAPRSS
Trigger: TGAGCTTCTTGGGGCTGGCCAGTGGCCCAGGGCCAG...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATGGGACCCAGGGGCCTaGGCTGTAGGTCTTCGGCCA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTWDPGA*AVGLRP
Trigger: TGGCCGAAGACCTACAGCTCAGGCCCCTGGGTCCCA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGCTTTCGCCCTTCCTaGGGGGCGGGCCCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGFRPS*GAGPGS
Trigger: GCTTCCCGGGCCCGCCCCTCAGGAAGGGCGAAAGCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCTTTCTGGGTCATCCTTaGAGAAGAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGFLGHP*RRAQPH
Trigger: ATGTGGCTGAGCTCTTCTTCAAGGATGACCCAGAAA...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCAGATATGCCAGGCCCTaGAGCGCCCCGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTRYARP*SAPWVT
Trigger: TGTGACCCACGGGGCGCTTCAGGGCCTGGCATATCT...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTCAGACCAGTGTCCTaGCTGGAGCACGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLRPVS*LEHGGF
Trigger: GAATCCCCCGTGCTCCAGTCAGGACACTGGTCTGAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGGACTAGGGGCTCCTaGTTCTTCCCCCAGAATCCT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGTRGS*FFPQNP
Trigger: AGGATTCTGGGGGAAGAATCAGGAGCCCCTAGTCCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCGCTCCCAGGCAGCCTTaGGGCACCTATCGCCAAGCT +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLAPRQP*GTYRQA
Trigger: AGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGC...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAACCCCGGATACTGGTaGACGCAGGGGCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTNPGYW*TQGPEP
Trigger: AGGTTCAGGCCCCTGCGTGCACCAGTATCCGGGGTT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCGTGTGCTCCCCCTCCTaGATCATGGCCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTVCSPS*IMAISR
Trigger: CCGGGAGATGGCCATGATGCAGGAGGGGGAGCACAC...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTCCCGCTGCAGCCGTaGACTGTGCTCCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLPLQP*TVLLPF
Trigger: GAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSPMAW*RRASFS
Trigger: AGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCGGCCTGGGCAGCTCGTaGCTCCTTCTCACCTATGGC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTGLGSS*LLLTYG
Trigger: GCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCC...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGCCCAAGGATGTGCTaGTGGAACTTCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSCPRMC*WNFRSS
Trigger: CGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGCTGCCCAAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCCTCCGCCTGGCACTaGTGGAGCTGCTCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSSAWH*WSCSFC
Trigger: GCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGAGGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQSWSRL*RASNIL
Trigger: CAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAGCTCCGTCTGGTGCTaGAGGCGGGTGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSSVWC*RRVSSA
Trigger: GGCTGAGCTCACCCGCCTGCAGCACCAGACGGAGCT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTGGGCCGCATGCTTCTaGCGCAACTCTTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTWAACF*RNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENLRLLG*WRTWAA
Trigger: TGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCCAGAATCCTCTGCTaGTTGGGCTCCAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPRILC*LGSKVA
Trigger: GGCCACTTTGGAGCCCAAGCAGCAGAGGATTCTGGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACAGAGGAGGACCCCACTaGAAAGGAGAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENRGGPH*KGEAGQ
Trigger: CTGGCCGGCCTCTCCTTTGCAGTGGGGTCCTCCTCT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGACTGGAGGGCAGGTaGAGGGCTGTACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRLEGR*RAVQRS
Trigger: GCTCCTTTGTACAGCCCTGCACCTGCCCTCCAGTCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCGGGACTGGCGGGTaGGTGACCTCCGCCCGGCTA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPGTGG*VTSARL
Trigger: TAGCCGGGCGGAGGTCACGCACCCGCCAGTCCCGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGGAGGGGCAAAGCCTaGAAATTTGGGACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRRGKA*KFGTQG
Trigger: CCCCTGGGTCCCAAATTTCCAGGCTTTGCCCCTCCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGCCCCGGTACTGAATaGTGTTGGGATGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQSPGTE*CWDAGA
Trigger: AGCTCCGGCATCCCAACACCATTCAGTACCGGGGCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCTATGGATCATGTTGTaGGAGTGCAGATATGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSQAALRHLSPSWPWATGLWIML*ECRYAR
Trigger: CCTGGCATATCTGCACTCCCACAACATGATCCATAG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGACCAGTGTCCTGACTaGAGCACGGGGGATTCGTTC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSDQCPD*STGDSF
Trigger: GAACGAATCCCCCGTGCTCCAGTCAGGACACTGGTC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGCTACTCTCGAGGCTaGTCAGAGTCCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTGYSRG*SESRPG
Trigger: ACCGGGCCGGGACTCTGACCAGCCTCGAGAGTAGCC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAATGCTGGGCACTGAGTaGCTACTCTCGAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQMLGTE*LLSRLV
Trigger: GACCAGCCTCGAGAGTAGCCACTCAGTGCCCAGCAT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTGACGGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCCCCTCCTGCATCATaGCCATCTCCCGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENPPPAS*PSPGLQ
Trigger: CTGAAGCCCGGGAGATGGCCATGATGCAGGAGGGGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGGAGGCGGTTCGGATaGTGGCAAAGTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGRRFG*WQSGLG
Trigger: ACCGAGACCACTTTGCCACCATCCGAACCGCCTCCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTTCTCACCTATGGCCTaGTGCCGCCGGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKFSPMA*CRRASF
Trigger: AAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCGGCCTTCTCCCGCTTaGGAGTGCTGGGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENRPSPA*ECWGSP
Trigger: AGGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCCGCCTGGCACTGCTaGAGCTGCTCCTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSAWHC*SCSFCR
Trigger: GCGGCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGTGCGCTGCACGGCCTaGAGCTGCCGCAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITVRCTA*SCRSSS
Trigger: GCTGGAGCTGCGGCAGCTCCAGGCCGTGCAGCGCAC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTACAATGCTCCTCTCCTaGGGTACAAGGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSTMLLS*GTREGT
Trigger: GGTGCCCTCCCTTGTACCCCAGGAGAGGAGCATTGT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGAGTAGGAAAAGACTaGAGGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGVGKD*RAGAGL
Trigger: CAGCCCTGCACCTGCCCTCCAGTCTTTTCCTACTCC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGAGTAGGAAAAGACTaGAGGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGVGKD*RAGAGL
Trigger: CAGCCCTGCACCTGCCCTCCAGTCTTTTCCTACTCC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCCAGTGCGGTACCCTaGGCCAGGAGTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPSAVP*ARSRKR
Trigger: TCTTTTCCTACTCCTGGCCCAGGGTACCGCACTGGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGGCCCGGAAGGCCATaGGTGACAGGCGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTGPGRP*VTGAAE
Trigger: TTCTGCTGCGCCTGTCACCCATGGCCTTCCGGGCCC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTAATGGGTGTTGGGTaGTGCGGGGATTACGCCGCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLMGVG*CGDYAA
Trigger: GGCGGCGTAATCCCCGCACCACCCAACACCCATTAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTATGCTAAACCCTGGCTaGCCCGTGCCAGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTMLNPG*PVPDAS
Trigger: ACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCAT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTGGGATGCTAAACCCTaGCTGGCCCGTGCCAGACGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENWDAKP*LARARR
Trigger: GCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGAAGCAGGCCCCAGCTaGCCAGTGTGTGGATGGCCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTEAGPS*PVCGWP
Trigger: GGGCCATCCACACACTGGCCAGCTGGGGCCTGCTTC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTCGGCTGACGCCAGGCTaGAGGGGGCATGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPRLTPG*RGHAWW
Trigger: CCACCAGGCATGCCCCCTCCAGCCTGGCGTCAGCCG...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGTCTGAGGGGAGCTaGAGCCTACATCTTGTCCCC +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGRSEGS*SLHLVP
Trigger: GGGGACAAGATGTAGGCTCCAGCTCCCCTCAGACCT...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGTGACAACCTAATCTaGCCTCGCGGTCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGDNLI*PRGPVL
Trigger: GAGGACTGGACCGCGAGGTCAGATTAGGTTGTCACC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCTGGCTGGAGGCGCTaGTGGACATGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSGWRR*WTCWAL
Trigger: CAGTGCCCAGCATGTCCATCAGCGCCTCCAGCCAGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTGGAGCTGTGAGAGGTaGCTGTGTGCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENWSCER*LCAPPP
Trigger: AGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCCAGGGGAACACCCATaGGGCCTCGGCGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITPGEHP*GLGASS
Trigger: TGAGCTGGCGCCGAGGCCTCATGGGTGTTCCCCTGG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAGAGGGTGGAGCCCATaGAGGAAAGGGCCAGCATTT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRGWSP*RKGPAF
Trigger: AAATGCTGGCCCTTTCCTTCATGGGCTCCACCCTCT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCAATGCTCCTCTCTTTaGGGCTCTTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTQCSSL*GSWAAG
Trigger: GCCAGCAGCCCAAGAGCCTCAAAGAGAGGAGCATTG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGAAGGAGTTGGCAGGTaGCATGATGGACGCAGAACC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQEGVGR*HDGRRT
Trigger: GGTTCTGCGTCCATCATGGCACCTGCCAACTCCTTC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGTTCAGCCAGCTCGATaGAGGTTATCCCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSVQPAR*RLSPRT
Trigger: GGTCCTTGGGGATAACCTGCATCGAGCTGGCTGAAC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACCAGGGCCGTTGGGTaGCTCTTGGAACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQTRAVG*LLEQDL
Trigger: AAGATCCTGTTCCAAGAGGCACCCAACGGCCCTGGT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSPMAW*RRASFS
Trigger: AGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTGCTGCCCAAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAGCTCCTTCTTCTGCTaGCCAAGGATGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSSFFC*PRMCCW
Trigger: CCAGCAGCACATCCTTGGGCAGCAGAAGAAGGAGCT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCTCCCGCTTGGGAGTaGTGGGGTTCTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSPAWE*WGSPGA
Trigger: AGCTCCAGGAGAACCCCAGCACTCCCAAGCGGGAGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATGGCACTGCTGGAGCTaGTCCTTCTGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTWHCWS*SFCRSS
Trigger: GCTGCTGCGGCAGAAGGAGCAGCTCCAGCAGTGCCA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCAAAGTACTGGCGCTaGCGCCGCAGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSKYWR*RRSSPA
Trigger: AGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSWSRL*RASNIL
Trigger: CAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCTCCTGGCCAACAATaGTCCTCTCCTGGGGTACAA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPPGQQ*SSPGVQ
Trigger: TTGTACCCCAGGAGAGGAGCATTGTTGGCCAGGAGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAAGGGCCAGCAGCGCTaGCTGCAGGCCACCCCCACC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSKGQQR*LQATPT
Trigger: GGTGGGGGTGGCCTGCAGGCAGCGCTGCTGGCCCTT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTACAGCCCCACAGCCCTaGAGGGCCCGGAAGGCCATG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITTAPQP*RARKAM
Trigger: CATGGCCTTCCGGGCCCTGCAGGGCTGTGGGGCTGT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGGGAAGCGACACTGGTaGTGCGGCTCAGGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRGKRHW*CGSGAR
Trigger: CCGGGCCCCTGAGCCGCAGCACCAGTGTCGCTTCCC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCCTCCGCTTCCGCCTaGGGTCCTCCAGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRASASA*GPPAAL
Trigger: CAGAGCCGCTGGAGGACCCCAGGCGGAAGCGGAGGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCCTGAGAGTGGGGCCTaGCCTGGTAGGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLPESGA*PGRGHY
Trigger: ATAGTGACCCCTACCAGGCCAGGCCCCACTCTCAGG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCTGAGAGTGGGGCCTaGCCTGGTAGGGGTCACTAT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENPESGA*PGRGHY
Trigger: ATAGTGACCCCTACCAGGCCAGGCCCCACTCTCAGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACGGCACCAGGGCCGTTaGGTGCCTCTTGGAACAGGA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTRHQGR*VPLGTG
Trigger: TCCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTATGCTGGGCACTGAGTaGCTACTCTCGAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTMLGTE*LLSRLV
Trigger: GACCAGCCTCGAGAGTAGCCACTCAGTGCCCAGCAT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGGGGCTGCAGGCGGCTaGAGAGGGCTGGGGGTTATC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITGAAGG*RGLGVI
Trigger: GATAACCCCCAGCCCTCTCCAGCCGCCTGCAGCCCC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGGTGCTGGGGTTCTCCTaGAGCTCCTCCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKVLGFS*SSSFSC
Trigger: ACAGCTGAAGGAGGAGCTCCAGGAGAACCCCAGCAC...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACCCGCTTGGGAGTGCTaGGGTTCTCCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTPAWEC*GSPGAP
Trigger: AGGAGCTCCAGGAGAACCCCAGCACTCCCAAGCGGG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCCCGCAGCAGGTCCTaGTCCAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAATCCTCTGCTGCTTaGGCTCCAAAGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSESSAA*APKWPL
Trigger: AAGGGGCCACTTTGGAGCCCAAGCAGCAGAGGATTC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCTCCCATGTTTTTGTaGACTGGGACTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAPMFL*TGTRGS
Trigger: GGAGCCCCTAGTCCCAGTCCACAAAAACATGGGAGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCCGGCCAGGAGGCCATaGGACAGGAGTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITPARRP*DRSPGS
Trigger: GCTCCCTGGACTCCTGTCCCATGGCCTCCTGGCCGG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCTGGGCTGCCAGCAATaGAAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENLGCQQ*KQQQQQ
Trigger: CTGCTGCTGCTGCTGCTTCCATTGCTGGCAGCCCAG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCCCAGTGCGGTACCCTaGGCCAGGAGTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTPSAVP*ARSRKR
Trigger: TCTTTTCCTACTCCTGGCCCAGGGTACCGCACTGGG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAGAGCTAATGGGTGTTaGGTGGTGCGGGGATTACGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRANGC*VVRGLR
Trigger: GCGTAATCCCCGCACCACCCAACACCCATTAGCTCT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGCCGGGGGATTCGGGTaGGCCGTTCACCCCGAAGCA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITAGGFG*AVHPEA
Trigger: TGCTTCGGGGTGAACGGCCCACCCGAATCCCCCGGC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCGTGTCCCACTTTGTGTaGGGGGCCCCAGCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTVSHFV*GAPASL
Trigger: CAAACTGGCTGGGGCCCCCCACACAAAGTGGGACAC...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGTTACCCGGGTATCTaGGAAAGGAGGAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSCYPGI*ERRRGK
Trigger: TTTGCCCCTCCTCCTTTCTCAGATACCCGGGTAACA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACGAATTCCGGATTTCTaGTTGTGGGGTCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRIPDF*LWGLNP
Trigger: GGGGTTCAGACCCCACAATCAGAAATCCGGAATTCG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCGATCTCTACCTCCTaGAGGGGTTTCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQAISTS*RGFLCT
Trigger: AGTGCACAAGAAACCCCTTCAGGAGGTAGAGATCGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACTTCAGGAGAACCTCTaGGGTTGGTCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLQENL*GWSVLR
Trigger: CCTCAAGACAGACCAACCTCAGAGGTTCTCCTGAAG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQWIMEL*EVTVCS
Trigger: GGAGCACACAGTCACCTCTCACAGCTCCATTATCCA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWIMEL*EVTVCS
Trigger: GGAGCACACAGTCACCTCTCACAGCTCCATTATCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCAGGGGAACACCCATaGGGCCTCGGCGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPGEHP*GLGASS
Trigger: TGAGCTGGCGCCGAGGCCTCATGGGTGTTCCCCTGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAACCCCGGATACTGGTaGACGCAGGGGCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTNPGYW*TQGPEP
Trigger: AGGTTCAGGCCCCTGCGTGCACCAGTATCCGGGGTT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTACCAGACGTCCACTTTaGCATCGTACTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSTRRPL*HRTAPH
Trigger: ATGAGGGGCAGTACGATGGCAAAGTGGACGTCTGGT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACCAGGGCCGTTGGGTaGCTCTTGGAACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTRAVG*LLEQDL
Trigger: AAGATCCTGTTCCAAGAGGCACCCAACGGCCCTGGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITASSSR*SRALCS
Trigger: GGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCAAAGCCAGCCCGCTaGGCCTCAAGCTCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPKPAR*ASSSRC
Trigger: GCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTGGAGCTGCTCCTTCTaGCGCAGCAGCCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPWSCSF*RSSHSA
Trigger: GGCCGAGTGGCTGCTGCGGCAGAAGGAGCAGCTCCA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTGGAGCTGCTCCTTCTaGCGCAGCAGCCACTCGGCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITWSCSF*RSSHSA
Trigger: GGCCGAGTGGCTGCTGCGGCAGAAGGAGCAGCTCCA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSWSRL*RASNIL
Trigger: CAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGCTGCCGAAGCAGCAGTaGACACTCCAAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKLPKQQ*TLQVLL
Trigger: CAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAG...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGCTCCGTCTGGTGCTaGAGGCGGGTGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPSSVWC*RRVSSA
Trigger: GGCTGAGCTCACCCGCCTGCAGCACCAGACGGAGCT...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTAGCTCCGTCTGGTGCTaGAGGCGGGTGAGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSSVWC*RRVSSA
Trigger: GGCTGAGCTCACCCGCCTGCAGCACCAGACGGAGCT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCCCCAGAATCCTCTaGTGCTTGGGCTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSPRIL*CLGSKV
Trigger: CACTTTGGAGCCCAAGCAGCAGAGGATTCTGGGGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACAGACTGGAGGGCAGGTaGAGGGCTGTACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENRLEGR*RAVQRS
Trigger: GCTCCTTTGTACAGCCCTGCACCTGCCCTCCAGTCT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTGCCCCAGACCTGCTCTaGCCTGTGGCAGGTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPAPDLL*PVAGLR
Trigger: CCTCAGACCTGCCACAGGGCAGAGCAGGTCTGGGGC...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGACCAGTGTCCTGACTaGAGCACGGGGGATTCGTTC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENDQCPD*STGDSF
Trigger: GAACGAATCCCCCGTGCTCCAGTCAGGACACTGGTC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTCCTCTTCCTCCTCTaGGGCCTCGGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLLFLL*GLGTRA
Trigger: GGCCCTGGTGCCGAGGCCCCAGAGGAGGAAGAGGAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATTGACGGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCTGGGGGTTATCTCTaGCTGGTAGGGGTCATCATA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQAGGYL*LVGVII
Trigger: TATGATGACCCCTACCAGCCAGAGATAACCCCCAGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGTGCTGGGGTTCTCCTaGAGCTCCTCCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENVLGFS*SSSFSC
Trigger: ACAGCTGAAGGAGGAGCTCCAGGAGAACCCCAGCAC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGCTTCCTCCTCCGCCTaGCACTGCTGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITASSSA*HCWSCS
Trigger: GGAGCAGCTCCAGCAGTGCCAGGCGGAGGAGGAAGC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTCCCGCAGCAGGTCCTaGTCCAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCCCGCAGCAGGTCCTaGTCCAGGCTGTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSRSRS*SRLCRA
Trigger: GGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCAGAGCCCCAGGAATaGGGAGTGGAAGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPEPQE*GVEGPG
Trigger: CCCCGGGCCTTCCACTCCCCATTCCTGGGGCTCTGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAATGCTCCTCTCCTaGGGTACAAGGGAGGGCACC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENTMLLS*GTREGT
Trigger: GGTGCCCTCCCTTGTACCCCAGGAGAGGAGCATTGT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCGGCCAGGAGGCCATaGGACAGGAGTCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPARRP*DRSPGS
Trigger: GCTCCCTGGACTCCTGTCCCATGGCCTCCTGGCCGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTAATGGGTGTTGGGTaGTGCGGGGATTACGCCGCC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLMGVG*CGDYAA
Trigger: GGCGGCGTAATCCCCGCACCACCCAACACCCATTAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTGGCCAGTGTGTGGATaGCCCACGGGGGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITWPVCG*PTGASG
Trigger: CCCACTTGCCCCCGTGGGCCATCCACACACTGGCCA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCAGCTGGCCAGTGTGTaGATGGCCCACGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITQLASV*MAHGGK
Trigger: CTTGCCCCCGTGGGCCATCCACACACTGGCCAGCTG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGCCCTAGCTGGCGCTaGCTGCGTGGTAGTAGCCGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGPSWR*LRGSSR
Trigger: CCGGCTACTACCACGCAGCCAGCGCCAGCTAGGGCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCAGGGGGCCCTAGCTaGCGCTGGCTGCGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSAGGPS*RWLRGS
Trigger: ACTACCACGCAGCCAGCGCCAGCTAGGGCCCCCTGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCTCTAGATTTGGGCTaGAAGGGCTGGAGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSALDLG*KGWSQL
Trigger: TAGCTGACTCCAGCCCTTCCAGCCCAAATCTAGAGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCCCGCCGCAGGGGCTaGGGGCTGTTTCTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRARRRG*GLFLSS
Trigger: GCTGCTAAGAAACAGCCCCCAGCCCCTGCGGCGGGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTGTGGGAAGCGACACTaGTGCTGCGGCTCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPCGKRH*CCGSGA
Trigger: GGCCCCTGAGCCGCAGCACCAGTGTCGCTTCCCACA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGCAAAGCCTCTAGGTTaGTGGGAGGAAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTAKPLG*WEEGWG
Trigger: TCCCCATCCTTCCTCCCACCAACCTAGAGGCTTTGC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCGGATATCTGGACTATaGGGACTGTTACCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRISGL*GLLPGY
Trigger: ATACCCGGGTAACAGTCCTCATAGTCCAGATATCCG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGAACGGGATGGAGACTaGATCCGATATTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQERDGD*IRYLNA
Trigger: GGCGTTCAAATATCGGATTCAGTCTCCATCCCGTTC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGGCGATCTCTACCTCCTaGAGGGGTTTCTTGTGCACT +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKAISTS*RGFLCT
Trigger: AGTGCACAAGAAACCCCTTCAGGAGGTAGAGATCGC...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKWIMEL*EVTVCS
Trigger: GGAGCACACAGTCACCTCTCACAGCTCCATTATCCA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCATGCTCCTGGATCTaGCGGCTGACCAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSCSWI*RLTREA
Trigger: CGCCTCCCTGGTCAGCCGTCAGATCCAGGAGCATGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTCACCCCTCAGCCGTaGCTCCAGGGCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSFTPQP*LQGQQL
Trigger: CAGCTGCTGGCCCTGGAGTCACGGCTGAGGGGTGAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCCCTGGCCCCAGGCCTaGGTCAATGAGGGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITPWPQA*VNEGED
Trigger: ATCCTCACCCTCATTGACTCAGGCCTGGGGCCAGGG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAAGTGGCTGGGAAGTTaGGAGTATGCAGTGAGCCTT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSKWLGS*EYAVSL
Trigger: AAGGCTCACTGCATACTCTCAACTTCCCAGCCACTT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACCCGTGGGTCACAGCTaGGATCTCTACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTPVGHS*DLYLLK
Trigger: CTTCAGGAGGTAGAGATCGCAGCTGTGACCCACGGG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTGCAGCCGTGCACTGTaGTCCTCCCGTTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITCSRAL*SSRSPL
Trigger: GAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSASSSR*SRALCS
Trigger: GGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCCTTCAGCTGTTCCTTaGGAAGTTTGTAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSPSAVP*EVCRSA
Trigger: AGCGGACCTACAAACTTCGCAAGGAACAGCTGAAGG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACCTTCAGCTGTTCCTTaGGAAGTTTGTAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQPSAVP*EVCRSA
Trigger: AGCGGACCTACAAACTTCGCAAGGAACAGCTGAAGG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTCAAAGTACTGGCGCTaGCGCCGCAGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPSKYWR*RRSSPA
Trigger: AGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCAAAGTACTGGCGCTaGCGCCGCAGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSKYWR*RRSSPA
Trigger: AGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTAAGTCCTTCTGGGTCTaGTTCTTGTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSKSFWV*FLFRSS
Trigger: GGAGGACCTGAACAAGAAGCAGACCCAGAAGGACTT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCCCGCGTGGCCTCGTaGTGCCGAAGCAGCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSRVAS*CRSSSA
Trigger: TGCACTGCTGCTTCGGCAGCACGAGGCCACGCGGGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCAGCTCCGTCTGGTaGTGCAGGCGGGTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPSSVW*CRRVSS
Trigger: TGAGCTCACCCGCCTGCAGCACCAGACGGAGCTGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTCTGCCGCAACTCTTaGTCACGCCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTFCRNS*SRRLLY
Trigger: GTACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACCAGGTGAGCAGGGCTaGTGTTCTATAGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTPGEQG*CSIGVP
Trigger: AGGCACCCCTATAGAACAGCAGCCCTGCTCACCTGG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTCGATCTCACGGGCCTaGCGCTCAAGCAGACTGCGG +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPSISRA*RSSRLR
Trigger: CCGCAGTCTGCTTGAGCGGCAGGCCCGTGAGATCGA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACATTCTCACTGCCACTaGCCCCCGAGGCTGCCCGCC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPHSHCH*PPRLPA
Trigger: GGCGGGCAGCCTCGGGGGGCAGTGGCAGTGAGAATG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCTCTGCTCCTCCCCGCTaGACCTCAGGAATAGAAGTG +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTSAPPR*TSGIEV
Trigger: CACTTCTATTCCTGAGGTGCAGCGGGGAGGAGCAGA...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGGTACTGAATGGTGTTaGGATGCCGGAGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQGTEWC*DAGASV
Trigger: TACAGAAGCTCCGGCATCCCAACACCATTCAGTACC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGGTACTGAATGGTGTTaGGATGCCGGAGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSGTEWC*DAGASV
Trigger: TACAGAAGCTCCGGCATCCCAACACCATTCAGTACC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAGCCCCGGTACTGAATaGTGTTGGGATGCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSPGTE*CWDAGA
Trigger: AGCTCCGGCATCCCAACACCATTCAGTACCGGGGCT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCCTTCACATCCCTATaGATCATGTTGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAFTSL*IMLWEC
Trigger: GCACTCCCACAACATGATCCATAGGGATGTGAAGGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCCTTCACATCCCTATaGATCATGTTGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQAFTSL*IMLWEC
Trigger: GCACTCCCACAACATGATCCATAGGGATGTGAAGGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACATGTTAAAGAGCGGTaGTTTCCGTTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQHVKER*FPFSQL
Trigger: GAGCTGGCTGAACGGAAACCACCGCTCTTTAACATG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCATCCTTGGTCCTCTaGATCAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSASLVL*IRSMMT
Trigger: AGTCATCATGGACCTGATCCAGAGGACCAAGGATGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGGCTACTCTCGAGGCTaGTCAGAGTCCCGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRGYSRG*SESRPG
Trigger: ACCGGGCCGGGACTCTGACCAGCCTCGAGAGTAGCC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCCGCCTGGCACTGCTaGAGCTGCTCCTTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSAWHC*SCSFCR
Trigger: GCGGCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCTTCCTCCTCCGCCTaGCACTGCTGGAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSASSSA*HCWSCS
Trigger: GGAGCAGCTCCAGCAGTGCCAGGCGGAGGAGGAAGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITCSSKY*RCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSILRLY*RHCSSK
Trigger: CTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGAT...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGCTCCCATGTTTTTGTaGACTGGGACTAGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENAPMFL*TGTRGS
Trigger: GGAGCCCCTAGTCCCAGTCCACAAAAACATGGGAGC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACCCAGTGCGGTACCCTaGGCCAGGAGTAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTPSAVP*ARSRKR
Trigger: TCTTTTCCTACTCCTGGCCCAGGGTACCGCACTGGG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACAGAGCTAATGGGTGTTaGGTGGTGCGGGGATTACGC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENRANGC*VVRGLR
Trigger: GCGTAATCCCCGCACCACCCAACACCCATTAGCTCT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGAGAGGACTAGGGACTaGAGAAACTTCACTGAGTCG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQERTRD*RNFTES
Trigger: CGACTCAGTGAAGTTTCTCCAGTCCCTAGTCCTCTC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGGAACCATTGAGGATGTaGGAAGCGACACTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKEPLRM*EATLVL
Trigger: CAGCACCAGTGTCGCTTCCCACATCCTCAATGGTTC...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGAACGGGATGGAGACTaGATCCGATATTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTERDGD*IRYLNA
Trigger: GGCGTTCAAATATCGGATTCAGTCTCCATCCCGTTC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATTTCTGGGTCATCCTTaGAGAAGAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQFLGHP*RRAQPH
Trigger: ATGTGGCTGAGCTCTTCTTCAAGGATGACCCAGAAA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAGATATGCCAGGCCCTaGAGCGCCCCGTGGGTCACA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRYARP*SAPWVT
Trigger: TGTGACCCACGGGGCGCTTCAGGGCCTGGCATATCT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCTTCAGGAGAACCTCTaGGGTTGGTCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLLQENL*GWSVLR
Trigger: CCTCAAGACAGACCAACCTCAGAGGTTCTCCTGAAG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCATCTGCTAGGCTGTTaGCGGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITHLLGC*RSCSGW
Trigger: CCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGCCTGCACGTACTTTaGGGCTCTTGGGCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGLHVL*GSWAAG
Trigger: GCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGAGGCTCTTGTGCTaGGCTTTGGGCGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPRRLLC*ALGVVS
Trigger: GGAGACCACGCCCAAAGCTCAGCACAAGAGCCTCCT...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTCTCTGTGCGGATCTTaGTCTTGCTCTGGTAAGCGT +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKSLCGS*SCSGKR
Trigger: ACGCTTACCAGAGCAAGATCAAGATCCGCACAGAGA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCAAGAAGCTCATGAGATaGGGAGGTCTGAGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTKKLMR*GGLRGA
Trigger: AGCTCCCCTCAGACCTCCTCATCTCATGAGCTTCTT...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGCCCTGTGGCAGGTCTaGGGGCCTCACTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPALWQV*GPHCEG
Trigger: ACCCTCACAGTGAGGCCCTCAGACCTGCCACAGGGC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGTGGGAGTGCAGATATaGCAGGCCCTGAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRVGVQI*QALKRP
Trigger: GGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCAC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGTGGGAGTGCAGATATaGCAGGCCCTGAAGCGCCCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSVGVQI*QALKRP
Trigger: GGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCAC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACCAGACGTCCACTTTaGCATCGTACTGCCCCTCAT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENTRRPL*HRTAPH
Trigger: ATGAGGGGCAGTACGATGGCAAAGTGGACGTCTGGT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGTGTGCTCCCCCTCCTaGATCATGGCCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSVCSPS*IMAISR
Trigger: CCGGGAGATGGCCATGATGCAGGAGGGGGAGCACAC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTGCAGCCGTGCACTGTaGTCCTCCCGTTCACCCCTC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRCSRAL*SSRSPL
Trigger: GAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGCCTGGGCAGCTCGTaGCTCCTTCTCACCTATGGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGLGSS*LLLTYG
Trigger: GCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGCCTTCAGCTGTTCCTTaGGAAGTTTGTAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKPSAVP*EVCRSA
Trigger: AGCGGACCTACAAACTTCGCAAGGAACAGCTGAAGG...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCTCCCGCTTGGGAGTaGTGGGGTTCTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSPAWE*WGSPGA
Trigger: AGCTCCAGGAGAACCCCAGCACTCCCAAGCGGGAGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTGGCACTGCTGGAGCTaGTCCTTCTGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRWHCWS*SFCRSS
Trigger: GCTGCTGCGGCAGAAGGAGCAGCTCCAGCAGTGCCA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGGCACTGCTGGAGCTaGTCCTTCTGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSWHCWS*SFCRSS
Trigger: GCTGCTGCGGCAGAAGGAGCAGCTCCAGCAGTGCCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCAAAGTACTGGCGCTaGCGCCGCAGCAGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSKYWR*RRSSPA
Trigger: AGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGAGCCAGCAACATCTTaGGCTTGTACTGGCGACACT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENEPATS*ACTGDT
Trigger: AGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAAGTCCTTCTGGGTCTaGTTCTTGTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTKSFWV*FLFRSS
Trigger: GGAGGACCTGAACAAGAAGCAGACCCAGAAGGACTT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTGCCGAAGCAGCAGTaGACACTCCAAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLPKQQ*TLQVLL
Trigger: CAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACGCGTGGCCTCGTGCTaGCGAAGCAGCAGTGCACAC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPRVASC*RSSSAH
Trigger: GTGTGCACTGCTGCTTCGGCAGCACGAGGCCACGCG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCTTCTGCCGCAACTCTTaGTCACGCCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLFCRNS*SRRLLY
Trigger: GTACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAA...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTTCTGCCGCAACTCTTaGTCACGCCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENFCRNS*SRRLLY
Trigger: GTACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTGGGCCGCATGCTTCTaGCGCAACTCTTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPWAACF*RNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCGAACCTGGGCCGCATaGTTCTGCCGCAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITRTWAA*FCRNSC
Trigger: GCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLRLLG*WRTWAA
Trigger: TGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCCCCCAGAATCCTCTaGTGCTTGGGCTCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSPRIL*CLGSKV
Trigger: CACTTTGGAGCCCAAGCAGCAGAGGATTCTGGGGGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTACCCCCACCCTGGGCTaGCAGCAATGGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSTPTLG*QQWKQQ
Trigger: CTGCTGCTTCCATTGCTGGCAGCCCAGGGTGGGGGT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLHVSWN*FLICSS
Trigger: GGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGCGCAGCTCCCTCTCGTaGTGGCTCTCTGTGCGGATC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRRSSLS*WLSVRI
Trigger: GATCCGCACAGAGAGCCAGCACGAGAGGGAGCTGCG...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAAGGCTGGAGGGGGCATaGCTGGTGGAGGAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPRLEGA*LVEEGH
Trigger: ATGGCCCTCCTCCACCAGGCATGCCCCCTCCAGCCT...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCGAGTCCCGGATATCTaGACTATGAGGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRVPDI*TMRTVT
Trigger: GGTAACAGTCCTCATAGTCCAGATATCCGGGACTCG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGCTTGCCATTTCTCATTaGACTGCTTCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGLAISH*TASHCR
Trigger: CCTACAGTGGGAAGCAGTCCAATGAGAAATGGCAAG...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTTGCCATTTCTCATTaGACTGCTTCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLAISH*TASHCR
Trigger: CCTACAGTGGGAAGCAGTCCAATGAGAAATGGCAAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACTATGGATCATGTTGTaGGAGTGCAGATATGCCAGG +
Preference number: 4 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLWIML*ECRYAR
Trigger: CCTGGCATATCTGCACTCCCACAACATGATCCATAG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGCATCCTTGGTCCTCTaGATCAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTASLVL*IRSMMT
Trigger: AGTCATCATGGACCTGATCCAGAGGACCAAGGATGC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTTGACGGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCCCTCCTGCATCATaGCCATCTCCCGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPPPAS*PSPGLQ
Trigger: CTGAAGCCCGGGAGATGGCCATGATGCAGGAGGGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCGCTGGGGGTTATCTCTaGCTGGTAGGGGTCATCATA +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLAGGYL*LVGVII
Trigger: TATGATGACCCCTACCAGCCAGAGATAACCCCCAGC...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTGGGAGGCGGTTCGGATaGTGGCAAAGTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPGRRFG*WQSGLG
Trigger: ACCGAGACCACTTTGCCACCATCCGAACCGCCTCCC...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCGCTTGGGAGTGCTaGGGTTCTCCTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPAWEC*GSPGAP
Trigger: AGGAGCTCCAGGAGAACCCCAGCACTCCCAAGCGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSCSSKY*RCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTILRLY*RHCSSK
Trigger: CTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGAT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGAATCCTCTGCTGCTTaGGCTCCAAAGTGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTESSAA*APKWPL
Trigger: AAGGGGCCACTTTGGAGCCCAAGCAGCAGAGGATTC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAGAGCTAATGGGTGTTaGGTGGTGCGGGGATTACGC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTRANGC*VVRGLR
Trigger: GCGTAATCCCCGCACCACCCAACACCCATTAGCTCT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCCCACGGGGGCAAGTaGGATGCTAAACCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSAHGGK*DAKPWL
Trigger: CAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGAGAGGACTAGGGACTaGAGAAACTTCACTGAGTCG +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTERTRD*RNFTES
Trigger: CGACTCAGTGAAGTTTCTCCAGTCCCTAGTCCTCTC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAACACAGAGTGACTGCTaGACTCCACAGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTTQSDC*TPQLRR
Trigger: CCTCCTCAGCTGTGGAGTCCAGCAGTCACTCTGTGT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTGCTGCCGAAGGGCCTaGAACTCTGCCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRCCRRA*NSASWV
Trigger: GACCCAGGAGGCAGAGTTCCAGGCCCTTCGGCAGCA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGGTGGAGGAGGGCCATaGCTCCAGTGTGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRGGGGP*LQCAPE
Trigger: TTCTGGGGCACACTGGAGCCATGGCCCTCCTCCACC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGGGGTAGAGGACAATaGAATGGAACTGAGACGACT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGGRGQ*NGTETT
Trigger: AGTCGTCTCAGTTCCATTCCATTGTCCTCTACCCCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGGTGACAACCTAATCTaGCCTCGCGGTCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITGDNLI*PRGPVL
Trigger: GAGGACTGGACCGCGAGGTCAGATTAGGTTGTCACC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTGGAGGGGAGGGGGTaGCAACCTAATCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLEGRG*QPNLTS
Trigger: CGAGGTCAGATTAGGTTGTCACCCCCTCCCCTCCAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTCAGACCAGTGTCCTaGCTGGAGCACGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLRPVS*LEHGGF
Trigger: GAATCCCCCGTGCTCCAGTCAGGACACTGGTCTGAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTTCAGGAGAACCTCTaGGGTTGGTCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLQENL*GWSVLR
Trigger: CCTCAAGACAGACCAACCTCAGAGGTTCTCCTGAAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCATCTGCTAGGCTGTTaGCGGAGCTGCTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSHLLGC*RSCSGW
Trigger: CCAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGGAGCTGTGAGAGGTaGCTGTGTGCTCCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSWSCER*LCAPPP
Trigger: AGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGGGACTAGGGGCTCCTaGTTCTTCCCCCAGAATCCT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITGTRGS*FFPQNP
Trigger: AGGATTCTGGGGGAAGAATCAGGAGCCCCTAGTCCC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCCCCAGGGGACTAGATaGATATTTGACACGCACATC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLPQGTR*IFDTHI
Trigger: GATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGCTCCAAACAGGGAGTaGAATGACAGCACTGAGCTT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENAPNRE*NDSTEL
Trigger: AAGCTCAGTGCTGTCATTTCACTCCCTGTTTGGAGC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACAAGTGGAAGAGTTCATaGCACACTCAGAGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENKWKSS*HTQRVE
Trigger: CTCCACCCTCTGAGTGTGTCATGAACTCTTCCACTT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRSPMAW*RRASFS
Trigger: AGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSPMAW*RRASFS
Trigger: AGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTTGCCCAAGGATGTGCTaGTGGAACTTCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPCPRMC*WNFRSS
Trigger: CGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCA...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGTAGGTCCGCTTCTGTaGCTCCAGCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPVGPLL*LQQGSQ
Trigger: CTGGCTGCCCTGCTGGAGGCACAGAAGCGGACCTAC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCTTCAGCTGTTCCTTaGGAAGTTTGTAGGTCCGCT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENPSAVP*EVCRSA
Trigger: AGCGGACCTACAAACTTCGCAAGGAACAGCTGAAGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCTCCCGCTTGGGAGTaGTGGGGTTCTCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSPAWE*WGSPGA
Trigger: AGCTCCAGGAGAACCCCAGCACTCCCAAGCGGGAGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCAAGTCCTTCTGGGTCTaGTTCTTGTTCAGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTKSFWV*FLFRSS
Trigger: GGAGGACCTGAACAAGAAGCAGACCCAGAAGGACTT...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATTCTGCCGCAACTCTTaGTCACGCCGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTFCRNS*SRRLLY
Trigger: GTACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGGGCCGCATGCTTCTaGCGCAACTCTTGCTCACGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSWAACF*RNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCGAACCTGGGCCGCATaGTTCTGCCGCAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRTWAA*FCRNSC
Trigger: GCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCCAGGTGAGCAGGGCTaGTGTTCTATAGGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITPGEQG*CSIGVP
Trigger: AGGCACCCCTATAGAACAGCAGCCCTGCTCACCTGG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCATGTTAAAGAGCGGTaGTTTCCGTTCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENHVKER*FPFSQL
Trigger: GAGCTGGCTGAACGGAAACCACCGCTCTTTAACATG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGCATCCTTGGTCCTCTaGATCAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENASLVL*IRSMMT
Trigger: AGTCATCATGGACCTGATCCAGAGGACCAAGGATGC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCGTTGGGTGCCTCTTaGAACAGGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENPLGAS*NRIFFI
Trigger: GATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTGACGGAGCTGCTCTaGCTGGAGGCGCTGATGGAC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLTELL*LEALMD
Trigger: GTCCATCAGCGCCTCCAGCCAGAGCAGCTCCGTCAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACCCCCTCCTGCATCATaGCCATCTCCCGGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPPPPAS*PSPGLQ
Trigger: CTGAAGCCCGGGAGATGGCCATGATGCAGGAGGGGG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGGAGGCGGTTCGGATaGTGGCAAAGTGGTCTCGGT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGRRFG*WQSGLG
Trigger: ACCGAGACCACTTTGCCACCATCCGAACCGCCTCCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTCTCACCTATGGCCTaGTGCCGCCGGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSFSPMA*CRRASF
Trigger: AAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLILRLY*RHCSSK
Trigger: CTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGAT...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGGCCTCAGGTGTGTTaGAGGGGGTTCAGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGPQVC*RGFRRD
Trigger: ATCCCTCCTGAACCCCCTCCAACACACCTGAGGCCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTGGGCTGCCAGCAATaGAAGCAGCAGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLGCQQ*KQQQQQ
Trigger: CTGCTGCTGCTGCTGCTTCCATTGCTGGCAGCCCAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGAAGCCATCCTTGTTaGTTTTGGGGTACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGSHPC*FWGTVQ
Trigger: TTGCACTGTACCCCAAAACCAACAAGGATGGCTTCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTATGCTAAACCCTGGCTaGCCCGTGCCAGACGCCAGT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSMLNPG*PVPDAS
Trigger: ACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCAT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTGGGCTGGAAGGGCTaGAGTCAGCTACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLGWKG*SQLPPG
Trigger: CCCTGGAGGTAGCTGACTCCAGCCCTTCCAGCCCAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGCTCCCTCTCGTGCTaGCTCTCTGTGCGGATCTTG +
Preference number: 4 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPSSLSC*LSVRIL
Trigger: CAAGATCCGCACAGAGAGCCAGCACGAGAGGGAGCT...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCAACTGTCTGGGCCTaGCATCTAATGGTAAATGGA +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSTVWA*HLMVNG
Trigger: TCCATTTACCATTAGATGCCAGGCCCAGACAGTTGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGAACTGAGACGACTTaGGTTCAAACCCCAATTCCT +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGTETT*VQTPIP
Trigger: AGGAATTGGGGTTTGAACCCAAGTCGTCTCAGTTCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACTGGAGGGGAGGGGGTaGCAACCTAATCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPLEGRG*QPNLTS
Trigger: CGAGGTCAGATTAGGTTGTCACCCCCTCCCCTCCAG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACTCAGACCAGTGTCCTaGCTGGAGCACGGGGGATTC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPLRPVS*LEHGGF
Trigger: GAATCCCCCGTGCTCCAGTCAGGACACTGGTCTGAG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGCCCAAGACCCCATCCTaGTCCTTCCTGCCAGTAAGG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRPKTPS*SFLPVR
Trigger: CCTTACTGGCAGGAAGGATCAGGATGGGGTCTTGGG...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGTAAATGGAGACTGTaGAGATGGAGGAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTGKWRL*RWRRRA
Trigger: AGCCCTTCTCCTCCATCTTCACAGTCTCCATTTACC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCGTGGGTCACAGCTaGGATCTCTACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPVGHS*DLYLLK
Trigger: CTTCAGGAGGTAGAGATCGCAGCTGTGACCCACGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGCCCAAGGATGTGCTaGTGGAACTTCCGCTCCTCG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSCPRMC*WNFRSS
Trigger: CGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGCTGCCCAAGGATGTaGTGCTGGAACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSCCPRM*CWNFRS
Trigger: GGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCTGCCGAAGCAGCAGTaGACACTCCAAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITLPKQQ*TLQVLL
Trigger: CAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCCAGAATCCTCTGCTaGTTGGGCTCCAAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPRILC*LGSKVA
Trigger: GGCCACTTTGGAGCCCAAGCAGCAGAGGATTCTGGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCCTCCTGGCCAACAATaGTCCTCTCCTGGGGTACAA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITPPGQQ*SSPGVQ
Trigger: TTGTACCCCAGGAGAGGAGCATTGTTGGCCAGGAGG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAACTGCTTCTTGATCTaGAGCTCCTTAGATTTGAGG +
Preference number: 4 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGNCFLI*SSLDLR
Trigger: CCTCAAATCTAAGGAGCTGCAGATCAAGAAGCAGTT...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCAGTTTATTAAAAGCTTaGCTGGGGCTCTGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: DPILILPASKVASHSPCLSLLKA*LGLCAS
Trigger: GCTGGCACAGAGCCCCAGGCAAGCTTTTAATAAACT...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTTCCCATCATCCTGTTaGGTCTCAGTTAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSFPSSC*VSVNSF
Trigger: GAAGGAATTAACTGAGACGCAACAGGATGATGGGAA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACGAGTCCCGGATATCTaGACTATGAGGACTGTTACC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTRVPDI*TMRTVT
Trigger: GGTAACAGTCCTCATAGTCCAGATATCCGGGACTCG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGATGAACCCCGGATACTaGTGCACGCAGGGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRMNPGY*CTQGPE
Trigger: TTCAGGCCCCTGCGTGCACCAGTATCCGGGGTTCAT...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGTGCTGGGGTTCTCCTaGAGCTCCTCCTTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSVLGFS*SSSFSC
Trigger: ACAGCTGAAGGAGGAGCTCCAGGAGAACCCCAGCAC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGGAGTAGGAAAAGACTaGAGGGCAGGTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSGVGKD*RAGAGL
Trigger: CAGCCCTGCACCTGCCCTCCAGTCTTTTCCTACTCC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCATCCTTGTTGGTTTTaGGGTACAGTGCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTHPCWF*GTVQTD
Trigger: GTCTGTTTGCACTGTACCCCAAAACCAACAAGGATG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTACACAGAGTGACTGCTaGACTCCACAGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITTQSDC*TPQLRR
Trigger: CCTCCTCAGCTGTGGAGTCCAGCAGTCACTCTGTGT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCTTCCGAGAATAGCTaGACGATTGTAGCTAAGGTG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENSSENS*TIVAKV
Trigger: CACCTTAGCTACAATCGTTCAGCTATTCTCGGAAGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCGAATTCCGGATTTCTaGTTGTGGGGTCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITRIPDF*LWGLNP
Trigger: GGGGTTCAGACCCCACAATCAGAAATCCGGAATTCG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATTTCTGGGTCATCCTTaGAGAAGAGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTFLGHP*RRAQPH
Trigger: ATGTGGCTGAGCTCTTCTTCAAGGATGACCCAGAAA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTGCTCTGGTAAGCGTTaGGCAGCTCCAGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRCSGKR*AAPAPV
Trigger: AACAGGAGCTGGAGCTGCTCAACGCTTACCAGAGCA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGAAGGAGTTGGCAGGTaGCATGATGGACGCAGAACC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSEGVGR*HDGRRT
Trigger: GGTTCTGCGTCCATCATGGCACCTGCCAACTCCTTC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTACCAGGGCCGTTGGGTaGCTCTTGGAACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSTRAVG*LLEQDL
Trigger: AAGATCCTGTTCCAAGAGGCACCCAACGGCCCTGGT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGAGCTCCTTCTTCTGCTaGCCAAGGATGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRSSFFC*PRMCCW
Trigger: CCAGCAGCACATCCTTGGGCAGCAGAAGAAGGAGCT...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGAGCCAGCAACATCTTaGGCTTGTACTGGCGACACT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITEPATS*ACTGDT
Trigger: AGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTGCCGAAGCAGCAGTaGACACTCCAAGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLPKQQ*TLQVLL
Trigger: CAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCATCCTTCTCCACACTaGTTCCCTGATATTGACTTA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTHPSPH*FPDIDL
Trigger: TAAGTCAATATCAGGGAAGCAGTGTGGAGAAGGATG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTTGCCATTTCTCATTaGACTGCTTCCCACTGTAGG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLAISH*TASHCR
Trigger: CCTACAGTGGGAAGCAGTCCAATGAGAAATGGCAAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTATGGATCATGTTGTaGGAGTGCAGATATGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTLWIML*ECRYAR
Trigger: CCTGGCATATCTGCACTCCCACAACATGATCCATAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGCTGGGGGTTATCTCTaGCTGGTAGGGGTCATCATA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITAGGYL*LVGVII
Trigger: TATGATGACCCCTACCAGCCAGAGATAACCCCCAGC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGAAGCCATCCTTGTTaGTTTTGGGGTACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTGSHPC*FWGTVQ
Trigger: TTGCACTGTACCCCAAAACCAACAAGGATGGCTTCC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGCTCTAGATTTGGGCTaGAAGGGCTGGAGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITALDLG*KGWSQL
Trigger: TAGCTGACTCCAGCCCTTCCAGCCCAAATCTAGAGC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTACACAGAGTGACTGCTaGACTCCACAGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSTQSDC*TPQLRR
Trigger: CCTCCTCAGCTGTGGAGTCCAGCAGTCACTCTGTGT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGCTGAGCTTTGGGCGTaGTCTCCAGCAAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPAELWA*SPASVL
Trigger: GAGCACACTTGCTGGAGACCACGCCCAAAGCTCAGC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAAGCCTCTAGGTTGGTaGGAGGAAGGATGGGGATGG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSKPLGW*EEGWGW
Trigger: CCATCCCCATCCTTCCTCCCACCAACCTAGAGGCTT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTTTTCATCAACTGTCTaGGCCTGGCATCTAATGGTA +
Preference number: 4 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTFSSTV*AWHLMV
Trigger: TACCATTAGATGCCAGGCCCAGACAGTTGATGAAAA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACGCTGCCCTCTTTCTATaGAAACAGCAATCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENAALFL*KQQSPV
Trigger: AACTGGAGATTGCTGTTTCCATAGAAAGAGGGCAGC...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCGGATATCTGGACTATaGGGACTGTTACCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITRISGL*GLLPGY
Trigger: ATACCCGGGTAACAGTCCTCATAGTCCAGATATCCG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR TCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGCGAATTCCGGATTTCTaGTTGTGGGGTCTGAACCCC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRRIPDF*LWGLNP
Trigger: GGGGTTCAGACCCCACAATCAGAAATCCGGAATTCG...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSWIMEL*EVTVCS
Trigger: GGAGCACACAGTCACCTCTCACAGCTCCATTATCCA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGAGACCTTTCCCCTTaGCACCTCTTCCTCGGCTTT +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPGDLSP*HLFLGF
Trigger: AAAGCCGAGGAAGAGGTGGCAAGGGGAAAGGTCTCC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCTCCTTGATGATGTCTTaGCATTTCTCATTGGACTGC +
Preference number: 4 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTSLMMS*HFSLDC
Trigger: GCAGTCCAATGAGAAATGGCAAGACATCATCAAGGA...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAACCAGGGCCGTTGGGTaGCTCTTGGAACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPTRAVG*LLEQDL
Trigger: AAGATCCTGTTCCAAGAGGCACCCAACGGCCCTGGT...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLYWRH*SSKYWR
Trigger: GCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGAGCCAGCAACATCTTaGGCTTGTACTGGCGACACT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSEPATS*ACTGDT
Trigger: AGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGTCTCCAGCAAGTGTaGTCGCAGAGCCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPGLQQV*SQSLVL
Trigger: CAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACC...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITILRLY*RHCSSK
Trigger: CTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGAT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACATCCTTGTTGGTTTTaGGGTACAGTGCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTHPCWF*GTVQTD
Trigger: GTCTGTTTGCACTGTACCCCAAAACCAACAAGGATG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCTCTAGATTTGGGCTaGAAGGGCTGGAGTCAGCTA +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSALDLG*KGWSQL
Trigger: TAGCTGACTCCAGCCCTTCCAGCCCAAATCTAGAGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACATGTTAAAGAGCGGTaGTTTCCGTTCAGCTACAGA +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTHVKER*FPFSYR
Trigger: TCTGTAGCTGAACGGAAACCACCGCTCTTTAACATG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGAACGGGATGGAGACTaGATCCGATATTTGAACGCC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRERDGD*IRYLNA
Trigger: GGCGTTCAAATATCGGATTCAGTCTCCATCCCGTTC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTCTGGAGAAACTTCACTaGGTCGTGGGAGATAAAGTG +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITLEKLH*VVGDKV
Trigger: CACTTTATCTCCCACGACTCAGTGAAGTTTCTCCAG...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR TCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCAAACCCCAATTCCTTaGCTTCCTTGCCACATGACC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSQTPIP*LPCHMT
Trigger: GGTCATGTGGCAAGGAAGTCAAGGAATTGGGGTTTG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCCTTGATGATGTCTTaGCATTTCTCATTGGACTGC +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTSLMMS*HFSLDC
Trigger: GCAGTCCAATGAGAAATGGCAAGACATCATCAAGGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGGTACTGAATGGTGTTaGGATGCCGGAGCTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRGTEWC*DAGASV
Trigger: TACAGAAGCTCCGGCATCCCAACACCATTCAGTACC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCCTTCACATCCCTATaGATCATGTTGTGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRAFTSL*IMLWEC
Trigger: GCACTCCCACAACATGATCCATAGGGATGTGAAGGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCATCCTTGGTCCTCTaGATCAGGTCCATGATGACT +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRASLVL*IRSMMT
Trigger: AGTCATCATGGACCTGATCCAGAGGACCAAGGATGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCGTTGGGTGCCTCTTaGAACAGGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPLGAS*NRIFFI
Trigger: GATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGGAAGCCATCCTTGTTaGTTTTGGGGTACAGTGCAA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITGSHPC*FWGTVQ
Trigger: TTGCACTGTACCCCAAAACCAACAAGGATGGCTTCC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAACTTCACTGAGTCGTaGGAGATAAAGTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: HTQRANSNNLGEERQENTNFTES*EIKCSM
Trigger: CATTGAGCACTTTATCTCCCACGACTCAGTGAAGTT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTTGTACTGCCGAGTCTaGATCTTACACGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRLYCRV*ILHVSW
Trigger: CCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCATCTTGTGCTGAGCTTTaGGCGTGGTCTCCAGCAAGT +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPSCAEL*AWSPAS
Trigger: ACTTGCTGGAGACCACGCCCAAAGCTCAGCACAAGA...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGATCTCTGAGATGGACTaGTCATACTGCTCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRISEMD*SYCSAK
Trigger: CTTGGCGGAGCAGTATGACCAGTCCATCTCAGAGAT...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGTTGAGAGTATGCAGTaGGCCTTCAAGCTAGCATAT +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITVESMQ*AFKLAY
Trigger: ATATGCTAGCTTGAAGGCTCACTGCATACTCTCAAC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR TCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTACAATGGAATGGAACTaGGACGACTTGGGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITTMEWN*DDLGSN
Trigger: GTTTGAACCCAAGTCGTCTCAGTTCCATTCCATTGT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCAGCAATCTCCAGTTTaGCACATCCTTCTCCACACT +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSQQSPV*HILLHT
Trigger: AGTGTGGAGAAGGATGTGGCAAACTGGAGATTGCTG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACCGTTGGGTGCCTCTTaGAACAGGATCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPPLGAS*NRIFFI
Trigger: GATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CCA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCATCAAAGTATTAACTaGTATAAGAGGGAAACAGGG +
Preference number: 4 (lower is better)
Translates to: EHTQRANSNNLGEERQENHQSIN*YKRETG
Trigger: CCCTGTTTCCCTCTTATACCAGTTAATACTTTGATG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCATCCTTGTTGGTTTTaGGGTACAGTGCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSHPCWF*GTVQTD
Trigger: GTCTGTTTGCACTGTACCCCAAAACCAACAAGGATG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR GCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCCTTGATGATGTCTTaGCATTTCTCATTGGACTGC +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSLMMS*HFSLDC
Trigger: GCAGTCCAATGAGAAATGGCAAGACATCATCAAGGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR GCA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGAGATAAGCATTAGCTaGCCTCTTTCTATGGAAACA +
Preference number: 4 (lower is better)
Translates to: PESMRVRMSTHSGRTAITEISIS*PLSMET
Trigger: TGTTTCCATAGAAAGAGGGCAGCTAATGCTTATCTC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CCA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAACTTCACTGAGTCGTaGGAGATAAAGTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSNFTES*EIKCSM
Trigger: CATTGAGCACTTTATCTCCCACGACTCAGTGAAGTT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CCA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGC +
Preference number: 4 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPILHVS*NCFLIC
Trigger: GCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGAT...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 90 bp TGGCGGGTGCGTGACCTCCGCCCGGCTAGAGTCCCTGGCAGTGGCTaGCGGGAGGCAGGGGGCCCTAGCTGGCGCTGGCTGCGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: WRVRDLRPARVPGSG*REAGGPSWRWLRGS
Trigger: ACTACCACGCAGCCAGCGCCAGCTAGGGCCCCCTGCCTCCCGCCAGCCACTGCCAGGGACTCTAGCCGGGCGGAGGTCACGCACCCGCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS TCA 90 bp GCCAAGCTAAGAGCCAGGCAGCTCCAAGGCCCAGGGGAACACCCATaGGGCCTCGGCGCCAGCTCAGGCCCAGGACGGCCCCCAGTGCGG +
Preference number: 5 (lower is better)
Translates to: AKLRARQLQGPGEHP*GLGASSGPGRPPVR
Trigger: CCGCACTGGGGGCCGTCCTGGGCCTGAGCTGGCGCCGAGGCCTCATGGGTGTTCCCCTGGGCCTTGGAGCTGCCTGGCTCTTAGCTTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp CCATGGGTGACAGGCGCAGCAGAACCCGCAACCAGAGTCGAGATATaGCCCGGCGCACCCGGGGGCCCTGCTGCCGCACCCATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: PWVTGAAEPATRVEI*PGAPGGPAAAPICP
Trigger: GGGGCAGATGGGTGCGGCAGCAGGGCCCCCGGGTGCGCCGGGGCATATCTCGACTCTGGTTGCGGGTTCTGCTGCGCCTGTCACCCATGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp CGCCGCAGCAGCCCTGCTTCCTCCTCCGCCTGGCACTGCTGGAGCTaGTCCTTCTGCCGCAGCAGCCACTCGGCCTTCTCCCGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RRSSPASSSAWHCWS*SFCRSSHSAFSRLG
Trigger: TCCCAAGCGGGAGAAGGCCGAGTGGCTGCTGCGGCAGAAGGAGCAGCTCCAGCAGTGCCAGGCGGAGGAGGAAGCAGGGCTGCTGCGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS-3UTR CAA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGTCGGCCTTCTCCCGCTaGGGAGTGCTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQSAFSR*GVLGFS
Trigger: GGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCGA...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 90 bp TCTGCCTCTGCCCCAAAGCCAGCCCGCTGCGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCCTCCCGTTCACCCCTCAGCCGTGAC +
Preference number: 5 (lower is better)
Translates to: SASAPKPARCASSSR*SRALCSSRSPLSRD
Trigger: GTCACGGCTGAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGGGGCAGAGGCAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp TCCTCGGCCTGGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCTGCCTCTGCCCCAAAGCCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: SSAWAARASFSPMAW*RRASFSASAPKPAR
Trigger: GCGGGCTGGCTTTGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp ACAGGACCCAGACCCTTGCCAACAGAGCTAATGGGTGTTGGGTGGTaGGGGGATTACGCCGCCGGGGCCCAGGGACGGGCAGGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: TGPRPLPTELMGVGW*GDYAAGAQGRAGGC
Trigger: GCAGCCGCCTGCCCGTCCCTGGGCCCCGGCGGCGTAATCCCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp CGCTCCTCGGCCTGGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTaGTGCCGCCGGGCCAGCTTTTCTGCCTCTGCCCCAAAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: RSSAWAARASFSPMA*CRRASFSASAPKPA
Trigger: GGCTGGCTTTGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp CCTCGGCGCCAGCTCAGGCCCAGGACGGCCCCCAGTGCGGTACCCTaGGCCAGGAGTAGGAAAAGACTGGAGGGCAGGTGCAGGGCTGTA +
Preference number: 5 (lower is better)
Translates to: PRRQLRPRTAPSAVP*ARSRKRLEGRCRAV
Trigger: TACAGCCCTGCACCTGCCCTCCAGTCTTTTCCTACTCCTGGCCCAGGGTACCGCACTGGGGGCCGTCCTGGGCCTGAGCTGGCGCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp TGCACAGGACCCAGACCCTTGCCAACAGAGCTAATGGGTGTTGGGTaGTGCGGGGATTACGCCGCCGGGGCCCAGGGACGGGCAGGCGGC +
Preference number: 5 (lower is better)
Translates to: CTGPRPLPTELMGVG*CGDYAAGAQGRAGG
Trigger: GCCGCCTGCCCGTCCCTGGGCCCCGGCGGCGTAATCCCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp TGCCTCCTTCTCACCTATGGCCTGGTGCCGCCGGGCCAGCTTTTCTaGCTCTGCCCCAAAGCCAGCCCGCTGCGCCTCAAGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: CLLLTYGLVPPGQLF*LCPKASPLRLKLPL
Trigger: CAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp CCCTTGCACAGGACCCAGACCCTTGCCAACAGAGCTAATGGGTGTTaGGTGGTGCGGGGATTACGCCGCCGGGGCCCAGGGACGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PLHRTQTLANRANGC*VVRGLRRRGPGTGR
Trigger: CCTGCCCGTCCCTGGGCCCCGGCGGCGTAATCCCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp AGCAGGCCCCAGCTGGCCAGTGTGTGGATGGCCCACGGGGGCAAGTaGGATGCTAAACCCTGGCTGGCCCGTGCCAGACGCCAGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SRPQLASVWMAHGGK*DAKPWLARARRQFQ
Trigger: CTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCATCCACACACTGGCCAGCTGGGGCCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS-3UTR CAA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCTCCAAGGTCCTTCCCTaGTTTCCCCGCCCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: GSQAALRHLSPSWPWATGSKVLP*FPRPSP
Trigger: AGGGCTGGGGCGGGGAAACAAGGGAAGGACCTTGGA...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 90 bp GCCTCCAGCAGGGCAGCCAGCTCCTTCTTCTGCTGCCCAAGGATGTaGTGCTGGAACTTCCGCTCCTCGGCCTGGGCAGCTCGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: ASSRAASSFFCCPRM*CWNFRSSAWAARAS
Trigger: GGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCAGAAGAAGGAGCTGGCTGCCCTGCTGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp CCGCATCGAAGGCCTCGATCTCACGGGCCTGCCGCTCAAGCAGACTaGGGATTCGCTCGGAGCGTCCTGTCTGCAGGGCCAGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PHRRPRSHGPAAQAD*GFARSVLSAGPAAP
Trigger: AGGAGCTGCTGGCCCTGCAGACAGGACGCTCCGAGCGAATCCGCAGTCTGCTTGAGCGGCAGGCCCGTGAGATCGAGGCCTTCGATGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS GCA 90 bp CAGGGGGTGGAGCAGGATAGCCCTGGGCAGCAGCTTCAGCCGGGATaGCCCCCAGAGCCATGCTGGAGAAGCCCAGCCTCATGCTTTCCG +
Preference number: 5 (lower is better)
Translates to: QGVEQDSPGQQLQPG*PPEPCWRSPASCFP
Trigger: CGGAAAGCATGAGGCTGGGCTTCTCCAGCATGGCTCTGGGGGGCATCCCGGCTGAAGCTGCTGCCCAGGGCTATCCTGCTCCACCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS CCA 90 bp ACTTCCGCTCCTCGGCCTGGGCAGCTCGTGCCTCCTTCTCACCTATaGCCTGGTGCCGCCGGGCCAGCTTTTCTGCCTCTGCCCCAAAGC +
Preference number: 5 (lower is better)
Translates to: TSAPRPGQLVPPSHL*PGAAGPAFLPLPQS
Trigger: GCTTTGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp GCCAGTGTGTGGATGGCCCACGGGGGCAAGTGGGATGCTAAACCCTaGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTTGCACAGGACC +
Preference number: 5 (lower is better)
Translates to: ASVWMAHGGKWDAKP*LARARRQFQPLHRT
Trigger: GGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCATCCACACACTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp TTCTGCTGCCCAAGGATGTGCTGCTGGAACTTCCGCTCCTCGGCCTaGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTGGTGCCGCCGG +
Preference number: 5 (lower is better)
Translates to: FCCPRMCCWNFRSSA*AARASFSPMAWCRR
Trigger: CCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCAGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp GGACGGCCCCCAGTGCGGTACCCTGGGCCAGGAGTAGGAAAAGACTaGAGGGCAGGTGCAGGGCTGTACAAAGGAGCAGGTAGGAGGCCC +
Preference number: 5 (lower is better)
Translates to: GRPPVRYPGPGVGKD*RAGAGLYKGAGRRP
Trigger: GGGCCTCCTACCTGCTCCTTTGTACAGCCCTGCACCTGCCCTCCAGTCTTTTCCTACTCCTGGCCCAGGGTACCGCACTGGGGGCCGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp GTGTGTGGATGGCCCACGGGGGCAAGTGGGATGCTAAACCCTGGCTaGCCCGTGCCAGACGCCAGTTCCAGCCCTTGCACAGGACCCAGA +
Preference number: 5 (lower is better)
Translates to: VCGWPTGASGMLNPG*PVPDASSSPCTGPR
Trigger: TCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCATCCACACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp TCCAGCAGGGCAGCCAGCTCCTTCTTCTGCTGCCCAAGGATGTGCTaGTGGAACTTCCGCTCCTCGGCCTGGGCAGCTCGTGCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSRAASSFFCCPRMC*WNFRSSAWAARASF
Trigger: GAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCAGAAGAAGGAGCTGGCTGCCCTGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp ATCTTGCGCTTGTACTGGCGACACTGCAGCTCAAAGTACTGGCGCTaGCGCCGCAGCAGCCCTGCTTCCTCCTCCGCCTGGCACTGCTGG +
Preference number: 5 (lower is better)
Translates to: ILRLYWRHCSSKYWR*RRSSPASSSAWHCW
Trigger: CCAGCAGTGCCAGGCGGAGGAGGAAGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCGGCACCAGGGCCGTaGGGTGCCTCTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSAPGP*GASWNR
Trigger: CCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCGGCCTTCTCCCGCTaGGGAGTGCTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSAFSR*GVLGFS
Trigger: GGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGGCTCCCAGGCAGCCTaGAGGCACCTATCGCCAAGC +
Preference number: 5 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGGSQAA*RHLSPS
Trigger: GCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 90 bp AGGCTGTGCCGAGCCAGCAACATCTTGCGCTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGCTGCCGCCGCAGCAGCCCTGCTTCC +
Preference number: 5 (lower is better)
Translates to: RLCRASNILRLYWRH*SSKYWRCRRSSPAS
Trigger: GGAAGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp AGCAGGGCAGCCAGCTCCTTCTTCTGCTGCCCAAGGATGTGCTGCTaGAACTTCCGCTCCTCGGCCTGGGCAGCTCGTGCCTCCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SRAASSFFCCPRMCC*NFRSSAWAARASFS
Trigger: TGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGTTCCAGCAGCACATCCTTGGGCAGCAGAAGAAGGAGCTGGCTGCCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp AGCAACATCTTGCGCTTGTACTGGCGACACTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGCCCTGCTTCCTCCTCCGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SNILRLYWRHCSSKY*RCRRSSPASSSAWH
Trigger: GTGCCAGGCGGAGGAGGAAGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp TCCTGGTCCAGGCTGTGCCGAGCCAGCAACATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAGTACTGGCGCTGCCGCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SWSRLCRASNILRLY*RHCSSKYWRCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 90 bp CGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGCCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: RWPARTLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000566552.1
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAATTGCGGTACTGCAGGTaGTCCAGCTCCCGCACGGCA +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQLRYCR*SSSRTA
Trigger: TGCCGTGCGGGAGCTGGACAACCTGCAGTACCGCAA...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGAGGCGGGGCTCCCAGAGGATCTTCTTCATCTaGCGGTACTGCAGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: PRWRRETPGTMVGRRGSQRIFFI*RYCRLS
Trigger: GGACAACCTGCAGTACCGCAAGATGAAGAAGATCCT...CTGGGAGCCCCGCCTCCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCGGCCTTCTCCCGCTaGGGAGTGCTGGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSAFSR*GVLGFS
Trigger: GGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS TCA 90 bp CTCCTCGCCAAGCATTCTTTGGTCCAGGACTGCCTCCTGGCCAGGTaGGCAGGGCTGCTGTTCTATAGGGGTGCCTGTGTTGGGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LLAKHSLVQDCLLAR*AGLLFYRGACVGWA
Trigger: GGCCCACCCAACACAGGCACCCCTATAGAACAGCAGCCCTGCTCACCTGGCCAGGAGGCAGTCCTGGACCAAAGAATGCTTGGCGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000566552.1
CDS TCA 90 bp TGCTCCTCCCCGCTGCACCTCAGGAATAGAAGTGGGAAGAACCATTaGGGATGTGGGAAGCGACACTGGTGCTGCGGCTCAGGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: CSSPLHLRNRSGKNH*GCGKRHWCCGSGAR
Trigger: CCGGGCCCCTGAGCCGCAGCACCAGTGTCGCTTCCCACATCCTCAATGGTTCTTCCCACTTCTATTCCTGAGGTGCAGCGGGGAGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS CCA 90 bp GTGGCCTCGTGCTGCCGAAGCAGCAGTGCACACTCCAAGTCCTTCTaGGTCTGCTTCTTGTTCAGGTCCTCCCGCAGCAGGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VASCCRSSSAHSKSF*VCFLFRSSRSRSWS
Trigger: GGACCAGGACCTGCTGCGGGAGGACCTGAACAAGAAGCAGACCCAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAGCACGAGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGTGCCCACGAAGGAGTaGGCAGGTGCCATGATGGAC +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQVPTKE*AGAMMD
Trigger: GTCCATCATGGCACCTGCCAACTCCTTCGTGGGCAC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCCGCACGGCATCCTaGGTCCTCTGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSRTAS*VLWIRS
Trigger: GGACCTGATCCAGAGGACCAAGGATGCCGTGCGGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACATCTCCCTCCTTTCCTAGGTGGCGGAGGGAGACCCCTGGCACCATGGTAGGGGCATCTGCTAGGCTGTaGACGGAGCTGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TSPSFPRWRRETPGTMVGASARL*TELLWL
Trigger: CAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATGC...CCCTACCATGGTGCCAGGGGTCTCCCTCCGCCACCTAGGAAAGGAGGGAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAACGTACTTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQRTLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACG...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTGGCCTGCACGTACTTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSWPART*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCCAGTTTATTAAAAGCTaGCCTGGGGCTCTGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GSQAALRHLSPSWPWATGQFIKS*PGALCQ
Trigger: CTGGCACAGAGCCCCAGGCAAGCTTTTAATAAACTG...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTCTCTTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLSLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGAGAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS GCA 90 bp TGCTTCTTGTTCAGGTCCTCCCGCAGCAGGTCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTGCGCTTGTACTGGCGACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: CFLFRSSRSRSWSRL*RASNILRLYWRHCS
Trigger: GCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGAGGACCTGAACAAGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 90 bp ATGCTAAACCCTGGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTTaGACAGGACCCAGACCCTTGCCAACAGAGCTAATGGGTGTTGGG +
Preference number: 5 (lower is better)
Translates to: MLNPGWPVPDASSSP*TGPRPLPTELMGVG
Trigger: CCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS-3UTR CAA 90 bp GGCTCCCAGGCAGCCTTGAGGCACCTATCGCCAAGCTGGCCCTGGGCCACTGGCAAGAACCGCACCTCCTaGATGATGTCTTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: GSQAALRHLSPSWPWATGKNRTS*MMSCHF
Trigger: GAAATGGCAAGACATCATCAAGGAGGTGCGGTTCTT...GCCAGTGGCCCAGGGCCAGCTTGGCGATAGGTGCCTCAAGGCTGCCTGGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGTGCCCACGAAGGAGTaGGCAGGTGCCATGATGGAC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTVPTKE*AGAMMD
Trigger: GTCCATCATGGCACCTGCCAACTCCTTCGTGGGCAC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCTCCCGCACGGCATCCTaGGTCCTCTGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTSRTAS*VLWIRS
Trigger: GGACCTGATCCAGAGGACCAAGGATGCCGTGCGGGA...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACTCCCGCACGGCATCCTaGGTCCTCTGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: EHTQRANSNNLGEERQENSRTAS*VLWIRS
Trigger: GGACCTGATCCAGAGGACCAAGGATGCCGTGCGGGA...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCGGCACCAGGGCCGTaGGGTGCCTCTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTSAPGP*GASWNR
Trigger: CCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTGGGTCATCATATAGGTaGTCAGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCTGACAACCTATATGATGACCC...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCGAGCCAGCAACATCTaGCGCTTGTACTGGCGACAC +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSRASNI*RLYWRH
Trigger: GTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCGTACTTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRTLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTCGCCAAGCATTCTTaGGTCCAGGACTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLAKHS*VQDCLL
Trigger: CAGGAGGCAGTCCTGGACCAAAGAATGCTTGGCGAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS GCA 90 bp CGCAGCGCCTGTGAGCTGAGCATCTCTGAGATGGACTGGTCATACTaGTCCGCCAAGATCGCCAGCTTGCGGGTCTGCTCTTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RSACELSISEMDWSY*SAKIASLRVCSSLS
Trigger: GCTCAAGGAAGAGCAGACCCGCAAGCTGGCGATCTTGGCGGAGCAGTATGACCAGTCCATCTCAGAGATGCTCAGCTCACAGGCGCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 90 bp AAGCTCCATGTCCCAGCCTCCTCCTGGCCAACAATGCTCCTCTCCTaGGGTACAAGGGAGGGCACCCTAAGCTCCTCTATCTCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: KLHVPASSWPTMLLS*GTREGTLSSSISSG
Trigger: GCCTGAGGAGATAGAGGAGCTTAGGGTGCCCTCCCTTGTACCCCAGGAGAGGAGCATTGTTGGCCAGGAGGAGGCTGGGACATGGAGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000566552.1
CDS CCA 90 bp CCAACAATGCTCCTCTCTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGCCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PTMLLSLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGAGAGGAGCATTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAGGAGACCTTTCCCCTaGCCACCTCTTCCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRRPFP*PPLPRL
Trigger: AAGCCGAGGAAGAGGTGGCAAGGGGAAAGGTCTCCT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCGTGCCCACGAAGGAGTaGGCAGGTGCCATGATGGAC +
Preference number: 5 (lower is better)
Translates to: DPILILPASKVASHSPCLVPTKE*AGAMMD
Trigger: GTCCATCATGGCACCTGCCAACTCCTTCGTGGGCAC...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATTGCGGTACTGCAGGTaGTCCAGCTCCCGCACGGCA +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTLRYCR*SSSRTA
Trigger: TGCCGTGCGGGAGCTGGACAACCTGCAGTACCGCAA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTTCCTCCTCTTCCTCGTaGTCTGAGGCATCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSSSSSS*SEASAR
Trigger: CCTAGCAGATGCCTCAGACAACGAGGAAGAGGAGGA...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCGGGTCATCATATAGGTaGTCAGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: DPILILPASKVASHSPCLGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCTGACAACCTATATGATGACCC...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCGAGCCAGCAACATCTaGCGCTTGTACTGGCGACAC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRASNI*RLYWRH
Trigger: GTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTCTTCTGCCGCAACTCTaGCTCACGCCGCTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSLLPQL*LTPLVV
Trigger: TACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAG...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTCGCCAAGCATTCTTaGGTCCAGGACTGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLAKHS*VQDCLL
Trigger: CAGGAGGCAGTCCTGGACCAAAGAATGCTTGGCGAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAGAATCCTCTGCTGCTaGGGCTCCAAAGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRILCC*GSKVAP
Trigger: AGGGGCCACTTTGGAGCCCAAGCAGCAGAGGATTCT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACAGGACCCAGACCCTaGCCAACAGAGCTAATGGGT +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQTGPRP*PTELMG
Trigger: ACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTGTGCTCGCAGAGCCTaGTACTGCCGAGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKCARRA*YCRVWI
Trigger: GATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 90 bp ATCTGCAGCTCCTTAGATTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGCCGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ICSSLDLRLLGCWRT*AACFCRNSCSRRLL
Trigger: CAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCTAAGGAGCTGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp CAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCAGGAGACCTTTCCCCTaGCCACCTCTTCCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: QDGTGRQTVTGRDPGILTRRPFP*PPLPRL
Trigger: AAGCCGAGGAAGAGGTGGCAAGGGGAAAGGTCTCCT...GGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAGCCGTTGGGTGCCTCTaGGAACAGGATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQAVGCL*EQDLLH
Trigger: ATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGGC...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp ACAGCTGAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGCCGTTGGGTGCCTCTaGGAACAGGATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: TAEEAACLEVRRAGPGVSAVGCL*EQDLLH
Trigger: ATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGGC...ACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGCATCTGCTAGGCTGTaGACGGAGCTGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTASARL*TELLWL
Trigger: CAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATGC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAGGGTCATCATATAGGTaGTCAGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCTGACAACCTATATGATGACCC...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAGCAACATCTTGCGCTaGTACTGGCGACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSNILR*YWRHCS
Trigger: GCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCTTCTGCCGCAACTCTaGCTCACGCCGCTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTLLPQL*LTPLVV
Trigger: TACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACAGGACCCAGACCCTaGCCAACAGAGCTAATGGGT +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTGPRP*PTELMG
Trigger: ACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCAGGCATCCTGACCCCAAGTGCAGCTCCTTAGATTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RHRTSDSYGKRPRHPDPKCSSLD*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAATCTAAGGAGCTGCA...CTTGGGGTCAGGATGCCTGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS TCA 90 bp TCATATAGGTTGTCAGAGCCCGGCAGCCGGTGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCCCCCTCCTGCATCATGGCCATCTCC +
Preference number: 5 (lower is better)
Translates to: SYRLSEPGSRWIMEL*EVTVCSPSCIMAIS
Trigger: GGAGATGGCCATGATGCAGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCATTATCCACCGGCTGCCGGGCTCTGACAACCTATATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS GCA 90 bp TCCAGCCTTCACATCCCTATGGATCATGTTGTGGGAGTGCAGATATaGCAGGCCCTGAAGCGCCCCGTGGGTCACAGCTGCGATCTCTAC +
Preference number: 5 (lower is better)
Translates to: SSLHIPMDHVVGVQI*QALKRPVGHSCDLY
Trigger: GTAGAGATCGCAGCTGTGACCCACGGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCACAACATGATCCATAGGGATGTGAAGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCCCGCACGGCATCCTaGGTCCTCTGGATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSRTAS*VLWIRS
Trigger: GGACCTGATCCAGAGGACCAAGGATGCCGTGCGGGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTCGGCACCAGGGCCGTaGGGTGCCTCTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRSAPGP*GASWNR
Trigger: CCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCGA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCGGCACCAGGGCCGTaGGGTGCCTCTTGGAACAGG +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSAPGP*GASWNR
Trigger: CCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCAGCAACATCTTGCGCTaGTACTGGCGACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: DPILILPASKVASHSPCLSNILR*YWRHCS
Trigger: GCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCT...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCCTTCTGCCGCAACTCTaGCTCACGCCGCTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: DPILILPASKVASHSPCLLLPQL*LTPLVV
Trigger: TACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAG...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 90 bp AAGGAGGCTCTTGTGCTGAGCTTTGGGCGTGGTCTCCAGCAAGTGTaGTCGCAGAGCCTTGTACTGCCGAGTCTGGATCTTACACGTCTC +
Preference number: 5 (lower is better)
Translates to: KEALVLSFGRGLQQV*SQSLVLPSLDLTRL
Trigger: GAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCACGCCCAAAGCTCAGCACAAGAGCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAAAGAACCGCACCTCCTaGATGATGTCTTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: EEAACLEVRRAGPGVSEQKNRTS*MMSCHF
Trigger: GAAATGGCAAGACATCATCAAGGAGGTGCGGTTCTT...TTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTTCCCTATGGATCATGTaGTGGGAGTGCAGATATGCC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTSLWIM*WECRYA
Trigger: GGCATATCTGCACTCCCACAACATGATCCATAGGGA...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGTTGCGGTACTGCAGGTaGTCCAGCTCCCGCACGGCA +
Preference number: 5 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRLRYCR*SSSRTA
Trigger: TGCCGTGCGGGAGCTGGACAACCTGCAGTACCGCAA...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTTGCGGTACTGCAGGTaGTCCAGCTCCCGCACGGCA +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLRYCR*SSSRTA
Trigger: TGCCGTGCGGGAGCTGGACAACCTGCAGTACCGCAA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAGGATCTTCTTCATCTaGCGGTACTGCAGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTRIFFI*RYCRLS
Trigger: GGACAACCTGCAGTACCGCAAGATGAAGAAGATCCT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTGGGTCATCATATAGGTaGTCAGAGCCCGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: PESMRVRMSTHSGRTAITGSSYR*SEPGSR
Trigger: CCGGCTGCCGGGCTCTGACAACCTATATGATGACCC...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAGCAACATCTTGCGCTaGTACTGGCGACACTGCAGC +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTSNILR*YWRHCS
Trigger: GCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCTCAATGCTCTAGATTaGGGCTGGAAGGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: EHTQRANSNNLGEERQENLNALD*GWKGWS
Trigger: ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTACAGCAATCTCCAGTTaGCCACATCCTTCTCCACAC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTTAISS*PHPSPH
Trigger: GTGTGGAGAAGGATGTGGCAAACTGGAGATTGCTGT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 90 bp CCAGGTTTAGAGAGGTTGGGACCCGAGTCCCGGATATCTGGACTATaGGGACTGTTACCCGGGTATCTGAGAAAGGAGGAGGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: PGLERLGPESRISGL*GLLPGYLRKEEGQS
Trigger: GCTTTGCCCCTCCTCCTTTCTCAGATACCCGGGTAACAGTCCTCATAGTCCAGATATCCGGGACTCGGGTCCCAACCTCTCTAAACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS GCA 90 bp GCTTTGGGCGTGGTCTCCAGCAAGTGTGCTCGCAGAGCCTTGTACTaGCGAGTCTGGATCTTACACGTCTCCTGGAACTGCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: ALGVVSSKCARRALY*RVWILHVSWNCFLI
Trigger: GATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCACGCCCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 90 bp CAGAGACCCAGGTTTAGAGAGGTTGGGACCCGAGTCCCGGATATCTaGACTATGAGGACTGTTACCCGGGTATCTGAGAAAGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QRPRFREVGTRVPDI*TMRTVTRVSEKGGG
Trigger: CCCTCCTCCTTTCTCAGATACCCGGGTAACAGTCCTCATAGTCCAGATATCCGGGACTCGGGTCCCAACCTCTCTAAACCTGGGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS CCA 90 bp GTGGTCTCCAGCAAGTGTGCTCGCAGAGCCTTGTACTGCCGAGTCTaGATCTTACACGTCTCCTGGAACTGCTTCTTGATCTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VVSSKCARRALYCRV*ILHVSWNCFLICSS
Trigger: GGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTAAGAACCGCACCTCCTaGATGATGTCTTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTKNRTS*MMSCHF
Trigger: GAAATGGCAAGACATCATCAAGGAGGTGCGGTTCTT...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACAGGATCTTCTTCATCTaGCGGTACTGCAGGTTGTCC +
Preference number: 5 (lower is better)
Translates to: EHTQRANSNNLGEERQENRIFFI*RYCRLS
Trigger: GGACAACCTGCAGTACCGCAAGATGAAGAAGATCCT...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCATCTGCTAGGCTGTaGACGGAGCTGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSASARL*TELLWL
Trigger: CAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GAGGCTGCCTGTCTAGAGGTCCGAAGGGCTGGGCCTGGGGTAAGTGAGCAAACTCCATCCTTGTTGGTTTaGGGGTACAGTGCAAACAGA +
Preference number: 5 (lower is better)
Translates to: EAACLEVRRAGPGVSEQTPSLLV*GYSANR
Trigger: TCTGTTTGCACTGTACCCCAAAACCAACAAGGATGG...AGTTTGCTCACTTACCCCAGGCCCAGCCCTTCGGACCTCTAGACAGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACGGAAGCCATCCTTGTaGGTTTTGGGGTACAGTGCA +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTRKPSL*VLGYSA
Trigger: TGCACTGTACCCCAAAACCAACAAGGATGGCTTCCG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACTCAATGCTCTAGATTaGGGCTGGAAGGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTLNALD*GWKGWS
Trigger: ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCCAAGATCGCCAGCTaGCGGGTCTGCTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRAKIAS*RVCSSL
Trigger: CAAGGAAGAGCAGACCCGCAAGCTGGCGATCTTGGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GAGCACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACCCTTGCCACATGACCTaGAGAAGTTCCCATCATCCT +
Preference number: 5 (lower is better)
Translates to: EHTQRANSNNLGEERQENPCHMT*RSSHHP
Trigger: AGGATGATGGGAACTTCTCAAGGTCATGTGGCAAGG...GTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCCAGGTTTAGAGAGGTaGGGACCCGAGTCCCGGATA +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSPGLER*GPESRI
Trigger: TATCCGGGACTCGGGTCCCAACCTCTCTAAACCTGG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAGGAGACCTTTCCCCTaGCCACCTCTTCCTCGGCTT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRRPFP*PPLPRL
Trigger: AAGCCGAGGAAGAGGTGGCAAGGGGAAAGGTCTCCT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTTCCTCCTCTTCCTCGTaGTCTGAGGCATCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: PESMRVRMSTHSGRTAITSSSSS*SEASAR
Trigger: CCTAGCAGATGCCTCAGACAACGAGGAAGAGGAGGA...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCGAGCCAGCAACATCTaGCGCTTGTACTGGCGACAC +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRASNI*RLYWRH
Trigger: GTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTAGAATCCTCTGCTGCTaGGGCTCCAAAGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRILCC*GSKVAP
Trigger: AGGGGCCACTTTGGAGCCCAAGCAGCAGAGGATTCT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GACCCCATCCTGATCCTTCCTGCCAGTAAGGTGGCCTCTCATTCTCCCTGCCTCTCCTGGAACTGCTTCTaGATCTGCAGCTCCTTAGAT +
Preference number: 5 (lower is better)
Translates to: DPILILPASKVASHSPCLSWNCF*ICSSLD
Trigger: ATCTAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGA...GAGGCAGGGAGAATGAGAGGCCACCTTACTGGCAGGAAGGATCAGGATGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS TCA 90 bp AGTCTTGAAGGCAACAGGGGGCCACTCATGGCTCCAAACAGGGAGTaGAATGACAGCACTGAGCTTAGGCAGACCTCTCTGGCATCAGTA +
Preference number: 5 (lower is better)
Translates to: SLEGNRGPLMAPNRE*NDSTELRQTSLASV
Trigger: TACTGATGCCAGAGAGGTCTGCCTAAGCTCAGTGCTGTCATTTCACTCCCTGTTTGGAGCCATGAGTGGCCCCCTGTTGCCTTCAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CAA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCACGAGCCAGCAACATCTaGCGCTTGTACTGGCGACAC +
Preference number: 5 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPRASNI*RLYWRH
Trigger: GTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCG...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTTCTGCCGCAACTCTaGCTCACGCCGCTTGTTGTA +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLLPQL*LTPLVV
Trigger: TACAACAAGCGGCGTGAGCAAGAGTTGCGGCAGAAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACACCATCCTTGTTGGTTTaGGGGTACAGTGCAAACAGA +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTPSLLV*GYSANR
Trigger: TCTGTTTGCACTGTACCCCAAAACCAACAAGGATGG...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000416441.2
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTACAGGACCCAGACCCTaGCCAACAGAGCTAATGGGT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSTGPRP*PTELMG
Trigger: ACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACATCAAACCCCAATTCCTaGACTTCCTTGCCACATGAC +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTSNPNS*TSLPHD
Trigger: GTCATGTGGCAAGGAAGTCAAGGAATTGGGGTTTGA...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTACAATGCTCCTCTCTTaGAGGCTCTTGGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSTMLLS*RLLGCW
Trigger: CCAGCAGCCCAAGAGCCTCAAAGAGAGGAGCATTGT...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS TCA 90 bp GATACTGGTGCACGCAGGGGCCTGAACCTGATATTTGAAATTCTATaGAACAGAGACCCAGGTTTAGAGAGGTTGGGACCCGAGTCCCGG +
Preference number: 5 (lower is better)
Translates to: DTGARRGLNLIFEIL*NRDPGLERLGPESR
Trigger: CCGGGACTCGGGTCCCAACCTCTCTAAACCTGGGTCTCTGTTTCATAGAATTTCAAATATCAGGTTCAGGCCCCTGCGTGCACCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS GCA 90 bp AGAGCCTTGTACTGCCGAGTCTGGATCTTACACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCCTTAGATTTGAGGCTCTTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RALYCRVWILHVSWN*FLICSSLDLRLLGC
Trigger: GCAGCCCAAGAGCCTCAAATCTAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 90 bp GCTCGCAGAGCCTTGTACTGCCGAGTCTGGATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGCAGCTCCTTAGATTTGAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ARRALYCRVWILHVS*NCFLICSSLDLRLL
Trigger: CAAGAGCCTCAAATCTAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp AGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTAGGTGGCGGGCCGTTGGGTGCCTCTaGGAACAGGATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: RGLDEYLTRTSPSFPRWRAVGCL*EQDLLH
Trigger: ATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGGC...CCGCCACCTAGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGCCGTTGGGTGCCTCTaGGAACAGGATCTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSAVGCL*EQDLLH
Trigger: ATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGGC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCATCCTCCTCTTCCTCGTaGTCTGAGGCATCTGCTAGG +
Preference number: 5 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPSSSSS*SEASAR
Trigger: CCTAGCAGATGCCTCAGACAACGAGGAAGAGGAGGA...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCGGAAGCCATCCTTGTaGGTTTTGGGGTACAGTGCA +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSRKPSL*VLGYSA
Trigger: TGCACTGTACCCCAAAACCAACAAGGATGGCTTCCG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTCTCAATGCTCTAGATTaGGGCTGGAAGGGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSLNALD*GWKGWS
Trigger: ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAG...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS-3UTR CAA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCATTAGATTTGAGGCTCTaGGGCTGCTGGCGAACCTGG +
Preference number: 5 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPLDLRL*GCWRTW
Trigger: CCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCTAA...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTGAAGTGGCTGGGAAGTaGAGAGTATGCAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSEVAGK*RVCSEP
Trigger: AGGCTCACTGCATACTCTCAACTTCCCAGCCACTTC...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 90 bp ATACAGTTAATTATTAACAAGTTACCTGGGAGAGGTGGGACTGGGTaGGAGAACAGCCTTGGGTGGGGCGTTTCCACTCTCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: IQLIINKLPGRGGTG*ENSLGWGVSTLHPL
Trigger: GAGAGGGTGGAGAGTGGAAACGCCCCACCCAAGGCTGTTCTCTCACCCAGTCCCACCTCTCCCAGGTAACTTGTTAATAATTAACTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS-3UTR CAA 90 bp GTCGTGGGAGATAAAGTGCTCAATGCTCTAGATTTGGGCTGGAAGGGCTGGAGTTCCCTATGGATCATGTaGTGGGAGTGCAGATATGCC +
Preference number: 5 (lower is better)
Translates to: VVGDKVLNALDLGWKGWSSLWIM*WECRYA
Trigger: GGCATATCTGCACTCCCACAACATGATCCATAGGGA...ACTCCAGCCCTTCCAGCCCAAATCTAGAGCATTGAGCACTTTATCTCCCACGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTGGACTAGATGAATATTaGACACGCACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPGLDEY*TRTSPS
Trigger: GGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCC...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp CACACACAGCGGGCGAACAGCAATAACTTAGGGGAGGAGCGCCAGGAGAACACAAAGGGAGCAGATAACTaGATAATTGCTATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HTQRANSNNLGEERQENTKGADN*IIAMGK
Trigger: CTTCCCCATAGCAATTATCAAGTTATCTGCTCCCTT...TGTGTTCTCCTGGCGCTCCTCCCCTAAGTTATTGCTGTTCGCCCGCTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 90 bp ATGAACCCCGGATACTGGTGCACGCAGGGGCCTGAACCTGATATTTaGAATTCTATGAAACAGAGACCCAGGTTTAGAGAGGTTGGGACC +
Preference number: 5 (lower is better)
Translates to: MNPGYWCTQGPEPDI*NSMKQRPRFREVGT
Trigger: GGTCCCAACCTCTCTAAACCTGGGTCTCTGTTTCATAGAATTTCAAATATCAGGTTCAGGCCCCTGCGTGCACCAGTATCCGGGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS-3UTR CAA 90 bp CCCTCCCCCAGGGGACTAGATGAATATTTGACACGCACATCTCCCTCCTTTCCTCTCCTTGATGATGTCTaGCCATTTCTCATTGGACTG +
Preference number: 5 (lower is better)
Translates to: PSPRGLDEYLTRTSPSFPLLDDV*PFLIGL
Trigger: CAGTCCAATGAGAAATGGCAAGACATCATCAAGGAG...AGGAAAGGAGGGAGATGTGCGTGTCAAATATTCATCTAGTCCCCTGGGGGAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp AAAGATAAAGGACAAGACGGCACAGGACGTCAGACAGTTACGGGAAGAGACCCATCCCTATGGATCATGTaGTGGGAGTGCAGATATGCC +
Preference number: 5 (lower is better)
Translates to: KDKGQDGTGRQTVTGRDPSLWIM*WECRYA
Trigger: GGCATATCTGCACTCCCACAACATGATCCATAGGGA...TGGGTCTCTTCCCGTAACTGTCTGACGTCCTGTGCCGTCTTGTCCTTTATCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS-3UTR CAA 90 bp CCTGAGTCAATGAGGGTGAGGATGAGCACACACAGCGGGCGAACAGCAATAACTAATTCCTTGACTTCCTaGCCACATGACCTTGAGAAG +
Preference number: 5 (lower is better)
Translates to: PESMRVRMSTHSGRTAITNSLTS*PHDLEK
Trigger: CTTCTCAAGGTCATGTGGCAAGGAAGTCAAGGAATT...AGTTATTGCTGTTCGCCCGCTGTGTGTGCTCATCCTCACCCTCATTGACTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 90 bp ATAAGAGGGAAACAGGGAAGTGGCTGGGAAGTTGAGAGTATGCAGTaGGCCTTCAAGCTAGCATATCTTCAGGGAATTCAGAGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: IRGKQGSGWEVESMQ*AFKLAYLQGIQRRA
Trigger: AGCCCTTCTCTGAATTCCCTGAAGATATGCTAGCTTGAAGGCTCACTGCATACTCTCAACTTCCCAGCCACTTCCCTGTTTCCCTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 90 bp AAGGTTTCAAGAAGCAGCGGTCTCAACATCTATCAGAATGGAAGATaGTCATACCCTGTGGCACAGCAATTACACTGCAGAATCTATCCC +
Preference number: 5 (lower is better)
Translates to: KVSRSSGLNIYQNGR*SYPVAQQLHCRIYP
Trigger: GGGATAGATTCTGCAGTGTAATTGCTGTGCCACAGGGTATGACCATCTTCCATTCTGATAGATGTTGAGACCGCTGCTTCTTGAAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS TCA 90 bp AGTATTAACTGGTATAAGAGGGAAACAGGGAAGTGGCTGGGAAGTTaGGAGTATGCAGTGAGCCTTCAAGCTAGCATATCTTCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: SINWYKRETGKWLGS*EYAVSLQASISSGN
Trigger: ATTCCCTGAAGATATGCTAGCTTGAAGGCTCACTGCATACTCTCAACTTCCCAGCCACTTCCCTGTTTCCCTCTTATACCAGTTAATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS GCA 90 bp TTGACTTCCTTGCCACATGACCTTGAGAAGTTCCCATCATCCTGTTaGGTCTCAGTTAATTCCTTCCTCTGTAAAATACAACACCCATCC +
Preference number: 5 (lower is better)
Translates to: LTSLPHDLEKFPSSC*VSVNSFLCKIQHPS
Trigger: GGATGGGTGTTGTATTTTACAGAGGAAGGAATTAACTGAGACGCAACAGGATGATGGGAACTTCTCAAGGTCATGTGGCAAGGAAGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 90 bp TATACTTGGGTCCGTTTCTTACATTTTTCATCAACTGTCTGGGCCTaGCATCTAATGGTAAATGGAGACTGTGAAGATGGAGGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: YTWVRFLHFSSTVWA*HLMVNGDCEDGGEG
Trigger: CCCTTCTCCTCCATCTTCACAGTCTCCATTTACCATTAGATGCCAGGCCCAGACAGTTGATGAAAAATGTAAGAAACGGACCCAAGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 90 bp TTTTCTTATACTTGGGTCCGTTTCTTACATTTTTCATCAACTGTCTaGGCCTGGCATCTAATGGTAAATGGAGACTGTGAAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: FSYTWVRFLHFSSTV*AWHLMVNGDCEDGG
Trigger: TCCTCCATCTTCACAGTCTCCATTTACCATTAGATGCCAGGCCCAGACAGTTGATGAAAAATGTAAGAAACGGACCCAAGTATAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS GCA 72 bp GCTGGCGGGAGGCAGGGGGCCCTAGCTGGCGCTGGCTaGGTGGTAGTAGCCGGGGGATTCGGGTGGGCCGTT +
Preference number: 6 (lower is better)
Translates to: AGGRQGALAGAG*VVVAGGFGWAV
Trigger: AACGGCCCACCCGAATCCCCCGGCTACTACCACGCAGCCAGCGCCAGCTAGGGCCCCCTGCCTCCCGCCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp AGTGGCTGGCGGGAGGCAGGGGGCCCTAGCTGGCGCTaGCTGCGTGGTAGTAGCCGGGGGATTCGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: SGWREAGGPSWR*LRGSSRGIRVG
Trigger: GCCCACCCGAATCCCCCGGCTACTACCACGCAGCCAGCGCCAGCTAGGGCCCCCTGCCTCCCGCCAGCCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp ACAGGCGCAGCAGAACCCGCAACCAGAGTCGAGATATaGCCCGGCGCACCCGGGGGCCCTGCTGCCGCACCC +
Preference number: 6 (lower is better)
Translates to: TGAAEPATRVEI*PGAPGGPAAAP
Trigger: GGGTGCGGCAGCAGGGCCCCCGGGTGCGCCGGGGCATATCTCGACTCTGGTTGCGGGTTCTGCTGCGCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp GGGCATGCCTGGTGGAGGAGGGCCATGGCTCCAGTGTaGCCCAGAACGGGGAACGGGACGGGAGGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GHAWWRRAMAPV*PRTGNGTGGPG
Trigger: GCCTGGCCCTCCCGTCCCGTTCCCCGTTCTGGGGCACACTGGAGCCATGGCCCTCCTCCACCAGGCATGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS GCA 72 bp GCCCCAAAGCCAGCCCGCTGCGCCTCAAGCTCCCGCTaGAGCCGTGCACTGTGCTCCTCCCGTTCACCCCTC +
Preference number: 6 (lower is better)
Translates to: APKPARCASSSR*SRALCSSRSPL
Trigger: GAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGCGCAGCGGGCTGGCTTTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp CAGCAGCGCTGCCTGCAGGCCACCCCCACCCTGGGCTaGCAGCAATGGAAGCAGCAGCAGCAGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: QQRCLQATPTLG*QQWKQQQQQEG
Trigger: CCCCTCCTGCTGCTGCTGCTGCTTCCATTGCTGGCAGCCCAGGGTGGGGGTGGCCTGCAGGCAGCGCTGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp CGCTGCGCCTCAAGCTCCCGCTGCAGCCGTGCACTGTaGTCCTCCCGTTCACCCCTCAGCCGTGACTCCAGG +
Preference number: 6 (lower is better)
Translates to: RCASSSRCSRAL*SSRSPLSRDSR
Trigger: CCTGGAGTCACGGCTGAGGGGTGAACGGGAGGAGCACAGTGCACGGCTGCAGCGGGAGCTTGAGGCGCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp GCCTGGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTaGTGCCGCCGGGCCAGCTTTTCTGCCTCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: AWAARASFSPMA*CRRASFSASAP
Trigger: TGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp CAGCTGGCCAGTGTGTGGATGGCCCACGGGGGCAAGTaGGATGCTAAACCCTGGCTGGCCCGTGCCAGACGC +
Preference number: 6 (lower is better)
Translates to: QLASVWMAHGGK*DAKPWLARARR
Trigger: GCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCATCCACACACTGGCCAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp GGGCGCTGGCCTGCACGTACTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCATGCTTCTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: GRWPARTLRLLG*WRTWAACFCRN
Trigger: GTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGCAGGCCAGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000566552.1
CDS GCA 72 bp AGACCCTTGCCAACAGAGCTAATGGGTGTTGGGTGGTaGGGGGATTACGCCGCCGGGGCCCAGGGACGGGCA +
Preference number: 6 (lower is better)
Translates to: RPLPTELMGVGW*GDYAAGAQGRA
Trigger: TGCCCGTCCCTGGGCCCCGGCGGCGTAATCCCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp AGGCCTCGATCTCACGGGCCTGCCGCTCAAGCAGACTaGGGATTCGCTCGGAGCGTCCTGTCTGCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: RPRSHGPAAQAD*GFARSVLSAGP
Trigger: TGGCCCTGCAGACAGGACGCTCCGAGCGAATCCGCAGTCTGCTTGAGCGGCAGGCCCGTGAGATCGAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS CCA 72 bp TGGCCCACGGGGGCAAGTGGGATGCTAAACCCTGGCTaGCCCGTGCCAGACGCCAGTTCCAGCCCTTGCACA +
Preference number: 6 (lower is better)
Translates to: WPTGASGMLNPG*PVPDASSSPCT
Trigger: TGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp TGGATGGCCCACGGGGGCAAGTGGGATGCTAAACCCTaGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTTG +
Preference number: 6 (lower is better)
Translates to: WMAHGGKWDAKP*LARARRQFQPL
Trigger: CAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATCCCACTTGCCCCCGTGGGCCATCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp TGGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTGGTaGCGCCGGGCCAGCTTTTCTGCCTCTGCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: WAARASFSPMAW*RRASFSASAPK
Trigger: CTTTGGGGCAGAGGCAGAAAAGCTGGCCCGGCGGCACCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp GCCGCAGCAGCCACTCGGCCTTCTCCCGCTTGGGAGTaGTGGGGTTCTCCTGGAGCTCCTCCTTCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: AAAATRPSPAWE*WGSPGAPPSAV
Trigger: AACAGCTGAAGGAGGAGCTCCAGGAGAACCCCAGCACTCCCAAGCGGGAGAAGGCCGAGTGGCTGCTGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp TCAAGCAGACTGCGGATTCGCTCGGAGCGTCCTGTCTaGAGGGCCAGCAGCTCCTCTTCCACCCGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSRLRIRSERPV*RASSSSSTRCS
Trigger: GGAGCAGCGGGTGGAAGAGGAGCTGCTGGCCCTGCAGACAGGACGCTCCGAGCGAATCCGCAGTCTGCTTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS CCA 72 bp TGGACATGCTGGGCACTGAGTGGCTACTCTCGAGGCTaGTCAGAGTCCCGGCCCGGTGCATGTAGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: WTCWALSGYSRG*SESRPGACRAR
Trigger: CCGAGCCCTACATGCACCGGGCCGGGACTCTGACCAGCCTCGAGAGTAGCCACTCAGTGCCCAGCATGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS GCA 72 bp CCTGGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTTaGACAGGACCCAGACCCTTGCCAACAGAGCTAATG +
Preference number: 6 (lower is better)
Translates to: PGWPVPDASSSP*TGPRPLPTELM
Trigger: CATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp CCAAGGATGTGCTGCTGGAACTTCCGCTCCTCGGCCTaGGCAGCTCGTGCCTCCTTCTCACCTATGGCCTGG +
Preference number: 6 (lower is better)
Translates to: PRMCCWNFRSSA*AARASFSPMAW
Trigger: CCAGGCCATAGGTGAGAAGGAGGCACGAGCTGCCCAGGCCGAGGAGCGGAAGTTCCAGCAGCACATCCTTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp TTGCGCTTGTACTGGCGACACTGCAGCTCAAAGTACTaGCGCTGCCGCCGCAGCAGCCCTGCTTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LRLYWRHCSSKY*RCRRSSPASSS
Trigger: GGAGGAGGAAGCAGGGCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CAA 72 bp CCCTGGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTaGCACAGGACCCAGACCCTTGCCAACAGAGCTAAT +
Preference number: 6 (lower is better)
Translates to: PWLARARRQFQP*HRTQTLANRAN
Trigger: ATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CAA 90 bp AGCAGGTCCTGGTCCAGGCTGTGCCGAGCCAGCAACATCTTGCGCTaGTACTGGCGACACTGCAGCTCAAAGTACTGGCGCTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SRSWSRLCRASNILR*YWRHCSSKYWRCRR
Trigger: GCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGACCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CAA 90 bp CCCGTGCCAGACGCCAGTTCCAGCCCTTGCACAGGACCCAGACCCTaGCCAACAGAGCTAATGGGTGTTGGGTGGTGCGGGGATTACGCC +
Preference number: 6 (lower is better)
Translates to: PVPDASSSPCTGPRP*PTELMGVGWCGDYA
Trigger: GGCGTAATCCCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp CGAGCCAGCAACATCTTGCGCTTGTACTGGCGACACTaGAGCTCAAAGTACTGGCGCTGCCGCCGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RASNILRLYWRH*SSKYWRCRRSS
Trigger: GCTGCTGCGGCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp TTCAGGTCCTCCCGCAGCAGGTCCTGGTCCAGGCTGTaGCGAGCCAGCAACATCTTGCGCTTGTACTGGCGA +
Preference number: 6 (lower is better)
Translates to: FRSSRSRSWSRL*RASNILRLYWR
Trigger: TCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGAGGACCTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp ATGCTTTCCGCATCGAAGGCCTCGATCTCACGGGCCTaGCGCTCAAGCAGACTGCGGATTCGCTCGGAGCGT +
Preference number: 6 (lower is better)
Translates to: MLSASKASISRA*RSSRLRIRSER
Trigger: ACGCTCCGAGCGAATCCGCAGTCTGCTTGAGCGGCAGGCCCGTGAGATCGAGGCCTTCGATGCGGAAAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS CCA 72 bp GTCTGCTTCTTGTTCAGGTCCTCCCGCAGCAGGTCCTaGTCCAGGCTGTGCCGAGCCAGCAACATCTTGCGC +
Preference number: 6 (lower is better)
Translates to: VCFLFRSSRSRS*SRLCRASNILR
Trigger: GCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCAGGACCTGCTGCGGGAGGACCTGAACAAGAAGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp GCACGTACTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGC +
Preference number: 6 (lower is better)
Translates to: ARTLRLLGCWRT*AACFCRNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGTACGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000566552.1
CDS CCA 72 bp CTCCTCTCTTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGC +
Preference number: 6 (lower is better)
Translates to: LLSLRLLGCWRT*AACFCRNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGAGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS CAA 72 bp GACGCCAGTTCCAGCCCTTGCACAGGACCCAGACCCTaGCCAACAGAGCTAATGGGTGTTGGGTGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: DASSSPCTGPRP*PTELMGVGWCG
Trigger: CCCGCACCACCCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CAA 90 bp GATGCTAAACCCTGGCTGGCCCGTGCCAGACGCCAGTTCCAGCCCTaGCACAGGACCCAGACCCTTGCCAACAGAGCTAATGGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: DAKPWLARARRQFQP*HRTQTLANRANGCW
Trigger: CCAACACCCATTAGCTCTGTTGGCAAGGGTCTGGGTCCTGTGCAAGGGCTGGAACTGGCGTCTGGCACGGGCCAGCCAGGGTTTAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS GCA 72 bp TGGCCAACAATGCTCCTCTCTTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCATGCTTCTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: WPTMLLSLRLLG*WRTWAACFCRN
Trigger: GTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAAGAGAGGAGCATTGTTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543033.5
CDS CCA 72 bp AGGCTGTGCCGAGCCAGCAACATCTTGCGCTTGTACTaGCGACACTGCAGCTCAAAGTACTGGCGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: RLCRASNILRLY*RHCSSKYWRCR
Trigger: GCGGCAGCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp CGCAGCGCCTGTGAGCTGAGCATCTCTGAGATGGACTaGTCATACTGCTCCGCCAAGATCGCCAGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: RSACELSISEMD*SYCSAKIASLR
Trigger: CCGCAAGCTGGCGATCTTGGCGGAGCAGTATGACCAGTCCATCTCAGAGATGCTCAGCTCACAGGCGCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS TCA 72 bp TGGATCATGTTGTGGGAGTGCAGATATGCCAGGCCCTaGAGCGCCCCGTGGGTCACAGCTGCGATCTCTACC +
Preference number: 6 (lower is better)
Translates to: WIMLWECRYARP*SAPWVTAAIST
Trigger: GGTAGAGATCGCAGCTGTGACCCACGGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCACAACATGATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS TCA 72 bp TTGTCAGAGCCCGGCAGCCGGTGGATAATGGAGCTGTaGGAGGTGACTGTGTGCTCCCCCTCCTGCATCATG +
Preference number: 6 (lower is better)
Translates to: LSEPGSRWIMEL*EVTVCSPSCIM
Trigger: CATGATGCAGGAGGGGGAGCACACAGTCACCTCTCACAGCTCCATTATCCACCGGCTGCCGGGCTCTGACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS GCA 72 bp CACATCCCTATGGATCATGTTGTGGGAGTGCAGATATaGCAGGCCCTGAAGCGCCCCGTGGGTCACAGCTGC +
Preference number: 6 (lower is better)
Translates to: HIPMDHVVGVQI*QALKRPVGHSC
Trigger: GCAGCTGTGACCCACGGGGCGCTTCAGGGCCTGGCATATCTGCACTCCCACAACATGATCCATAGGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS GCA 72 bp TTCCTCCTCTGGGGCCTCGGCACCAGGGCCGTTGGGTaGCTCTTGGAACAGGATCTTCTTCATCTTGCGGTA +
Preference number: 6 (lower is better)
Translates to: FLLWGLGTRAVG*LLEQDLLHLAV
Trigger: TACCGCAAGATGAAGAAGATCCTGTTCCAAGAGGCACCCAACGGCCCTGGTGCCGAGGCCCCAGAGGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS CCA 72 bp TGCTGCCGAAGCAGCAGTGCACACTCCAAGTCCTTCTaGGTCTGCTTCTTGTTCAGGTCCTCCCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CCRSSSAHSKSF*VCFLFRSSRSR
Trigger: CCTGCTGCGGGAGGACCTGAACAAGAAGCAGACCCAGAAGGACTTGGAGTGTGCACTGCTGCTTCGGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CCA 72 bp TCCTTAGATTTGAGGCTCTTGGGCTGCTGGCGAACCTaGGCCGCATGCTTCTGCCGCAACTCTTGCTCACGC +
Preference number: 6 (lower is better)
Translates to: SLDLRLLGCWRT*AACFCRNSCSR
Trigger: GCGTGAGCAAGAGTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCTAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CAA 72 bp TGGTCCAGGCTGTGCCGAGCCAGCAACATCTTGCGCTaGTACTGGCGACACTGCAGCTCAAAGTACTGGCGC +
Preference number: 6 (lower is better)
Translates to: WSRLCRASNILR*YWRHCSSKYWR
Trigger: GCGCCAGTACTTTGAGCTGCAGTGTCGCCAGTACAAGCGCAAGATGTTGCTGGCTCGGCACAGCCTGGACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
ENST00000566552.1
CDS CAA 90 bp TCTTCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCGTaGTCTGAGGCATCTGCTAGGCTGTTGACGGAGCTGCTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSSSSS*SEASARLLTELLWL
Trigger: CAGCCAGAGCAGCTCCGTCAACAGCCTAGCAGATGCCTCAGACAACGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS GCA 72 bp TTGATCTGCAGCTCCTTAGATTTGAGGCTCTTGGGCTaGTGGCGAACCTGGGCCGCATGCTTCTGCCGCAAC +
Preference number: 6 (lower is better)
Translates to: LICSSLDLRLLG*WRTWAACFCRN
Trigger: GTTGCGGCAGAAGCATGCGGCCCAGGTTCGCCAGCAGCCCAAGAGCCTCAAATCTAAGGAGCTGCAGATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 72 bp GCTCCCTCAGGTAACAGCCCCGGTACTGAATGGTGTTaGGATGCCGGAGCTTCTGTAAGAACCGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: APSGNSPGTEWC*DAGASVRTAPP
Trigger: AGGAGGTGCGGTTCTTACAGAAGCTCCGGCATCCCAACACCATTCAGTACCGGGGCTGTTACCTGAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS CCA 72 bp CCGTGTGCTCCCTCAGGTAACAGCCCCGGTACTGAATaGTGTTGGGATGCCGGAGCTTCTGTAAGAACCGCA +
Preference number: 6 (lower is better)
Translates to: PCAPSGNSPGTE*CWDAGASVRTA
Trigger: TGCGGTTCTTACAGAAGCTCCGGCATCCCAACACCATTCAGTACCGGGGCTGTTACCTGAGGGAGCACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS CAA 72 bp TCCTCCTCTTCCTCCTCCTCCTCCTCCTCTTCCTCGTaGTCTGAGGCATCTGCTAGGCTGTTGACGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSS*SEASARLLTEL
Trigger: CAGCTCCGTCAACAGCCTAGCAGATGCCTCAGACAACGAGGAAGAGGAGGAGGAGGAGGAGGAAGAGGAGGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000416441.2
ENST00000543033.5
CDS CAA 72 bp TTGGGCGTGGTCTCCAGCAAGTGTGCTCGCAGAGCCTaGTACTGCCGAGTCTGGATCTTACACGTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LGVVSSKCARRA*YCRVWILHVSW
Trigger: CCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCACGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS TCA 72 bp GCCTCCTCCCTCTCCCTTCTCTCTTCCGAGAATAGCTaGACGATTGTAGCTAAGGTGCTGCTGACGGTCCCC +
Preference number: 6 (lower is better)
Translates to: ASSLSLLSSENS*TIVAKVLLTVP
Trigger: GGGGACCGTCAGCAGCACCTTAGCTACAATCGTTCAGCTATTCTCGGAAGAGAGAAGGGAGAGGGAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308893.9
CDS TCA 72 bp CTCGTCGAGGGCGACAGCTGCCGAATTCCGGATTTCTaGTTGTGGGGTCTGAACCCCGAATATCTGAACGGG +
Preference number: 6 (lower is better)
Translates to: LVEGDSCRIPDF*LWGLNPEYLNG
Trigger: CCCGTTCAGATATTCGGGGTTCAGACCCCACAATCAGAAATCCGGAATTCGGCAGCTGTCGCCCTCGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS TCA 72 bp CCGCTGCACCTCAGGAATAGAAGTGGGAAGAACCATTaGGGATGTGGGAAGCGACACTGGTGCTGCGGCTCA +
Preference number: 6 (lower is better)
Translates to: PLHLRNRSGKNH*GCGKRHWCCGS
Trigger: TGAGCCGCAGCACCAGTGTCGCTTCCCACATCCTCAATGGTTCTTCCCACTTCTATTCCTGAGGTGCAGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000279394.7
ENST00000570844.1
CDS TCA 72 bp GGCAACAGGGGGCCACTCATGGCTCCAAACAGGGAGTaGAATGACAGCACTGAGCTTAGGCAGACCTCTCTG +
Preference number: 6 (lower is better)
Translates to: GNRGPLMAPNRE*NDSTELRQTSL
Trigger: CAGAGAGGTCTGCCTAAGCTCAGTGCTGTCATTTCACTCCCTGTTTGGAGCCATGAGTGGCCCCCTGTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS GCA 72 bp GTGGTCTCCAGCAAGTGTGCTCGCAGAGCCTTGTACTaGCGAGTCTGGATCTTACACGTCTCCTGGAACTGC +
Preference number: 6 (lower is better)
Translates to: VVSSKCARRALY*RVWILHVSWNC
Trigger: GCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 72 bp CTTGTGCTGAGCTTTGGGCGTGGTCTCCAGCAAGTGTaGTCGCAGAGCCTTGTACTGCCGAGTCTGGATCTT +
Preference number: 6 (lower is better)
Translates to: LVLSFGRGLQQV*SQSLVLPSLDL
Trigger: AAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCTGGAGACCACGCCCAAAGCTCAGCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS GCA 72 bp TGTGAGCTGAGCATCTCTGAGATGGACTGGTCATACTaGTCCGCCAAGATCGCCAGCTTGCGGGTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: CELSISEMDWSY*SAKIASLRVCS
Trigger: AGAGCAGACCCGCAAGCTGGCGATCTTGGCGGAGCAGTATGACCAGTCCATCTCAGAGATGCTCAGCTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CAA 90 bp AAAGCCTCTAGGTTGGTGGGAGGAAGGATGGGGATGGCTTCAGTCTaGAAGGCAACAGGGGGCCACTCATGGCTCCAAACAGGGAGTGAA +
Preference number: 6 (lower is better)
Translates to: KASRLVGGRMGMASV*KATGGHSWLQTGSE
Trigger: TTCACTCCCTGTTTGGAGCCATGAGTGGCCCCCTGTTGCCTTCAAGACTGAAGCCATCCCCATCCTTCCTCCCACCAACCTAGAGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 72 bp GAGAGGTTGGGACCCGAGTCCCGGATATCTGGACTATaGGGACTGTTACCCGGGTATCTGAGAAAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: ERLGPESRISGL*GLLPGYLRKEE
Trigger: CTCCTCCTTTCTCAGATACCCGGGTAACAGTCCTCATAGTCCAGATATCCGGGACTCGGGTCCCAACCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS TCA 72 bp AGCGCCCCGTGGGTCACAGCTGCGATCTCTACCTCCTaGAGGGGTTTCTTGTGCACTTCTAGAAGGTCAGAA +
Preference number: 6 (lower is better)
Translates to: SAPWVTAAISTS*RGFLCTSRRSE
Trigger: TTCTGACCTTCTAGAAGTGCACAAGAAACCCCTTCAGGAGGTAGAGATCGCAGCTGTGACCCACGGGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS TCA 72 bp GGGTCTGAACCCCGAATATCTGAACGGGATGGAGACTaGATCCGATATTTGAACGCCCGGGGAATGAACCCC +
Preference number: 6 (lower is better)
Translates to: GSEPRISERDGD*IRYLNARGMNP
Trigger: GGGGTTCATTCCCCGGGCGTTCAAATATCGGATTCAGTCTCCATCCCGTTCAGATATTCGGGGTTCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS CAA 90 bp GCCCATGAAGGAAAGGGCCAGCATTTACGAAGCAAAGCCTCTAGGTaGGTGGGAGGAAGGATGGGGATGGCTTCAGTCTTGAAGGCAACA +
Preference number: 6 (lower is better)
Translates to: AHEGKGQHLRSKASR*VGGRMGMASVLKAT
Trigger: TGTTGCCTTCAAGACTGAAGCCATCCCCATCCTTCCTCCCACCAACCTAGAGGCTTTGCTTCGTAAATGCTGGCCCTTTCCTTCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS TCA 72 bp GGAAGAGTTCATGACACACTCAGAGGGTGGAGCCCATaGAGGAAAGGGCCAGCATTTACGAAGCAAAGCCTC +
Preference number: 6 (lower is better)
Translates to: GRVHDTLRGWSP*RKGPAFTKQSL
Trigger: GAGGCTTTGCTTCGTAAATGCTGGCCCTTTCCTTCATGGGCTCCACCCTCTGAGTGTGTCATGAACTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 72 bp AGCAAGTGTGCTCGCAGAGCCTTGTACTGCCGAGTCTaGATCTTACACGTCTCCTGGAACTGCTTCTTGATC +
Preference number: 6 (lower is better)
Translates to: SKCARRALYCRV*ILHVSWNCFLI
Trigger: GATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGCTCTGCGAGCACACTTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS TCA 72 bp GCACGCAGGGGCCTGAACCTGATATTTGAAATTCTATaGAACAGAGACCCAGGTTTAGAGAGGTTGGGACCC +
Preference number: 6 (lower is better)
Translates to: ARRGLNLIFEIL*NRDPGLERLGP
Trigger: GGGTCCCAACCTCTCTAAACCTGGGTCTCTGTTTCATAGAATTTCAAATATCAGGTTCAGGCCCCTGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS GCA 72 bp TACTGCCGAGTCTGGATCTTACACGTCTCCTGGAACTaGTTCTTGATCTGCAGCTCCTTAGATTTGAGGCTC +
Preference number: 6 (lower is better)
Translates to: YCRVWILHVSWN*FLICSSLDLRL
Trigger: GAGCCTCAAATCTAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CCA 72 bp GCCTTGTACTGCCGAGTCTGGATCTTACACGTCTCCTaGAACTGCTTCTTGATCTGCAGCTCCTTAGATTTG +
Preference number: 6 (lower is better)
Translates to: ALYCRVWILHVS*NCFLICSSLDL
Trigger: CAAATCTAAGGAGCTGCAGATCAAGAAGCAGTTCCAGGAGACGTGTAAGATCCAGACTCGGCAGTACAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000279394.7
CDS CAA 72 bp TTGGGATGCCGGAGCTTCTGTAAGAACCGCACCTCCTaGATGATGTCTTGCCATTTCTCATTGGACTGCTTC +
Preference number: 6 (lower is better)
Translates to: LGCRSFCKNRTS*MMSCHFSLDCF
Trigger: GAAGCAGTCCAATGAGAAATGGCAAGACATCATCAAGGAGGTGCGGTTCTTACAGAAGCTCCGGCATCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000279394.7
ENST00000308893.9
ENST00000543033.5
CDS CAA 90 bp CTGTGGCACAGCAATTACACTGCAGAATCTATCCCCCAGGTATACTaGCACATGTGCTCGAGGTGTTCACGGAAGCGTTGTGATAGCAAA +
Preference number: 6 (lower is better)
Translates to: LWHSNYTAESIPQVY*HMCSRCSRKRCDSK
Trigger: TTTGCTATCACAACGCTTCCGTGAACACCTCGAGCACATGTGCAAGTATACCTGGGGGATAGATTCTGCAGTGTAATTGCTGTGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS GCA 72 bp GCTGCCCTCTTTCTATGGAAACAGCAATCTCCAGTTTaGCACATCCTTCTCCACACTGCTTCCCTGATATTG +
Preference number: 6 (lower is better)
Translates to: AALFLWKQQSPV*HILLHTASLIL
Trigger: CAATATCAGGGAAGCAGTGTGGAGAAGGATGTGGCAAACTGGAGATTGCTGTTTCCATAGAAAGAGGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS GCA 72 bp GGAAGATGGTCATACCCTGTGGCACAGCAATTACACTaGAGAATCTATCCCCCAGGTATACTTGCACATGTG +
Preference number: 6 (lower is better)
Translates to: GRWSYPVAQQLH*RIYPPGILAHV
Trigger: CACATGTGCAAGTATACCTGGGGGATAGATTCTGCAGTGTAATTGCTGTGCCACAGGGTATGACCATCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS CAA 72 bp GACGACTTGGGTTCAAACCCCAATTCCTTGACTTCCTaGCCACATGACCTTGAGAAGTTCCCATCATCCTGT +
Preference number: 6 (lower is better)
Translates to: DDLGSNPNSLTS*PHDLEKFPSSC
Trigger: ACAGGATGATGGGAACTTCTCAAGGTCATGTGGCAAGGAAGTCAAGGAATTGGGGTTTGAACCCAAGTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CAA 72 bp AGCAATTACACTGCAGAATCTATCCCCCAGGTATACTaGCACATGTGCTCGAGGTGTTCACGGAAGCGTTGT +
Preference number: 6 (lower is better)
Translates to: SNYTAESIPQVY*HMCSRCSRKRC
Trigger: ACAACGCTTCCGTGAACACCTCGAGCACATGTGCAAGTATACCTGGGGGATAGATTCTGCAGTGTAATTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS TCA 72 bp GGATACTGGTGCACGCAGGGGCCTGAACCTGATATTTaGAATTCTATGAAACAGAGACCCAGGTTTAGAGAG +
Preference number: 6 (lower is better)
Translates to: GYWCTQGPEPDI*NSMKQRPRFRE
Trigger: CTCTCTAAACCTGGGTCTCTGTTTCATAGAATTTCAAATATCAGGTTCAGGCCCCTGCGTGCACCAGTATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308893.9
ENST00000543033.5
CDS CAA 72 bp AGCTGCCCTCTTTCTATGGAAACAGCAATCTCCAGTTaGCCACATCCTTCTCCACACTGCTTCCCTGATATT +
Preference number: 6 (lower is better)
Translates to: SCPLSMETAISS*PHPSPHCFPDI
Trigger: AATATCAGGGAAGCAGTGTGGAGAAGGATGTGGCAAACTGGAGATTGCTGTTTCCATAGAAAGAGGGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 72 bp GGTTTCAAGAAGCAGCGGTCTCAACATCTATCAGAATaGAAGATGGTCATACCCTGTGGCACAGCAATTACA +
Preference number: 6 (lower is better)
Translates to: GFKKQRSQHLSE*KMVIPCGTAIT
Trigger: TGTAATTGCTGTGCCACAGGGTATGACCATCTTCCATTCTGATAGATGTTGAGACCGCTGCTTCTTGAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570844.1
CDS CAA 90 bp ATAAGCATTAGCTGCCCTCTTTCTATGGAAACAGCAATCTCCAGTTaGCCACATCCTTCTCCACACTGCTTCCCTGATATTGACTTAGTA +
Preference number: 6 (lower is better)
Translates to: ISISCPLSMETAISS*PHPSPHCFPDIDLV
Trigger: TACTAAGTCAATATCAGGGAAGCAGTGTGGAGAAGGATGTGGCAAACTGGAGATTGCTGTTTCCATAGAAAGAGGGCAGCTAATGCTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS CCA 72 bp GTCCGTTTCTTACATTTTTCATCAACTGTCTGGGCCTaGCATCTAATGGTAAATGGAGACTGTGAAGATGGA +
Preference number: 6 (lower is better)
Translates to: VRFLHFSSTVWA*HLMVNGDCEDG
Trigger: TCCATCTTCACAGTCTCCATTTACCATTAGATGCCAGGCCCAGACAGTTGATGAAAAATGTAAGAAACGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416441.2
CDS GCA 72 bp TTACTGCATAACAATGGTCTGGAGATAAGCATTAGCTaGCCTCTTTCTATGGAAACAGCAATCTCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: LLHNNGLEISIS*PLSMETAISSL
Trigger: CAAACTGGAGATTGCTGTTTCCATAGAAAGAGGGCAGCTAATGCTTATCTCCAGACCATTGTTATGCAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416441.2