RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TANGO6 (Homo sapiens)

Ensembl gene IDs: ENSG00000103047

Ensembl transcript IDs: ENST00000261778.2, ENST00000561566.1, ENST00000561856.1, ENST00000561931.1, ENST00000562000.5, ENST00000562491.1, ENST00000564180.1, ENST00000565037.1, ENST00000565852.1, ENST00000568361.5

Found 401 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCCACCAGCCCCATGGACATGCTCAGCGTCTGTGATTCCACGGTaGTCTCTGCCTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATG +
Preference number: 1 (lower is better)
Translates to: QPPAPWTCSASVIPR*SLPDGPGLHRLSAM
Trigger: CATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGACGCTGAGCATGTCCATGGGGCTGGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR GCA 90 bp GCTGAACACATGCCCTCGGAAGGGACCCTGAAGACCCAAGTGACCTaGACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTC +
Preference number: 1 (lower is better)
Translates to: AEHMPSEGTLKTQVT*TIKPPRGSAMLPAL
Trigger: GAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACTTGGGTCTTCAGGGTCCCTTCCGAGGGCATGTGTTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 90 bp CCCATGGACATGCTCAGCGTCTGTGATTCCACGGTGCTCTCTGCCTaGTGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTGCTACA +
Preference number: 1 (lower is better)
Translates to: PMDMLSVCDSTVLSA*WARLAQALCNVAAT
Trigger: TGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGACGCTGAGCATGTCCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR GCA 90 bp GCTCTCTGCCTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTaGTGCTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTGG +
Preference number: 1 (lower is better)
Translates to: ALCLMGQACTGSLQC*CYKVHHLGSLLNVW
Trigger: CCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR GCA 90 bp CTCTGCCTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTGGAGT +
Preference number: 1 (lower is better)
Translates to: LCLMGQACTGSLQCC*YKVHHLGSLLNVWS
Trigger: ACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 90 bp TGTTGCTGCTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTaGAGTCTCAGGACACTGGAACGTTTTGGATTCAGTGGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: CCCYKVHHLGSLLNV*SLRTLERFGFSGLV
Trigger: CACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 90 bp GCTCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTaGATGACCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAGA +
Preference number: 1 (lower is better)
Translates to: APWVEMVMRRSTASS*MTGSGYVLDTFSNR
Trigger: TCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 90 bp GGAGAGAGGGCACAGCTTTGTCCAACCCTGCAAATCCTTTCAGGCTaGCAATTGCCTTCTTCCTTTCCAGCTTCCCCAGAATCCATAATA +
Preference number: 1 (lower is better)
Translates to: GERAQLCPTLQILSG*QLPSSFPASPESII
Trigger: TATTATGGATTCTGGGGAAGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGCCCTCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR CCA 90 bp AGGAGCAGAGGACAGAAGGCAGGATGTAAACTCTCTGGATGCTCGTaGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCAAACAGCA +
Preference number: 1 (lower is better)
Translates to: RSRGQKAGCKLSGCS*FFSPDNQGNSLQTA
Trigger: TGCTGTTTGCAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTTACATCCTGCCTTCTGTCCTCTGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 90 bp CGGGAGCTTGTTAAACGTGTGGAGTCTCAGGACACTGGAACGTTTTaGATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAAC +
Preference number: 1 (lower is better)
Translates to: RELVKRVESQDTGTF*IQWPGVGCVVSIFN
Trigger: GTTAAATATGGAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCTCCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 90 bp TTACCCTTCTTCTCTGGAAGAGTCAACCAGCTTGATTGTCCTTTCTaGGCATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACAC +
Preference number: 1 (lower is better)
Translates to: LPFFSGRVNQLDCPF*ASEPLQLHSFPSRH
Trigger: GTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTCCAGAGAAGAAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 90 bp GTTAAACGTGTGGAGTCTCAGGACACTGGAACGTTTTGGATTCAGTaGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAACCAGCATTCC +
Preference number: 1 (lower is better)
Translates to: VKRVESQDTGTFWIQ*PGVGCVVSIFNQHS
Trigger: GGAATGCTGGTTAAATATGGAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGAGACTCCACACGTTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR TCA 90 bp GTGATAAAATCCTGTGATAAAATTCTGTACCTAGCCCTGCAAAGCTaGGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTG +
Preference number: 1 (lower is better)
Translates to: VIKSCDKILYLALQS*GLIKHLWVGLIKVL
Trigger: CAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGCAGGGCTAGGTACAGAATTTTATCACAGGATTTTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 90 bp CACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCTTaGCAAAGTTATAAAGGTAGTGGTGGCAACTCTCTGAAATTGTCG +
Preference number: 1 (lower is better)
Translates to: HWLEQILCCQMWAFS*QSYKGSGGNSLKLS
Trigger: CGACAATTTCAGAGAGTTGCCACCACTACCTTTATAACTTTGTCAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR TCA 90 bp ATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATAGAGCTAGGTaGCATATGGGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGT +
Preference number: 1 (lower is better)
Translates to: IFLKKNLSLKEYRAR*HMGGQPLLLKFQES
Trigger: ACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACCCATATGTCACCTAGCTCTATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR GCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGGGGCACGGCTCTGGGTaGCTGGCCCTGCCTGCCTCC +
Preference number: 2 (lower is better)
Translates to: VLTTERANMKQPASISFLGHGSG*LALPAS
Trigger: GGAGGCAGGCAGGGCCAGGCACCCAGAGCCGTGCCC...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 90 bp TCAGCGTCTGTGATTCCACGGTGCTCTCTGCCTGATGGGCCAGGCTaGCACAGGCTCTCTGCAATGTTGCTGCTACAAAGTCCACCACCT +
Preference number: 2 (lower is better)
Translates to: SASVIPRCSLPDGPG*HRLSAMLLLQSPPP
Trigger: AGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGACGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR GCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAGGCAGCAGGGCCACCTaGTGGAAGACCTGGGCACGG +
Preference number: 2 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLGSRAT*WKTWAR
Trigger: CCGTGCCCAGGTCTTCCAGCAGGTGGCCCTGCTGCC...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR GCA 90 bp ATGCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGACTGATGGGCCAGGCTTaGACAGGCTCTCTGCAATGT +
Preference number: 2 (lower is better)
Translates to: MLTASVAKAPWVEMVMRRLMGQA*TGSLQC
Trigger: ACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAG...TCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 90 bp TGCTCTCTGCCTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTaGCTGCTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTG +
Preference number: 2 (lower is better)
Translates to: CSLPDGPGLHRLSAM*LLQSPPPRELVKRV
Trigger: CACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CCA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGACCTGCTGGAAGACCTaGGCACGGCTCTGGGTGCCT +
Preference number: 2 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLTCWKT*ARLWVP
Trigger: AGGCACCCAGAGCCGTGCCCAGGTCTTCCAGCAGGT...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR GCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATGAGGGTCAGCCATGCTaGCAGCACTCAAGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDEGQPC*QHSRGS
Trigger: GCTGCCTCTTGAGTGCTGGCAGCATGGCTGACCCTC...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR GCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTCCCGAGGGTCAGCCATaGTGCCAGCACTCAAGAGGC +
Preference number: 2 (lower is better)
Translates to: IRASSTPQFSISTPEDQIPEGQP*CQHSRG
Trigger: GCCTCTTGAGTGCTGGCAGCATGGCTGACCCTCGGG...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATACCTGGGCACGGCTCTaGGTGCCTGGCCCTGCCTGC +
Preference number: 2 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYTWARL*VPGPAC
Trigger: GCAGGCAGGGCCAGGCACCCAGAGCCGTGCCCAGGT...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGCAGGGCCACCTGCTaGAAGACCTGGGCACGGCTC +
Preference number: 2 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSSRATC*KTWARL
Trigger: GAGCCGTGCCCAGGTCTTCCAGCAGGTGGCCCTGCT...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CCA 90 bp GACCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGCCACCAGCCCCATaGACATGCTCAGCGTCTGTG +
Preference number: 2 (lower is better)
Translates to: DRIRVCVGYLLQQRQQLLQPPAP*TCSASV
Trigger: CACAGACGCTGAGCATGTCCATGGGGCTGGTGGCTG...AAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR TCA 90 bp ATGCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGATCACTTGACTTCAACTaGACAGCTCCTCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: MLTASVAKAPWVEMVMRRSLDFN*TAPPSM
Trigger: CATGCTAGGAGGAGCTGTTCAGTTGAAGTCAAGTGA...TCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 90 bp GGCTCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTaGGATGACCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAG +
Preference number: 2 (lower is better)
Translates to: GSMGRDGDAEINSEF*DDRIRVCVGYLLQQ
Trigger: CTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CCA 90 bp ATGCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGAAGCTTGTTAAACGTGTaGAGTCTCAGGACACTGGAA +
Preference number: 2 (lower is better)
Translates to: MLTASVAKAPWVEMVMRRSLLNV*SLRTLE
Trigger: TTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCT...TCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 90 bp GGCTCTCTGCAATGTTGCTGCTACAAAGTCCACCACCTCGGGAGCTaGTTAAACGTGTGGAGTCTCAGGACACTGGAACGTTTTGGATTC +
Preference number: 2 (lower is better)
Translates to: GSLQCCCYKVHHLGS*LNVWSLRTLERFGF
Trigger: GAATCCAAAACGTTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR TCA 90 bp ATGCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGAAACAGCAAAATCACTTaGCTTCAACTGAACAGCTCC +
Preference number: 2 (lower is better)
Translates to: MLTASVAKAPWVEMVMRRNSKIT*LQLNSS
Trigger: GGAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTT...TCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR GCA 90 bp TATTTTCCCTTCCAGATCTTTTCTGTTCAGTGTACTTTGGGCAGCCATGCTGACTTCCACGGTGCTCTCTaGCTGATGGGCCAGGCTTGC +
Preference number: 2 (lower is better)
Translates to: YFPFQIFSVQCTLGSHADFHGAL*LMGQAC
Trigger: GCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAA...GTCAGCATGGCTGCCCAAAGTACACTGAACAGAAAAGATCTGGAAGGGAAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGGAGCTAGGTGACATATaGGTGGCCAACCGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEELGDI*VANRFS
Trigger: GGAGAAGCGGTTGGCCACCCATATGTCACCTAGCTC...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 90 bp CGGAGATCAACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTaGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCA +
Preference number: 2 (lower is better)
Translates to: RRSTASSWMTGSGYV*DTFSNRGNNCFRTA
Trigger: TGCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR TCA 90 bp TTGCTGCTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTGGAGTCTCAGCCAGGAAACACCTCATaGTCCAGGTGTCATCAAATC +
Preference number: 2 (lower is better)
Translates to: LLLQSPPPRELVKRVESQPGNTS*SRCHQI
Trigger: GATTTGATGACACCTGGATCATGAGGTGTTTCCTGG...CTGAGACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR GCA 90 bp CCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGGCTCTCTGCAATGTTaGTGCTACAAAGTCCACCAC +
Preference number: 2 (lower is better)
Translates to: PDQGMCWIPSPTEATTASGSLQC*CYKVHH
Trigger: GTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCC...TGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR GCA 90 bp GATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTTGGACTTGCACAGGCTCTCTaGAATGTTGCTGCTACAAAG +
Preference number: 2 (lower is better)
Translates to: DAEINSEFLDDRIRVCVGLAQAL*NVAATK
Trigger: CTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAG...TCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR TCA 90 bp GAATGGAGAGAGGGCACAGCTTTGTCCAACCCTGCAAATCCTTTCAGGCTGGCAGATTTCTTGGCAAAGTaGCCTTATGTGAGACACACT +
Preference number: 2 (lower is better)
Translates to: EWREGTALSNPANPFRLADFLAK*PYVRHT
Trigger: AGTGTGTCTCACATAAGGTCACTTTGCCAAGAAATC...TGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGCCCTCTCTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR-3UTR GCA 90 bp CCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCATCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTC +
Preference number: 2 (lower is better)
Translates to: PDQGMCWIPSPTEATTASSLQCC*YKVHHL
Trigger: GAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGA...TGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR TCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGGAATATAGAGCTAGGTaGCATATGGGTGGCCAACCG +
Preference number: 2 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLEYRAR*HMGGQP
Trigger: CGGTTGGCCACCCATATGTCACCTAGCTCTATATTC...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CCA 90 bp TCAGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACATTGGATTCAGTGGCCTaGTGTGGGCTGTGTAGTTTC +
Preference number: 2 (lower is better)
Translates to: SGYVLDTFSNRGNNCFRTLDSVA*CGLCSF
Trigger: GAAACTACACAGCCCACACCAGGCCACTGAATCCAA...TGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 90 bp GATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGTCAACCAGCTaGATTGTCCTTTCTGGGCATCAGAGCCTCTTCAACTCCACAGTT +
Preference number: 2 (lower is better)
Translates to: DKYRAYPSSLEESTS*IVLSGHQSLFNSTV
Trigger: AACTGTGGAGTTGAAGAGGCTCTGATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR TCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATAGAAGAATCTCAGCCTaGAAGAATATAGAGCTAGGT +
Preference number: 2 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDRRISA*KNIELG
Trigger: ACCTAGCTCTATATTCTTTCAGGCTGAGATTCTTCT...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR GCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTGTTATCTCTTTTAGCTaGAATCAAAATGCAGCGGCC +
Preference number: 2 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSVISFS*NQNAAA
Trigger: GGCCGCTGCATTTTGATTGCAGCTAAAAGAGATAAC...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CCA 90 bp TTGCCTTCTTCCTTTCCAGCTTCCCCAGAATCCATAATAAGATTTCTTGGCAAAAAGCACTCCCAGGACTaGAAGCAGGGAATCCATCAA +
Preference number: 2 (lower is better)
Translates to: LPSSFPASPESIIRFLGKKHSQD*KQGIHQ
Trigger: TTGATGGATTCCCTGCTTCCAGTCCTGGGAGTGCTT...TTTGCCAAGAAATCTTATTATGGATTCTGGGGAAGCTGGAAAGGAAGAAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR-3UTR TCA 90 bp ACCTTAAACACATCCTCAATGCATCTACTAAGTTCTTCTTCTGTCACCAAAATATACCATGTCACTCTCTaGAAGCTCTGCTGTATTCAA +
Preference number: 2 (lower is better)
Translates to: TLNTSSMHLLSSSSVTKIYHVTL*KLCCIQ
Trigger: TTGAATACAGCAGAGCTTTCAGAGAGTGACATGGTA...TATTTTGGTGACAGAAGAAGAACTTAGTAGATGCATTGAGGATGTGTTTAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR GCA 72 bp GCCCCATGGACATGCTCAGCGTCTGTGATTCCACGGTaGTCTCTGCCTGATGGGCCAGGCTTGCACAGGCTC +
Preference number: 3 (lower is better)
Translates to: APWTCSASVIPR*SLPDGPGLHRL
Trigger: GAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGACGCTGAGCATGTCCATGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR GCA 72 bp ATGCCCTCGGAAGGGACCCTGAAGACCCAAGTGACCTaGACCATAAAACCACCCCGAGGGTCAGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: MPSEGTLKTQVT*TIKPPRGSAML
Trigger: CAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACTTGGGTCTTCAGGGTCCCTTCCGAGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR GCA 72 bp CTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTaGTGCTACAAAGTCCACCACCTCGGGAGCTTGTTA +
Preference number: 3 (lower is better)
Translates to: LMGQACTGSLQC*CYKVHHLGSLL
Trigger: TAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR GCA 72 bp ATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTCGGGAGCTTGTTAAAC +
Preference number: 3 (lower is better)
Translates to: MGQACTGSLQCC*YKVHHLGSLLN
Trigger: GTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CAA 90 bp TCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGAGGCTCTCTGCAATGTaGCTGCTACAAAGTCCACCA +
Preference number: 3 (lower is better)
Translates to: SMGRDGDAEINSEFLDDRRLSAM*LLQSPP
Trigger: TGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCT...CCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CAA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAACTCTGAAATGCCTCTaGAGCAGCCAAGGGTGGCCA +
Preference number: 3 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKTLKCL*SSQGWP
Trigger: TGGCCACCCTTGGCTGCTCAAGAGGCATTTCAGAGT...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR-3UTR CAA 90 bp ATGCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGAGAACAGCAAAATCACTaGACTTCAACTGAACAGCTC +
Preference number: 3 (lower is better)
Translates to: MLTASVAKAPWVEMVMRREQQNH*TSTEQL
Trigger: GAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTTC...TCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 72 bp GCACAGCTTTGTCCAACCCTGCAAATCCTTTCAGGCTaGCAATTGCCTTCTTCCTTTCCAGCTTCCCCAGAA +
Preference number: 3 (lower is better)
Translates to: AQLCPTLQILSG*QLPSSFPASPE
Trigger: TTCTGGGGAAGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR CCA 72 bp GTTAAACGTGTGGAGTCTCAGGACACTGGAACGTTTTaGATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCC +
Preference number: 3 (lower is better)
Translates to: VKRVESQDTGTF*IQWPGVGCVVS
Trigger: GGAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGAGACTCCACACGTTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR TCA 72 bp GATGGCCTCTTTAAAGGGATGCCACCAAGGAAGATCTaGCTCAGAACCATGTCTGTGATCTGGCCAGAGAGA +
Preference number: 3 (lower is better)
Translates to: DGLFKGMPPRKI*LRTMSVIWPER
Trigger: TCTCTCTGGCCAGATCACAGACATGGTTCTGAGTCAGATCTTCCTTGGTGGCATCCCTTTAAAGAGGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 72 bp GTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTaGATGACCGGATCAGGGTATGTGTTGGATACCTTC +
Preference number: 3 (lower is better)
Translates to: VEMVMRRSTASS*MTGSGYVLDTF
Trigger: GAAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CCA 72 bp ATTTTCCCTTCCAGATCTTTTCTGTTCAGTGTACTTTaGGCAGCCATGCTGACGGCCTCAGTGGCAAAGGCT +
Preference number: 3 (lower is better)
Translates to: IFPSRSFLFSVL*AAMLTASVAKA
Trigger: AGCCTTTGCCACTGAGGCCGTCAGCATGGCTGCCCAAAGTACACTGAACAGAAAAGATCTGGAAGGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CAA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAGGCCTCATCAAGGTGTaGACAACAGAGAGGGCTAAT +
Preference number: 3 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKGLIKV*TTERAN
Trigger: ATTAGCCCTCTCTGTTGTCAACACCTTGATGAGGCC...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 72 bp TCCTGTGATAAAATTCTGTACCTAGCCCTGCAAAGCTaGGGACTGATCAAGCATCTCTGGGTTGGCCTCATC +
Preference number: 3 (lower is better)
Translates to: SCDKILYLALQS*GLIKHLWVGLI
Trigger: GATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGCAGGGCTAGGTACAGAATTTTATCACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR GCA 72 bp AGCAGAGGACAGAAGGCAGGATGTAAACTCTCTGGATaGTCGTGGTTCTTTTCTCCTGATAATCAGGGCAAC +
Preference number: 3 (lower is better)
Translates to: SRGQKAGCKLSG*SWFFSPDNQGN
Trigger: GTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTTACATCCTGCCTTCTGTCCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 72 bp GGACAGAAGGCAGGATGTAAACTCTCTGGATGCTCGTaGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTG +
Preference number: 3 (lower is better)
Translates to: GQKAGCKLSGCS*FFSPDNQGNSL
Trigger: CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTTACATCCTGCCTTCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 72 bp GTGGAGTCTCAGGACACTGGAACGTTTTGGATTCAGTaGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAAC +
Preference number: 3 (lower is better)
Translates to: VESQDTGTFWIQ*PGVGCVVSIFN
Trigger: GTTAAATATGGAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGAGACTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CAA 90 bp GATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCAAAATCACTTGACGGACACTGGAACGTTTaGGATTCAGTGGCCTGGTGT +
Preference number: 3 (lower is better)
Translates to: DTFSNRGNNCFRTAKSLDGHWNV*DSVAWC
Trigger: ACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCC...GTCAAGTGATTTTGCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR-3UTR CAA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACGAAGAGTCAACCAGCTaGATTGTCCTTTCTGGGCAT +
Preference number: 3 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHEESTS*IVLSGH
Trigger: ATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTC...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CCA 72 bp TTCTCTGGAAGAGTCAACCAGCTTGATTGTCCTTTCTaGGCATCAGAGCCTCTTCAACTCCACAGTTTTCCA +
Preference number: 3 (lower is better)
Translates to: FSGRVNQLDCPF*ASEPLQLHSFP
Trigger: TGGAAAACTGTGGAGTTGAAGAGGCTCTGATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTCCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 72 bp AAGAAGAATCTCAGCCTGAAAGAATATAGAGCTAGGTaGCATATGGGTGGCCAACCGCTTCTCCTCAAGTTC +
Preference number: 3 (lower is better)
Translates to: KKNLSLKEYRAR*HMGGQPLLLKF
Trigger: GAACTTGAGGAGAAGCGGTTGGCCACCCATATGTCACCTAGCTCTATATTCTTTCAGGCTGAGATTCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR GCA 72 bp TGTGATCCTGTTCATAAGATGGCCTCTTTAAAGGGATaGCACCAAGGAAGATCTGACTCAGAACCATGTCTG +
Preference number: 3 (lower is better)
Translates to: CDPVHKMASLKG*HQGRSDSEPCL
Trigger: CAGACATGGTTCTGAGTCAGATCTTCCTTGGTGGCATCCCTTTAAAGAGGCCATCTTATGAACAGGATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 72 bp GAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCTTaGCAAAGTTATAAAGGTAGTGGTGGCAACTCTCTG +
Preference number: 3 (lower is better)
Translates to: EQILCCQMWAFS*QSYKGSGGNSL
Trigger: CAGAGAGTTGCCACCACTACCTTTATAACTTTGTCAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR-3UTR CAA 90 bp ACATCCTCAATGCATCTACTAAGTTCTTCTTCTGTCACCAAAATAGTTCCTGGTGCTGGAGCAAATACTTaGCTGCCAAATGTGGGCGTT +
Preference number: 3 (lower is better)
Translates to: TSSMHLLSSSSVTKIVPGAGANT*LPNVGV
Trigger: AACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGC...ACCAGGAACTATTTTGGTGACAGAAGAAGAACTTAGTAGATGCATTGAGGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR TCA 72 bp TCACTCTCTGAAAGCTCTGCTGTATTCAAACATCGATaGAGAGGAGCTAACACTGGCTGGAGCAAATACTTT +
Preference number: 3 (lower is better)
Translates to: SLSESSAVFKHR*RGANTGWSKYF
Trigger: AAAGTATTTGCTCCAGCCAGTGTTAGCTCCTCTTCATCGATGTTTGAATACAGCAGAGCTTTCAGAGAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
3UTR CCA 72 bp ATGTTTGTGTATAGATCCTTCAGTCACTCGAGCTTTTaGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCAC +
Preference number: 3 (lower is better)
Translates to: MFVYRSFSHSSF*KLRFGSCGSSH
Trigger: GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCTATACACAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR TCA 72 bp TATAAAGAAATAAAGTGGAGACCACAGTGCTATATCTaGAATTGTTTCAACAGCCCTGGCATTAGGCCACCA +
Preference number: 3 (lower is better)
Translates to: YKEIKWRPQCYI*NCFNSPGIRPP
Trigger: TGGTGGCCTAATGCCAGGGCTGTTGAAACAATTTCAGATATAGCACTGTGGTCTCCACTTTATTTCTTTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAAGCAGGGCCACCTGCTaGAAGACCTGGGCACGGCTC +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQSRATC*KTWARL
Trigger: GAGCCGTGCCCAGGTCTTCCAGCAGGTGGCCCTGCT...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAGGGCACGGCTCTGGGTaGCTGGCCCTGCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKGHGSG*LALPAS
Trigger: GGAGGCAGGCAGGGCCAGGCACCCAGAGCCGTGCCC...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAACAGCTCCCCAAGGTTaGCCAAGCTGCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQTAPQG*PSCWPC
Trigger: ACAGGGCCAGCAGCTTGGCCAACCTTGGGGAGCTGT...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAAGACCGCATGTCTCCTaGGCCCCGCTGCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKRPHVS*APLPTA
Trigger: GGCCGTGGGCAGCGGGGCTCAGGAGACATGCGGTCT...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GGCTCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACACGGTGCTCTCTGCCTaGTGGGCCAGGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: GSMGRDGDAEINSEFLDDTVLSA*WARLAQ
Trigger: CTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGT...GTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAACATGCTCAGCGTCTGTaGTTCCACGGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQHAQRL*FHGALC
Trigger: GCAGAGAGCACCGTGGAATCACAGACGCTGAGCATG...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAACCTGGGCACGGCTCTaGGTGCCTGGCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKTWARL*VPGPAC
Trigger: GCAGGCAGGGCCAGGCACCCAGAGCCGTGCCCAGGT...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp CCTGATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTaGCTGCTACAAAGTCCACCACCTCGGGAGCTTGTT +
Preference number: 4 (lower is better)
Translates to: PDGPGLHRLSAM*LLQSPPPRELV
Trigger: AACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAATTGGCACAGACCTGCTaGGATATCCCCAAAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQLAQTC*DIPKVV
Trigger: CACCACTTTGGGGATATCGCAGCAGGTCTGTGCCAA...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACTGCTCCACCCGGCCCTaGTCAGAGGATACCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDCSTRP*SEDTFW
Trigger: CCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCA...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCTCGGGCCGCCATGACTaGAGTGTAACACCACGCTCG +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACSGRHD*SVTPRS
Trigger: CGAGCGTGGTGTTACACTCCAGTCATGGCGGCCCGA...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCACATCTGTGCAGGACTaGGGTGGTCCTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACTSVQD*GGPPWR
Trigger: CCTCCAGGGAGGACCACCCCAGTCCTGCACAGATGT...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TCAGGACACTGGAACGTTTTGGATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCCAGCCACCAGCCCCATaGACATGCTCAGCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SGHWNVLDSVAWCGLCSFQPPAP*TCSASV
Trigger: CACAGACGCTGAGCATGTCCATGGGGCTGGTGGCTG...GAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 72 bp GTGATTCCACGGTGCTCTCTGCCTGATGGGCCAGGCTaGCACAGGCTCTCTGCAATGTTGCTGCTACAAAGT +
Preference number: 4 (lower is better)
Translates to: VIPRCSLPDGPG*HRLSAMLLLQS
Trigger: ACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACAAGCTGCTGGCCCTGTaGGCACCATCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDKLLAL*APSGSL
Trigger: GAGAGATCCTGATGGTGCTCACAGGGCCAGCAGCTT...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACATCACTTCCACCAGCTaGTCCCGCACCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDITSTS*SRTCSF
Trigger: GAAGGAGCAGGTGCGGGAGCAGCTGGTGGAAGTGAT...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCTTCCACGGTGCTCTCTaGCTGATGGGCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFFHGAL*LMGQAC
Trigger: GCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAA...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GCTGACGGCCTCAGTGGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGATCTCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTC +
Preference number: 4 (lower is better)
Translates to: ADGLSGKGSMGRDGDAEISLQCC*YKVHHL
Trigger: GAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGA...GATCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCCACTGAGGCCGTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGCCAAACCGCATTCCTaGCAGTGGGACAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACAKPHS*QWDSKS
Trigger: GGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGCAGCCACCAGCCCCATaGACATGCTCAGCGTCTGTG +
Preference number: 4 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLQPPAP*TCSASV
Trigger: CACAGACGCTGAGCATGTCCATGGGGCTGGTGGCTG...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGCAAAGGCTCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGCTGTTCAGTGTACTTTaGGCAGCCATGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: GKGSMGRDGDAEINSEFLLFSVL*AAMLTA
Trigger: GGCCGTCAGCATGGCTGCCCAAAGTACACTGAACAG...CAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGAGCCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAACCCCTCAGGAAGGTATaGATCAAAGGTTCTCGGTAC +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQPLRKV*IKGSRY
Trigger: GTACCGAGAACCTTTGATCCATACCTTCCTGAGGGG...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGCCTCCTCCACGTCCTTaGAGCCAGGTCTACGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLPPPRP*SQVYGR
Trigger: CCTGCCGTAGACCTGGCTCCAAGGACGTGGAGGAGG...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACCTCCAACACCAGGCATaGGATAGGGGCAGATACCCA +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDLQHQA*DRGRYP
Trigger: TGGGTATCTGCCCCTATCTCATGCCTGGTGTTGGAG...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAAAACACACCACGTCTTaGACGACGGCACCAAATTCA +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQKHTTS*TTAPNS
Trigger: TGAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTT...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAATGTTCAAGGTGGCTATaGGCTACATCAGTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQCSRWL*ATSVGL
Trigger: AAGACCCACTGATGTAGCTCATAGCCACCTTGAACA...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAAGCAGGGCAACCCCCTaGATTGCAGATAGATATACA +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQSRATP*IADRYT
Trigger: TGTATATCTATCTGCAATTCAGGGGGTTGCCCTGCT...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGCTCAGGATAGACGTCTaGCAGCAGGGCAACCCCCTG +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLLRIDV*QQGNPL
Trigger: CAGGGGGTTGCCCTGCTGTCAGACGTCTATCCTGAG...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTGCTACAAAGTCCACCACCTCGCCAGGAAACACCTCATaGTCCAGGTGTCATCAAATC +
Preference number: 4 (lower is better)
Translates to: ARLAQALCNVAATKSTTSPGNTS*SRCHQI
Trigger: GATTTGATGACACCTGGATCATGAGGTGTTTCCTGG...CGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAAGCTGCTCCCGCACCTaGTCCTTCCAAAATGCCCCG +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLSCSRT*SFQNAP
Trigger: CGGGGCATTTTGGAAGGAGCAGGTGCGGGAGCAGCT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGATCACTGATGGGCCAGGCTTaGACAGGCTCTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: WVEMVMRRSTASSWMTGSLMGQA*TGSLQC
Trigger: ACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAG...TGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGGCAGCAGGGCCACCTaGTGGAAGACCTGGGCACGG +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYGSRAT*WKTWAR
Trigger: CCGTGCCCAGGTCTTCCAGCAGGTGGCCCTGCTGCC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGCCGCATTCCTGGCAGTaGGACAGCAAGTCCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEPHSWQ*DSKSPR
Trigger: TCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGG...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTTGGAGTGGCAAAGGCTCCATaGGTAGAGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: DAEINSEFLDDRIRVCVGVAKAP*VEMVMR
Trigger: CCGCATCACCATCTCTACCCATGGAGCCTTTGCCAC...TCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGGGTTGGCCAAGCTGCTaGCCCTGTGAGCACCATCAG +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLGWPSC*PCEHHQ
Trigger: CTGATGGTGCTCACAGGGCCAGCAGCTTGGCCAACC...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAACTTCACCATCTGTTTTaGCCACAGCAATCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQLHHLF*PQQSGK
Trigger: CTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAG...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAACTGGGCATGGAGCTTaGCCACGTCATCGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLTGHGA*PRHRAP
Trigger: TGGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTAGGGCCAACTGGGCATaGAGCTTGGCCACGTCATCG +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQIRANWA*SLATSS
Trigger: CGATGACGTGGCCAAGCTCCATGCCCAGTTGGCCCT...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGACCTGCTGGAAGACCTaGGCACGGCTCTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLTCWKT*ARLWVP
Trigger: AGGCACCCAGAGCCGTGCCCAGGTCTTCCAGCAGGT...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAATTGAGGGTCATAAGCTaGCAAAAGAACCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQLRVIS*QKNLLE
Trigger: CTCCAAGAGGTTCTTTTGTCAGCTTATGACCCTCAA...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCCTAGCCCTGCAAAGCTaGGGACTGATCAAGCATCTC +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACLALQS*GLIKHL
Trigger: GAGATGCTTGATCAGTCCTCAGCTTTGCAGGGCTAG...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTGAGGGTCAGCCATGCTaGCAGCACTCAAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSEGQPC*QHSRGS
Trigger: GCTGCCTCTTGAGTGCTGGCAGCATGGCTGACCCTC...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGAAGGGCCTTGCAGCTaGTGTACAGTCTTCGAGTTG +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACEGPCS*CTVFEL
Trigger: CAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCGCGATATCCCCAAAGTaGTGGCAGAAGATCAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCAISPK*WQKIKL
Trigger: GAGCTTGATCTTCTGCCACCACTTTGGGGATATCGC...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCGGGCAGAATCCCAGTTaGCACAGACCTGCTGCGATA +
Preference number: 4 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFGQNPS*HRPAAI
Trigger: TATCGCAGCAGGTCTGTGCCAACTGGGATTCTGCCC...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGTGGGGTGGTCCTCCCTaGAGGATAAGCAGTTCCCGG +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLWGGPP*RISSSR
Trigger: CCGGGAACTGCTTATCCTCCAGGGAGGACCACCCCA...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCGGAGCTAACACTGGCTaGAGCAAATACTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCGANTG*SKYFAA
Trigger: GGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTCC...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACAGCAGCTTCCGCTCTTaGCCTTCCACAAGAAGAGTC +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDSSFRS*PSTRRV
Trigger: GACTCTTCTTGTGGAAGGCCAAGAGCGGAAGCTGCT...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGGTGGCAAAGGCTCCATaGGTAGAGATGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLVAKAP*VEMVMR
Trigger: CCGCATCACCATCTCTACCCATGGAGCCTTTGCCAC...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAACTTGGAGCTGTTCTGTaGTTACGCTTCCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQLGAVL*LRFQIS
Trigger: AGAAATCTGGAAGCGTAACCACAGAACAGCTCCAAG...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCCTCTGCTCTATCCAGTaGGAAAGAGTACGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACLCSIQ*ERVRRA
Trigger: TGCCCTGCGTACTCTTTCCCACTGGATAGAGCAGAG...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGTCTTCTAGGGCCAACTaGGCATGGAGCTTGGCCACG +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLSSRAN*AWSLAT
Trigger: CGTGGCCAAGCTCCATGCCCAGTTGGCCCTAGAAGA...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCCAAGCATCTCTGGGTTaGCCTCATCAAGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCQASLG*PHQGVD
Trigger: GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTG...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAACCATGTCTGTGATCTaGCCAGAGAGAAATATCCTG +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQTMSVI*PERNIL
Trigger: CAGGATATTTCTCTCTGGCCAGATCACAGACATGGT...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATCCTGTCGGGCCGCCATaGCTGGAGTGTAACACCACG +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYPVGPP*LECNTT
Trigger: CGTGGTGTTACACTCCAGTCATGGCGGCCCGACAGG...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATACGGTGCTCTCTGCCTaGTGGGCCAGGCTTGCACAG +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYTVLSA*WARLAQ
Trigger: CTGTGCAAGCCTGGCCCATCAGGCAGAGAGCACCGT...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTGCTACAAAGTCCACCACCTCGAACAGCAAAATCACTTaGCTTCAACTGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARLAQALCNVAATKSTTSNSKIT*LQLNSS
Trigger: GGAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTT...CGAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCTCTACGGCAGGACCATaGTCTTCTTCTCCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACSTAGP*SSSPAS
Trigger: AGAAGCTGGAGAAGAAGATCATGGTCCTGCCGTAGA...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCAGCCTGCATTCAGTGTaGACCCATTGTCTAGGCATT +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCSLHSV*THCLGI
Trigger: AATGCCTAGACAATGGGTTCACACTGAATGCAGGCT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGTACAGTCTTCGAGTTaGATCGGGGGCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACVQSSS*IGGSIK
Trigger: TTTGATGCTGCCCCCGATGCAACTCGAAGACTGTAC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATCTGCTCCTTCCAAAATaGCCCGGACTACTGCCTGAA +
Preference number: 4 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDLLLPK*PGLLPE
Trigger: TTCAGGCAGTAGTCCGGGGCATTTTGGAAGGAGCAG...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCAGCTTTGTCCAACCCTaGAAATCCTTTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACSFVQP*KSFQAG
Trigger: GCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCT...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATAGCAAGTCCCCGAGATaGTCCACCCGGCCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYSKSPR*STRPCS
Trigger: TGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCT...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GTGGGCTGTGTAGTTTCCATATTTAACCAGCATTCCAGGAAACACCTCATGATCTTCCACGGTGCTCTCTaGCTGATGGGCCAGGCTTGC +
Preference number: 4 (lower is better)
Translates to: VGCVVSIFNQHSRKHLMIFHGAL*LMGQAC
Trigger: GCAAGCCTGGCCCATCAGGCAGAGAGCACCGTGGAA...GATCATGAGGTGTTTCCTGGAATGCTGGTTAAATATGGAAACTACACAGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp CCAGCCCCATGGACATGCTCAGCGTCTGTGATTCCACGGTGCTCTCTGCCTGATAACAGAGGCAACAACTaGTTCAGAACAGCAAAATCA +
Preference number: 4 (lower is better)
Translates to: PAPWTCSASVIPRCSLPDNRGNN*FRTAKS
Trigger: TGATTTTGCTGTTCTGAAGCAGTTGTTGCCTCTGTT...ATCAGGCAGAGAGCACCGTGGAATCACAGACGCTGAGCATGTCCATGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTCAAGGTTGGCCAAGCTaGTGGCCCTGTGAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSQGWPS*WPCEHH
Trigger: ATGGTGCTCACAGGGCCAGCAGCTTGGCCAACCTTG...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATCCCGAGGGTCAGCCATaGTGCCAGCACTCAAGAGGC +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYPEGQP*CQHSRG
Trigger: GCCTCTTGAGTGCTGGCAGCATGGCTGACCCTCGGG...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCATTAGGCCACCAGCATaGATTCTTTCCAGCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCIRPPA*ILSSLH
Trigger: ATGCAGGCTGGAAAGAATGCATGCTGGTGGCCTAAT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCAAGCACTCCCAGGACTaGAAGCAGGGAATCCATCAA +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACKHSQD*KQGIHQ
Trigger: TTGATGGATTCCCTGCTTCCAGTCCTGGGAGTGCTT...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTCTGTTCAGTGTACTTTaGGCAGCCATGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQILFSVL*AAMLTA
Trigger: GGCCGTCAGCATGGCTGCCCAAAGTACACTGAACAG...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGCAAGCTGTTACCTCATaGACCACGGAGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEQAVTS*TTEPSR
Trigger: TCTGCTGGGCTCCGTGGTCCATGAGGTAACAGCTTG...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAACCTCAGTAGCTTTCTaGCTGAGTCCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKTSVAF*LSPRSS
Trigger: GCTGCTTCGGGGACTCAGCCAGAAAGCTACTGAGGT...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TCAGGACACTGGAACGTTTTGGATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCTTGGATTCAGTGGCCTaGTGTGGGCTGTGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: SGHWNVLDSVAWCGLCSFLDSVA*CGLCSF
Trigger: GAAACTACACAGCCCACACCAGGCCACTGAATCCAA...GAAACTACACAGCCCACACCAGGCCACTGAATCCAAAACGTTCCAGTGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 72 bp CTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTaGACAACAGAGAGGGCTAATATGAAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LIKHLWVGLIKV*TTERANMKQPA
Trigger: GGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp GATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTaGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTG +
Preference number: 4 (lower is better)
Translates to: DPSVTRAFGNCV*VPVDLVTPESV
Trigger: CACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp CAATGTTGCTGCTACAAAGTCCACCACCTCGGGAGCTaGTTAAACGTGTGGAGTCTCAGGACACTGGAACGT +
Preference number: 4 (lower is better)
Translates to: QCCCYKVHHLGS*LNVWSLRTLER
Trigger: ACGTTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGCCCCGGACTACTGCCTaGACACCATTAGGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEPRTTA*TPLGLI
Trigger: AATGAGACCTAATGGTGTTCAGGCAGTAGTCCGGGG...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCAAAATCACTTGACCATGCTCAGCGTCTGTaGTTCCACGGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DTFSNRGNNCFRTAKSLDHAQRL*FHGALC
Trigger: GCAGAGAGCACCGTGGAATCACAGACGCTGAGCATG...GTCAAGTGATTTTGCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACTCACTTGACTTCAACTaGACAGCTCCTCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDSLDFN*TAPPSM
Trigger: CATGCTAGGAGGAGCTGTTCAGTTGAAGTCAAGTGA...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GAGATCAACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTTGGATACCTTCAGCGAGTTCTTGGATaGCCGGATCAGGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: EINSEFLDDRIRVCVGYLQRVLG*PDQGMC
Trigger: ACACATACCCTGATCCGGTCATCCAAGAACTCGCTG...AAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATGAATATAGAGCTAGGTaGCATATGGGTGGCCAACCG +
Preference number: 4 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDEYRAR*HMGGQP
Trigger: CGGTTGGCCACCCATATGTCACCTAGCTCTATATTC...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAACAGTTGGCACAGACCTaGTGCGATATCCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKQLAQT*CDIPKV
Trigger: CACTTTGGGGATATCGCAGCAGGTCTGTGCCAACTG...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACGTGTCTTCACATCTGTaGAGGACTGGGGTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHVSSHL*RTGVVL
Trigger: GAGGACCACCCCAGTCCTGCACAGATGTGAAGACAC...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GAGCTAACACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCTTGAGCTTTGTCCAACCCTaGAAATCCTTTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: ELTLAGANTLLPNVGVLLSFVQP*KSFQAG
Trigger: GCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCT...CAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR GCA 90 bp GACCGGATCAGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTGGCTCTCTGCAATGTTaGTGCTACAAAGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: DRIRVCVGYLLQQRQQLLGSLQC*CYKVHH
Trigger: GTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCC...AAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCTGATGGGCCAGGCTTaGACAGGCTCTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLLMGQA*TGSLQC
Trigger: ACATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAG...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTTCTGTGATTCCACGGTaGTCTCTGCCTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSSVIPR*SLPDGP
Trigger: TGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGA...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCTCAACAGCGAGTTCTTaGATGACCGGATCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACSTASS*MTGSGY
Trigger: ATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGA...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGATCATCAACAGCGAGTTCTTaGATGACCGGATCAGGGTAT +
Preference number: 4 (lower is better)
Translates to: WVEMVMRRSTASSWMTGSSTASS*MTGSGY
Trigger: ATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGA...TGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTAGAAAGTCCAGCCTCTaGCACAGCTCCCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSRKSSL*HSSPRL
Trigger: CAACCTTGGGGAGCTGTGCCAGAGGCTGGACTTTCT...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACGAGCTAGGTGACATATaGGTGGCCAACCGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHELGDI*VANRFS
Trigger: GGAGAAGCGGTTGGCCACCCATATGTCACCTAGCTC...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp AGGGCTTACCCTTCTTCTCTGGAAGAGTCAACCAGCTaGATTGTCCTTTCTGGGCATCAGAGCCTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: RAYPSSLEESTS*IVLSGHQSLFN
Trigger: GTTGAAGAGGCTCTGATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTCCAGAGAAGAAGGGTAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp ACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTaGGATACCTTCTCCAACAGAGGCAACAACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TASSWMTGSGYV*DTFSNRGNNCF
Trigger: GAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 72 bp GGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTaGGATGACCGGATCAGGGTATGTGTTGGATACCTT +
Preference number: 4 (lower is better)
Translates to: GRDGDAEINSEF*DDRIRVCVGYL
Trigger: AAGGTATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
3UTR CAA 72 bp TATTTTCCCTTCCAGATCTTTTCTGTTCAGTGTACTTaGGGCAGCCATGCTGACGGCCTCAGTGGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: YFPFQIFSVQCT*GSHADGLSGKG
Trigger: GCCTTTGCCACTGAGGCCGTCAGCATGGCTGCCCAAAGTACACTGAACAGAAAAGATCTGGAAGGGAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCAGACATCATGTTTTGTaGCCTGTAGTGAACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCRHHVL*PVVNLS
Trigger: GCTCAAGTTCACTACAGGTCACAAAACATGATGTCT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGAGGAGCTAACACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTGTAGTAATTCTCTGGTaGAAGAGACTGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGANTGWSKYFAAKCGRSVVILW*KRLLGT
Trigger: TGTCCCCAGCAGTCTCTTTCACCAGAGAATTACTAC...AGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCGTGGCAACTCTAAACTaGCACAGAGAATGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFVATLN*HREWRE
Trigger: CTCTCTCCATTCTCTGTGTCAGTTTAGAGTTGCCAC...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCACAAAGTCCACCACCTaGGTGACGTTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACTKSTT*VTFVNI
Trigger: GATATTCACAAACGTCACTCAGGTGGTGGACTTTGT...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCAGCGAGTTCTTGGATaGCCGGATCAGGGTATGTGT +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSQRVLG*PDQGMC
Trigger: ACACATACCCTGATCCGGTCATCCAAGAACTCGCTG...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGGCTCATTGACTCCTTaGGGAATGATTGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACGSLTP*GMIGAF
Trigger: AAATGCTCCAATCATTCCTCAAGGAGTCAATGAGCC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAATTTCCAAGAATATCTTaGGAAGCTTCTCTTGCATCT +
Preference number: 4 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQFPRIS*EASLAS
Trigger: AGATGCAAGAGAAGCTTCTCAAGATATTCTTGGAAA...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAAACAGCAGCAGGAGTaGAGAAGAATGGCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSKQQQE*RRMAWE
Trigger: CTCCCAGGCCATTCTTCTTCACTCCTGCTGCTGTTT...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCTCAGAACCATGTCTGTaGTCTGGCCAGAGAGAAATA +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACSEPCL*SGQREI
Trigger: TATTTCTCTCTGGCCAGATCACAGACATGGTTCTGA...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TTGCTGCTACAAAGTCCACCACCTCGGGAGCTTGTTAAACGTGTGGAGTCTCAGTGGCAACTACTGACCTaGGTGACGTTTGTGAATATC +
Preference number: 4 (lower is better)
Translates to: LLLQSPPPRELVKRVESQWQLLT*VTFVNI
Trigger: GATATTCACAAACGTCACTCAGGTCAGTAGTTGCCA...CTGAGACTCCACACGTTTAACAAGCTCCCGAGGTGGTGGACTTTGTAGCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGAATGCCCCGGACTACTaGCTGAACACCATTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLNAPDY*LNTIRS
Trigger: AGACCTAATGGTGTTCAGGCAGTAGTCCGGGGCATT...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCAGAGGCCAAAATCTTTaGGATCAGGTCACACTTCTT +
Preference number: 4 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCRGQNL*DQVTLL
Trigger: AAGAAGTGTGACCTGATCGCAAAGATTTTGGCCTCT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCAAAATCACTTGACTCTGTGATTCCACGGTaGTCTCTGCCTGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: DTFSNRGNNCFRTAKSLDSVIPR*SLPDGP
Trigger: TGGCCCATCAGGCAGAGAGCACCGTGGAATCACAGA...GTCAAGTGATTTTGCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGAAGACCCAAGTGACCTaGACCATAAAACCACCCCGA +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLKTQVT*TIKPPR
Trigger: TCGGGGTGGTTTTATGGTGCAGGTCACTTGGGTCTT...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTCTCCTACTCTGAAATaGCTCTTGAGCAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQISPTLK*LLSSQG
Trigger: CCCTTGGCTGCTCAAGAGGCATTTCAGAGTAGGAGA...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCCAGTTTTCTTTTGGTTaGGCAGAATCCCAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: IVSTALALGHQHAFFPACQFSFG*AESQLA
Trigger: TGCCAACTGGGATTCTGCCCAACCAAAAGAAAACTG...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GAATGGAGAGAGGGCACAGCTTTGTCCAACCCTGCAAATCCTTTCAGGCTGGCACAAATCCTTTCAGGCTaGCAATTGCCTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EWREGTALSNPANPFRLAQILSG*QLPSSF
Trigger: AAAGGAAGAAGGCAATTGCCAGCCTGAAAGGATTTG...TGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGCCCTCTCTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGGGCAGCAGCCCGTGTTaGAATTTGAGGGTCATAAGC +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLGSSPC*NLRVIS
Trigger: GCTTATGACCCTCAAATTCCAACACGGGCTGCTGCC...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGCTGATCAAGCATCTCTaGGTTGGCCTCATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLLIKHL*VGLIKV
Trigger: CACCTTGATGAGGCCAACCCAGAGATGCTTGATCAG...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAGACAGTCTTCTGTTGTaGGATACTAAGTGCATCGGG +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLDSLLL*DTKCIG
Trigger: CCCGATGCACTTAGTATCTCACAACAGAAGACTGTC...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGGTAGTAATTCTCTGGTaGAAGAGACTGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLVVILW*KRLLGT
Trigger: TGTCCCCAGCAGTCTCTTTCACCAGAGAATTACTAC...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATCCTTTCAGGCTGGCAATTGCCTTCTTCCTTTCCAGCTTCCCCAGAATCCATAGTGGTGGCAACTCTCTaGAATTGTCGTGCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: ILSGWQLPSSFPASPESIVVATL*NCRAVN
Trigger: ATTGACAGCACGACAATTTCAGAGAGTTGCCACCAC...TATGGATTCTGGGGAAGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp GAATGGAGAGAGGGCACAGCTTTGTCCAACCCTGCAAATCCTTTCAGGCTGGCAATGTGGGCGTTCTCTTaGCAAAGTTATAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: EWREGTALSNPANPFRLAMWAFS*QSYKGS
Trigger: ACTACCTTTATAACTTTGTCAAGAGAACGCCCACAT...TGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGCCCTCTCTCCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp AGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCTCACTTGACTTCAACTaGACAGCTCCTCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RVCVGYLLQQRQQLLQNSSLDFN*TAPPSM
Trigger: CATGCTAGGAGGAGCTGTTCAGTTGAAGTCAAGTGA...GCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTACGCTTCCAGATTTCTaGCTTGTAGTAGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSTLPDF*LVVVLG
Trigger: GCCCAGCACTACTACAAGTCAGAAATCTGGAAGCGT...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTTTGCTGCTGTCATATTaGGCCAACAAGTCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSLLLSY*ANKSGK
Trigger: CTTGCCGGACTTGTTGGCTCAATATGACAGCAGCAA...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTGCAGCTCTGCGTACTTaGACTTCACCATCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQIAALRT*TSPSVL
Trigger: CAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGC...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTAAGAGTCAACCAGCTTaGTTGTCCTTTCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQIKSQPA*LSFLGI
Trigger: GATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTT...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCAGAGAGGGCTAATATaGAGCAGCCAGCCAGTATCT +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSQRGLI*SSQPVS
Trigger: AGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTG...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCATTCAGAAGGGCCTTaGAGCTGGTGTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLHSEGP*SWCTVF
Trigger: GAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATG...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATGAGCAAATACTTTGCTaGCAAATGTGGGCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDEQILC*QMWAFS
Trigger: AGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTC...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTATCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTG +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLSLQCC*YKVHHL
Trigger: CAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGA...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTGGCTCTCTGCAATGTTaGTGCTACAAAGTCCACCAC +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSGSLQC*CYKVHH
Trigger: GTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCC...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp ATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAACCAGCATTCCAGGCTTGCACAGGCTCTCTaGAATGTTGCTGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: IQWPGVGCVVSIFNQHSRLAQAL*NVAATK
Trigger: CTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAG...CCTGGAATGCTGGTTAAATATGGAAACTACACAGCCCACACCAGGCCACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR GCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACGCTGTCTCATGGCTCTaGTGTTGTTCAAGGTGGCTA +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHAVSWL*CCSRWL
Trigger: TAGCCACCTTGAACAACAGCAGAGCCATGAGACAGC...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGCATGTATGGCAGCTCTaGGTACTTGAACTTCACCAT +
Preference number: 4 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLHVWQL*VLELHH
Trigger: ATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATG...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAGCCTCTTTAAAGGGATaGCACCAAGGAAGATCTGAC +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLASLKG*HQGRSD
Trigger: GTCAGATCTTCCTTGGTGGCATCCCTTTAAAGAGGC...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGGGTGAAAGAGACTGCTaGGGACAAGAGGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLGERDC*GQEAKI
Trigger: GATTTTGGCCTCTTGTCCCCAGCAGTCTCTTTCACC...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AACACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCTTGACAAAGGTGAAAGAGACTGCTaGGGACAAGAGGCCAAAATC +
Preference number: 4 (lower is better)
Translates to: NTGWSKYFAAKCGRSLDKGERDC*GQEAKI
Trigger: GATTTTGGCCTCTTGTCCCCAGCAGTCTCTTTCACC...TTTGTCAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp CTTTCAGGCTGGCAATTGCCTTCTTCCTTTCCAGCTTCCCCAGAATCCATAATAAAGCACTCCCAGGACTaGAAGCAGGGAATCCATCAA +
Preference number: 4 (lower is better)
Translates to: LSGWQLPSSFPASPESIIKHSQD*KQGIHQ
Trigger: TTGATGGATTCCCTGCTTCCAGTCCTGGGAGTGCTT...TATTATGGATTCTGGGGAAGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAGCACAACCACATGTATaGCAGCTCTGCGTACTTGAA +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLAQPHV*QLCVLE
Trigger: TTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGC...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCTTCTCCAGCTTCTGTaGAGGGAACAGGAAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFLLQLL*REQEVF
Trigger: AAAAACTTCCTGTTCCCTCCACAGAAGCTGGAGAAG...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGGTATTCAAACATCGATaGAGAGGAGCTAACACTGGC +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEVFKHR*RGANTG
Trigger: GCCAGTGTTAGCTCCTCTTCATCGATGTTTGAATAC...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGAGGAGCTAACACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCAAAGTGACCTTATGTaGGACACACTCTGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: RGANTGWSKYFAAKCGRSQSDLM*DTLCLV
Trigger: TACTAAGCAGAGTGTGTCTCACATAAGGTCACTTTG...AGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATCCACAGTGCTATATCTaGAATTGTTTCAACAGCCCT +
Preference number: 4 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDPQCYI*NCFNSP
Trigger: AGGGCTGTTGAAACAATTTCAGATATAGCACTGTGG...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACAAGGTAACTACAAACTaGAAAACGAACTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDKVTTN*KTNWTV
Trigger: GACTGTCCAGTTCGTTTTGCAGTTTGTAGTTACCTT...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTCTTGCACAGGCTCTCTaGAATGTTGCTGCTACAAAG +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSLAQAL*NVAATK
Trigger: CTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAG...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGGTTATCTCTTTTAGCTaGAATCAAAATGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLVISFS*NQNAAA
Trigger: GGCCGCTGCATTTTGATTGCAGCTAAAAGAGATAAC...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp CAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCATCAGTCATGTTAAAATATACGCCGAAGCCAAGCTaGGGCCCGACACCTCATCTG +
Preference number: 4 (lower is better)
Translates to: QVPREWAISEIPSVMLKYTPKPS*GPTPHL
Trigger: CAGATGAGGTGTCGGGCCCCAGCTTGGCTTCGGCGT...ATATTTTAACATGACTGATGGAATTTCACTAATTGCCCACTCTCTTGGAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGTCAGAGGATACCTTCTaGTACAGGGCTTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLSEDTF*YRASSS
Trigger: TGAAGATGAAGCCCTGTACCAGAAGGTATCCTCTGA...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATTCAGTGGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAACCAGCATTCCAGGGATCAGGGTATGTGTTaGATACCTTCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: IQWPGVGCVVSIFNQHSRDQGMC*IPSPTE
Trigger: CTCTGTTGGAGAAGGTATCCAACACATACCCTGATC...CCTGGAATGCTGGTTAAATATGGAAACTACACAGCCCACACCAGGCCACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAGACAAAAGAACCTCTTaGAGCTGTTCTGTGGTTACG +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKDKRTS*SCSVVT
Trigger: CGTAACCACAGAACAGCTCCAAGAGGTTCTTTTGTC...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTAGTCACTCGAGCTTTTaGAAACTGCGTTTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQISHSSF*KLRFGS
Trigger: GGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACT...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCTATTGTACATCCAGCTaGCCCAAAGGAGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFYCTSS*PKGDSS
Trigger: AGAAGAATCTCCTTTGGGCCAGCTGGATGTACAATA...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp TGGCCTGGTGTGGGCTGTGTAGTTTCCATATTTAACCAGCATTCCAGGAAACACAGCTTGTTAAACGTGTaGAGTCTCAGGACACTGGAA +
Preference number: 4 (lower is better)
Translates to: WPGVGCVVSIFNQHSRKHSLLNV*SLRTLE
Trigger: TTCCAGTGTCCTGAGACTCCACACGTTTAACAAGCT...GTGTTTCCTGGAATGCTGGTTAAATATGGAAACTACACAGCCCACACCAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR TCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGTTCAGATTCTTCCACTaGGGATCCTTCAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEFRFFH*GSFRNL
Trigger: CAAGTTTCTGAAGGATCCTCAGTGGAAGAATCTGAA...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAAGCAACAACAAGGTTTaGGAGGTAAAACTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKSNNKV*EVKLQV
Trigger: CACTTGGAGTTTTACCTCTCAAACCTTGTTGTTGCT...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAATACCATGTCACTCTCTaGAAGCTCTGCTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKYHVTL*KLCCIQ
Trigger: TTGAATACAGCAGAGCTTTCAGAGAGTGACATGGTA...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTTTTTCCGAGGCCACATaGGTCAACTCTTTCAAACAG +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSFSEAT*VNSFKQ
Trigger: CTGTTTGAAAGAGTTGACTCATGTGGCCTCGGAAAA...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp CAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCATCAGTCATGTTAAAATATGGTGGTAGAGATCCTTaGGGACGGCGCTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: QVPREWAISEIPSVMLKYGGRDP*GRRSAP
Trigger: AGGTGCTGAGCGCCGTCCTCAAGGATCTCTACCACC...ATATTTTAACATGACTGATGGAATTTCACTAATTGCCCACTCTCTTGGAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp CATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATACAGGAAGTTTTTCATaGTGTCATCCAGCTCTTCTA +
Preference number: 4 (lower is better)
Translates to: HQSLFNSTVFHLDTRGPDTGSFS*CHPALL
Trigger: TAGAAGAGCTGGATGACATCATGAAAAACTTCCTGT...ATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGATGAAGAAGTCTCCTaGCAAACCGCATTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYDEEVS*QTAFLA
Trigger: TGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAATTGAGAAGCTTCTCTTaGATCTCAAGGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKLRSFS*ISRAFA
Trigger: AGCAAAAGCCCTTGAGATGCAAGAGAAGCTTCTCAA...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGGCATTCTTTCCAGCCTaGATTCAGTGTGAACCCATT +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLAFFPA*IQCEPI
Trigger: AATGGGTTCACACTGAATGCAGGCTGGAAAGAATGC...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCGAGCTTTTGGAAACTaGGTTTTGGTTCCTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSRAFGN*VLVPVD
Trigger: ATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCG...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCTGCAAGGCGGATCATaGTTTCCTTCAAGCACAAAA +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLLQGGS*FPSSTK
Trigger: TTTTGTGCTTGAAGGAAACCATGATCCGCCTTGCAG...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTCTTGATTGTCCTTTCTaGGCATCAGAGCCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSLDCPF*ASEPLQ
Trigger: TTGAAGAGGCTCTGATGCCCAGAAAGGACAATCAAG...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
3UTR CAA 72 bp GATGAAGAGGAGCTAACACTGGCTGGAGCAAATACTTaGCTGCCAAATGTGGGCGTTCTCTTGACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: DEEELTLAGANT*LPNVGVLLTKL
Trigger: TAACTTTGTCAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTCCTCTTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGTGGTGGCAACTCTCTaGAATTGTCGTGCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYVVATL*NCRAVN
Trigger: ATTGACAGCACGACAATTTCAGAGAGTTGCCACCAC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCAAAGTGACCTTATGTaGGACACACTCTGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLQSDLM*DTLCLV
Trigger: TACTAAGCAGAGTGTGTCTCACATAAGGTCACTTTG...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTTCCACAAGAAGAGTCTaGTGTTGCTCTAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSSTRRV*CCSNSK
Trigger: CTTGGAATTAGAGCAACATCAGACTCTTCTTGTGGA...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGGTTTTGTGGCCATTCTaGCTTATCAGCAATTTCATC +
Preference number: 4 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEVLWPF*LISNFI
Trigger: GATGAAATTGCTGATAAGGCAGAATGGCCACAAAAC...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGTGGATTGAAATTAGCTaGAAGGCGGATCATGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLWIEIS*KADHGF
Trigger: GAAACCATGATCCGCCTTGCAGCTAATTTCAATCCA...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACACGTTTGTGAATATCTaGTCAGACATTCTCTCGCAC +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHTFVNI*SDILSH
Trigger: GTGCGAGAGAATGTCTGAGCAGATATTCACAAACGT...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAAACAGAGGCAACAACTaGTTCAGAACAGCAAAATCA +
Preference number: 4 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLNRGNN*FRTAKS
Trigger: TGATTTTGCTGTTCTGAAGCAGTTGTTGCCTCTGTT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACTGTGCTTGTCTTTGCTaGTGTCATATTGAGCCAACA +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHCACLC*CHIEPT
Trigger: TGTTGGCTCAATATGACAGCAGCAAAGACAAGCACA...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACTGTAAACTCTCTGGATaGTCGTGGTTCTTTTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHCKLSG*SWFFSP
Trigger: AGGAGAAAAGAACCACGAGCATCCAGAGAGTTTACA...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTTTGTTCTAACTCTCTaGTCACTAAGCTCACTTGTG +
Preference number: 4 (lower is better)
Translates to: IRASSTPQFSISTPEDQIFVLTL*SLSSLV
Trigger: CACAAGTGAGCTTAGTGAGCAGAGAGTTAGAACAAA...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGAGGGTTGGGTTTACCTaGATTGAAATTAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLRVGFT*IEISCK
Trigger: CTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCT...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTCAAATCCTTTCAGGCTaGCAATTGCCTTCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSQILSG*QLPSSF
Trigger: AAAGGAAGAAGGCAATTGCCAGCCTGAAAGGATTTG...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTATGTGGGCGTTCTCTTaGCAAAGTTATAAAGGTAGT +
Preference number: 4 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSMWAFS*QSYKGS
Trigger: ACTACCTTTATAACTTTGTCAAGAGAACGCCCACAT...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGTGTGTGCTTGTCTTTaGTGCTGTCATATTGAGCCA +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYVCACL*CCHIEP
Trigger: TGGCTCAATATGACAGCAGCAAAGACAAGCACACAC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp CCAGAATCCATAATAAGATTTCTTGGCAAAGTGACCTTATGTGAGACACACTCTGGAGCTAACACTGGCTaGAGCAAATACTTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: PESIIRFLGKVTLCETHSGANTG*SKYFAA
Trigger: GGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTCC...AGAGTGTGTCTCACATAAGGTCACTTTGCCAAGAAATCTTATTATGGATTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGATCAGGGTATGTGTTaGATACCTTCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYDQGMC*IPSPTE
Trigger: CTCTGTTGGAGAAGGTATCCAACACATACCCTGATC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TTCCTGGTACCATGTCACTCTCTGAAAGCTCTGCTGTATTCAAACATCGATGAATACCATGTCACTCTCTaGAAGCTCTGCTGTATTCAA +
Preference number: 4 (lower is better)
Translates to: FLVPCHSLKALLYSNIDEYHVTL*KLCCIQ
Trigger: TTGAATACAGCAGAGCTTTCAGAGAGTGACATGGTA...TTCATCGATGTTTGAATACAGCAGAGCTTTCAGAGAGTGACATGGTACCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATGATTTCTTGGCAAAGTaGCCTTATGTGAGACACACT +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYDFLAK*PYVRHT
Trigger: AGTGTGTCTCACATAAGGTCACTTTGCCAAGAAATC...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp CTGGCAATTGCCTTCTTCCTTTCCAGCTTCCCCAGAATCCATAATAAGATTTCTGATTTCTTGGCAAAGTaGCCTTATGTGAGACACACT +
Preference number: 4 (lower is better)
Translates to: LAIAFFLSSFPRIHNKISDFLAK*PYVRHT
Trigger: AGTGTGTCTCACATAAGGTCACTTTGCCAAGAAATC...AGAAATCTTATTATGGATTCTGGGGAAGCTGGAAAGGAAGAAGGCAATTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATAACAGCAAAATCACTTaGCTTCAACTGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYNSKIT*LQLNSS
Trigger: GGAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTT...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CCA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGGCTACACTAGCTGAATaGAAATATTCCTTAAACACA +
Preference number: 4 (lower is better)
Translates to: VLTTERANMKQPASISFLATLAE*KYSLNT
Trigger: TGTGTTTAAGGAATATTTCCATTCAGCTAGTGTAGC...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp ATCCTCAATGCATCTACTAAGTTCTTCTTCTGTCACCAAAATAGTTCCTGGTACGTATTCAAACATCGATaGAGAGGAGCTAACACTGGC +
Preference number: 4 (lower is better)
Translates to: ILNASTKFFFCHQNSSWYVFKHR*RGANTG
Trigger: GCCAGTGTTAGCTCCTCTTCATCGATGTTTGAATAC...GTACCAGGAACTATTTTGGTGACAGAAGAAGAACTTAGTAGATGCATTGAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp CAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCATCAGTCATGTTAAAATATCCCCGACTTTCATTCTaGTCTCTGGTGTGTGCTTGT +
Preference number: 4 (lower is better)
Translates to: QVPREWAISEIPSVMLKYPRLSF*SLVCAC
Trigger: ACAAGCACACACCAGAGACCAGAATGAAAGTCGGGG...ATATTTTAACATGACTGATGGAATTTCACTAATTGCCCACTCTCTTGGAACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR TCA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATTCCAGCTACACTAGCTaGATGGAAATATTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYSSYTS*MEIFLK
Trigger: TTTAAGGAATATTTCCATTCAGCTAGTGTAGCTGGA...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR GCA 90 bp CACCTTAAACACATCCTCAATGCATCTACTAAGTTCTTCTTCTGTCACCAAAATGAGCAAATACTTTGCTaGCAAATGTGGGCGTTCTCT +
Preference number: 4 (lower is better)
Translates to: HLKHILNASTKFFFCHQNEQILC*QMWAFS
Trigger: AGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTC...ATTTTGGTGACAGAAGAAGAACTTAGTAGATGCATTGAGGATGTGTTTAAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CCA 90 bp CAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCATCAGTCATGTTAAAATATAACTGCAAAACGAACTaGACAGTCTTCTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: QVPREWAISEIPSVMLKYNCKTN*TVFCCE
Trigger: CTCACAACAGAAGACTGTCCAGTTCGTTTTGCAGTT...ATATTTTAACATGACTGATGGAATTTCACTAATTGCCCACTCTCTTGGAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp CGCATGTCTCCTGAGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATaGCTGGAGTGTAACACCACGCTCGCGACCCGCTCAGGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: RMSPEPRCPRPVGPP*LECNTTLATRSGAS
Trigger: CGAGGCGCCTGAGCGGGTCGCGAGCGTGGTGTTACACTCCAGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGGAGACATGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 90 bp TGTCTCCTGAGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATGACTaGAGTGTAACACCACGCTCGCGACCCGCTCAGGCGCCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: CLLSPAAHGLSGRHD*SVTPRSRPAQAPRQ
Trigger: CTGCCGAGGCGCCTGAGCGGGTCGCGAGCGTGGTGTTACACTCCAGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGGAGACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp AGCAGCTTCAATGCCTCCAAAATCCGATCCAGACCGCATGTCTCCTaGGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATGACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: SSFNASKIRSRPHVS*APLPTACRAAMTGV
Trigger: CACTCCAGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGGAGACATGCGGTCTGGATCGGATTTTGGAGGCATTGAAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS GCA 90 bp CCTGCCAAACCGCATTCCTGGCAGTGGGACAGCAAGTCCCCGAGATaGTCCACCCGGCCCTGCTCAGAGGATACCTTCTGGTACAGGGCT +
Preference number: 5 (lower is better)
Translates to: PAKPHSWQWDSKSPR*STRPCSEDTFWYRA
Trigger: AGCCCTGTACCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 90 bp CGGAGCCCAGCAGAAAGTCCAGCCTCTGGCACAGCTCCCCAAGGTTaGCCAAGCTGCTGGCCCTGTGAGCACCATCAGGATCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: RSPAESPASGTAPQG*PSCWPCEHHQDLSL
Trigger: GAGTGAGAGATCCTGATGGTGCTCACAGGGCCAGCAGCTTGGCCAACCTTGGGGAGCTGTGCCAGAGGCTGGACTTTCTGCTGGGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS GCA 90 bp GCGACAGAGCAAGACTCCGTCTCCCGGGCTCAGCAGCAGCTTCAATaGCTCCAAAATCCGATCCAGACCGCATGTCTCCTGAGCCCCGCT +
Preference number: 5 (lower is better)
Translates to: ATEQDSVSRAQQQLQ*LQNPIQTACLLSPA
Trigger: AGCGGGGCTCAGGAGACATGCGGTCTGGATCGGATTTTGGAGGCATTGAAGCTGCTGCTGAGCCCGGGAGACGGAGTCTTGCTCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565037.1
CDS-3UTR CAA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAGCCTCCTCCACGTCCTaGGAGCCAGGTCTACGGCAG +
Preference number: 5 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQASSTS*EPGLRQ
Trigger: CTGCCGTAGACCTGGCTCCAAGGACGTGGAGGAGGC...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 90 bp TCCTGGCAGTGGGACAGCAAGTCCCCGAGATGCTCCACCCGGCCCTaGTCAGAGGATACCTTCTGGTACAGGGCTTCATCTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SWQWDSKSPRCSTRP*SEDTFWYRASSSSS
Trigger: TGAAGATGAAGATGAAGCCCTGTACCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 90 bp AAACAGAAGATGAAGAAGTCTCCTGCCAAACCGCATTCCTGGCAGTaGGACAGCAAGTCCCCGAGATGCTCCACCCGGCCCTGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: KQKMKKSPAKPHSWQ*DSKSPRCSTRPCSE
Trigger: CTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATCTTCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 90 bp TCTTTCAAACAGAAGATGAAGAAGTCTCCTGCCAAACCGCATTCCTaGCAGTGGGACAGCAAGTCCCCGAGATGCTCCACCCGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SFKQKMKKSPAKPHS*QWDSKSPRCSTRPC
Trigger: GCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATCTTCTGTTTGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGCCTGATGGGCCAGGCTaGCACAGGCTCTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SMGRDGDAEINSEFLDDRPDGPG*HRLSAM
Trigger: CATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGG...CCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACAACTGGGCATGGAGCTaGGCCACGTCATCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDNWAWS*ATSSGS
Trigger: GGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGTT...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGCACAGCTCCCCAAGGTaGGCCAAGCTGCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEHSSPR*AKLLAL
Trigger: CAGGGCCAGCAGCTTGGCCAACCTTGGGGAGCTGTG...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp GCTGCTCCCGCACCTGCTCCTTCCAAAATGCCCCGGACTACTGCCTaGACACCATTAGGTCTCATTAACCTTTCAGAGAGCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AAPAPAPSKMPRTTA*TPLGLINLSESSCP
Trigger: TGGACAGCTGCTCTCTGAAAGGTTAATGAGACCTAATGGTGTTCAGGCAGTAGTCCGGGGCATTTTGGAAGGAGCAGGTGCGGGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 90 bp AGCAACATTCAGAAGGGCCTTGCAGCTGGTGTACAGTCTTCGAGTTaGATCGGGGGCAGCATCAAAACACACCACGTCTTGAACGACGGC +
Preference number: 5 (lower is better)
Translates to: SNIQKGLAAGVQSSS*IGGSIKTHHVLNDG
Trigger: GCCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 90 bp TCAAGCTCCCCAGAGATGTGTGCTGAGCAACATTCAGAAGGGCCTTaGAGCTGGTGTACAGTCTTCGAGTTGCATCGGGGGCAGCATCAA +
Preference number: 5 (lower is better)
Translates to: SSSPEMCAEQHSEGP*SWCTVFELHRGQHQ
Trigger: TTGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGTTGCTCAGCACACATCTCTGGGGAGCTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CCA 90 bp TTATCATTAATGAGTCACCCCCAAGAGTCCCTAGGCCTGAGTACCTaGGGTGGTCCTCCCTGGAGGATAAGCAGTTCCCGGACTGCTAAG +
Preference number: 5 (lower is better)
Translates to: LSLMSHPQESLGLST*GGPPWRISSSRTAK
Trigger: CTTAGCAGTCCGGGAACTGCTTATCCTCCAGGGAGGACCACCCCAGGTACTCAGGCCTAGGGACTCTTGGGGGTGACTCATTAATGATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561566.1
CDS CCA 90 bp AAGTCCCCGAGATGCTCCACCCGGCCCTGCTCAGAGGATACCTTCTaGTACAGGGCTTCATCTTCATCTTCATCACTAATGGCCTCTTTG +
Preference number: 5 (lower is better)
Translates to: KSPRCSTRPCSEDTF*YRASSSSSSLMASL
Trigger: CAAAGAGGCCATTAGTGATGAAGATGAAGATGAAGCCCTGTACCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000562491.1
CDS CCA 90 bp AAGTTTTTCATGATGTCATCCAGCTCTTCTAGGGCCAACTGGGCATaGAGCTTGGCCACGTCATCGGGCTCCAGACACACTACGTGCTTC +
Preference number: 5 (lower is better)
Translates to: KFFMMSSSSSRANWA*SLATSSGSRHTTCF
Trigger: GAAGCACGTAGTGTGTCTGGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGTTGGCCCTAGAAGAGCTGGATGACATCATGAAAAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000561931.1
CDS CCA 90 bp AACAGGAAGTTTTTCATGATGTCATCCAGCTCTTCTAGGGCCAACTaGGCATGGAGCTTGGCCACGTCATCGGGCTCCAGACACACTACG +
Preference number: 5 (lower is better)
Translates to: NRKFFMMSSSSSRAN*AWSLATSSGSRHTT
Trigger: CGTAGTGTGTCTGGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGTTGGCCCTAGAAGAGCTGGATGACATCATGAAAAACTTCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000561931.1
CDS-3UTR CAA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCAAGCAGCTTCCGCTCTaGGCCTTCCACAAGAAGAGT +
Preference number: 5 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCKQLPL*AFHKKS
Trigger: ACTCTTCTTGTGGAAGGCCAAGAGCGGAAGCTGCTT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGTGACCTGCACCATAAAACCACCCCGAGGGTCAGCCATGCTGCCAGCACTCAAGGATCAGGGTATGTGTaGGATACCTTCTCCAACAGA +
Preference number: 5 (lower is better)
Translates to: SDLHHKTTPRVSHAASTQGSGYV*DTFSNR
Trigger: TCTGTTGGAGAAGGTATCCAACACATACCCTGATCC...TTGAGTGCTGGCAGCATGGCTGACCCTCGGGGTGGTTTTATGGTGCAGGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACGGGCAGCAGCCCGTGTaGGAATTTGAGGGTCATAAG +
Preference number: 5 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDGQQPV*EFEGHK
Trigger: CTTATGACCCTCAAATTCCAACACGGGCTGCTGCCC...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp TGCAGGACAAGCAGCTTCCGCTCTTGGCCTTCCACAAGAAGAGTCTaGTGTTGCTCTAATTCCAAGAGGCTCTTGCTGGAGAAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: CRTSSFRSWPSTRRV*CCSNSKRLLLEKGS
Trigger: TGAGCCCTTCTCCAGCAAGAGCCTCTTGGAATTAGAGCAACATCAGACTCTTCTTGTGGAAGGCCAAGAGCGGAAGCTGCTTGTCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp CCCCGAAGCAGCAGCACAACCACATGTATGGCAGCTCTGCGTACTTaGACTTCACCATCTGTTTTGGCCACAGCAATCAGGCAAGCTGTT +
Preference number: 5 (lower is better)
Translates to: PRSSSTTTCMAALRT*TSPSVLATAIRQAV
Trigger: AACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGCTGCTGCTTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261778.2
ENST00000561931.1
ENST00000562000.5
ENST00000568361.5
CDS GCA 90 bp GGCCACATGAGTCAACTCTTTCAAACAGAAGATGAAGAAGTCTCCTaGCAAACCGCATTCCTGGCAGTGGGACAGCAAGTCCCCGAGATG +
Preference number: 5 (lower is better)
Translates to: GHMSQLFQTEDEEVS*QTAFLAVGQQVPEM
Trigger: CATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATCTTCTGTTTGAAAGAGTTGACTCATGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 90 bp GCTCAGGGCAGGAGCAACTTCCGGAGTCCTAGGGTTGGGTTTACCTaGATTGAAATTAGCTGCAAGGCGGATCATGGTTTCCTTCAAGCA +
Preference number: 5 (lower is better)
Translates to: AQGRSNFRSPRVGFT*IEISCKADHGFLQA
Trigger: TGCTTGAAGGAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCTGCCCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CCA 90 bp CCACATGTATGGCAGCTCTGCGTACTTGAACTTCACCATCTGTTTTaGCCACAGCAATCAGGCAAGCTGTTACCTCATGGACCACGGAGC +
Preference number: 5 (lower is better)
Translates to: PHVWQLCVLELHHLF*PQQSGKLLPHGPRS
Trigger: GCTCCGTGGTCCATGAGGTAACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS-3UTR CAA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCAGGCTCTCTGCAATGTaGCTGCTACAAAGTCCACCA +
Preference number: 5 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCRLSAM*LLQSPP
Trigger: TGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCT...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GGCTCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACAGGCTCTCTGCAATGTaGCTGCTACAAAGTCCACCA +
Preference number: 5 (lower is better)
Translates to: GSMGRDGDAEINSEFLDDRLSAM*LLQSPP
Trigger: TGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCT...GTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp AAACTCTCTGGATGCTCGTGGTTCTTTTCTCCTGATAATCAGGGCAACTCTCTGCCTGATGGGCCAGGCTaGCACAGGCTCTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: KLSGCSWFFSPDNQGNSLPDGPG*HRLSAM
Trigger: CATTGCAGAGAGCCTGTGCAAGCCTGGCCCATCAGG...CAGAGAGTTGCCCTGATTATCAGGAGAAAAGAACCACGAGCATCCAGAGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCGGCCTCATCAAGGTGTaGACAACAGAGAGGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCGLIKV*TTERAN
Trigger: ATTAGCCCTCTCTGTTGTCAACACCTTGATGAGGCC...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp AGTACGCAGGGCAGCAGCCCGTGTTGGAATTTGAGGGTCATAAGCTaGCAAAAGAACCTCTTGGAGCTGTTCTGTGGTTACGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: STQGSSPCWNLRVIS*QKNLLELFCGYASR
Trigger: TCTGGAAGCGTAACCACAGAACAGCTCCAAGAGGTTCTTTTGTCAGCTTATGACCCTCAAATTCCAACACGGGCTGCTGCCCTGCGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 90 bp ATCTTGAGAAGCTTCTCTTGCATCTCAAGGGCTTTTGCTTCTCTCTaGTCTATCCAGTGGGAAAGAGTACGCAGGGCAGCAGCCCGTGTT +
Preference number: 5 (lower is better)
Translates to: ILRSFSCISRAFASL*SIQWERVRRAAARV
Trigger: AACACGGGCTGCTGCCCTGCGTACTCTTTCCCACTGGATAGAGCAGAGAGAAGCAAAAGCCCTTGAGATGCAAGAGAAGCTTCTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACTGGGCAGAATCCCAGTaGGCACAGACCTGCTGCGAT +
Preference number: 5 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHWAESQ*AQTCCD
Trigger: ATCGCAGCAGGTCTGTGCCAACTGGGATTCTGCCCA...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGGGTATGTGTTGGATACCTTCTCCAACAGAGGCAACAACTGCTTCAGAACAGCTCTGTTCAGTGTACTTaGGGCAGCCATGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: RVCVGYLLQQRQQLLQNSSVQCT*GSHADG
Trigger: GCCGTCAGCATGGCTGCCCAAAGTACACTGAACAGA...GCTGTTCTGAAGCAGTTGTTGCCTCTGTTGGAGAAGGTATCCAACACATACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAACTCTGAAATGCCTCTaGAGCAGCCAAGGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLTLKCL*SSQGWP
Trigger: TGGCCACCCTTGGCTGCTCAAGAGGCATTTCAGAGT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp CAAGGTAACTACAAACTGCAAAACGAACTGGACAGTCTTCTGTTGTaGGATACTAAGTGCATCGGGGCTCAGGGCAGGAGCAACTTCCGG +
Preference number: 5 (lower is better)
Translates to: QGNYKLQNELDSLLL*DTKCIGAQGRSNFR
Trigger: CCGGAAGTTGCTCCTGCCCTGAGCCCCGATGCACTTAGTATCTCACAACAGAAGACTGTCCAGTTCGTTTTGCAGTTTGTAGTTACCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CCA 90 bp CCACATGTATGGCAGCTCTGCGTACTTGAACTTCACCATCTGTTTTaGCCACAGCAATCAGGCAAGCTGTTACCTTCTCACTCTGCCATG +
Preference number: 5 (lower is better)
Translates to: PHVWQLCVLELHHLF*PQQSGKLLPSHSAM
Trigger: CATGGCAGAGTGAGAAGGTAACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561931.1
CDS-3UTR CAA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCGGATCCTTCAGAAACTaGTCCTCCAAAGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFGSFRN*SSKADR
Trigger: CCTGTCTGCTTTGGAGGACAAGTTTCTGAAGGATCC...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGACATCCACAGAGTTTaGTGGCCATTCTGCCTTATC +
Preference number: 5 (lower is better)
Translates to: IVSTALALGHQHAFFPACDIHRV*WPFCLI
Trigger: GATAAGGCAGAATGGCCACAAAACTCTGTGGATGTC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp ATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGATCAGGGTATGTGTTGGATATCAACAGCGAGTTCTaGGATGACCGGATCAGGGTA +
Preference number: 5 (lower is better)
Translates to: MRRSTASSWMTGSGYVLDINSEF*DDRIRV
Trigger: TACCCTGATCCGGTCATCCAAGAACTCGCTGTTGAT...ATCCAACACATACCCTGATCCGGTCATCCAAGAACTCGCTGTTGATCTCCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACTCTGTTCAGTGTACTTaGGGCAGCCATGCTGACGGC +
Preference number: 5 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHSVQCT*GSHADG
Trigger: GCCGTCAGCATGGCTGCCCAAAGTACACTGAACAGA...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp ATTGTTTCAACAGCCCTGGCATTAGGCCACCAGCATGCATTCTTTCCAGCCTGCGGGCTCATTGACTCCTaGAGGAATGATTGGAGCATT +
Preference number: 5 (lower is better)
Translates to: IVSTALALGHQHAFFPACGLIDS*RNDWSI
Trigger: AATGCTCCAATCATTCCTCAAGGAGTCAATGAGCCC...GCAGGCTGGAAAGAATGCATGCTGGTGGCCTAATGCCAGGGCTGTTGAAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp AGTCTTCGAGTTGCATCGGGGGCAGCATCAAAACACACCACGTCTTaGACGACGGCACCAAATTCAGTTCTATATCTCAAAGGGACTCCA +
Preference number: 5 (lower is better)
Translates to: SLRVASGAASKHTTS*TTAPNSVLYLKGTP
Trigger: TGGAGTCCCTTTGAGATATAGAACTGAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 90 bp GGACTTCCCCGACTTTCATTCTGGTCTCTGGTGTGTGCTTGTCTTTaGTGCTGTCATATTGAGCCAACAAGTCCGGCAAGATTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GLPRLSFWSLVCACL*CCHIEPTSPARFSQ
Trigger: CTGAGAAAATCTTGCCGGACTTGTTGGCTCAATATGACAGCAGCAAAGACAAGCACACACCAGAGACCAGAATGAAAGTCGGGGAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS CCA 90 bp CCTGACGATTCGCATAAGGACTTCCCCGACTTTCATTCTGGTCTCTaGTGTGTGCTTGTCTTTGCTGCTGTCATATTGAGCCAACAAGTC +
Preference number: 5 (lower is better)
Translates to: PDDSHKDFPDFHSGL*CVLVFAAVILSQQV
Trigger: GACTTGTTGGCTCAATATGACAGCAGCAAAGACAAGCACACACCAGAGACCAGAATGAAAGTCGGGGAAGTCCTTATGCGAATCGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS-3UTR CAA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGTTGGGTTTACCTGGATaGAAATTAGCTGCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLLGLPG*KLAARR
Trigger: CCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAA...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTTGTACAGTCTTCGAGTaGCATCGGGGGCAGCATCAA +
Preference number: 5 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSCTVFE*HRGQHQ
Trigger: TTGATGCTGCCCCCGATGCAACTCGAAGACTGTACA...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAACATTCAGAAGGGCCTaGCAGCTGGTGTACAGTCTT +
Preference number: 5 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLTFRRA*QLVYSL
Trigger: AAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAGCTGGAGCAAATACTTaGCTGCCAAATGTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKAGANT*LPNVGV
Trigger: AACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGC...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGCTTTCAGGCTGGCAATaGCCTTCTTCCTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEELSGWQ*PSSFPA
Trigger: AGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAG...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCCATGGGTAGAGATGGTGATGCGGAGATCAACAGCGAGTTCTTGGATGACCGGGAACAGCAAAATCACTaGACTTCAACTGAACAGCTC +
Preference number: 5 (lower is better)
Translates to: SMGRDGDAEINSEFLDDREQQNH*TSTEQL
Trigger: GAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTTC...CCGGTCATCCAAGAACTCGCTGTTGATCTCCGCATCACCATCTCTACCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAATCAACAGCGAGTTCTaGGATGACCGGATCAGGGTA +
Preference number: 5 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLINSEF*DDRIRV
Trigger: TACCCTGATCCGGTCATCCAAGAACTCGCTGTTGAT...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGACTTCACCATCTGTTTaGGCCACAGCAATCAGGCAA +
Preference number: 5 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLTSPSV*ATAIRQ
Trigger: TTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGT...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCAGTCACTCGAGCTTTaGGAAACTGCGTTTTGGTTC +
Preference number: 5 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFQSLEL*ETAFWF
Trigger: GAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTG...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp TATTTCTTACCACCTGCTCCTTCCAAAATGCCCCGGACTACTGCCTaGACACCATTAGGTCTCATTAACCTTTCAGAGAGCAGCTGTCCA +
Preference number: 5 (lower is better)
Translates to: YFLPPAPSKMPRTTA*TPLGLINLSESSCP
Trigger: TGGACAGCTGCTCTCTGAAAGGTTAATGAGACCTAATGGTGTTCAGGCAGTAGTCCGGGGCATTTTGGAAGGAGCAGGTGGTAAGAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564180.1
CDS GCA 90 bp TTCCAAGAATATCTTGAGAAGCTTCTCTTGCATCTCAAGGGCTTTTaGTTCTCTCTGCTCTATCCAGTGGGAAAGAGTACGCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: FQEYLEKLLLHLKGF*FSLLYPVGKSTQGS
Trigger: GCTGCCCTGCGTACTCTTTCCCACTGGATAGAGCAGAGAGAAGCAAAAGCCCTTGAGATGCAAGAGAAGCTTCTCAAGATATTCTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 90 bp CTTCCCCGACTTTCATTCTGGTCTCTGGTGTGTGCTTGTCTTTGCTaGTGTCATATTGAGCCAACAAGTCCGGCAAGATTTTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LPRLSFWSLVCACLC*CHIEPTSPARFSQD
Trigger: ATCCTGAGAAAATCTTGCCGGACTTGTTGGCTCAATATGACAGCAGCAAAGACAAGCACACACCAGAGACCAGAATGAAAGTCGGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS-3UTR CAA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTTCCGGAGTCCTAGGGTaGGGTTTACCTGGATTGAAA +
Preference number: 5 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSSGVLG*GLPGLK
Trigger: TTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGA...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGGTTAGCAGTTTTCTTTaGGTTGGGCAGAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLVSSFL*VGQNPS
Trigger: ACTGGGATTCTGCCCAACCAAAAGAAAACTGCTAAC...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACGCATCTCAAGGGCTTTaGCTTCTCTCTGCTCTATCC +
Preference number: 5 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHASQGL*LLSALS
Trigger: GGATAGAGCAGAGAGAAGCAAAAGCCCTTGAGATGC...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGTTTGCTGCTGTCATATaGAGCCAACAAGTCCGGCAA +
Preference number: 5 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEEFAAVI*SQQVRQ
Trigger: TTGCCGGACTTGTTGGCTCAATATGACAGCAGCAAA...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GGTGGCCAACCGCTTCTCCTCAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCAAGGTTCTCGGTACTTaGAGACCATGTCTCCTAATG +
Preference number: 5 (lower is better)
Translates to: GGQPLLLKFQESGQLVKFKVLGT*RPCLLM
Trigger: CATTAGGAGACATGGTCTCAAAGTACCGAGAACCTT...GAATTTCACTAATTGCCCACTCTCTTGGAACTTGAGGAGAAGCGGTTGGCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GTGTTGACAACAGAGAGGGCTAATATGAAGCAGCCAGCCAGTATCTCCTTTCTGGGCAGCTCTGCGTACTaGAACTTCACCATCTGTTTT +
Preference number: 5 (lower is better)
Translates to: VLTTERANMKQPASISFLGSSAY*NFTICF
Trigger: AAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCC...CAGAAAGGAGATACTGGCTGGCTGCTTCATATTAGCCCTCTCTGTTGTCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp CAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTTAGAAGAGTCAACCAGCTaGATTGTCCTTTCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: QSLFNSTVFHLDTRGPDLEESTS*IVLSGH
Trigger: ATGCCCAGAAAGGACAATCAAGCTGGTTGACTCTTC...TAAATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GAGCTAACACTGGCTGGAGCAAATACTTTGCTGCCAAATGTGGGCGTTCTCTTGGGCAACTCTCTGAAATaGTCGTGCTGTCAATTTATC +
Preference number: 5 (lower is better)
Translates to: ELTLAGANTLLPNVGVLLGNSLK*SCCQFI
Trigger: GATAAATTGACAGCACGACAATTTCAGAGAGTTGCC...CAAGAGAACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGCCAGTGTTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CAA 90 bp GCAAAGCTGAGGACTGATCAAGCATCTCTGGGTTGGCCTCATCAAGGTGTTGACTCACTAATGGCCTCTTaGATGGTAATCATAATGCCA +
Preference number: 5 (lower is better)
Translates to: AKLRTDQASLGWPHQGVDSLMAS*MVIIMP
Trigger: TGGCATTATGATTACCATCAAAGAGGCCATTAGTGA...GTCAACACCTTGATGAGGCCAACCCAGAGATGCTTGATCAGTCCTCAGCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCTTCTCTTAACTGTACACCCCTCAGGCTGAACGCGGGAGTGCTGAACACATGCTTTTCCAAGAATATCTaGAGAAGCTTCTCTTGCATC +
Preference number: 5 (lower is better)
Translates to: SSLNCTPLRLNAGVLNTCFSKNI*RSFSCI
Trigger: GATGCAAGAGAAGCTTCTCAAGATATTCTTGGAAAA...GCATGTGTTCAGCACTCCCGCGTTCAGCCTGAGGGGTGTACAGTTAAGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp ATCAGAGCCTCTTCAACTCCACAGTTTTCCATCTCGACACCAGAGGACCAGATTGGGCAACCCCCTGAATaGCAGATAGATATACAAAAG +
Preference number: 5 (lower is better)
Translates to: IRASSTPQFSISTPEDQIGQPPE*QIDIQK
Trigger: CTTTTGTATATCTATCTGCAATTCAGGGGGTTGCCC...AATCTGGTCCTCTGGTGTCGAGATGGAAAACTGTGGAGTTGAAGAGGCTCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 90 bp AACTTCCGGAGTCCTAGGGTTGGGTTTACCTGGATTGAAATTAGCTaGAAGGCGGATCATGGTTTCCTTCAAGCACAAAAGCAACAACAA +
Preference number: 5 (lower is better)
Translates to: NFRSPRVGFTWIEIS*KADHGFLQAQKQQQ
Trigger: TTGTTGTTGCTTTTGTGCTTGAAGGAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CCA 90 bp CCACAAGAAGAGTCTGATGTTGCTCTAATTCCAAGAGGCTCTTGCTaGAGAAGGGCTCAGTTTTTAACTCTGTTTCATTTTCCGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PQEESDVALIPRGSC*RRAQFLTLFHFPRP
Trigger: TGGCCTCGGAAAATGAAACAGAGTTAAAAACTGAGCCCTTCTCCAGCAAGAGCCTCTTGGAATTAGAGCAACATCAGACTCTTCTTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GATAATCAGGGCAACTCTCTGCAAACAGCAGCAGGAGTGAAGAAGAATGGCCTGAAGCAACAACAAGGTTaGAGAGGTAAAACTCCAAGT +
Preference number: 5 (lower is better)
Translates to: DNQGNSLQTAAGVKKNGLKQQQG*RGKTPS
Trigger: ACTTGGAGTTTTACCTCTCAAACCTTGTTGTTGCTT...CAGGCCATTCTTCTTCACTCCTGCTGCTGTTTGCAGAGAGTTGCCCTGATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACAAGAGGCCAAAATCTTaGCGATCAGGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: FSHSSFWKLRFGSCGSSHKRPKS*RSGHTS
Trigger: AGAAGTGTGACCTGATCGCAAAGATTTTGGCCTCTT...GTGACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp GGAAACTGCGTTTTGGTTCCTGTGGATCTAGTCACCCCAGAGAGCGTGATAAAAGGCAACTCTCTGAAATaGTCGTGCTGTCAATTTATC +
Preference number: 5 (lower is better)
Translates to: GNCVLVPVDLVTPESVIKGNSLK*SCCQFI
Trigger: GATAAATTGACAGCACGACAATTTCAGAGAGTTGCC...TTTTATCACGCTCTCTGGGGTGACTAGATCCACAGGAACCAAAACGCAGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TATTTTCCCTTCCAGATCTTTTCTGTTCAGTGTACTTTGGGCAGCCATGCTGACGGATCAGGGTATGTGTaGGATACCTTCTCCAACAGA +
Preference number: 5 (lower is better)
Translates to: YFPFQIFSVQCTLGSHADGSGYV*DTFSNR
Trigger: TCTGTTGGAGAAGGTATCCAACACATACCCTGATCC...GTCAGCATGGCTGCCCAAAGTACACTGAACAGAAAAGATCTGGAAGGGAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000561856.1
CDS-3UTR CAA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTTTTGGAAACTGCGTTTaGGTTCCTGTGGATCTAGTC +
Preference number: 5 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSFGNCV*VPVDLV
Trigger: GACTAGATCCACAGGAACCAAAACGCAGTTTCCAAA...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TGGCCAGTTCTGCTCCTCATTTTCCTGAAGAAGAATCTCAGCCTGAAAGAATATAAAACACACCACGTCTaGAACGACGGCACCAAATTC +
Preference number: 5 (lower is better)
Translates to: WPVLLLIFLKKNLSLKEYKTHHV*NDGTKF
Trigger: GAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTTT...ATATTCTTTCAGGCTGAGATTCTTCTTCAGGAAAATGAGGAGCAGAACTGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCCCCAGAATCCATAATAAGATTTCTTGGCAAAGTGACCTTATGTGAGACACACGCTGGAGCAAATACTTaGCTGCCAAATGTGGGCGTT +
Preference number: 5 (lower is better)
Translates to: SPESIIRFLGKVTLCETHAGANT*LPNVGV
Trigger: AACGCCCACATTTGGCAGCAAAGTATTTGCTCCAGC...GTGTGTCTCACATAAGGTCACTTTGCCAAGAAATCTTATTATGGATTCTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CAA 90 bp ACCACGTACACCTTAAACACATCCTCAATGCATCTACTAAGTTCTTCTTCTGTCCTTTCAGGCTGGCAATaGCCTTCTTCCTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: TTYTLNTSSMHLLSSSSVLSGWQ*PSSFPA
Trigger: AGCTGGAAAGGAAGAAGGCAATTGCCAGCCTGAAAG...GACAGAAGAAGAACTTAGTAGATGCATTGAGGATGTGTTTAAGGTGTACGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565852.1
CDS-3UTR CAA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAATCATAATGCCACCTaGAGTGGCAACTCTAAACTG +
Preference number: 5 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSNHNAT*SGNSKL
Trigger: CAGTTTAGAGTTGCCACTCAAGGTGGCATTATGATT...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGATCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTGAACAGCAAAATCACTaGACTTCAACTGAACAGCTC +
Preference number: 5 (lower is better)
Translates to: RSFSHSSFWKLRFGSCGSEQQNH*TSTEQL
Trigger: GAGCTGTTCAGTTGAAGTCAAGTGATTTTGCTGTTC...AGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp AGAAGAATGGCCTGGGAGGATAAATACAGGGCTTACCCTTCTTCTCTGGAAGAGAGATTCTTCTTAGATTaGAAAGCCACAATGCCCATT +
Preference number: 5 (lower is better)
Translates to: RRMAWEDKYRAYPSSLEERFFLD*KATMPI
Trigger: AATGGGCATTGTGGCTTTCAAATCTAAGAAGAATCT...CTCTTCCAGAGAAGAAGGGTAAGCCCTGTATTTATCCTCCCAGGCCATTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS-3UTR CAA 90 bp TCCTTCAGTCACTCGAGCTTTTGGAAACTGCGTTTTGGTTCCTGTGGATCTAGTAAACAAGCATTTTTATaGTACATCCAGCTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: SFSHSSFWKLRFGSCGSSKQAFL*YIQLAQ
Trigger: TTGGGCCAGCTGGATGTACAATAAAAATGCTTGTTT...ACTAGATCCACAGGAACCAAAACGCAGTTTCCAAAAGCTCGAGTGACTGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 90 bp GCCTTATCAGCAATTTCATCTCTTAGGAGTTTCAGATTCTTCCACTaGGGATCCTTCAGAAACTTGTCCTCCAAAGCAGACAGGTTAGAT +
Preference number: 5 (lower is better)
Translates to: ALSAISSLRSFRFFH*GSFRNLSSKADRLD
Trigger: ATCTAACCTGTCTGCTTTGGAGGACAAGTTTCTGAAGGATCCTCAGTGGAAGAATCTGAAACTCCTAAGAGATGAAATTGCTGATAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS-3UTR CAA 90 bp CAAGTTCCAAGAGAGTGGGCAATTAGTGAAATTCCATCAGTCATGTTAAAATATGTGCTATATCTGAAATaGTTTCAACAGCCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: QVPREWAISEIPSVMLKYVLYLK*FQQPWH
Trigger: ATGCCAGGGCTGTTGAAACAATTTCAGATATAGCAC...ATATTTTAACATGACTGATGGAATTTCACTAATTGCCCACTCTCTTGGAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 72 bp AGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATGACTaGAGTGTAACACCACGCTCGCGACCCGCTCAGGCG +
Preference number: 6 (lower is better)
Translates to: SPAAHGLSGRHD*SVTPRSRPAQA
Trigger: CGCCTGAGCGGGTCGCGAGCGTGGTGTTACACTCCAGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 72 bp CCTGAGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATaGCTGGAGTGTAACACCACGCTCGCGACCCGCTCA +
Preference number: 6 (lower is better)
Translates to: PEPRCPRPVGPP*LECNTTLATRS
Trigger: TGAGCGGGTCGCGAGCGTGGTGTTACACTCCAGTCATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 72 bp AATGCCTCCAAAATCCGATCCAGACCGCATGTCTCCTaGGCCCCGCTGCCCACGGCCTGTCGGGCCGCCATG +
Preference number: 6 (lower is better)
Translates to: NASKIRSRPHVS*APLPTACRAAM
Trigger: CATGGCGGCCCGACAGGCCGTGGGCAGCGGGGCTCAGGAGACATGCGGTCTGGATCGGATTTTGGAGGCATT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000564180.1
ENST00000565037.1
CDS GCA 72 bp CCGCATTCCTGGCAGTGGGACAGCAAGTCCCCGAGATaGTCCACCCGGCCCTGCTCAGAGGATACCTTCTGG +
Preference number: 6 (lower is better)
Translates to: PHSWQWDSKSPR*STRPCSEDTFW
Trigger: CCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 72 bp ATGAAGAAGTCTCCTGCCAAACCGCATTCCTGGCAGTaGGACAGCAAGTCCCCGAGATGCTCCACCCGGCCC +
Preference number: 6 (lower is better)
Translates to: MKKSPAKPHSWQ*DSKSPRCSTRP
Trigger: GGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CCA 72 bp GCAGAAAGTCCAGCCTCTGGCACAGCTCCCCAAGGTTaGCCAAGCTGCTGGCCCTGTGAGCACCATCAGGAT +
Preference number: 6 (lower is better)
Translates to: AESPASGTAPQG*PSCWPCEHHQD
Trigger: ATCCTGATGGTGCTCACAGGGCCAGCAGCTTGGCCAACCTTGGGGAGCTGTGCCAGAGGCTGGACTTTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS GCA 72 bp TGGGACAGCAAGTCCCCGAGATGCTCCACCCGGCCCTaGTCAGAGGATACCTTCTGGTACAGGGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: WDSKSPRCSTRP*SEDTFWYRASS
Trigger: AGATGAAGCCCTGTACCAGAAGGTATCCTCTGAGCAGGGCCGGGTGGAGCATCTCGGGGACTTGCTGTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000562491.1
CDS GCA 72 bp CAAGACTCCGTCTCCCGGGCTCAGCAGCAGCTTCAATaGCTCCAAAATCCGATCCAGACCGCATGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: QDSVSRAQQQLQ*LQNPIQTACLL
Trigger: CAGGAGACATGCGGTCTGGATCGGATTTTGGAGGCATTGAAGCTGCTGCTGAGCCCGGGAGACGGAGTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565037.1
CDS CAA 90 bp TTCATGATGTCATCCAGCTCTTCTAGGGCCAACTGGGCATGGAGCTaGGCCACGTCATCGGGCTCCAGACACACTACGTGCTTCAGCAGG +
Preference number: 6 (lower is better)
Translates to: FMMSSSSSRANWAWS*ATSSGSRHTTCFSR
Trigger: CCTGCTGAAGCACGTAGTGTGTCTGGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGTTGGCCCTAGAAGAGCTGGATGACATCATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000561931.1
CDS CCA 72 bp CCCAGTTGGCACAGACCTGCTGCGATATCCCCAAAGTaGTGGCAGAAGATCAAGCTCCCCAGAGATGTGTGC +
Preference number: 6 (lower is better)
Translates to: PSWHRPAAISPK*WQKIKLPRDVC
Trigger: GCACACATCTCTGGGGAGCTTGATCTTCTGCCACCACTTTGGGGATATCGCAGCAGGTCTGTGCCAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CCA 72 bp CAGAAGATGAAGAAGTCTCCTGCCAAACCGCATTCCTaGCAGTGGGACAGCAAGTCCCCGAGATGCTCCACC +
Preference number: 6 (lower is better)
Translates to: QKMKKSPAKPHS*QWDSKSPRCST
Trigger: GGTGGAGCATCTCGGGGACTTGCTGTCCCACTGCCAGGAATGCGGTTTGGCAGGAGACTTCTTCATCTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CAA 72 bp GGGCTCAGGGCAGGAGCAACTTCCGGAGTCCTAGGGTaGGGTTTACCTGGATTGAAATTAGCTGCAAGGCGG +
Preference number: 6 (lower is better)
Translates to: GLRAGATSGVLG*GLPGLKLAARR
Trigger: CCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCTGCCCTGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS GCA 72 bp CAGAAGGGCCTTGCAGCTGGTGTACAGTCTTCGAGTTaGATCGGGGGCAGCATCAAAACACACCACGTCTTG +
Preference number: 6 (lower is better)
Translates to: QKGLAAGVQSSS*IGGSIKTHHVL
Trigger: CAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 72 bp CCAGAGATGTGTGCTGAGCAACATTCAGAAGGGCCTTaGAGCTGGTGTACAGTCTTCGAGTTGCATCGGGGG +
Preference number: 6 (lower is better)
Translates to: PEMCAEQHSEGP*SWCTVFELHRG
Trigger: CCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGTTGCTCAGCACACATCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CAA 90 bp AGTGCATCGGGGCTCAGGGCAGGAGCAACTTCCGGAGTCCTAGGGTaGGGTTTACCTGGATTGAAATTAGCTGCAAGGCGGATCATGGTT +
Preference number: 6 (lower is better)
Translates to: SASGLRAGATSGVLG*GLPGLKLAARRIMV
Trigger: AACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCTGCCCTGAGCCCCGATGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CAA 90 bp GAGCAACATTCAGAAGGGCCTTGCAGCTGGTGTACAGTCTTCGAGTaGCATCGGGGGCAGCATCAAAACACACCACGTCTTGAACGACGG +
Preference number: 6 (lower is better)
Translates to: EQHSEGPCSWCTVFE*HRGQHQNTPRLERR
Trigger: CCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CCA 72 bp ATGTGTGCTGAGCAACATTCAGAAGGGCCTTGCAGCTaGTGTACAGTCTTCGAGTTGCATCGGGGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: MCAEQHSEGPCS*CTVFELHRGQH
Trigger: ATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGAATGTTGCTCAGCACACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CCA 72 bp TTTTTCATGATGTCATCCAGCTCTTCTAGGGCCAACTaGGCATGGAGCTTGGCCACGTCATCGGGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: FFMMSSSSSRAN*AWSLATSSGSR
Trigger: TCTGGAGCCCGATGACGTGGCCAAGCTCCATGCCCAGTTGGCCCTAGAAGAGCTGGATGACATCATGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000561931.1
CDS CAA 72 bp TCAGAAGGGCCTTGCAGCTGGTGTACAGTCTTCGAGTaGCATCGGGGGCAGCATCAAAACACACCACGTCTT +
Preference number: 6 (lower is better)
Translates to: SEGPCSWCTVFE*HRGQHQNTPRL
Trigger: AAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACTGTACACCAGCTGCAAGGCCCTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 72 bp TTTGGTTGGGCAGAATCCCAGTTGGCACAGACCTGCTaGGATATCCCCAAAGTGGTGGCAGAAGATCAAGCT +
Preference number: 6 (lower is better)
Translates to: FGWAESQLAQTC*DIPKVVAEDQA
Trigger: AGCTTGATCTTCTGCCACCACTTTGGGGATATCGCAGCAGGTCTGTGCCAACTGGGATTCTGCCCAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 72 bp ATGGGCCAGGCTTGCACAGGCTCTCTGCAATGTTGCTaGTACAAAGTCCACCACCTGAGTGACGTTTGTGAA +
Preference number: 6 (lower is better)
Translates to: MGQACTGSLQCC*YKVHHLSDVCE
Trigger: TTCACAAACGTCACTCAGGTGGTGGACTTTGTAGCAGCAACATTGCAGAGAGCCTGTGCAAGCCTGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 72 bp CCCGAAGCAGCAGCACAACCACATGTATGGCAGCTCTaGGTACTTGAACTTCACCATCTGTTTTGGCCACAG +
Preference number: 6 (lower is better)
Translates to: PEAAAQPHVWQL*VLELHHLFWPQ
Trigger: CTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGCTGCTGCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261778.2
ENST00000561931.1
ENST00000562000.5
ENST00000568361.5
CDS CAA 72 bp GTGAAAGAGACTGCTGGGGACAAGAGGCCAAAATCTTaGCGATCAGGTCACACTTCTTCCAGTCAGCAGCCG +
Preference number: 6 (lower is better)
Translates to: VKETAGDKRPKS*RSGHTSSSQQP
Trigger: CGGCTGCTGACTGGAAGAAGTGTGACCTGATCGCAAAGATTTTGGCCTCTTGTCCCCAGCAGTCTCTTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CAA 90 bp TCCCCGAAGCAGCAGCACAACCACATGTATGGCAGCTCTGCGTACTaGAACTTCACCATCTGTTTTGGCCACAGCAATCAGGCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: SPKQQHNHMYGSSAY*NFTICFGHSNQASC
Trigger: ACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGCTGCTGCTTCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261778.2
ENST00000561931.1
ENST00000562000.5
ENST00000568361.5
CDS CAA 90 bp AATTCTCTGGTGAAAGAGACTGCTGGGGACAAGAGGCCAAAATCTTaGCGATCAGGTCACACTTCTTCCAGTCAGCAGCCGTCACCTCAG +
Preference number: 6 (lower is better)
Translates to: NSLVKETAGDKRPKS*RSGHTSSSQQPSPQ
Trigger: CTGAGGTGACGGCTGCTGACTGGAAGAAGTGTGACCTGATCGCAAAGATTTTGGCCTCTTGTCCCCAGCAGTCTCTTTCACCAGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CAA 90 bp TCTGCTCTATCCAGTGGGAAAGAGTACGCAGGGCAGCAGCCCGTGTaGGAATTTGAGGGTCATAAGCTGACAAAAGAACCTCTTGGAGCT +
Preference number: 6 (lower is better)
Translates to: SALSSGKEYAGQQPV*EFEGHKLTKEPLGA
Trigger: AGCTCCAAGAGGTTCTTTTGTCAGCTTATGACCCTCAAATTCCAACACGGGCTGCTGCCCTGCGTACTCTTTCCCACTGGATAGAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 72 bp AGCAGCTTCCGCTCTTGGCCTTCCACAAGAAGAGTCTaGTGTTGCTCTAATTCCAAGAGGCTCTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: SSFRSWPSTRRV*CCSNSKRLLLE
Trigger: CTCCAGCAAGAGCCTCTTGGAATTAGAGCAACATCAGACTCTTCTTGTGGAAGGCCAAGAGCGGAAGCTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS GCA 72 bp TCTTTTGGTTGGGCAGAATCCCAGTTGGCACAGACCTaGTGCGATATCCCCAAAGTGGTGGCAGAAGATCAA +
Preference number: 6 (lower is better)
Translates to: SFGWAESQLAQT*CDIPKVVAEDQ
Trigger: TTGATCTTCTGCCACCACTTTGGGGATATCGCAGCAGGTCTGTGCCAACTGGGATTCTGCCCAACCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 72 bp CAGAGAATGGAGAGAGGGCACAGCTTTGTCCAACCCTaGAAATCCTTTCAGGCTGGCAATTGCCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: QRMERGHSFVQP*KSFQAGNCLLP
Trigger: AGGAAGAAGGCAATTGCCAGCCTGAAAGGATTTGCAGGGTTGGACAAAGCTGTGCCCTCTCTCCATTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000562491.1
CDS GCA 72 bp AGCTTCTCTTGCATCTCAAGGGCTTTTGCTTCTCTCTaGTCTATCCAGTGGGAAAGAGTACGCAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: SFSCISRAFASL*SIQWERVRRAA
Trigger: TGCTGCCCTGCGTACTCTTTCCCACTGGATAGAGCAGAGAGAAGCAAAAGCCCTTGAGATGCAAGAGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CAA 72 bp TCCAGTGGGAAAGAGTACGCAGGGCAGCAGCCCGTGTaGGAATTTGAGGGTCATAAGCTGACAAAAGAACCT +
Preference number: 6 (lower is better)
Translates to: SSGKEYAGQQPV*EFEGHKLTKEP
Trigger: AGGTTCTTTTGTCAGCTTATGACCCTCAAATTCCAACACGGGCTGCTGCCCTGCGTACTCTTTCCCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS CAA 90 bp AGGGCAGGAGCAACTTCCGGAGTCCTAGGGTTGGGTTTACCTGGATaGAAATTAGCTGCAAGGCGGATCATGGTTTCCTTCAAGCACAAA +
Preference number: 6 (lower is better)
Translates to: RAGATSGVLGLGLPG*KLAARRIMVSFKHK
Trigger: TTTGTGCTTGAAGGAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CAA 90 bp CAGTCTTCGAGTTGCATCGGGGGCAGCATCAAAACACACCACGTCTaGAACGACGGCACCAAATTCAGTTCTATATCTCAAAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: QSSSCIGGSIKTHHV*NDGTKFSSISQRDS
Trigger: GGAGTCCCTTTGAGATATAGAACTGAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACTCGAAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS TCA 72 bp TACAAACTGCAAAACGAACTGGACAGTCTTCTGTTGTaGGATACTAAGTGCATCGGGGCTCAGGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: YKLQNELDSLLL*DTKCIGAQGRS
Trigger: GCTCCTGCCCTGAGCCCCGATGCACTTAGTATCTCACAACAGAAGACTGTCCAGTTCGTTTTGCAGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS TCA 72 bp GGCAGCAGCCCGTGTTGGAATTTGAGGGTCATAAGCTaGCAAAAGAACCTCTTGGAGCTGTTCTGTGGTTAC +
Preference number: 6 (lower is better)
Translates to: GSSPCWNLRVIS*QKNLLELFCGY
Trigger: GTAACCACAGAACAGCTCCAAGAGGTTCTTTTGTCAGCTTATGACCCTCAAATTCCAACACGGGCTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 72 bp AGCAGCACAACCACATGTATGGCAGCTCTGCGTACTTaGACTTCACCATCTGTTTTGGCCACAGCAATCAGG +
Preference number: 6 (lower is better)
Translates to: SSTTTCMAALRT*TSPSVLATAIR
Trigger: CCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261778.2
ENST00000561931.1
ENST00000562000.5
ENST00000568361.5
CDS CCA 72 bp AGGAGCAACTTCCGGAGTCCTAGGGTTGGGTTTACCTaGATTGAAATTAGCTGCAAGGCGGATCATGGTTTC +
Preference number: 6 (lower is better)
Translates to: RSNFRSPRVGFT*IEISCKADHGF
Trigger: GAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CCA 72 bp GCACCATCAGGATCTCTCACTCCCCTCAGGAAGGTATaGATCAAAGGTTCTCGGTACTTTGAGACCATGTCT +
Preference number: 6 (lower is better)
Translates to: APSGSLTPLRKV*IKGSRYFETMS
Trigger: AGACATGGTCTCAAAGTACCGAGAACCTTTGATCCATACCTTCCTGAGGGGAGTGAGAGATCCTGATGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS CCA 72 bp TGGCAGCTCTGCGTACTTGAACTTCACCATCTGTTTTaGCCACAGCAATCAGGCAAGCTGTTACCTCATGGA +
Preference number: 6 (lower is better)
Translates to: WQLCVLELHHLF*PQQSGKLLPHG
Trigger: TCCATGAGGTAACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000562000.5
ENST00000568361.5
CDS CCA 72 bp TGGCAGCTCTGCGTACTTGAACTTCACCATCTGTTTTaGCCACAGCAATCAGGCAAGCTGTTACCTTCTCAC +
Preference number: 6 (lower is better)
Translates to: WQLCVLELHHLF*PQQSGKLLPSH
Trigger: GTGAGAAGGTAACAGCTTGCCTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561931.1
CDS CAA 72 bp GCAACTTCCGGAGTCCTAGGGTTGGGTTTACCTGGATaGAAATTAGCTGCAAGGCGGATCATGGTTTCCTTC +
Preference number: 6 (lower is better)
Translates to: ATSGVLGLGLPG*KLAARRIMVSF
Trigger: GAAGGAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACTCCGGAAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS CAA 72 bp CAGCAGCACAACCACATGTATGGCAGCTCTGCGTACTaGAACTTCACCATCTGTTTTGGCCACAGCAATCAG +
Preference number: 6 (lower is better)
Translates to: QQHNHMYGSSAY*NFTICFGHSNQ
Trigger: CTGATTGCTGTGGCCAAAACAGATGGTGAAGTTCAAGTACGCAGAGCTGCCATACATGTGGTTGTGCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261778.2
ENST00000561931.1
ENST00000562000.5
ENST00000568361.5
CDS CAA 90 bp TCCTCTTCAGTTAGAACCTCTTCTGCAGGTGTTAGCAGTTTTCTTTaGGTTGGGCAGAATCCCAGTTGGCACAGACCTGCTGCGATATCC +
Preference number: 6 (lower is better)
Translates to: SSSVRTSSAGVSSFL*VGQNPSWHRPAAIS
Trigger: GGATATCGCAGCAGGTCTGTGCCAACTGGGATTCTGCCCAACCAAAAGAAAACTGCTAACACCTGCAGAAGAGGTTCTAACTGAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CAA 72 bp GTTAGAACCTCTTCTGCAGGTGTTAGCAGTTTTCTTTaGGTTGGGCAGAATCCCAGTTGGCACAGACCTGCT +
Preference number: 6 (lower is better)
Translates to: VRTSSAGVSSFL*VGQNPSWHRPA
Trigger: AGCAGGTCTGTGCCAACTGGGATTCTGCCCAACCAAAAGAAAACTGCTAACACCTGCAGAAGAGGTTCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS TCA 72 bp GTTGCATCGGGGGCAGCATCAAAACACACCACGTCTTaGACGACGGCACCAAATTCAGTTCTATATCTCAAA +
Preference number: 6 (lower is better)
Translates to: VASGAASKHTTS*TTAPNSVLYLK
Trigger: TTTGAGATATAGAACTGAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CAA 72 bp AGTTGCATCGGGGGCAGCATCAAAACACACCACGTCTaGAACGACGGCACCAAATTCAGTTCTATATCTCAA +
Preference number: 6 (lower is better)
Translates to: SCIGGSIKTHHV*NDGTKFSSISQ
Trigger: TTGAGATATAGAACTGAATTTGGTGCCGTCGTTCAAGACGTGGTGTGTTTTGATGCTGCCCCCGATGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS GCA 72 bp AGTCCTAGGGTTGGGTTTACCTGGATTGAAATTAGCTaGAAGGCGGATCATGGTTTCCTTCAAGCACAAAAG +
Preference number: 6 (lower is better)
Translates to: SPRVGFTWIEIS*KADHGFLQAQK
Trigger: CTTTTGTGCTTGAAGGAAACCATGATCCGCCTTGCAGCTAATTTCAATCCAGGTAAACCCAACCCTAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1
CDS GCA 72 bp TATCTTGAGAAGCTTCTCTTGCATCTCAAGGGCTTTTaGTTCTCTCTGCTCTATCCAGTGGGAAAGAGTACG +
Preference number: 6 (lower is better)
Translates to: YLEKLLLHLKGF*FSLLYPVGKST
Trigger: CGTACTCTTTCCCACTGGATAGAGCAGAGAGAAGCAAAAGCCCTTGAGATGCAAGAGAAGCTTCTCAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261778.2
CDS TCA 72 bp GTTTACGATCAAAAGGCAAATAAACCAGTCACCCTGTaGTGGGATGAACGCAGAGATGCTGAAAACCATCTC +
Preference number: 6 (lower is better)
Translates to: VYDQKANKPVTL*WDERRDAENHL
Trigger: GAGATGGTTTTCAGCATCTCTGCGTTCATCCCATCACAGGGTGACTGGTTTATTTGCCTTTTGATCGTAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568361.5
CDS CAA 72 bp AGACGTCTGACAGCAGGGCAACCCCTTTTTCATCCATaGCAGATGGAGCTATTTGGTTTGAATCATAAGTCT +
Preference number: 6 (lower is better)
Translates to: RRLTAGQPLFHP*QMELFGLNHKS
Trigger: AGACTTATGATTCAAACCAAATAGCTCCATCTGCAATGGATGAAAAAGGGGTTGCCCTGCTGTCAGACGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562000.5
CDS CCA 72 bp CAGATACCCAAGGTAACTACAAACTGCAAAACGAACTaGACAGTCTTCTGTTGTGAGATACTAAGTGCATCG +
Preference number: 6 (lower is better)
Translates to: QIPKVTTNCKTN*TVFCCEILSAS
Trigger: CGATGCACTTAGTATCTCACAACAGAAGACTGTCCAGTTCGTTTTGCAGTTTGTAGTTACCTTGGGTATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261778.2
ENST00000561566.1
ENST00000564180.1
CDS CAA 72 bp ACTAATGGCCTCTTTGATGGTAATCATAATGCCACCTaGAGTGGCAACTCTAAACTGACACAGAGAATGGAG +
Preference number: 6 (lower is better)
Translates to: TNGLFDGNHNAT*SGNSKLTQRME
Trigger: CTCCATTCTCTGTGTCAGTTTAGAGTTGCCACTCAAGGTGGCATTATGATTACCATCAAAGAGGCCATTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000562491.1
CDS CAA 72 bp TTGAGAGGTAAAACTCCAAGTGACATCCACAGAGTTTaGTGGCCATTCTGCCTTATCAGCAATTTCATCTCT +
Preference number: 6 (lower is better)
Translates to: LRGKTPSDIHRV*WPFCLISNFIS
Trigger: AGAGATGAAATTGCTGATAAGGCAGAATGGCCACAAAACTCTGTGGATGTCACTTGGAGTTTTACCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261778.2
ENST00000564180.1