RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAOK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000160551

Ensembl transcript IDs: ENST00000261716.8, ENST00000536202.1, ENST00000577583.1, ENST00000578653.1, ENST00000583121.5, ENST00000587277.1

Found 482 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATAAGCAACAAAACGTCAGGACACGTAAGCTTCATCTCCTCACTCTaGTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCA +
Preference number: 1 (lower is better)
Translates to: ISNKTSGHVSFISSL*CGTYPPYELSGPLS
Trigger: TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGACGTTTTGTTGCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR GCA 90 bp ATATTCCCTTTAGCCACCACAGCTGGTCCTGGGCTACTACAGGTGTaGATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTACAG +
Preference number: 1 (lower is better)
Translates to: IFPLATTAGPGLLQV*IHRSMVYSEMIRLQ
Trigger: CTGTAACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGCCCAGGACCAGCTGTGGTGGCTAAAGGGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 90 bp GGTTTCTTTGATATTGTGAAATGCAAAGAAGGACAGCAGCACATTTaGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACA +
Preference number: 1 (lower is better)
Translates to: GFFDIVKCKEGQQHI*NGNQKRAVWQYTRT
Trigger: TGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTGCTGCTGTCCTTCTTTGCATTTCACAATATCAAAGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp CTGATATTACAAGTACATGTCATGTCATGTTTACCTAAAAACCGGTaGCCTGGAGCATGGGCTGAAAGAACAACACATAAGAGTGCTTCT +
Preference number: 1 (lower is better)
Translates to: LILQVHVMSCLPKNR*PGAWAERTTHKSAS
Trigger: AGAAGCACTCTTATGTGTTGTTCTTTCAGCCCATGCTCCAGGTCACCGGTTTTTAGGTAAACATGACATGACATGTACTTGTAATATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp CATGGCAACTCGACTGACATACCTGGGAAAGACTTAAAATTTGGTTaGGAAAACCAGGACTTCAACAGTGATAGATTGATTACTGTTTGG +
Preference number: 1 (lower is better)
Translates to: HGNSTDIPGKDLKFG*ENQDFNSDRLITVW
Trigger: CCAAACAGTAATCAATCTATCACTGTTGAAGTCCTGGTTTTCTCAACCAAATTTTAAGTCTTTCCCAGGTATGTCAGTCGAGTTGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp CATAAAATGCTGTTAGGAAGAAGGGTGGTGGTTTCTTTGATATTGTaGAATGCAAAGAAGGACAGCAGCACATTTGGAATGGGAACCAAA +
Preference number: 1 (lower is better)
Translates to: HKMLLGRRVVVSLIL*NAKKDSSTFGMGTK
Trigger: TTTGGTTCCCATTCCAAATGTGCTGCTGTCCTTCTTTGCATTTCACAATATCAAAGAAACCACCACCCTTCTTCCTAACAGCATTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR GCA 90 bp CTTACTTTCCATGGTTCATTTCTCTCTGCATTACTTATCTCTTATTaGATCACAACACAAACTCACAGAAACACTAACTGGCTCCTTCCC +
Preference number: 1 (lower is better)
Translates to: LTFHGSFLSALLISY*ITTQTHRNTNWLLP
Trigger: GGGAAGGAGCCAGTTAGTGTTTCTGTGAGTTTGTGTTGTGATGCAATAAGAGATAAGTAATGCAGAGAGAAATGAACCATGGAAAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 90 bp CTATGTAGTGTGACGAGAATTTCAATAGATGGCAATTTGCAAATATaGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTC +
Preference number: 1 (lower is better)
Translates to: LCSVTRISIDGNLQI*HQTPPAFDLYWLYV
Trigger: GACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCCATCTATTGAAATTCTCGTCACACTACATAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CCA 90 bp AAGAAATGCATTTCCCTTGTCTATGTTCATCAGCCTTTAATACTTTaGCTACAAGGCATATCAGAGAAAGGGAGGTTAAATTGGGTAATG +
Preference number: 1 (lower is better)
Translates to: KKCISLVYVHQPLIL*LQGISEKGRLNWVM
Trigger: CATTACCCAATTTAACCTCCCTTTCTCTGATATGCCTTGTAGCCAAAGTATTAAAGGCTGATGAACATAGACAAGGGAAATGCATTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp AAACTGGTGGCCAAATACATTAGATACAAAACCCTACTGGAGATCTaGATGGACTCAGTAACTCTCAATTTGACTAATTTAAGTCCACAA +
Preference number: 1 (lower is better)
Translates to: KLVAKYIRYKTLLEI*MDSVTLNLTNLSPQ
Trigger: TTGTGGACTTAAATTAGTCAAATTGAGAGTTACTGAGTCCATTCAGATCTCCAGTAGGGTTTTGTATCTAATGTATTTGGCCACCAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp AAAAATCATGACTATGCTAAAATGTTCCATTTACCAACAAATCCTTaGCCTAGAGTACTAAGCATATTACACCAGTGTGTGTGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: KNHDYAKMFHLPTNP*PRVLSILHQCVWLQ
Trigger: TTGAAGCCACACACACTGGTGTAATATGCTTAGTACTCTAGGTCAAGGATTTGTTGGTAAATGGAACATTTTAGCATAGTCATGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 90 bp GATCTAAAGACTACCGTTAAGCTAAATGGAGTCTCTTCCCTTGTATaGGTGAAATTTTGGAAATCTGAATACAAACAAGGAGGAAAACAT +
Preference number: 1 (lower is better)
Translates to: DLKTTVKLNGVSSLV*VKFWKSEYKQGGKH
Trigger: ATGTTTTCCTCCTTGTTTGTATTCAGATTTCCAAAATTTCACTCATACAAGGGAAGAGACTCCATTTAGCTTAACGGTAGTCTTTAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCACTGTAGTACCCAAGTaGGGAGGCTGCTGTGATGAT +
Preference number: 2 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPTVVPK*GGCCDD
Trigger: ATCATCACAGCAGCCTCCTCACTTGGGTACTACAGT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR CCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGCTGCCTGCTGTGAGTaGCTCATAAGAATTTGGGAT +
Preference number: 2 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPAACCE*LIRIWD
Trigger: ATCCCAAATTCTTATGAGCCACTCACAGCAGGCAGC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR GCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCATCAACATATGCTGCCTaGTGTGAGTGGCTCATAAGA +
Preference number: 2 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSSTYAA*CEWLIR
Trigger: TCTTATGAGCCACTCACAGCAGGCAGCATATGTTGA...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR TCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATACCCAAAAGTGATAACTaGAGCCATTTTGCTACGTTC +
Preference number: 2 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIPKSDN*SHFATF
Trigger: GAACGTAGCAAAATGGCTTCAGTTATCACTTTTGGG...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CAA 90 bp CCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCCATaGAAGGCTCATAGGTTTGTTAATGCAATCCTCACACAACTTGTG +
Preference number: 2 (lower is better)
Translates to: PYELSGPLSPFWSSP*KAHRFVNAILTQLV
Trigger: CACAAGTTGTGTGAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR TCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGGGCAAATCTCTACTTaGATAGTAGTGGCTCAGAAG +
Preference number: 2 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAGQIST*IVVAQK
Trigger: CTTCTGAGCCACTACTATTCAAGTAGAGATTTGCCC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCCAAAGGAAAAAGTGTTaGAAGGGTTCCAATAGCCCC +
Preference number: 2 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAQRKKC*KGSNSP
Trigger: GGGGCTATTGGAACCCTTCCAACACTTTTTCCTTTG...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCACTGTAGTACCCAAGTaGGGAGGCTGCTGTGATGAT +
Preference number: 2 (lower is better)
Translates to: HRFVNAILTQLVISLSTPTVVPK*GGCCDD
Trigger: ATCATCACAGCAGCCTCCTCACTTGGGTACTACAGT...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR CCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTACACCAGTGTGTGTaGCTTCAAATACAAGACTCT +
Preference number: 2 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTALHQCV*LQIQDS
Trigger: AGAGTCTTGTATTTGAAGCCACACACACTGGTGTAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTACCCTACTGGAGATCTaGATGGACTCAGTAACTCTC +
Preference number: 2 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVTLLEI*MDSVTL
Trigger: GAGAGTTACTGAGTCCATTCAGATCTCCAGTAGGGT...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCACAAGCTTTACTCTATaGTGGTTCCTACTATGTATG +
Preference number: 2 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTATSFTL*WFLLCM
Trigger: CATACATAGTAGGAACCATCATAGAGTAAAGCTTGT...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGATATGCTGCCTGCTGTaGGTGGCTCATAAGAATTTG +
Preference number: 2 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQICCLL*VAHKNL
Trigger: CAAATTCTTATGAGCCACTCACAGCAGGCAGCATAT...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCACACTGGTGAGGCAATaGAGGTGTGTACCAGTAATA +
Preference number: 2 (lower is better)
Translates to: HRFVNAILTQLVISLSTPTLVRQ*RCVPVI
Trigger: TATTACTGGTACACACCTGCATTGCCTCACCAGTGT...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCCGGATTTCTAAGAAATaGATTTCCCTTGTCTATGTT +
Preference number: 2 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTARISKK*ISLVYV
Trigger: AACATAGACAAGGGAAATGCATTTCTTAGAAATCCG...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGAATTACCCGTACTTTaGGGGGAATTCTGGGTATCA +
Preference number: 2 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVELPVL*GEFWVS
Trigger: TGATACCCAGAATTCCCCCCAAAGTACGGGTAATTC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 90 bp CCCTCACCCAATACCAAATCCTTCTCTCCCAGTGGCCATTTCCTGTaGATTTTACAGTTCAGGAGAATCTTAGATGCTTTAGCAGTAATT +
Preference number: 2 (lower is better)
Translates to: PSPNTKSFSPSGHFL*ILQFRRILDALAVI
Trigger: AATTACTGCTAAAGCATCTAAGATTCTCCTGAACTGTAAAATCAACAGGAAATGGCCACTGGGAGAGAAGGATTTGGTATTGGGTGAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCCCCAAAAGTGATAACTaGAGCCATTTTGCTACGTTC +
Preference number: 2 (lower is better)
Translates to: HRFVNAILTQLVISLSTPPKSDN*SHFATF
Trigger: GAACGTAGCAAAATGGCTTCAGTTATCACTTTTGGG...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR TCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAGACATATAGTGAGTaGACACCAACACTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQKTYSE*TPTLGR
Trigger: CCTTCCCAGTGTTGGTGTTCACTCACTATATGTCTT...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGCTGCCTGCTGTGAGTaGCTCATAAGAATTTGGGAT +
Preference number: 2 (lower is better)
Translates to: SESACSFSRISQNPSNFSAACCE*LIRIWD
Trigger: ATCCCAAATTCTTATGAGCCACTCACAGCAGGCAGC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTTTTACAGCCAGCCTCTaGATACCAGATATAGCATTT +
Preference number: 2 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVFTASL*IPDIAF
Trigger: AAATGCTATATCTGGTATCCAGAGGCTGGCTGTAAA...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATGGTTCCTACTATGTATaGGATTCCTCAGAAGCTAGA +
Preference number: 2 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNGSYYV*DSSEAR
Trigger: TCTAGCTTCTGAGGAATCTCATACATAGTAGGAACC...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTTTACCAACAAATCCTTaGCCTAGAGTACTAAGCATA +
Preference number: 2 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVLPTNP*PRVLSI
Trigger: TATGCTTAGTACTCTAGGTCAAGGATTTGTTGGTAA...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTAGTGAATGGCACAAATaGAGAAATGCAAAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSEWHK*RNAKEV
Trigger: CACCTCCTTTGCATTTCTCCATTTGTGCCATTCACT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATATCCTTCTCTCCCAGTaGCCATTTCCTGTTGATTTT +
Preference number: 2 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNILLSQ*PFPVDF
Trigger: AAAATCAACAGGAAATGGCCACTGGGAGAGAAGGAT...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATGTAGTGGCTCAGAAGTaGTGGAAGGTGCACAAAGAA +
Preference number: 2 (lower is better)
Translates to: ENISQHDFKGNYRNSAENVVAQK*WKVHKE
Trigger: TTCTTTGTGCACCTTCCACCACTTCTGAGCCACTAC...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTGTGTGATGTTAACTTaGTGCCAAATGGTCACTAAG +
Preference number: 2 (lower is better)
Translates to: FHDKLPTDVQISISSGHPCVMLT*CQMVTK
Trigger: CTTAGTGACCATTTGGCATCAAGTTAACATCACACA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATAAAAGCCCCTTTCACTaGTATTACAAGTACATGTCA +
Preference number: 2 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNKSPFH*YYKYMS
Trigger: TGACATGTACTTGTAATATCAGTGAAAGGGGCTTTT...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATGAGCAGCCAGATCTATaGATAATTTTTAAGGGTATC +
Preference number: 2 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNEQPDL*IIFKGI
Trigger: GATACCCTTAAAAATTATTCATAGATCTGGCTGCTC...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 90 bp CAATTATGTCTATGTAGTGTGACGAGAATTTCAATAGATGGCAATTaGCAAATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGG +
Preference number: 2 (lower is better)
Translates to: QLCLCSVTRISIDGN*QIWHQTPPAFDLYW
Trigger: CCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCCATCTATTGAAATTCTCGTCACACTACATAGACATAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CAA 90 bp TTTACAGATAATTACATGATTTTTCACTCACAAGTGCTGAACACTTaGAGTGAAAGAAAACTGTGCAGGTTGAATTACCCGTACTTTGGG +
Preference number: 2 (lower is better)
Translates to: FTDNYMIFHSQVLNT*SERKLCRLNYPYFG
Trigger: CCCAAAGTACGGGTAATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAAAATCATGTAATTATCTGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTAGTAAAAGTACTGTTTaGGGTCTTGGGCATTATAGA +
Preference number: 2 (lower is better)
Translates to: SESACSFSRISQNPSNFSSKSTV*GLGHYR
Trigger: TCTATAATGCCCAAGACCCCAAACAGTACTTTTACT...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR TCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATGTGTTTCAAGTACAATaGAGTCATTTTTCACAGGTG +
Preference number: 2 (lower is better)
Translates to: ENISQHDFKGNYRNSAENVFQVQ*SHFSQV
Trigger: CACCTGTGAAAAATGACTTCATTGTACTTGAAACAC...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR GCA 72 bp ACGTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTaGGGGACATACCCACCATATGAACTTTCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: TSGHVSFISSLC*GTYPPYELSGP
Trigger: GGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR CAA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGTAGGCAGTTTCTTTaGGCAGACAGCTCCAGCGGA +
Preference number: 3 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTICRQFL*ADSSSG
Trigger: TCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACA...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR TCA 72 bp ATGCACATCTGTACAGTCACCTTTACCAGCTGGTGCTaGCAGAGAGGGAGAGGCTTCTTCCCCAATGCAACC +
Preference number: 3 (lower is better)
Translates to: MHICTVTFTSWC*QRGRGFFPNAT
Trigger: GGTTGCATTGGGGAAGAAGCCTCTCCCTCTCTGTCAGCACCAGCTGGTAAAGGTGACTGTACAGATGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCACAGCTCCAGCGGAATaGCCACTCTCAATTATTAAG +
Preference number: 3 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPTAPAE*PLSIIK
Trigger: CTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTGT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR GCA 72 bp AAAACGTCAGGACACGTAAGCTTCATCTCCTCACTCTaGTGCGGGACATACCCACCATATGAACTTTCAGGG +
Preference number: 3 (lower is better)
Translates to: KTSGHVSFISSL*CGTYPPYELSG
Trigger: CCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGACGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGTGGCTCATAAGAATTaGGGATATGGGATAAAAAGG +
Preference number: 3 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSVAHKN*GYGIKR
Trigger: CCTTTTTATCCCATATCCCAAATTCTTATGAGCCAC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR-3UTR CAA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGTACTGTTTGGGGTCTaGGGCATTATAGAGCTTAGC +
Preference number: 3 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAVLFGV*GIIELS
Trigger: GCTAAGCTCTATAATGCCCAAGACCCCAAACAGTAC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR GCA 72 bp TTAGCCACCACAGCTGGTCCTGGGCTACTACAGGTGTaGATTCATCGCTCAATGGTCTACTCAGAAATGATA +
Preference number: 3 (lower is better)
Translates to: LATTAGPGLLQV*IHRSMVYSEMI
Trigger: TATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGCCCAGGACCAGCTGTGGTGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp CAGCACATTTGGAATGGGAACCAAAAGAGAGCTGTCTaGCAATACACCAGGACAGCCAACATCTTGGTAAGT +
Preference number: 3 (lower is better)
Translates to: QHIWNGNQKRAV*QYTRTANILVS
Trigger: ACTTACCAAGATGTTGGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGTGGCTCATAAGAATTaGGGATATGGGATAAAAAGG +
Preference number: 3 (lower is better)
Translates to: HVSFISSLCCGTYPPYELVAHKN*GYGIKR
Trigger: CCTTTTTATCCCATATCCCAAATTCTTATGAGCCAC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR TCA 72 bp AGTTTCCTTAAAATGAATCCCAGAAACTCCTACAGGTaGGGATTCATGGCAACTCGACTGACATACCTGGGA +
Preference number: 3 (lower is better)
Translates to: SFLKMNPRNSYR*GFMATRLTYLG
Trigger: TCCCAGGTATGTCAGTCGAGTTGCCATGAATCCTCACCTGTAGGAGTTTCTGGGATTCATTTTAAGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp CTGGTCTTCATGCTTTCAAGTGGCCCTAATATACCTTaGATACTAAGCCAAGCCATGCAAAAGCAAAGAGCA +
Preference number: 3 (lower is better)
Translates to: LVFMLSSGPNIP*ILSQAMQKQRA
Trigger: TGCTCTTTGCTTTTGCATGGCTTGGCTTAGTATCCAAGGTATATTAGGGCCACTTGAAAGCATGAAGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTACAGCTCCAGCGGAATaGCCACTCTCAATTATTAAG +
Preference number: 3 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVTAPAE*PLSIIK
Trigger: CTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTGT...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTGTAGGCAGTTTCTTTaGGCAGACAGCTCCAGCGGA +
Preference number: 3 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVCRQFL*ADSSSG
Trigger: TCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CCA 72 bp TTTACGGTAACAATGTTCATGCCCAGGCAATGTATTTaGGGCTCAGAAAAAGCAAAATGTGCCACTGAGAGA +
Preference number: 3 (lower is better)
Translates to: FTVTMFMPRQCI*GSEKAKCATER
Trigger: TCTCTCAGTGGCACATTTTGCTTTTTCTGAGCCCCAAATACATTGCCTGGGCATGAACATTGTTACCGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp GTTTTCCCACCTTGTGTCTCTAGCTTGGATTATTCTTaGACACATGTAATTAATTGGAGGGGCACTCCTAAG +
Preference number: 3 (lower is better)
Translates to: VFPPCVSSLDYS*THVINWRGTPK
Trigger: CTTAGGAGTGCCCCTCCAATTAATTACATGTGTCCAAGAATAATCCAAGCTAGAGACACAAGGTGGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTCAAGTGCTGAACACTTaGAGTGAAAGAAAACTGTGC +
Preference number: 3 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVQVLNT*SERKLC
Trigger: GCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTG...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 72 bp CCCACACATCCTTCTCTTTTCTTGGATTTTACCCTATaGAACCACCTGCAGCTCCTAATAGGCTCATATATA +
Preference number: 3 (lower is better)
Translates to: PTHPSLFLDFTL*NHLQLLIGSYI
Trigger: TATATATGAGCCTATTAGGAGCTGCAGGTGGTTTCATAGGGTAAAATCCAAGAAAAGAGAAGGATGTGTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR GCA 72 bp ATACGAGACAAATGGTCACATAGACCACCCAGAATCTaGAAATGTTGGGCAGTTACATCCTTTAAAGTCACA +
Preference number: 3 (lower is better)
Translates to: IRDKWSHRPPRI*KCWAVTSFKVT
Trigger: TGTGACTTTAAAGGATGTAACTGCCCAACATTTGCAGATTCTGGGTGGTCTATGTGACCATTTGTCTCGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTTCAGCCTTTAATACTTaGGCTACAAGGCATATCAGA +
Preference number: 3 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVSAFNT*ATRHIR
Trigger: TCTGATATGCCTTGTAGCCAAAGTATTAAAGGCTGA...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTTTCTGGTCTTCCCCATaGAAGGCTCATAGGTTTGTT +
Preference number: 3 (lower is better)
Translates to: SESACSFSRISQNPSNFSFWSSP*KAHRFV
Trigger: AACAAACCTATGAGCCTTCAATGGGGAAGACCAGAA...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTACTGACTTTTTAGCATaGGGTTCATCCTTCATTGTA +
Preference number: 3 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVTDFLA*GSSFIV
Trigger: TACAATGAAGGATGAACCCAATGCTAAAAAGTCAGT...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGAAAGGGAGGTTAAATaGGGTAATGACAAAAGAACA +
Preference number: 3 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVEREVK*GNDKRT
Trigger: TGTTCTTTTGTCATTACCCAATTTAACCTCCCTTTC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 72 bp TGTGGAAGTGGTGTTTCCTATTGTGTGATGTTAACTTaGTGCCAAATGGTCACTAAGTCTCAACGAACTAGA +
Preference number: 3 (lower is better)
Translates to: CGSGVSYCVMLT*CQMVTKSQRTR
Trigger: TCTAGTTCGTTGAGACTTAGTGACCATTTGGCATCAAGTTAACATCACACAATAGGAAACACCACTTCCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 72 bp AACCCTTCCAATTTTTCTGCTACAAGCTTTACTCTATaGTGGTTCCTACTATGTATGAGATTCCTCAGAAGC +
Preference number: 3 (lower is better)
Translates to: NPSNFSATSFTL*WFLLCMRFLRS
Trigger: GCTTCTGAGGAATCTCATACATAGTAGGAACCATCATAGAGTAAAGCTTGTAGCAGAAAAATTGGAAGGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 72 bp CACTGGGAAGGAGGTAGTGTTAATTTGATCAAATATTaGTATTTCCCCACTGATTCAGAAAGTGCTTGCTCT +
Preference number: 3 (lower is better)
Translates to: HWEGGSVNLIKY*YFPTDSESACS
Trigger: AGAGCAAGCACTTTCTGAATCAGTGGGGAAATATCAATATTTGATCAAATTAACACTACCTCCTTCCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR TCA 72 bp CATGATTTTTCACTCACAAGTGCTGAACACTTTGAGTaGAAGAAAACTGTGCAGGTTGAATTACCCGTACTT +
Preference number: 3 (lower is better)
Translates to: HDFSLTSAEHFE*KKTVQVELPVL
Trigger: AAGTACGGGTAATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAAAATCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp GTGACGAGAATTTCAATAGATGGCAATTTGCAAATATaGCATCAAACACCTCCGGCATTTGATTTGTATTGG +
Preference number: 3 (lower is better)
Translates to: VTRISIDGNLQI*HQTPPAFDLYW
Trigger: CCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCCATCTATTGAAATTCTCGTCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR TCA 72 bp TCGACTGACATACCTGGGAAAGACTTAAAATTTGGTTaGGAAAACCAGGACTTCAACAGTGATAGATTGATT +
Preference number: 3 (lower is better)
Translates to: STDIPGKDLKFG*ENQDFNSDRLI
Trigger: AATCAATCTATCACTGTTGAAGTCCTGGTTTTCTCAACCAAATTTTAAGTCTTTCCCAGGTATGTCAGTCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp ATTTCCCTTGTCTATGTTCATCAGCCTTTAATACTTTaGCTACAAGGCATATCAGAGAAAGGGAGGTTAAAT +
Preference number: 3 (lower is better)
Translates to: ISLVYVHQPLIL*LQGISEKGRLN
Trigger: ATTTAACCTCCCTTTCTCTGATATGCCTTGTAGCCAAAGTATTAAAGGCTGATGAACATAGACAAGGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR-3UTR CAA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATTGCTACGTTCTATTTTaGCAGTGTTCAGAAAAATCC +
Preference number: 3 (lower is better)
Translates to: ENISQHDFKGNYRNSAENCYVLF*QCSEKS
Trigger: GGATTTTTCTGAACACTGCAAAAATAGAACGTAGCA...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CCA 72 bp AATATACTGTACAATAAGCCTTACCAGTTAGTGCTGTaGACCATTTATACCAAAAGGAAAATGCACATCTGT +
Preference number: 3 (lower is better)
Translates to: NILYNKPYQLVL*TIYTKRKMHIC
Trigger: ACAGATGTGCATTTTCCTTTTGGTATAAATGGTCCACAGCACTAACTGGTAAGGCTTATTGTACAGTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAGCAGGCGCAGCCCCCTaGAGCGCTCCGGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIAGAAP*SAPVAA
Trigger: AGCGGCTACCGGAGCGCTGCAGGGGGCTGCGCCTGC...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATTTCGCCGACAGGTCTaGGGCGGAGCAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIFRRQV*GGAGRR
Trigger: GCGCCTGCCTGCTCCGCCCCAGACCTGTCGGCGAAA...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTCGTGCTTCTGCTCATaGCCTGCTCCGTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSCFCS*PAPSVP
Trigger: GGGGACGGACGGAGCAGGGCATGAGCAGAAGCACGA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCAGTAGGGTTGTGTaGCCAACCAGAAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSPSRVV*PTRSSR
Trigger: CCGGGAGCTTCTGGTTGGTCACACAACCCTACTGGG...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCCTTCTGCTCATGCCCTaGTCCGTCCGTCCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPLLLMP*SVRPPE
Trigger: TTCTGGGGGACGGACGGAGCAGGGCATGAGCAGAAG...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCATGGCCCCAAGCTTGTaGTGGGCCACCCATGGGATG +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPMAPSL*WATHGM
Trigger: CATCCCATGGGTGGCCCACCACAAGCTTGGGGCCAT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATACCCAGTAGGGTTGTGTaGCCAACCAGAAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIPSRVV*PTRSSR
Trigger: CCGGGAGCTTCTGGTTGGTCACACAACCCTACTGGG...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAATGGCCCCAAGCTTGTaGTGGGCCACCCATGGGATG +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIMAPSL*WATHGM
Trigger: CATCCCATGGGTGGCCCACCACAAGCTTGGGGCCAT...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGGCGCCCTCAGCGCTTaGGCTCAGTTAAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATGALSA*AQLRWR
Trigger: GCGCCATCTTAACTGAGCCCAAGCGCTGAGGGCGCC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATACCACCTTGCATTGGATaGCCCCAAGCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIPPCIG*PQACGG
Trigger: CCCACCACAAGCTTGGGGCCATCCAATGCAAGGTGG...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCATGTAAACATGGCCACTaGGGGAGAGAGGCTCCCTAC +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSCKHGH*GREAPY
Trigger: GTAGGGAGCCTCTCTCCCCCAGTGGCCATGTTTACA...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAAAGGAATTGGCAGGTaGTGCCATGGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPKGIGR*CHGSRA
Trigger: GGCTCTGCTTCCATGGCATCACCTGCCAATTCCTTT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAAAAGGAATTGGCAGGTaGTGCCATGGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSKGIGR*CHGSRA
Trigger: GGCTCTGCTTCCATGGCATCACCTGCCAATTCCTTT...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGGGTCTGTTCCTCCTTaGGCCGTTTCAGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSGSVPP*AVSEQL
Trigger: AAGCTGTTCTGAAACGGCTCAAGGAGGAACAGACCC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAAGTCATTGGCTCAGTaGCTCCTGGTTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPKSLAQ*LLVHCG
Trigger: GCCACAGTGAACCAGGAGTCACTGAGCCAATGACTT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGGATGGCGCGGGGAAGTaGCGGGAGCCGTCTCCGTCG +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQDGAGK*REPSPS
Trigger: CGACGGAGACGGCTCCCGGCACTTCCCCGCGCCATC...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGGCAGGCGCAGCCCCCTaGAGCGCTCCGGTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLAGAAP*SAPVAA
Trigger: AGCGGCTACCGGAGCGCTGCAGGGGGCTGCGCCTGC...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGGCTGGGGTCCACCTTaGATTGGATGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELGWGPP*IGWPQA
Trigger: AGCTTGGGGCCATCCAATGCAAGGTGGACCCCAGCC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCATGGCAGGTGATGCCATaGAAGCAGAGCCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSWQVMP*KQSQSQ
Trigger: CTGACTTTGGCTCTGCTTCCATGGCATCACCTGCCA...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTACCCCAGTGAGGTCCTaGACCCCCAGTAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATTPVRS*TPSRVV
Trigger: CACAACCCTACTGGGGGTCCAGGACCTCACTGGGGT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CAA 72 bp GACAGAGAGGGAGAGGCTTCTTCCCCAATGCAACCCTaGATAAGCCTCCACTGTGAGCGTCTGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DREGEASSPMQP*ISLHCERLFGP
Trigger: TGGACCAAACAGACGCTCACAGTGGAGGCTTATCAAGGGTTGCATTGGGGAAGAAGCCTCTCCCTCTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTCAATCTCTCTGGCTTaGCGTTCCAACAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSISLA*RSNRLR
Trigger: ACGAAGCCTGTTGGAACGTCAAGCCAGAGAGATTGA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCCCCTTGCATTGGCCCTaGAGGGTGACCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILPLHWP*RVTPWL
Trigger: CAGCCATGGGGTCACCCTTCAGGGCCAATGCAAGGG...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAGCTCCAGTTCCTGCTaGAGCTGCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSSSSC*SCIFKT
Trigger: GGTTTTGAAGATGCAGCTGCAGCAGGAACTGGAGCT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGAGCCTGGGGGCTATTaGGGACTCCCATACTGCTAC +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATEPGGY*GLPYCY
Trigger: GTAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGGGTCCACCTTGCATTaGATGGCCCCAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATGSTLH*MAPSLW
Trigger: CCACAAGCTTGGGGCCATCCAATGCAAGGTGGACCC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGTCATCAGTTGCTTTTaGTGTTGTCGCCTCATTCGC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPVISCF*CCRLIR
Trigger: GCGAATGAGGCGACAACATCAAAAGCAACTGATGAC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGCACTCTGCTTCCTGTaGTTCATCCAAACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAALCFL*FIQTQG
Trigger: GCCCTGCGTTTGGATGAAGCACAGGAAGCAGAGTGC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAAACAGCTCCAGTTCCTaGTGCAGCTGCATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSNSSSS*CSCIFK
Trigger: TTTGAAGATGCAGCTGCAGCAGGAACTGGAGCTGTT...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAGGGCTACTACAGGTGTaGATTCATCGCTCAATGGTC +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIGLLQV*IHRSMV
Trigger: GACCATTGAGCGATGAATGCACACCTGTAGTAGCCC...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTTTCGCCGACAGGTCTaGGGCGGAGCAGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLFRRQV*GGAGRR
Trigger: GCGCCTGCCTGCTCCGCCCCAGACCTGTCGGCGAAA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCATTTGTGCTCACTCTTTaGTGTAGTCTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSFVLTL*CSLQQV
Trigger: CACCTGCTGGAGACTACACCAAAGAGTGAGCACAAA...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTCACCACAGCTGGTCCTaGGCTACTACAGGTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELHHSWS*ATTGVH
Trigger: ATGCACACCTGTAGTAGCCCAGGACCAGCTGTGGTG...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGGGTCTGTTCCTCCTTaGGCCGTTTCAGAACAGCTT +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAGSVPP*AVSEQL
Trigger: AAGCTGTTCTGAAACGGCTCAAGGAGGAACAGACCC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCCCCTTGCATTGGCCCTaGAGGGTGACCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPPLHWP*RVTPWL
Trigger: CAGCCATGGGGTCACCCTTCAGGGCCAATGCAAGGG...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
51% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCCCCATTGGATATTTGTaGAGTGACACTCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPPIGYL*SDTRAS
Trigger: AGAAGCACGAGTGTCACTTCACAAATATCCAATGGG...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTCTTGCATAGATTCATaGTGTCGGAGTAGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSCIDS*CRSSMA
Trigger: TGCCATGCTACTCCGACAGCATGAATCTATGCAAGA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTCAACATATGCTGCCTaGTGTGAGTGGCTCATAAGA +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSTYAA*CEWLIR
Trigger: TCTTATGAGCCACTCACAGCAGGCAGCATATGTTGA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTCATCTCCTCACTCTaGTGCGGGACATACCCACCA +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAFISSL*CGTYPP
Trigger: TGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGCATCTTCAAAACCTaGCACTCTGCTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTICIFKT*HSASCA
Trigger: AGCACAGGAAGCAGAGTGCCAGGTTTTGAAGATGCA...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAAAGCTTCAATCTCTCTaGCTTGACGTTCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIKLQSL*LDVPTG
Trigger: GCCTGTTGGAACGTCAAGCCAGAGAGATTGAAGCTT...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGCCCCAAGCTTGTGGTaGGCCACCCATGGGATGACC +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVAPSLW*ATHGMT
Trigger: GGTCATCCCATGGGTGGCCCACCACAAGCTTGGGGC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGGTCCGCCTCAGAGCCTaGGGGCTATTGCGGACTCCC +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLVRLRA*GLLRTP
Trigger: GGGAGTCCGCAATAGCCCCCAGGCTCTGAGGCGGAC...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGGCAATTTGCAAATATaGCATCAAACACCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPGNLQI*HQTPPA
Trigger: TGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTGCCTCGTAACCAGTaGTGCTGTCCGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTALPRNQ*CCPYSS
Trigger: GCTACTATACGGACAGCATCACTGGTTACGAGGCAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGTAGTCTCCAGCAGGTaGTTTCTTAATGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSVVSSR*FLNALY
Trigger: GTACAAAGCATTAAGAAATCACCTGCTGGAGACTAC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATACCTCAGCTTGCATCTTaGTTTTGCTCTGATACGCAT +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIPQLAS*FCSDTH
Trigger: ATGCGTATCAGAGCAAAATCAAGATGCAAGCTGAGG...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAATTGGCCCTGAAGGGTaGCCCCATGGCTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLIGPEG*PHGWGP
Trigger: TGGACCCCAGCCATGGGGTCACCCTTCAGGGCCAAT...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTACTGTAGTACCCAAGTaGGGAGGCTGCTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATTVVPK*GGCCDD
Trigger: ATCATCACAGCAGCCTCCTCACTTGGGTACTACAGT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGGTTCCTACTATGTATaGGATTCCTCAGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSGSYYV*DSSEAR
Trigger: TCTAGCTTCTGAGGAATCTCATACATAGTAGGAACC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAGGGCAAATCTCTACTTaGATAGTAGTGGCTCAGAAG +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIGQIST*IVVAQK
Trigger: CTTCTGAGCCACTACTATTCAAGTAGAGATTTGCCC...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGCTGAACACTTTGAGTaGAAGAAAACTGTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSAEHFE*KKTVQV
Trigger: AACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTAGTTCCTGCTGCAGCTaGATCTTCAAAACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATSSCCS*IFKTWH
Trigger: GTGCCAGGTTTTGAAGATGCAGCTGCAGCAGGAACT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGTCGTGCTTCTGCTCATaGCCTGCTCCGTCCGTCCCC +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQSCFCS*PAPSVP
Trigger: GGGGACGGACGGAGCAGGGCATGAGCAGAAGCACGA...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAACACTGGTGAGGCAATaGAGGTGTGTACCAGTAATA +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTITLVRQ*RCVPVI
Trigger: TATTACTGGTACACACCTGCATTGCCTCACCAGTGT...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTGGCCACCACTTCATTaGTACGCACATCTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELWPPLH*YAHLVQ
Trigger: TTGCACGAGATGTGCGTACCAATGAAGTGGTGGCCA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTCTGTGCTTCTACTGCTaGTCCATTATGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATLCFYC*SIMCLL
Trigger: CAGGAGGCACATAATGGACCAGCAGTAGAAGCACAG...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAGTGAACACCAACACTaGGAAGGAGGTAGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSEHQH*EGGSVN
Trigger: ATTAACACTACCTCCTTCCCAGTGTTGGTGTTCACT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 72 bp CTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCCATaGAAGGCTCATAGGTTTGTTAATGCAATCCTCACA +
Preference number: 4 (lower is better)
Translates to: LSGPLSPFWSSP*KAHRFVNAILT
Trigger: TGTGAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCGGGTAGCTGTGGCTaGATGCCTCAGGGGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLPGSCG*MPQGRD
Trigger: ATCTCTCCCCTGAGGCATTCAGCCACAGCTACCCGG...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATTGGCCCTGAAGGGTaGCCCCATGGCTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILIGPEG*PHGWGP
Trigger: TGGACCCCAGCCATGGGGTCACCCTTCAGGGCCAAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAATCCTGGTGTTTCAGTaGGGATTAACCTTTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSILVFQ*GLTFFS
Trigger: AGAGAAAAAGGTTAATCCTCACTGAAACACCAGGAT...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATTTGAAGAAGAGCTCTaGAATTTCAGGGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIFEEEL*NFRVLQ
Trigger: CTGAAGGACCCTGAAATTGCAGAGCTCTTCTTCAAA...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTTTCCTGTGCTTCTACTaGTGGTCCATTATGTGCCTC +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATFLCFY*WSIMCL
Trigger: GAGGCACATAATGGACCAGCAGTAGAAGCACAGGAA...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCCGGAACTCCAGTTCTTaGATAGATTCATGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTARNSSS*IDSCCR
Trigger: CCGACAGCATGAATCTATGCAAGAACTGGAGTTCCG...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAGGCTGGGGTCCACCTTaGATTGGATGGCCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLGWGPP*IGWPQA
Trigger: AGCTTGGGGCCATCCAATGCAAGGTGGACCCCAGCC...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGGGTCCACCTTGCATTaGATGGCCCCAAGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPGSTLH*MAPSLW
Trigger: CCACAAGCTTGGGGCCATCCAATGCAAGGTGGACCC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTCCGCCTCAGAGCCTaGGGGCTATTGCGGACTCCC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVRLRA*GLLRTP
Trigger: GGGAGTCCGCAATAGCCCCCAGGCTCTGAGGCGGAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGCTGCCTGCTGTGAGTaGCTCATAAGAATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATAACCE*LIRIWD
Trigger: ATCCCAAATTCTTATGAGCCACTCACAGCAGGCAGC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTTGATGGCATCCTGCTaGGCAGTCAGCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILLMASC*AVSCLD
Trigger: ATCAAGACAGCTGACTGCTCAGCAGGATGCCATCAA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGCCTGCTCTGTTAGTTaGTGGCATCCTGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPACSVS*WHPAEQ
Trigger: CTGCTCAGCAGGATGCCATCAACTAACAGAGCAGGC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTCTCACTCTTGTCATCTaGGACATCTGGAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATLTLVI*DIWKTV
Trigger: AACAGTCTTCCAGATGTCTCAGATGACAAGAGTGAG...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTCTCACTCTTGTCATCTaGGACATCTGGAAGACTGTT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELLTLVI*DIWKTV
Trigger: AACAGTCTTCCAGATGTCTCAGATGACAAGAGTGAG...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTGGAGATTGTGGATCTaGTGCTCTTGTTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELWRLWI*CSCSRI
Trigger: GATCCTAGAACAAGAGCATCAGATCCACAATCTCCA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGCAAAATTGTTACGCTaGGTTTCAAGATCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPAKLLR*VSRSLS
Trigger: AGACAAAGATCTTGAAACTCAGCGTAACAATTTTGC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCACTGTAGTACCCAAGTaGGGAGGCTGCTGTGATGAT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILTVVPK*GGCCDD
Trigger: ATCATCACAGCAGCCTCCTCACTTGGGTACTACAGT...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAAAAGCCCCTTTCACTaGTATTACAAGTACATGTCA +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPKSPFH*YYKYMS
Trigger: TGACATGTACTTGTAATATCAGTGAAAGGGGCTTTT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTAAGACATATAGTGAGTaGACACCAACACTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELKTYSE*TPTLGR
Trigger: CCTTCCCAGTGTTGGTGTTCACTCACTATATGTCTT...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTGGATTTTACCCTATaGAACCACCTGCAGCTCCTA +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTALDFTL*NHLQLL
Trigger: TAGGAGCTGCAGGTGGTTTCATAGGGTAAAATCCAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTCCTTAATAATATCCTaGCATTTCTCAGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPSLIIS*HFSVDC
Trigger: GCAGTCTACTGAGAAATGGCAGGATATTATTAAGGA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGTCCAGCTCTCTTACTaGATCCTTTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAVQLSY*ILCPLN
Trigger: ATTCAGAGGACAAAGGATGCAGTAAGAGAGCTGGAC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGCACTCTGCTTCCTGTaGTTCATCCAAACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPALCFL*FIQTQG
Trigger: GCCCTGCGTTTGGATGAAGCACAGGAAGCAGAGTGC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTGCGGACTCCCATACTaGTACCTCGAGGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPCGLPY*YLEVPL
Trigger: AAGGGGTACCTCGAGGTAGCAGTATGGGAGTCCGCA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCATCTCCTCACTCTGCTaGGGGACATACCCACCATAT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILISSLC*GTYPPY
Trigger: ATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGAT...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTGGGCTCAGTTAAGATaGCGCGGGGAAGTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNWAQLR*RGEVPG
Trigger: TCCCGGCACTTCCCCGCGCCATCTTAACTGAGCCCA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTCAGCAAGTTTCACCTaGCCTGGTTCTGTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILSASFT*PGSVRR
Trigger: CCTTCTGACAGAACCAGGCCAGGTGAAACTTGCTGA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCCTGTGCTTCTACTGCTaGTCCATTATGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILLCFYC*SIMCLL
Trigger: CAGGAGGCACATAATGGACCAGCAGTAGAAGCACAG...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGTGGTGGGCCACCCATaGGATGACCCCAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSVVGHP*DDPSEV
Trigger: GACCTCACTGGGGTCATCCCATGGGTGGCCCACCAC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTGGTGGGCCACCCATaGGATGACCCCAGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVVGHP*DDPSEV
Trigger: GACCTCACTGGGGTCATCCCATGGGTGGCCCACCAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAGCCCCAAGCTTGTGGTaGGCCACCCATGGGATGACC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPAPSLW*ATHGMT
Trigger: GGTCATCCCATGGGTGGCCCACCACAAGCTTGGGGC...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAAGTAAAAGTACTGTTTaGGGTCTTGGGCATTATAGA +
Preference number: 4 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSSKSTV*GLGHYR
Trigger: TCTATAATGCCCAAGACCCCAAACAGTACTTTTACT...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAATGCTGGGAATGGATTaGTTACTTCCAACACTATTA +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTIMLGMD*LLPTLL
Trigger: TAATAGTGTTGGAAGTAATCAATCCATTCCCAGCAT...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCTAGGTATTGTCTTTaGCGTCGAAGAAGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELSRYCL*RRRRLA
Trigger: AGCTAACCTTCTTCGACGTCAAAGACAATACCTAGA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCGAAAACTGTGCAGGTTaGATTACCCGTACTTTGGGG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILENCAG*ITRTLG
Trigger: CCCCAAAGTACGGGTAATTCAACCTGCACAGTTTTC...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGTTTACCAGCTGGTGCTaGCAGAGAGGGAGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQFTSWC*QRGRGF
Trigger: GAAGCCTCTCCCTCTCTGTCAGCACCAGCTGGTAAA...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTTCAGATGTTCGCGAGTaGCTAGTGCTTTCGGCCCGC +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTSDVRE*LVLSAR
Trigger: GCGGGCCGAAAGCACTAGGCACTCGCGAACATCTGA...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGTCTGGTTTGGATTTTaGAGGTATCCTGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATVWFGF*RYPETA
Trigger: AGCAGTTTCAGGATACCTGCAAAATCCAAACCAGAC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTCTTCTGCTCATGCCCTaGTCCGTCCGTCCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVLLLMP*SVRPPE
Trigger: TTCTGGGGGACGGACGGAGCAGGGCATGAGCAGAAG...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTCAGCTCCAGCGGAATTaGCACTCTCAATTATTAAGT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELQLQRN*HSQLLS
Trigger: ACTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTG...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCAAGTTTCACCTGGCCTaGTTCTGTCAGAAGGATATT +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAKFHLA*FCQKDI
Trigger: AATATCCTTCTGACAGAACCAGGCCAGGTGAAACTT...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTAAGTTTCACCTGGCCTaGTTCTGTCAGAAGGATATT +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELKFHLA*FCQKDI
Trigger: AATATCCTTCTGACAGAACCAGGCCAGGTGAAACTT...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTTCTCCATGGCAGCCTaGTGTTTCTTGATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELFSMAA*CFLISF
Trigger: GAAACTTATCAAGAAACACCAGGCTGCCATGGAGAA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTACCCCAGTGAGGTCCTaGACCCCCAGTAGGGTTGTG +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVTPVRS*TPSRVV
Trigger: CACAACCCTACTGGGGGTCCAGGACCTCACTGGGGT...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTCCACCTTGCATTGGATaGCCCCAAGCTTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPPPCIG*PQACGG
Trigger: CCCACCACAAGCTTGGGGCCATCCAATGCAAGGTGG...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGTTTGGTCATTAGTTTaGTCTAGGCAAAGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELVWSLV*SRQRVP
Trigger: TGGCACTCTTTGCCTAGACCAAACTAATGACCAAAC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTTTAGCCACCACAGCTaGTCCTGGGCTACTACAGGT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLFSHHS*SWATTG
Trigger: ACCTGTAGTAGCCCAGGACCAGCTGTGGTGGCTAAA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATGCCTGCTCTGTTAGTTaGTGGCATCCTGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNACSVS*WHPAEQ
Trigger: CTGCTCAGCAGGATGCCATCAACTAACAGAGCAGGC...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTTTGGCTGCTGGCACTaGTGGACATGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPFGCWH*WTCWEW
Trigger: CCATTCCCAGCATGTCCATCAGTGCCAGCAGCCAAA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTTGCCTCGTAACCAGTaGTGCTGTCCGTATAGTAGC +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPLPRNQ*CCPYSS
Trigger: GCTACTATACGGACAGCATCACTGGTTACGAGGCAA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTGCTCTAAGTCCTTCTaGGTCTGTCTTTTGTTTAAC +
Preference number: 4 (lower is better)
Translates to: HVSFISSLCCGTYPPYELCSKSF*VCLLFN
Trigger: GTTAAACAAAAGACAGACTCAGAAGGACTTAGAGCA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGGACATACCCACCATATaGACTTTCAGGGCCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLDIPTI*TFRAPL
Trigger: GAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTC...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTTACCTAAAAACCGGTaGCCTGGAGCATGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPLPKNR*PGAWAE
Trigger: TTCAGCCCATGCTCCAGGTCACCGGTTTTTAGGTAA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCAGACACTTCACATTGTaGGCACAGGACAAAATGCAG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILRHFTL*AQDKMQ
Trigger: CTGCATTTTGTCCTGTGCTCACAATGTGAAGTGTCT...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTAGCACCATGTGTAATTaGTGCTATTTCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: DDVCRQFLLADSSSGIATSTMCN*CYFHFL
Trigger: CAAGAAGTGGAAATAGCAGCAATTACACATGGTGCT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTCCTGCTCATGTTCTTaGATTTGCCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILSCSCS*ICLVTS
Trigger: ACTGGTTACGAGGCAAATGCAAGAACATGAGCAGGA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTCTGTGCGCTCATTCTaGAAAGCCAACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILSVRSF*KANISS
Trigger: AGAAGAGATGTTGGCTTTGCAGAATGAGCGCACAGA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGTAGCTGTGGCTGAATaGCTCAGGGGAGAGATTAGA +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLVAVAE*LRGEIR
Trigger: TCTAATCTCTCCCCTGAGGCATTCAGCCACAGCTAC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGTAGCTGTGGCTGAATaGCTCAGGGGAGAGATTAGA +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPVAVAE*LRGEIR
Trigger: TCTAATCTCTCCCCTGAGGCATTCAGCCACAGCTAC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTGCGGACTCCCATACTaGTACCTCGAGGTACCCCTT +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPCGLPY*YLEVPL
Trigger: AAGGGGTACCTCGAGGTAGCAGTATGGGAGTCCGCA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGAGCCTGGGGGCTATTaGGGACTCCCATACTGCTAC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVEPGGY*GLPYCY
Trigger: GTAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTGGCCACCACTTCATTaGTACGCACATCTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPWPPLH*YAHLVQ
Trigger: TTGCACGAGATGTGCGTACCAATGAAGTGGTGGCCA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTTAGACATCACTGTGTaGTCTCCCTCCATCATGTCT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILLDITV*SPSIMS
Trigger: AGACATGATGGAGGGAGACCACACAGTGATGTCTAA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATTATACTCTCTTTTCTaGGACTCGAGAAAACTATTC +
Preference number: 4 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTILYSLF*DSRKLF
Trigger: GAATAGTTTTCTCGAGTCCCAGAAAAGAGAGTATAA...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGCTGTCGGAGTAGCATaGCATGCTCTAAGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVAVGVA*HALSPS
Trigger: AGAAGGACTTAGAGCATGCCATGCTACTCCGACAGC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGCAAAAGAGAGCTGTCTaGCAATACACCAGGACAGCC +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLQKRAV*QYTRTA
Trigger: GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTG...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCGATCTTTGTCTAATCTaGGGCGATGTTCATCCATCT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILDLCLI*GDVHPS
Trigger: AGATGGATGAACATCGCCTCAGATTAGACAAAGATC...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTGTTTAACTCCTCCCTaGCAAGGTCCTGCTCTAAGT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLCLTPP*QGPALS
Trigger: ACTTAGAGCAGGACCTTGTCAGGGAGGAGTTAAACA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAAAGTCATTGGCTCAGTaGCTCCTGGTTCACTGTGGC +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILKSLAQ*LLVHCG
Trigger: GCCACAGTGAACCAGGAGTCACTGAGCCAATGACTT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGTTTAGCACTGAGGCTTaGGACTTGTGGAAGTGGTGT +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQFSTEA*DLWKWC
Trigger: ACACCACTTCCACAAGTCTCAAGCCTCAGTGCTAAA...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGACCCTACTGGAGATCTaGATGGACTCAGTAACTCTC +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQTLLEI*MDSVTL
Trigger: GAGAGTTACTGAGTCCATTCAGATCTCCAGTAGGGT...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCAGCTCCTCTTTAAGCTaGTCTTTTCGAAGTTTATAC +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTASSSLS*SFRSLY
Trigger: GTATAAACTTCGAAAAGAGCAGCTTAAAGAGGAGCT...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGAACAGCTCCAGTTCCTaGTGCAGCTGCATCTTCAAA +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLNSSSS*CSCIFK
Trigger: TTTGAAGATGCAGCTGCAGCAGGAACTGGAGCTGTT...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTCAGCAAGTTTCACCTaGCCTGGTTCTGTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLSASFT*PGSVRR
Trigger: CCTTCTGACAGAACCAGGCCAGGTGAAACTTGCTGA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTTCCCACAAAGGAATTaGCAGGTGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPFPQRN*QVMPWK
Trigger: CTTCCATGGCATCACCTGCCAATTCCTTTGTGGGAA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTTAACACTACTGCTTTaGCTGCTGGCACTGATGGAC +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLLTLLL*LLALMD
Trigger: GTCCATCAGTGCCAGCAGCCAAAGCAGTAGTGTTAA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTGCATCTTCAAAACCTaGCACTCTGCTTCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLCIFKT*HSASCA
Trigger: AGCACAGGAAGCAGAGTGCCAGGTTTTGAAGATGCA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGCTGCCTGCTGTGAGTaGCTCATAAGAATTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLAACCE*LIRIWD
Trigger: ATCCCAAATTCTTATGAGCCACTCACAGCAGGCAGC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTATAAGACATTTTCTTaGTGGCCACCACTTCATTGG +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILYKTFS*WPPLHW
Trigger: CCAATGAAGTGGTGGCCATCAAGAAAATGTCTTATA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGGATGTAGGTCGATCTTaGGGGATTTTCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLDVGRS*GIFWRQ
Trigger: TTGCCTCCAGAAAATCCCTCAAGATCGACCTACATC...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATTTGGCTGCTGGCACTaGTGGACATGCTGGGAATGG +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRFGCWH*WTCWEW
Trigger: CCATTCCCAGCATGTCCATCAGTGCCAGCAGCCAAA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGTCTTCTGAATTGTGTTaGGGTGGCGGAACTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQSSELC*GGGTPV
Trigger: AACTGGAGTTCCGCCACCTCAACACAATTCAGAAGA...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTCACAGCGCATCTTCTaGATTGTGTTGAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVSQRIF*IVLRWR
Trigger: CCGCCACCTCAACACAATTCAGAAGATGCGCTGTGA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGATATGCTGCCTGCTGTaGGTGGCTCATAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLICCLL*VAHKNL
Trigger: CAAATTCTTATGAGCCACTCACAGCAGGCAGCATAT...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAGGCAAAGAGTGCCATTaGGAGGGACTTAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILGKECH*EGLREF
Trigger: GAACTCTCTAAGTCCCTCTCAATGGCACTCTTTGCC...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAGAAACTCCTACAGGTaGGGATTCATGGCAACTCGA +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQRNSYR*GFMATR
Trigger: TCGAGTTGCCATGAATCCTCACCTGTAGGAGTTTCT...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTGATAAGCCTCCACTGTaGGCGTCTGTTTGGTCCAAA +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTDKPPL*ASVWSK
Trigger: TTTGGACCAAACAGACGCTCACAGTGGAGGCTTATC...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGGTCCAGCTCTCTTACTaGATCCTTTGTCCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQVQLSY*ILCPLN
Trigger: ATTCAGAGGACAAAGGATGCAGTAAGAGAGCTGGAC...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTCTGTGCGCTCATTCTaGAAAGCCAACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPSVRSF*KANISS
Trigger: AGAAGAGATGTTGGCTTTGCAGAATGAGCGCACAGA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTTCGTATTCGTTCTGTaGGCTCATTCTGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLFVFVL*AHSAKP
Trigger: TGGCTTTGCAGAATGAGCGCACAGAACGAATACGAA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGACACTGGTGAGGCAATaGAGGTGTGTACCAGTAATA +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQTLVRQ*RCVPVI
Trigger: TATTACTGGTACACACCTGCATTGCCTCACCAGTGT...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATCTCCTCACTCTGCTaGGGGACATACCCACCATAT +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILISSLC*GTYPPY
Trigger: ATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTTCATCTCCTCACTCTaGTGCGGGACATACCCACCA +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVFISSL*CGTYPP
Trigger: TGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTTGGGTGGGTAGGAAGTaGAAGTTTAAGAAACCCACA +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVWVGRK*KFKKPT
Trigger: TGTGGGTTTCTTAAACTTGCACTTCCTACCCACCCA...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTATTCCCACAAAGGAATTaGCAGGTGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLFPQRN*QVMPWK
Trigger: CTTCCATGGCATCACCTGCCAATTCCTTTGTGGGAA...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTATACTCTCTTTTCTaGGACTCGAGAAAACTATTC +
Preference number: 4 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTALYSLF*DSRKLF
Trigger: GAATAGTTTTCTCGAGTCCCAGAAAAGAGAGTATAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAGCTTCAATCTCTCTaGCTTGACGTTCCAACAGGC +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQKLQSL*LDVPTG
Trigger: GCCTGTTGGAACGTCAAGCCAGAGAGATTGAAGCTT...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGGCAATTTGCAAATATaGCATCAAACACCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLGNLQI*HQTPPA
Trigger: TGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCCTTGGTTCATCTGTATaGATGAAGTCACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPLGSSV*MKSRWH
Trigger: ATGCCAACGTGACTTCATTCATACAGATGAACCAAG...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAGTCCGGCCAACACCATaGTCTTGTTCCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPVRPTP*SCSSSS
Trigger: AGAAGAAGAGGAACAAGATCATGGTGTTGGCCGGAC...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTCCGGCCAACACCATaGTCTTGTTCCTCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVRPTP*SCSSSS
Trigger: AGAAGAAGAGGAACAAGATCATGGTGTTGGCCGGAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGATCTTTGTCTAATCTaGGGCGATGTTCATCCATCT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLDLCLI*GDVHPS
Trigger: AGATGGATGAACATCGCCTCAGATTAGACAAAGATC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATCAATCTCTCTGGCTTaGCGTTCCAACAGGCTTCGT +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPSISLA*RSNRLR
Trigger: ACGAAGCCTGTTGGAACGTCAAGCCAGAGAGATTGA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCCATTGGATATTTGTaGAGTGACACTCGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLPIGYL*SDTRAS
Trigger: AGAAGCACGAGTGTCACTTCACAAATATCCAATGGG...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGCCCAAAAGTGATAACTaGAGCCATTTTGCTACGTTC +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQPKSDN*SHFATF
Trigger: GAACGTAGCAAAATGGCTTCAGTTATCACTTTTGGG...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTCATGGCAACTCGACTaGCATACCTGGGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSWQLD*HTWERL
Trigger: AAGTCTTTCCCAGGTATGTCAGTCGAGTTGCCATGA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTTACCAACAAATCCTTaGCCTAGAGTACTAAGCATA +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILLPTNP*PRVLSI
Trigger: TATGCTTAGTACTCTAGGTCAAGGATTTGTTGGTAA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGTGGCCATTTCCTGTTaGTTTTACAGTTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVVAISC*FYSSGE
Trigger: TTCTCCTGAACTGTAAAATCAACAGGAAATGGCCAC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTATCGTGCAAAATACACTaGTCCAAAGCTTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILSCKIH*SKASMA
Trigger: GGCCATGGAAGCTTTGGAGCAGTGTATTTTGCACGA...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTTCCTGTGCTTCTACTaGTGGTCCATTATGTGCCTC +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNFLCFY*WSIMCL
Trigger: GAGGCACATAATGGACCAGCAGTAGAAGCACAGGAA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGCGAACTTCCATGACATaGTTTCGTCTTAGTTCTCGT +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQRTSMT*FRLSSR
Trigger: ACGAGAACTAAGACGAAAGCATGTCATGGAAGTTCG...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGTCTGGTTTGGATTTTaGAGGTATCCTGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLVWFGF*RYPETA
Trigger: AGCAGTTTCAGGATACCTGCAAAATCCAAACCAGAC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTAGTTCCTGCTGCAGCTaGATCTTCAAAACCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSSSCCS*IFKTWH
Trigger: GTGCCAGGTTTTGAAGATGCAGCTGCAGCAGGAACT...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTAGCTCCAGTTCCTGCTaGAGCTGCATCTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVSSSSC*SCIFKT
Trigger: GGTTTTGAAGATGCAGCTGCAGCAGGAACTGGAGCT...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATGGCAGGTGATGCCATaGAAGCAGAGCCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRWQVMP*KQSQSQ
Trigger: CTGACTTTGGCTCTGCTTCCATGGCATCACCTGCCA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTTAGACATCACTGTGTaGTCTCCCTCCATCATGTCT +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLLDITV*SPSIMS
Trigger: AGACATGATGGAGGGAGACCACACAGTGATGTCTAA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGGATACAAAACCCTACTaGAGATCTGAATGGACTCAG +
Preference number: 4 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQDTKPY*RSEWTQ
Trigger: CTGAGTCCATTCAGATCTCCAGTAGGGTTTTGTATC...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCCTTCTCTCCCAGTaGCCATTTCCTGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPILLSQ*PFPVDF
Trigger: AAAATCAACAGGAAATGGCCACTGGGAGAGAAGGAT...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATGTAGTGGCTCAGAAGTaGTGGAAGGTGCACAAAGAA +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNVVAQK*WKVHKE
Trigger: TTCTTTGTGCACCTTCCACCACTTCTGAGCCACTAC...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGTGGATACGAGACAAATaGTCACATAGACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQWIRDK*SHRPPR
Trigger: TCTGGGTGGTCTATGTGACCATTTGTCTCGTATCCA...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGGTTCATCTGTATGAATaGAGTCACGTTGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLVHLYE*SHVGIN
Trigger: GTTTATGCCAACGTGACTTCATTCATACAGATGAAC...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGATGTAGGTCGATCTTaGGGGATTTTCTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVDVGRS*GIFWRQ
Trigger: TTGCCTCCAGAAAATCCCTCAAGATCGACCTACATC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGCCTTTGTCCTCTGAATaGGATCTATTAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLPLSSE*DLLTRF
Trigger: AAACCGTGTTAATAGATCTCATTCAGAGGACAAAGG...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGTCATCAGTTGCTTTTaGTGTTGTCGCCTCATTCGC +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSVISCF*CCRLIR
Trigger: GCGAATGAGGCGACAACATCAAAAGCAACTGATGAC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTACCTCAGCTTGCATCTTaGTTTTGCTCTGATACGCAT +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILPQLAS*FCSDTH
Trigger: ATGCGTATCAGAGCAAAATCAAGATGCAAGCTGAGG...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTTGGATATTTGTGAAGTaGCACTCGTGCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTWIFVK*HSCFCS
Trigger: TGAGCAGAAGCACGAGTGTCACTTCACAAATATCCA...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTATGGATATTTGTGAAGTaGCACTCGTGCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILWIFVK*HSCFCS
Trigger: TGAGCAGAAGCACGAGTGTCACTTCACAAATATCCA...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTTGTGTGATGTTAACTTaGTGCCAAATGGTCACTAAG +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVCVMLT*CQMVTK
Trigger: CTTAGTGACCATTTGGCATCAAGTTAACATCACACA...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTAAATGTGAGATAGAGTaGCCCCAAGGAACTTTTTAC +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVKCEIE*PQGTFY
Trigger: GTAAAAAGTTCCTTGGGGTCACTCTATCTCACATTT...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATGTTCTTTGTCCACTATaGAAACCCTACGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENVLCPL*KPYGLR
Trigger: CCTGAGCCCGTAGGGTTTTCATAGTGGACAAAGAAC...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTCGTGCAAAATACACTaGTCCAAAGCTTCCATGGCC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVSCKIH*SKASMA
Trigger: GGCCATGGAAGCTTTGGAGCAGTGTATTTTGCACGA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTCCTGCTCATGTTCTTaGATTTGCCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNSCSCS*ICLVTS
Trigger: ACTGGTTACGAGGCAAATGCAAGAACATGAGCAGGA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTTTTCTTATCATCTTTaGAGAGGAATCACCATCAGT +
Preference number: 4 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILFSYHL*RGITIS
Trigger: ACTGATGGTGATTCCTCTGCAAAGATGATAAGAAAA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTCAATCAGTAGTCCTTaGATACAAGAGGCAAGTCCG +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSISSP*IQEASP
Trigger: CGGACTTGCCTCTTGTATGCAAGGACTACTGATTGA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTAGACCACCCAGAATCTaGAAATGTTGGGCAGTTACA +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPRPPRI*KCWAVT
Trigger: TGTAACTGCCCAACATTTGCAGATTCTGGGTGGTCT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTGCTATCCCGATCCTTaGTTCATCTGTATGAATGAA +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPCYPDP*FICMNE
Trigger: TTCATTCATACAGATGAACCAAGGATCGGGATAGCA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTTAACACTACTGCTTTaGCTGCTGGCACTGATGGAC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVLTLLL*LLALMD
Trigger: GTCCATCAGTGCCAGCAGCCAAAGCAGTAGTGTTAA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTTCTCCATGGCAGCCTaGTGTTTCTTGATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLFSMAA*CFLISF
Trigger: GAAACTTATCAAGAAACACCAGGCTGCCATGGAGAA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTTTACAGCCAGCCTCTaGATACCAGATATAGCATTT +
Preference number: 4 (lower is better)
Translates to: RQCRCVPVITYFNICCLLFTASL*IPDIAF
Trigger: AAATGCTATATCTGGTATCCAGAGGCTGGCTGTAAA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATGCTACAACCTGGTTaGGGGCACTATCATGTTAGA +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILMLQPG*GHYHVR
Trigger: TCTAACATGATAGTGCCCCCAACCAGGTTGTAGCAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATGGCAATGCTACAACCTaGTTGGGGGCACTATCATGT +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENGNATT*LGALSC
Trigger: ACATGATAGTGCCCCCAACCAGGTTGTAGCATTGCC...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAGGATATCTATCTTTaGGTGGGTAGGAAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQKDIYL*VGRKCK
Trigger: CTTGCACTTCCTACCCACCCAAAGATAGATATCCTT...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTGGCCCTAATATACCTTaGATACTAAGCCAAGCCATG +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTGPNIP*ILSQAM
Trigger: CATGGCTTGGCTTAGTATCCAAGGTATATTAGGGCC...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTACCTTTGTCCTCTGAATaGGATCTATTAACACGGTTT +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLPLSSE*DLLTRF
Trigger: AAACCGTGTTAATAGATCTCATTCAGAGGACAAAGG...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAGCATCCTTTGTCCTCTaGATGAGATCTATTAACACG +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILASFVL*MRSINT
Trigger: CGTGTTAATAGATCTCATTCAGAGGACAAAGGATGC...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATGGAGATTGTGGATCTaGTGCTCTTGTTCTAGGATC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPWRLWI*CSCSRI
Trigger: GATCCTAGAACAAGAGCATCAGATCCACAATCTCCA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTATCGATTACGATAGTGTaGTTTGTGACGAGATACTTG +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLSITIV*FVTRYL
Trigger: CAAGTATCTCGTCACAAATCACACTATCGTAATCGA...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTCCTGCTCTAAGTTATaGCGCCCAAGTAACATTCTT +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSCSKL*RPSNIL
Trigger: AAGAATGTTACTTGGGCGTCATAACTTAGAGCAGGA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTTTTGATGCTGTAATCTaGTCAACTCACAGCGCATCT +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTFDAVI*STHSAS
Trigger: AGATGCGCTGTGAGTTGATCAGATTACAGCATCAAA...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTGTAGTCTCCAGCAGGTaGTTTCTTAATGCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTVVSSR*FLNALY
Trigger: GTACAAAGCATTAAGAAATCACCTGCTGGAGACTAC...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGAGCAGCCAGATCTATaGATAATTTTTAAGGGTATC +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVEQPDL*IIFKGI
Trigger: GATACCCTTAAAAATTATTCATAGATCTGGCTGCTC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTTTGATATTTCCCCACTaGTTCAGAAAGTGCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPLIFPH*FRKCLL
Trigger: GAGCAAGCACTTTCTGAATCAGTGGGGAAATATCAA...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGTGTTTCAAGTACAATaGAGTCATTTTTCACAGGTG +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPVFQVQ*SHFSQV
Trigger: CACCTGTGAAAAATGACTTCATTGTACTTGAAACAC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGCCTTAACTGAGGACTaGAATAACAAAACCAAACAA +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPALTED*NNKTKQ
Trigger: TTGTTTGGTTTTGTTATTTCAGTCCTCAGTTAAGGC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTATCATTTCTAAACCACTaGCCTCAGAGTTGCCATAGA +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILSFLNH*PQSCHR
Trigger: TCTATGGCAACTCTGAGGTCAGTGGTTTAGAAATGA...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTAACTATAAGGTATGCTaGACCAGAAGAATACTGACA +
Preference number: 4 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVNYKVC*TRRILT
Trigger: TGTCAGTATTCTTCTGGTTCAGCATACCTTATAGTT...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTTTCGTATTCGTTCTGTaGGCTCATTCTGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSFVFVL*AHSAKP
Trigger: TGGCTTTGCAGAATGAGCGCACAGAACGAATACGAA...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTTCAACATATGCTGCCTaGTGTGAGTGGCTCATAAGA +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSSTYAA*CEWLIR
Trigger: TCTTATGAGCCACTCACAGCAGGCAGCATATGTTGA...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTATGCAAAAGTGATCTaGTTCCCTATTCCACCCATC +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNYAKVI*FPIPPI
Trigger: GATGGGTGGAATAGGGAAGCAGATCACTTTTGCATA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCGATTCAGAAAGTGCTTaGTCTTTCTCTAGGATATCT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPDSESA*SFSRIS
Trigger: AGATATCCTAGAGAAAGAGCAAGCACTTTCTGAATC...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATCCATTATGTGCCTCCTaGAAAAGGAGTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNPLCAS*KRSFFI
Trigger: GATGAAGAAACTCCTTTTCCAGGAGGCACATAATGG...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATTTGTGCTCACTCTTTaGTGTAGTCTCCAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRFVLTL*CSLQQV
Trigger: CACCTGCTGGAGACTACACCAAAGAGTGAGCACAAA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGTTACACCAGTGTGTGTaGCTTCAAATACAAGACTCT +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQLHQCV*LQIQDS
Trigger: AGAGTCTTGTATTTGAAGCCACACACACTGGTGTAA...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTAGTGAATGGCACAAATaGAGAAATGCAAAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTSEWHK*RNAKEV
Trigger: CACCTCCTTTGCATTTCTCCATTTGTGCCATTCACT...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCAGCCTTTAATACTTTaGCTACAAGGCATATCAGAG +
Preference number: 4 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLQPLIL*LQGISE
Trigger: CTCTGATATGCCTTGTAGCCAAAGTATTAAAGGCTG...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTCCCAGGCAATGTATTTaGGGCTCAGAAAAAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTPRQCI*GSEKAK
Trigger: TTTTGCTTTTTCTGAGCCCCAAATACATTGCCTGGG...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGGACAGCAGCACATTTaGAATGGGAACCAAAAGAGA +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSGQQHI*NGNQKR
Trigger: TCTCTTTTGGTTCCCATTCCAAATGTGCTGCTGTCC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTATACCAGTTAGTGCTGTaGACCATTTATACCAAAAGG +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLYQLVL*TIYTKR
Trigger: CCTTTTGGTATAAATGGTCCACAGCACTAACTGGTA...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTCTTGGTTCATCTGTATaGATGAAGTCACGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVLGSSV*MKSRWH
Trigger: ATGCCAACGTGACTTCATTCATACAGATGAACCAAG...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGCATCCTTTGTCCTCTaGATGAGATCTATTAACACG +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSASFVL*MRSINT
Trigger: CGTGTTAATAGATCTCATTCAGAGGACAAAGGATGC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTTGTCGAACTTCCATaGCATGCTTTCGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVVELP*HAFVLV
Trigger: AACTAAGACGAAAGCATGTCATGGAAGTTCGACAAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTCCAGTTTCCTTAAAATaGATCCCAGAAACTCCTACA +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTPVSLK*IPETPT
Trigger: TGTAGGAGTTTCTGGGATTCATTTTAAGGAAACTGG...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGGTCTCTTCCCTTGTATaGGTGAAATTTTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQVSSLV*VKFWKS
Trigger: AGATTTCCAAAATTTCACTCATACAAGGGAAGAGAC...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATCTCTCCACTTTTTCATaGCAAACTACCTACAGATGT +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNLSTFS*QTTYRC
Trigger: ACATCTGTAGGTAGTTTGTCATGAAAAAGTGGAGAG...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATAGCAAAATGTGCCACTaGGAGAAACCTGTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENSKMCH*EKPVPY
Trigger: ATAGGGAACAGGTTTCTCTCAGTGGCACATTTTGCT...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTTTTATCTGGACCCCTaGCTTGTGGGAATAACTAAA +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNFYLDP*LVGITK
Trigger: TTTAGTTATTCCCACAAGTCAGGGGTCCAGATAAAA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATCATGTTCTTGCATTTaGCTCGTAACCAGTGATGCT +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPSCSCI*LVTSDA
Trigger: AGCATCACTGGTTACGAGGCAAATGCAAGAACATGA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGGAAAGAGTTTTTGTATaGAAAAGTGATCTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQERVFV*KSDLLP
Trigger: GGGAAGCAGATCACTTTTGCATACAAAAACTCTTTC...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAGCACAAATGGAGAAATaGAAAGGAGGTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILAQMEK*KGGVSS
Trigger: ACTTGAAACACCTCCTTTGCATTTCTCCATTTGTGC...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAAGAAGTGGTGGAAGGTaGACAAAGAACTTACTATTA +
Preference number: 4 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLRSGGR*TKNLLL
Trigger: TAATAGTAAGTTCTTTGTGCACCTTCCACCACTTCT...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTAGTGAAAGAAAACTGTaGAGGTTGAATTACCCGTAC +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSERKL*RLNYPY
Trigger: GTACGGGTAATTCAACCTGCACAGTTTTCTTTCACT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCCGGATTTCTAAGAAATaGATTTCCCTTGTCTATGTT +
Preference number: 4 (lower is better)
Translates to: HRFVNAILTQLVISLSTPRISKK*ISLVYV
Trigger: AACATAGACAAGGGAAATGCATTTCTTAGAAATCCG...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTATTTACATCCGACCATTaGTTTTGCAAAAGAGTTCCC +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILFTSDH*FCKRVP
Trigger: GGGAACTCTTTTGCAAAAGCAATGGTCGGATGTAAA...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTACCAACCCTGGCATTTaGACAAATAATGCAAATGGA +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPTNPGI*TNNANG
Trigger: TCCATTTGCATTATTTGTGCAAATGCCAGGGTTGGT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCACCATTATGTGCCTCCTaGAAAAGGAGTTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPPLCAS*KRSFFI
Trigger: GATGAAGAAACTCCTTTTCCAGGAGGCACATAATGG...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATGAATTACCCGTACTTTaGGGGGAATTCTGGGTATCA +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENELPVL*GEFWVS
Trigger: TGATACCCAGAATTCCCCCCAAAGTACGGGTAATTC...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATCAAAGGAAAAAGTGTTaGAAGGGTTCCAATAGCCCC +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENQRKKC*KGSNSP
Trigger: GGGGCTATTGGAACCCTTCCAACACTTTTTCCTTTG...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 72 bp CTATGTAGTGTGACGAGAATTTCAATAGATGGCAATTaGCAAATATGGCATCAAACACCTCCGGCATTTGAT +
Preference number: 4 (lower is better)
Translates to: LCSVTRISIDGN*QIWHQTPPAFD
Trigger: ATCAAATGCCGGAGGTGTTTGATGCCATATTTGCAAATTGCCATCTATTGAAATTCTCGTCACACTACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
3UTR CAA 72 bp AATACCAAATCCTTCTCTCCCAGTGGCCATTTCCTGTaGATTTTACAGTTCAGGAGAATCTTAGATGCTTTA +
Preference number: 4 (lower is better)
Translates to: NTKSFSPSGHFL*ILQFRRILDAL
Trigger: TAAAGCATCTAAGATTCTCCTGAACTGTAAAATCAACAGGAAATGGCCACTGGGAGAGAAGGATTTGGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTTCATCTGTATGAATaGAGTCACGTTGGCATAAAC +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVHLYE*SHVGIN
Trigger: GTTTATGCCAACGTGACTTCATTCATACAGATGAAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTTATAAGACATTTTCTTaGTGGCCACCACTTCATTGG +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSYKTFS*WPPLHW
Trigger: CCAATGAAGTGGTGGCCATCAAGAAAATGTCTTATA...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATGCTGGGAATGGATTaGTTACTTCCAACACTATTA +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILMLGMD*LLPTLL
Trigger: TAATAGTGTTGGAAGTAATCAATCCATTCCCAGCAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAGCAAAATTGTTACGCTaGGTTTCAAGATCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILAKLLR*VSRSLS
Trigger: AGACAAAGATCTTGAAACTCAGCGTAACAATTTTGC...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATTAGTGAGCTCAGTTTaGTGCTGTAATCTGATCAAC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPLVSSV*CCNLIN
Trigger: GTTGATCAGATTACAGCATCAAACTGAGCTCACTAA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTGACTTAAAATTTGGTTaGGAAAACCAGGACTTCAAC +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPDLKFG*ENQDFN
Trigger: GTTGAAGTCCTGGTTTTCTCAACCAAATTTTAAGTC...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATTTGAAGAAGAGCTCTaGAATTTCAGGGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRFEEEL*NFRVLQ
Trigger: CTGAAGGACCCTGAAATTGCAGAGCTCTTCTTCAAA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAAGCACCATGTGTAATTaGTGCTATTTCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPSTMCN*CYFHFL
Trigger: CAAGAAGTGGAAATAGCAGCAATTACACATGGTGCT...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATCATGTTCTTGCATTTaGCTCGTAACCAGTGATGCT +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRSCSCI*LVTSDA
Trigger: AGCATCACTGGTTACGAGGCAAATGCAAGAACATGA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTAAGTTTCTCCATTTCTaGAGCAAAATTGTTACGCTG +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPKFLHF*SKIVTL
Trigger: CAGCGTAACAATTTTGCTGCAGAAATGGAGAAACTT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATCAGCTCCAGCGGAATTaGCACTCTCAATTATTAAGT +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENQLQRN*HSQLLS
Trigger: ACTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTG...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGCAGGAGAATCTTAGATaGTTTAGCAGTAATTCCTTT +
Preference number: 4 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQQENLR*FSSNSF
Trigger: AAAGGAATTACTGCTAAAGCATCTAAGATTCTCCTG...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTAGTAAAAGTACTGTTTaGGGTCTTGGGCATTATAGA +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPSKSTV*GLGHYR
Trigger: TCTATAATGCCCAAGACCCCAAACAGTACTTTTACT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTCATGACAAACTACCTACAGATGTTCAGATTAGTATATCCAGTGGGCATCCTATTTCCACTAGTGAATaGCACAAATGGAGAAATGCA +
Preference number: 4 (lower is better)
Translates to: FHDKLPTDVQISISSGHPISTSE*HKWRNA
Trigger: TGCATTTCTCCATTTGTGCCATTCACTAGTGGAAAT...AGGATGCCCACTGGATATACTAATCTGAACATCTGTAGGTAGTTTGTCATGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATATATCTATCTTTGGGTaGGTAGGAAGTGCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNISIFG*VGSASL
Trigger: TAAACTTGCACTTCCTACCCACCCAAAGATAGATAT...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTCTTGTGTCTCTAGCTTaGATTATTCTTGGACACATG +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVLVSLA*IILGHM
Trigger: CATGTGTCCAAGAATAATCCAAGCTAGAGACACAAG...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGCAAATGGAGTGATATaGCCTTTAAGGAAGGAGTTA +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVANGVI*PLRKEL
Trigger: TAACTCCTTCCTTAAAGGCCATATCACTCCATTTGC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 72 bp AATTACATGATTTTTCACTCACAAGTGCTGAACACTTaGAGTGAAAGAAAACTGTGCAGGTTGAATTACCCG +
Preference number: 4 (lower is better)
Translates to: NYMIFHSQVLNT*SERKLCRLNYP
Trigger: CGGGTAATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAAAATCATGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATCGATTACGATAGTGTaGTTTGTGACGAGATACTTG +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRSITIV*FVTRYL
Trigger: CAAGTATCTCGTCACAAATCACACTATCGTAATCGA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR TCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAGTTTCTTTGATATTGTaGAATGCAAAGAAGGACAGC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPVSLIL*NAKKDS
Trigger: GCTGTCCTTCTTTGCATTTCACAATATCAAAGAAAC...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATTTCGCTCTTATGTTCTaGCAACTTGGTAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ENISQHDFKGNYRNSAENFALMF*QLGNSF
Trigger: AAAGCTGTTACCAAGTTGTCAGAACATAAGAGCGAA...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATTCTAATTTTATACTaGTATCCCGATCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: FVNAILTQLVISLSTPILILILY*YPDPWF
Trigger: GAACCAAGGATCGGGATAGCAGTATAAAATTAGAAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAAAGTTTCTCCATTTCTaGAGCAAAATTGTTACGCTG +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPKFLHF*SKIVTL
Trigger: CAGCGTAACAATTTTGCTGCAGAAATGGAGAAACTT...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATGTATATTCTCCTTCTaGTTTGAAAGCCACTCCTGT +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRCIFSF*FESHSC
Trigger: ACAGGAGTGGCTTTCAAAGCAGAAGGAGAATATACA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATTTGATATTGTGAAATaGAAAGAAGGACAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPFDIVK*KEGQQH
Trigger: GTGCTGCTGTCCTTCTTTGCATTTCACAATATCAAA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGAGCTTCTTCTTCTGCTTaGAAATGCTGTATATTCTCC +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRASSSA*KCCIFS
Trigger: GGAGAATATACAGCATTTCCAAGCAGAAGAAGAAGC...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp CTAAAGCATTTACAAATTATCAGATTGGAACAGTCCGGGGAAGTTATGTGCACTCTAAAGTCTGCTTTATaGTCTCAAAAAGACACTCAT +
Preference number: 4 (lower is better)
Translates to: LKHLQIIRLEQSGEVMCTLKSAL*SQKDTH
Trigger: ATGAGTGTCTTTTTGAGACCATAAAGCAGACTTTAG...AGTGCACATAACTTCCCCGGACTGTTCCAATCTGATAATTTGTAAATGCTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACAACTTCTCTCTAGCTaGCACAGACCTATAAACTTT +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRQLLSS*HRPINF
Trigger: AAAGTTTATAGGTCTGTGCCAGCTAGAGAGAAGTTG...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTTACAAATTATCAGATTaGAACAGTCCGGGGAAGTTA +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVYKLSD*NSPGKL
Trigger: TAACTTCCCCGGACTGTTCCAATCTGATAATTTGTA...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR TCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACTTTCTTGGCTGTTTTaGTCCTCAGCAAAGTATATA +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRLSWLF*SSAKYI
Trigger: TATATACTTTGCTGAGGATCAAAACAGCCAAGAAAG...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR GCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATCCTTAATAATATCCTaGCATTTCTCAGTAGACTGC +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRSLIIS*HFSVDC
Trigger: GCAGTCTACTGAGAAATGGCAGGATATTATTAAGGA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR GCA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTAAGTTTGTAAAGTACTaGAGCAACGAAAACAGCAAT +
Preference number: 4 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVKFVKY*SNENSN
Trigger: ATTGCTGTTTTCGTTGCTGCAGTACTTTACAAACTT...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CCA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTAGAATCTGCAAATGTTaGGCAGTTACATCCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SESACSFSRISQNPSNFSRICKC*AVTSFK
Trigger: TTTAAAGGATGTAACTGCCCAACATTTGCAGATTCT...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
3UTR CAA 72 bp TTGCAAATATGGCATCAAACACCTCCGGCATTTGATTaGTATTGGCTATATGTCTTTGTTTTTGTACAAACA +
Preference number: 4 (lower is better)
Translates to: LQIWHQTPPAFD*YWLYVFVFVQT
Trigger: TGTTTGTACAAAAACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATATTTGCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CCA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGATGTTCTTACTTTCCATaGTTCATTTCTCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRCSYFP*FISLCI
Trigger: AATGCAGAGAGAAATGAACCATGGAAAGTAAGAACA...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS CCA 90 bp GACCGGGGTCGAGGAGGCGCCCTCAGCGCTTGGGCTCAGTTAAGATaGCGCGGGGAAGTGCCGGGAGCCGTCTCCGTCGCCGCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: DRGRGGALSAWAQLR*RGEVPGAVSVAASG
Trigger: CCCCGAGGCGGCGACGGAGACGGCTCCCGGCACTTCCCCGCGCCATCTTAACTGAGCCCAAGCGCTGAGGGCGCCTCCTCGACCCCGGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 90 bp CCTTTCGCCGACAGGTCTGGGGCGGAGCAGGCAGGCGCAGCCCCCTaGAGCGCTCCGGTAGCCGCTACCAAAGGGAAGAGAGGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: PFADRSGAEQAGAAP*SAPVAATKGKRGRG
Trigger: CCCGCGGCCTCTCTTCCCTTTGGTAGCGGCTACCGGAGCGCTGCAGGGGGCTGCGCCTGCCTGCTCCGCCCCAGACCTGTCGGCGAAAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583121.5
CDS GCA 90 bp AAGCTGTCCGCCTCAGAGCCTGGGGGCTATTGCGGACTCCCATACTaGTACCTCGAGGTACCCCTTGCATTGGCCCTGAAGGGTGACCCC +
Preference number: 5 (lower is better)
Translates to: KLSASEPGGYCGLPY*YLEVPLALALKGDP
Trigger: GGGGTCACCCTTCAGGGCCAATGCAAGGGGTACCTCGAGGTAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTCTGAGGCGGACAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS TCA 90 bp CATGGGATGACCCCAGTGAGGTCCTGGACCCCCAGTAGGGTTGTGTaGCCAACCAGAAGCTCCCGGGTAGCTGTGGCTGAATGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HGMTPVRSWTPSRVV*PTRSSRVAVAECLR
Trigger: CCTGAGGCATTCAGCCACAGCTACCCGGGAGCTTCTGGTTGGTCACACAACCCTACTGGGGGTCCAGGACCTCACTGGGGTCATCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTGGATGGCCCCAAGCTaGTGGTGGGCCACCCATGGG +
Preference number: 5 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPWMAPS*WWATHG
Trigger: CCCATGGGTGGCCCACCACAAGCTTGGGGCCATCCA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGGGGTCCACCTTGCATaGGATGGCCCCAAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSGVHLA*DGPKLV
Trigger: CACAAGCTTGGGGCCATCCAATGCAAGGTGGACCCC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAAGAGCCTGGGGGCTATaGCGGACTCCCATACTGCTA +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSRAWGL*RTPILL
Trigger: TAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTCT...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGAGGTACCCCTTGCATaGGCCCTGAAGGGTGACCCC +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATEVPLA*ALKGDP
Trigger: GGGGTCACCCTTCAGGGCCAATGCAAGGGGTACCTC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGTTAACACTACTGCTTaGGCTGCTGGCACTGATGGA +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSVNTTA*AAGTDG
Trigger: TCCATCAGTGCCAGCAGCCAAAGCAGTAGTGTTAAC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGTCCTGCTCATGTTCTaGCATTTGCCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSVLLMF*HLPRNQ
Trigger: CTGGTTACGAGGCAAATGCAAGAACATGAGCAGGAC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGGACCCCCAGTAGGGTaGTGTGACCAACCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELGPPVG*CDQPEA
Trigger: AGCTTCTGGTTGGTCACACAACCCTACTGGGGGTCC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGGACCCCCAGTAGGGTaGTGTGACCAACCAGAAGCT +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATGPPVG*CDQPEA
Trigger: AGCTTCTGGTTGGTCACACAACCCTACTGGGGGTCC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCCTGCTGTGGATGGCCCCAAGCTaGTGGTGGGCCACCCATGGG +
Preference number: 5 (lower is better)
Translates to: RQCRCVPVITYFNICCLLWMAPS*WWATHG
Trigger: CCCATGGGTGGCCCACCACAAGCTTGGGGCCATCCA...CAGCAGGCAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGTACTGTTTGGGGTCTaGGGCATTATAGAGCTTAGC +
Preference number: 5 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPVLFGV*GIIELS
Trigger: GCTAAGCTCTATAATGCCCAAGACCCCAAACAGTAC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGAGGCGCCCTCAGCGCTaGGGCTCAGTTAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQRRPQR*GSVKMA
Trigger: CGCCATCTTAACTGAGCCCAAGCGCTGAGGGCGCCT...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTATGGCCACCACTTCATaGGTACGCACATCTCGTGCA +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATMATTS*VRTSRA
Trigger: TGCACGAGATGTGCGTACCAATGAAGTGGTGGCCAT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCATTTCGATACTGCAGATaGTCCAGCTCTCTTACTGCA +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSFRYCR*SSSLTA
Trigger: TGCAGTAAGAGAGCTGGACAATCTGCAGTATCGAAA...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTGGCTGGGGTCCACCTaGCATTGGATGGCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPWLGST*HWMAPS
Trigger: GCTTGGGGCCATCCAATGCAAGGTGGACCCCAGCCA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCTTCTGGTCTTCCCCATaGAAGGCTCATAGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPFWSSP*KAHRFV
Trigger: AACAAACCTATGAGCCTTCAATGGGGAAGACCAGAA...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCAGAAAACTGTGCAGGTaGAATTACCCGTACTTTGGG +
Preference number: 5 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPRKLCR*NYPYFG
Trigger: CCCAAAGTACGGGTAATTCAACCTGCACAGTTTTCT...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGTTCCCACAAAGGAATaGGCAGGTGATGCCATGGAA +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELVPTKE*AGDAME
Trigger: TTCCATGGCATCACCTGCCAATTCCTTTGTGGGAAC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGTTCCCACAAAGGAATaGGCAGGTGATGCCATGGAA +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATVPTKE*AGDAME
Trigger: TTCCATGGCATCACCTGCCAATTCCTTTGTGGGAAC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCCTTCTGGTCTTCCCGACCACACATCTACTTaGCCATCATATTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: GHTHHMNFQGPSHPSGLPDHTST*PSYCPS
Trigger: TGAAGGACAATATGATGGCAAAGTAGATGTGTGGTC...GGGAAGACCAGAAGGGTGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGTTAACACTACTGCTTaGGCTGCTGGCACTGATGGA +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELVNTTA*AAGTDG
Trigger: TCCATCAGTGCCAGCAGCCAAAGCAGTAGTGTTAAC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGGGGTCCACCTTGCATaGGATGGCCCCAAGCTTGTG +
Preference number: 5 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVGVHLA*DGPKLV
Trigger: CACAAGCTTGGGGCCATCCAATGCAAGGTGGACCCC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTGGCTGGGGTCCACCTaGCATTGGATGGCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLWLGST*HWMAPS
Trigger: GCTTGGGGCCATCCAATGCAAGGTGGACCCCAGCCA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGGAGGTACCCCTTGCATaGGCCCTGAAGGGTGACCCC +
Preference number: 5 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQEVPLA*ALKGDP
Trigger: GGGGTCACCCTTCAGGGCCAATGCAAGGGGTACCTC...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCAGACATGTGTGACCCATaGGATATTTGTGAAGTGACA +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSDMCDP*DICEVT
Trigger: TGTCACTTCACAAATATCCAATGGGTCACACATGTC...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GTCAGGACACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATAACAGCTCCAGCGGAATaGCCACTCTCAATTATTAAG +
Preference number: 5 (lower is better)
Translates to: VRTRKLHLLTLLRDIPTITAPAE*PLSIIK
Trigger: CTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTGT...TATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTGTCCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTCAGGGCCCCTCTCACCTTGTGTCTCTAGCTaGGATTATTCTTGGACACAT +
Preference number: 5 (lower is better)
Translates to: SSLCCGTYPPYELSGPLSPCVSS*DYSWTH
Trigger: ATGTGTCCAAGAATAATCCAAGCTAGAGACACAAGG...TGAGAGGGGCCCTGAAAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCGCCAACACCATGATCTaGTTCCTCTTCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAANTMI*FLFFFL
Trigger: CAGGAAGAAGAAGAGGAACAAGATCATGGTGTTGGC...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGCCAACACCATGATCTaGTTCCTCTTCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELANTMI*FLFFFL
Trigger: CAGGAAGAAGAAGAGGAACAAGATCATGGTGTTGGC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTTTGTGACGAGATACTaGGGGTGGAGATTGTGGATC +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELFVTRY*GWRLWI
Trigger: GATCCACAATCTCCACCCCAAGTATCTCGTCACAAA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTTTAGAGAGTTCTACCTaGGAGCCCTCTGACTATAGG +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELLESST*EPSDYR
Trigger: CCTATAGTCAGAGGGCTCCAAGGTAGAACTCTCTAA...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGCCCAGGCAATGTATTaGGGGCTCAGAAAAAGCAAA +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATAQAMY*GLRKSK
Trigger: TTTGCTTTTTCTGAGCCCCAAATACATTGCCTGGGC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS TCA 90 bp GAGCTCTGCAATTTCAGGGTCCTTCAGGCTGCCTGCTCTGTTAGTTaGTGGCATCCTGCTGAGCAGTCAGCTGTCTTGATTCTAATTTTA +
Preference number: 5 (lower is better)
Translates to: ELCNFRVLQAACSVS*WHPAEQSAVLILIL
Trigger: TAAAATTAGAATCAAGACAGCTGACTGCTCAGCAGGATGCCATCAACTAACAGAGCAGGCAGCCTGAAGGACCCTGAAATTGCAGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTTTTCGATACTGCAGATaGTCCAGCTCTCTTACTGCA +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATFRYCR*SSSLTA
Trigger: TGCAGTAAGAGAGCTGGACAATCTGCAGTATCGAAA...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGCGGGTCTGTTCCTCCTaGAGCCGTTTCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQRVCSS*SRFRTA
Trigger: AGCTGTTCTGAAACGGCTCAAGGAGGAACAGACCCG...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGAGAGCCTGGGGGCTATaGCGGACTCCCATACTGCTA +
Preference number: 5 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLRAWGL*RTPILL
Trigger: TAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTCT...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS TCA 90 bp CAAGGTCCTGCTCTAAGTTATGACGCCCAAGTAACATTCTTCTCTTaGAGCGACGGCATTCCAGCTCTAGGTATTGTCTTTGACGTCGAA +
Preference number: 5 (lower is better)
Translates to: QGPALSYDAQVTFFS*SDGIPALGIVFDVE
Trigger: TTCGACGTCAAAGACAATACCTAGAGCTGGAATGCCGTCGCTTCAAGAGAAGAATGTTACTTGGGCGTCATAACTTAGAGCAGGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS TCA 90 bp TGTCTTTTGTTTAACTCCTCCCTGACAAGGTCCTGCTCTAAGTTATaGCGCCCAAGTAACATTCTTCTCTTGAAGCGACGGCATTCCAGC +
Preference number: 5 (lower is better)
Translates to: CLLFNSSLTRSCSKL*RPSNILLLKRRHSS
Trigger: GCTGGAATGCCGTCGCTTCAAGAGAAGAATGTTACTTGGGCGTCATAACTTAGAGCAGGACCTTGTCAGGGAGGAGTTAAACAAAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CACGTAAGCTTCATCTCCTCACTCTGCTGCGGGACATACCCACCATATGAACTTGACCACACATCTACTTaGCCATCATATTGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: HVSFISSLCCGTYPPYELDHTST*PSYCPS
Trigger: TGAAGGACAATATGATGGCAAAGTAGATGTGTGGTC...AAGTTCATATGGTGGGTATGTCCCGCAGCAGAGTGAGGAGATGAAGCTTACGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTACGGGTCTGTTCCTCCTaGAGCCGTTTCAGAACAGCT +
Preference number: 5 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLRVCSS*SRFRTA
Trigger: AGCTGTTCTGAAACGGCTCAAGGAGGAACAGACCCG...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTCAAGTGCTGAACACTTaGAGTGAAAGAAAACTGTGC +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATQVLNT*SERKLC
Trigger: GCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTG...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGGCGGAACTCCAGTTCTaGCATAGATTCATGCTGTCG +
Preference number: 5 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQAELQF*HRFMLS
Trigger: CGACAGCATGAATCTATGCAAGAACTGGAGTTCCGC...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTTCAATCTCTCTGGCTaGACGTTCCAACAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPFNLSG*TFQQAS
Trigger: CGAAGCCTGTTGGAACGTCAAGCCAGAGAGATTGAA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGTGTAGGCAGTTTCTTTaGGCAGACAGCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLCRQFL*ADSSSG
Trigger: TCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACA...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTGTGGCTCATAAGAATTaGGGATATGGGATAAAAAGG +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATVAHKN*GYGIKR
Trigger: CCTTTTTATCCCATATCCCAAATTCTTATGAGCCAC...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GATGATGTCTGTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATTGCCACTATTTACATCCGACCATaGCTTTTGCAAAAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: DDVCRQFLLADSSSGIATIYIRP*LLQKSS
Trigger: GGAACTCTTTTGCAAAAGCAATGGTCGGATGTAAAT...AGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACAGACATCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS TCA 90 bp TCTAATTTTATACTGCTATCCCGATCCTTGGTTCATCTGTATGAATaGAGTCACGTTGGCATAAACTACCTTTCGCCGACAGGTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SNFILLSRSLVHLYE*SHVGINYLSPTGLG
Trigger: CCCCAGACCTGTCGGCGAAAGGTAGTTTATGCCAACGTGACTTCATTCATACAGATGAACCAAGGATCGGGATAGCAGTATAAAATTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS TCA 90 bp ATTCTTCTCTTGAAGCGACGGCATTCCAGCTCTAGGTATTGTCTTTaGCGTCGAAGAAGGTTAGCTTCTTCTTCTGCTTGGAAATGCTGT +
Preference number: 5 (lower is better)
Translates to: ILLLKRRHSSSRYCL*RRRRLASSSAWKCC
Trigger: ACAGCATTTCCAAGCAGAAGAAGAAGCTAACCTTCTTCGACGTCAAAGACAATACCTAGAGCTGGAATGCCGTCGCTTCAAGAGAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 90 bp CAATCTCTCTGGCTTGACGTTCCAACAGGCTTCGTATTCGTTCTGTaGGCTCATTCTGCAAAGCCAACATCTCTTCTTCAATCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: QSLWLDVPTGFVFVL*AHSAKPTSLLQSFV
Trigger: AACAAAAGATTGAAGAAGAGATGTTGGCTTTGCAGAATGAGCGCACAGAACGAATACGAAGCCTGTTGGAACGTCAAGCCAGAGAGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCCTTATAGCCAGACATTaGTTCTCTAAGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILLIARH*FSKLRV
Trigger: GACTCTGAGCTTAGAGAACAAATGTCTGGCTATAAG...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGATCCAAACGCAGGGCTaGTGTGGAGAGCATTTCATT +
Preference number: 5 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQIQTQG*CGEHFI
Trigger: AATGAAATGCTCTCCACACAAGCCCTGCGTTTGGAT...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCGACATGTGTGACCCATaGGATATTTGTGAAGTGACA +
Preference number: 5 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILDMCDP*DICEVT
Trigger: TGTCACTTCACAAATATCCAATGGGTCACACATGTC...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TTTCACTCACAAGTGCTGAACACTTTGAGTGAAAGAAAACTGTGCAGGTTGAATTGTAGGCAGTTTCTTTaGGCAGACAGCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: FHSQVLNTLSERKLCRLNCRQFL*ADSSSG
Trigger: TCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTACA...ATTCAACCTGCACAGTTTTCTTTCACTCAAAGTGTTCAGCACTTGTGAGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGTACTGTTTGGGGTCTaGGGCATTATAGAGCTTAGC +
Preference number: 5 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVVLFGV*GIIELS
Trigger: GCTAAGCTCTATAATGCCCAAGACCCCAAACAGTAC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CACATTTGGAATGGGAACCAAAAGAGAGCTGTCTGGCAATACACCAGGACAGCCTTTTTCTTATCATCTTaGCAGAGGAATCACCATCAG +
Preference number: 5 (lower is better)
Translates to: HIWNGNQKRAVWQYTRTAFFLSS*QRNHHQ
Trigger: CTGATGGTGATTCCTCTGCAAAGATGATAAGAAAAA...GGCTGTCCTGGTGTATTGCCAGACAGCTCTCTTTTGGTTCCCATTCCAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 90 bp TGGCATCCTGCTGAGCAGTCAGCTGTCTTGATTCTAATTTTATACTaGTATCCCGATCCTTGGTTCATCTGTATGAATGAAGTCACGTTG +
Preference number: 5 (lower is better)
Translates to: WHPAEQSAVLILILY*YPDPWFICMNEVTL
Trigger: CAACGTGACTTCATTCATACAGATGAACCAAGGATCGGGATAGCAGTATAAAATTAGAATCAAGACAGCTGACTGCTCAGCAGGATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS CCA 90 bp TCCTCTGGTTTTAAATGGATAACAGAACTGTTAGACATCACTGTGTaGTCTCCCTCCATCATGTCTAGCTCACTCTTGTCATCTGAGACA +
Preference number: 5 (lower is better)
Translates to: SSGFKWITELLDITV*SPSIMSSSLLSSET
Trigger: TGTCTCAGATGACAAGAGTGAGCTAGACATGATGGAGGGAGACCACACAGTGATGTCTAACAGTTCTGTTATCCATTTAAAACCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000577583.1
CDS-3UTR CAA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAATGGCCACCACTTCATaGGTACGCACATCTCGTGCA +
Preference number: 5 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPMATTS*VRTSRA
Trigger: TGCACGAGATGTGCGTACCAATGAAGTGGTGGCCAT...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAATCCAAACGCAGGGCTaGTGTGGAGAGCATTTCATT +
Preference number: 5 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLIQTQG*CGEHFI
Trigger: AATGAAATGCTCTCCACACAAGCCCTGCGTTTGGAT...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTATTTGTGACGAGATACTaGGGGTGGAGATTGTGGATC +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILFVTRY*GWRLWI
Trigger: GATCCACAATCTCCACCCCAAGTATCTCGTCACAAA...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTGTCCTGCTCATGTTCTaGCATTTGCCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVVLLMF*HLPRNQ
Trigger: CTGGTTACGAGGCAAATGCAAGAACATGAGCAGGAC...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCCAGTTGCTTTTGATGTaGTCGCCTCATTCGCTTATA +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPQLLLM*SPHSLI
Trigger: TATAAGCGAATGAGGCGACAACATCAAAAGCAACTG...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp ACTGGTGAGGCAATGCAGGTGTGTACCAGTAATAACTTATTTCAACATATGCTGCAGTTCTTTCTTCTGTaGGGCCTGAATATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TGEAMQVCTSNNLFQHMLQFFLL*GLNMLL
Trigger: CAGCAACATATTCAGGCCCAACAGAAGAAAGAACTG...CAGCATATGTTGAAATAAGTTATTACTGGTACACACCTGCATTGCCTCACCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCTGCTACGTTCTATTTTaGCAGTGTTCAGAAAAATCC +
Preference number: 5 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILCYVLF*QCSEKS
Trigger: GGATTTTTCTGAACACTGCAAAAATAGAACGTAGCA...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTATTCTGGTCTTCCCCATaGAAGGCTCATAGGTTTGTT +
Preference number: 5 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLFWSSP*KAHRFV
Trigger: AACAAACCTATGAGCCTTCAATGGGGAAGACCAGAA...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TCACCCTTCTGGTCTTCCCCATTGAAGGCTCATAGGTTTGTTAATGCAATCCTCACTGACTTTTTAGCATaGGGTTCATCCTTCATTGTA +
Preference number: 5 (lower is better)
Translates to: SPFWSSPLKAHRFVNAILTDFLA*GSSFIV
Trigger: TACAATGAAGGATGAACCCAATGCTAAAAAGTCAGT...GAGGATTGCATTAACAAACCTATGAGCCTTCAATGGGGAAGACCAGAAGGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATTCTTCAAGACAACTaGGAAGGGAGCAGGACAATA +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPILQDN*EGSRTI
Trigger: TATTGTCCTGCTCCCTTCCAAGTTGTCTTGAAGAAT...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAAGGACAGCAGCACATTaGGAATGGGAACCAAAAGAG +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILRTAAH*EWEPKE
Trigger: CTCTTTTGGTTCCCATTCCAAATGTGCTGCTGTCCT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp GCTACTACAGGTGTGCATTCATCGCTCAATGGTCTACTCAGAAATGATAAGGTTGTTCTGAAAGCGAAATaGCTCATAGTAACCCATCCA +
Preference number: 5 (lower is better)
Translates to: ATTGVHSSLNGLLRNDKVVLKAK*LIVTHP
Trigger: TGGATGGGTTACTATGAGCAATTTCGCTTTCAGAAC...AACCTTATCATTTCTGAGTAGACCATTGAGCGATGAATGCACACCTGTAGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp AAATCTACAGTGGTGATGAAGATTAGTCAGCAGCTGGTAAAGTCATTGGCTCAGTTCTCTGGATCTTCTTaGAAGAAGAGCTCTGCAATT +
Preference number: 5 (lower is better)
Translates to: KSTVVMKISQQLVKSLAQFSGSS*KKSSAI
Trigger: AATTGCAGAGCTCTTCTTCAAAGAAGATCCAGAGAA...CTGAGCCAATGACTTTACCAGCTGCTGACTAATCTTCATCACCACTGTAGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCAAAGCTCTCGATCATGTaGTGCCTCAGCTTGCATCTT +
Preference number: 5 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPKLSIM*CLSLHL
Trigger: AAGATGCAAGCTGAGGCACAACATGATCGAGAGCTT...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAAAATTTCAATCTCTCTGGCTaGACGTTCCAACAGGCTTCG +
Preference number: 5 (lower is better)
Translates to: ENISQHDFKGNYRNSAENFNLSG*TFQQAS
Trigger: CGAAGCCTGTTGGAACGTCAAGCCAGAGAGATTGAA...ATTTTCTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAACAGCTCCAGCGGAATaGCCACTCTCAATTATTAAG +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILTAPAE*PLSIIK
Trigger: CTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTGT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGAGTGGCCATTTCCTGTaGATTTTACAGTTCAGGAGA +
Preference number: 5 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQSGHFL*ILQFRR
Trigger: TCTCCTGAACTGTAAAATCAACAGGAAATGGCCACT...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAATGACAGCCCAAGTTTaGACATTGCTCTTGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILMTAQV*TLLLEK
Trigger: CTTCTCCAAGAGCAATGTCAAAACTTGGGCTGTCAT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCCGACCATTGCTTTaGCAAAAGAGTTCCCTAAAA +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPIRPLL*QKSSLK
Trigger: TTTTAGGGAACTCTTTTGCAAAAGCAATGGTCGGAT...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTACTGTGAGCGTCTGTTaGGTCCAAAAATCGAGAGGA +
Preference number: 5 (lower is better)
Translates to: SESACSFSRISQNPSNFSTVSVC*VQKSRG
Trigger: TCCTCTCGATTTTTGGACCAAACAGACGCTCACAGT...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 90 bp GTCAGCAAGTTTCACCTGGCCTGGTTCTGTCAGAAGGATATTTCCTaGTTTGATATCTCTAGGTTTAGGGAATACAGAAAATTACTTAAC +
Preference number: 5 (lower is better)
Translates to: VSKFHLAWFCQKDIS*FDISRFREYRKLLN
Trigger: GTTAAGTAATTTTCTGTATTCCCTAAACCTAGAGATATCAAAGCAGGAAATATCCTTCTGACAGAACCAGGCCAGGTGAAACTTGCTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577583.1
CDS-3UTR CAA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGAAGTAACATTCTTCTCTaGAAGCGACGGCATTCCAGC +
Preference number: 5 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRSNILL*KRRHSS
Trigger: GCTGGAATGCCGTCGCTTCAAGAGAAGAATGTTACT...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp CATAGGTTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCTGCTACGTTCTATTTTaGCAGTGTTCAGAAAAATCC +
Preference number: 5 (lower is better)
Translates to: HRFVNAILTQLVISLSTPCYVLF*QCSEKS
Trigger: GGATTTTTCTGAACACTGCAAAAATAGAACGTAGCA...GGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAACCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp AGGAGGAAAACATTAGTCAACATGACTTTAAAGGGAACTACCGGAATTCAGCAGCCTTTCTTGGCTGTTTaGATCCTCAGCAAAGTATAT +
Preference number: 5 (lower is better)
Translates to: RRKTLVNMTLKGTTGIQQPFLAV*ILSKVY
Trigger: ATATACTTTGCTGAGGATCAAAACAGCCAAGAAAGG...CTGCTGAATTCCGGTAGTTCCCTTTAAAGTCATGTTGACTAATGTTTTCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGCAGTAATTCCTTTCTaGGCTGTTTTGATCCTCAGC +
Preference number: 5 (lower is better)
Translates to: SESACSFSRISQNPSNFSAVIPF*AVLILS
Trigger: GCTGAGGATCAAAACAGCCAAGAAAGGAATTACTGC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TCAGAAAGTGCTTGCTCTTTCTCTAGGATATCTCAAAACCCTTCCAATTTTTCTGGGGCAAATCTCTACTaGAATAGTAGTGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: SESACSFSRISQNPSNFSGANLY*NSSGSE
Trigger: TTCTGAGCCACTACTATTCAAGTAGAGATTTGCCCC...AGAAAAATTGGAAGGGTTTTGAGATATCCTAGAGAAAGAGCAAGCACTTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAAGAAATGCATTTCCCTaGTCTATGTTCATCAGCCTT +
Preference number: 5 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLRNAFP*SMFISL
Trigger: AAGGCTGATGAACATAGACAAGGGAAATGCATTTCT...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp AATTTCCCCAAAAACAAACAAACCCGGCAGCCAAGTACTATGACATCCCAATTAAAGACCACAAGTTCTTaGTCCACTATGAAAACCCTA +
Preference number: 5 (lower is better)
Translates to: NFPKNKQTRQPSTMTSQLKTTSS*STMKTL
Trigger: TAGGGTTTTCATAGTGGACAAAGAACTTGTGGTCTT...TAATTGGGATGTCATAGTACTTGGCTGCCGGGTTTGTTTGTTTTTGGGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp ATATGGCATCAAACACCTCCGGCATTTGATTTGTATTGGCTATATGTCTTTGTTCAGTTGCTTTTGATGTaGTCGCCTCATTCGCTTATA +
Preference number: 5 (lower is better)
Translates to: IWHQTPPAFDLYWLYVFVQLLLM*SPHSLI
Trigger: TATAAGCGAATGAGGCGACAACATCAAAAGCAACTG...AACAAAGACATATAGCCAATACAAATCAAATGCCGGAGGTGTTTGATGCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACAGTTCTTTCTTCTGTaGGGCCTGAATATGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRQFFLL*GLNMLL
Trigger: CAGCAACATATTCAGGCCCAACAGAAGAAAGAACTG...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAAGCTTCTTCTTCTGCTaGGAAATGCTGTATATTCTC +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILSFFFC*EMLYIL
Trigger: GAGAATATACAGCATTTCCAAGCAGAAGAAGAAGCT...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS TCA 90 bp TGTTTCTTGATAAGTTTCTCCATTTCTGCAGCAAAATTGTTACGCTaGGTTTCAAGATCTTTGTCTAATCTGAGGCGATGTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: CFLISFSISAAKLLR*VSRSLSNLRRCSSI
Trigger: GATGGATGAACATCGCCTCAGATTAGACAAAGATCTTGAAACTCAGCGTAACAATTTTGCTGCAGAAATGGAGAAACTTATCAAGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000577583.1
CDS-3UTR CAA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATTCTCTGGATCTTCTTaGAAGAAGAGCTCTGCAATT +
Preference number: 5 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPFSGSS*KKSSAI
Trigger: AATTGCAGAGCTCTTCTTCAAAGAAGATCCAGAGAA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACTTATAGCCAGACATTaGTTCTCTAAGCTCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GIWDKKALDLFRNFLGYRLIARH*FSKLRV
Trigger: GACTCTGAGCTTAGAGAACAAATGTCTGGCTATAAG...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS-3UTR CAA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATATTCTCCTTCTGCTTaGAAAGCCACTCCTGTTTTT +
Preference number: 5 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPYSPSA*KATPVF
Trigger: AAAAACAGGAGTGGCTTTCAAAGCAGAAGGAGAATA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TTTGTTAATGCAATCCTCACACAACTTGTGATCTCCTTAAGTACCCCCATCTTAGGTTTGAAAGAGTTTTaGTATGCAAAAGTGATCTGC +
Preference number: 5 (lower is better)
Translates to: FVNAILTQLVISLSTPILGLKEF*YAKVIC
Trigger: GCAGATCACTTTTGCATACAAAAACTCTTTCAAACC...TAAGATGGGGGTACTTAAGGAGATCACAAGTTGTGTGAGGATTGCATTAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp TGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGACACCCATTACAAATTATCAGATaGGAACAGTCCGGGGAAGTT +
Preference number: 5 (lower is better)
Translates to: WDKKALDLFRNFLGYRHPLQIIR*EQSGEV
Trigger: AACTTCCCCGGACTGTTCCAATCTGATAATTTGTAA...TGGGTGTCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS-3UTR CAA 90 bp GGGATATGGGATAAAAAGGCTTTAGATCTTTTCAGAAACTTCTTAGGATACAGAGAAAGGGAGGTTAAATaGGGTAATGACAAAAGAACA +
Preference number: 5 (lower is better)
Translates to: GIWDKKALDLFRNFLGYREREVK*GNDKRT
Trigger: TGTTCTTTTGTCATTACCCAATTTAACCTCCCTTTC...TCTGTATCCTAAGAAGTTTCTGAAAAGATCTAAAGCCTTTTTATCCCATATCCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 72 bp GTCCCCCGGGGCCGGGAGGCCTCAGATGTTCGCGAGTaGCTAGTGCTTTCGGCCCGCGAAGGGCGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VPRGREASDVRE*LVLSAREGRRA
Trigger: CGCCCTGCGCCCTTCGCGGGCCGAAAGCACTAGGCACTCGCGAACATCTGAGGCCTCCCGGCCCCGGGGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000583121.5
CDS GCA 72 bp GACAGGTCTGGGGCGGAGCAGGCAGGCGCAGCCCCCTaGAGCGCTCCGGTAGCCGCTACCCTGGAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: DRSGAEQAGAAP*SAPVAATLEGE
Trigger: CTCACCCTCCAGGGTAGCGGCTACCGGAGCGCTGCAGGGGGCTGCGCCTGCCTGCTCCGCCCCAGACCTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000587277.1
CDS CCA 72 bp CGAGGAGGCGCCCTCAGCGCTTGGGCTCAGTTAAGATaGCGCGGGGAAGTGCCGGGAGCCGTCTCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: RGGALSAWAQLR*RGEVPGAVSVA
Trigger: GGCGACGGAGACGGCTCCCGGCACTTCCCCGCGCCATCTTAACTGAGCCCAAGCGCTGAGGGCGCCTCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 72 bp GACAGGTCTGGGGCGGAGCAGGCAGGCGCAGCCCCCTaGAGCGCTCCGGTAGCCGCTACCAAAGGGAAGAGA +
Preference number: 6 (lower is better)
Translates to: DRSGAEQAGAAP*SAPVAATKGKR
Trigger: TCTCTTCCCTTTGGTAGCGGCTACCGGAGCGCTGCAGGGGGCTGCGCCTGCCTGCTCCGCCCCAGACCTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583121.5
CDS CCA 72 bp GGGTCCACCTTGCATTGGATGGCCCCAAGCTTGTGGTaGGCCACCCATGGGATGACCCCAGTGAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GSTLHWMAPSLW*ATHGMTPVRSW
Trigger: CCAGGACCTCACTGGGGTCATCCCATGGGTGGCCCACCACAAGCTTGGGGCCATCCAATGCAAGGTGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS TCA 72 bp ACCCCAGTGAGGTCCTGGACCCCCAGTAGGGTTGTGTaGCCAACCAGAAGCTCCCGGGTAGCTGTGGCTGAA +
Preference number: 6 (lower is better)
Translates to: TPVRSWTPSRVV*PTRSSRVAVAE
Trigger: TTCAGCCACAGCTACCCGGGAGCTTCTGGTTGGTCACACAACCCTACTGGGGGTCCAGGACCTCACTGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS GCA 72 bp GCCTCAGAGCCTGGGGGCTATTGCGGACTCCCATACTaGTACCTCGAGGTACCCCTTGCATTGGCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: ASEPGGYCGLPY*YLEVPLALALK
Trigger: CTTCAGGGCCAATGCAAGGGGTACCTCGAGGTAGCAGTATGGGAGTCCGCAATAGCCCCCAGGCTCTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS GCA 72 bp CCCAGGCTGGAATGCACTGGCACGAATTCAGCTCCCTaGAGCATGGACCTCCCAGGTTCCAGTGATCTTCCC +
Preference number: 6 (lower is better)
Translates to: PRLECTGTNSAP*SMDLPGSSDLP
Trigger: GGGAAGATCACTGGAACCTGGGAGGTCCATGCTGCAGGGAGCTGAATTCGTGCCAGTGCATTCCAGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577583.1
CDS GCA 72 bp ATTTGTGAAGTGACACTCGTGCTTCTGCTCATGCCCTaGTCCGTCCGTCCCCCAGAAGCTGTCCGCCTCAGA +
Preference number: 6 (lower is better)
Translates to: ICEVTLVLLLMP*SVRPPEAVRLR
Trigger: TCTGAGGCGGACAGCTTCTGGGGGACGGACGGAGCAGGGCATGAGCAGAAGCACGAGTGTCACTTCACAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS CCA 72 bp ACGGCGTTCCCACAAAGGAATTGGCAGGTGATGCCATaGAAGCAGAGCCAAAGTCAGCAAGTTTCACCTGGC +
Preference number: 6 (lower is better)
Translates to: TAFPQRNWQVMP*KQSQSQQVSPG
Trigger: GCCAGGTGAAACTTGCTGACTTTGGCTCTGCTTCCATGGCATCACCTGCCAATTCCTTTGTGGGAACGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000577583.1
CDS GCA 72 bp CTGCAACCTCCACCTTCCAAGTTACAGGGATTCTCCTaGCTCACCCTCTTGTGTAGCTGGGATGACAGTTGT +
Preference number: 6 (lower is better)
Translates to: LQPPPSKLQGFS*LTLLCSWDDSC
Trigger: ACAACTGTCATCCCAGCTACACAAGAGGGTGAGGCAGGAGAATCCCTGTAACTTGGAAGGTGGAGGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577583.1
CDS TCA 72 bp AATTTCAGGGTCCTTCAGGCTGCCTGCTCTGTTAGTTaGTGGCATCCTGCTGAGCAGTCAGCTGTCTTGATT +
Preference number: 6 (lower is better)
Translates to: NFRVLQAACSVS*WHPAEQSAVLI
Trigger: AATCAAGACAGCTGACTGCTCAGCAGGATGCCATCAACTAACAGAGCAGGCAGCCTGAAGGACCCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS TCA 72 bp TATAAGACATGTGTGACCCATTGGATATTTGTGAAGTaGCACTCGTGCTTCTGCTCATGCCCTGCTCCGTCC +
Preference number: 6 (lower is better)
Translates to: YKTCVTHWIFVK*HSCFCSCPAPS
Trigger: GGACGGAGCAGGGCATGAGCAGAAGCACGAGTGTCACTTCACAAATATCCAATGGGTCACACATGTCTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS GCA 72 bp TGGCTTGACGTTCCAACAGGCTTCGTATTCGTTCTGTaGGCTCATTCTGCAAAGCCAACATCTCTTCTTCAA +
Preference number: 6 (lower is better)
Translates to: WLDVPTGFVFVL*AHSAKPTSLLQ
Trigger: TTGAAGAAGAGATGTTGGCTTTGCAGAATGAGCGCACAGAACGAATACGAAGCCTGTTGGAACGTCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS CAA 72 bp TCAGCCAAGATAGCTAATTTCCGGGTCTGTTCCTCCTaGAGCCGTTTCAGAACAGCTTTGTGCTCACTCTTT +
Preference number: 6 (lower is better)
Translates to: SAKIANFRVCSS*SRFRTALCSLF
Trigger: AAAGAGTGAGCACAAAGCTGTTCTGAAACGGCTCAAGGAGGAACAGACCCGGAAATTAGCTATCTTGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000578653.1
CDS TCA 72 bp ATACTGCTATCCCGATCCTTGGTTCATCTGTATGAATaGAGTCACGTTGGCATAAACTACCTTTCGCCGACA +
Preference number: 6 (lower is better)
Translates to: ILLSRSLVHLYE*SHVGINYLSPT
Trigger: TGTCGGCGAAAGGTAGTTTATGCCAACGTGACTTCATTCATACAGATGAACCAAGGATCGGGATAGCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS TCA 72 bp CCGTATAGTAGCAAAGTGTTCTCGATTACGATAGTGTaGTTTGTGACGAGATACTTGGGGTGGAGATTGTGG +
Preference number: 6 (lower is better)
Translates to: PYSSKVFSITIV*FVTRYLGWRLW
Trigger: CCACAATCTCCACCCCAAGTATCTCGTCACAAATCACACTATCGTAATCGAGAACACTTTGCTACTATACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000577583.1
CDS TCA 72 bp GCTCTAAGTTATGACGCCCAAGTAACATTCTTCTCTTaGAGCGACGGCATTCCAGCTCTAGGTATTGTCTTT +
Preference number: 6 (lower is better)
Translates to: ALSYDAQVTFFS*SDGIPALGIVF
Trigger: AAAGACAATACCTAGAGCTGGAATGCCGTCGCTTCAAGAGAAGAATGTTACTTGGGCGTCATAACTTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261716.8
CDS GCA 72 bp TCCAACAGGCTTCGTATTCGTTCTGTGCGCTCATTCTaGAAAGCCAACATCTCTTCTTCAATCTTTTGTTCT +
Preference number: 6 (lower is better)
Translates to: SNRLRIRSVRSF*KANISSSIFCS
Trigger: AGAACAAAAGATTGAAGAAGAGATGTTGGCTTTGCAGAATGAGCGCACAGAACGAATACGAAGCCTGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS TCA 72 bp TTTTATACTGCTATCCCGATCCTTGGTTCATCTGTATaGATGAAGTCACGTTGGCATAAACTACCTTTCGCC +
Preference number: 6 (lower is better)
Translates to: FYTAIPILGSSV*MKSRWHKLPFA
Trigger: GGCGAAAGGTAGTTTATGCCAACGTGACTTCATTCATACAGATGAACCAAGGATCGGGATAGCAGTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000583121.5
ENST00000587277.1
CDS GCA 72 bp GGCAGCCTGGTGTTTCTTGATAAGTTTCTCCATTTCTaGAGCAAAATTGTTACGCTGAGTTTCAAGATCTTT +
Preference number: 6 (lower is better)
Translates to: GSLVFLDKFLHF*SKIVTLSFKIF
Trigger: AAAGATCTTGAAACTCAGCGTAACAATTTTGCTGCAGAAATGGAGAAACTTATCAAGAAACACCAGGCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261716.8
ENST00000536202.1
ENST00000577583.1
CDS GCA 72 bp TTTCACCTGGCCTGGTTCTGTCAGAAGGATATTTCCTaGTTTGATATCTCTAGGTTTAGGGAATACAGAAAA +
Preference number: 6 (lower is better)
Translates to: FHLAWFCQKDIS*FDISRFREYRK
Trigger: TTTTCTGTATTCCCTAAACCTAGAGATATCAAAGCAGGAAATATCCTTCTGACAGAACCAGGCCAGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577583.1
CDS CAA 72 bp GTAGGCAGTTTCTTTTGGCAGACAGCTCCAGCGGAATaGCCACTCTCAATTATTAAGTTATGTATAAGACAT +
Preference number: 6 (lower is better)
Translates to: VGSFFWQTAPAE*PLSIIKLCIRH
Trigger: ATGTCTTATACATAACTTAATAATTGAGAGTGGCAATTCCGCTGGAGCTGTCTGCCAAAAGAAACTGCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261716.8
ENST00000536202.1
CDS CAA 90 bp CATGGGAGTATACTGCAAATTATACCATTTAGAGTTGTAAAAATCTaGTCAGTGAAGCTCACGTGGCAAGGTATAGAGCAAGTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: HGSILQIIPFRVVKI*SVKLTWQGIEQVFV
Trigger: CACAAAGACTTGCTCTATACCTTGCCACGTGAGCTTCACTGACAAGATTTTTACAACTCTAAATGGTATAATTTGCAGTATACTCCCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577583.1
CDS CCA 72 bp TTACTATTGTTTCAAACTCAAACTTCCAGTAGAGTTTaGCTTTCGAATTATAGTCATGGGAGTATACTGCAA +
Preference number: 6 (lower is better)
Translates to: LLLFQTQTSSRV*LSNYSHGSILQ
Trigger: TTGCAGTATACTCCCATGACTATAATTCGAAAGCCAAACTCTACTGGAAGTTTGAGTTTGAAACAATAGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577583.1