RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162367

Ensembl transcript IDs: ENST00000294339.3, ENST00000371884.6, ENST00000459729.1, ENST00000464796.5, ENST00000465912.1, ENST00000481091.1

Found 550 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCGCCTTGCTTCAGAGCCGCCCAATTCTCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAGCCTAAGAACGCCCTCCTGGCTGAT +
Preference number: 1 (lower is better)
Translates to: PPPCFRAAQFSPHLP*SPPSQQPKNALLAD
Trigger: ATCAGCCAGGAGGGCGTTCTTAGGCTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATTGGGCGGCTCTGAAGCAAGGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp CCCAAATGCTGGGCAGTCAGGCACACCGGCCTACTGCCTAGGTCGTaGACTCAGGCTGCGAAACCCCACTGCAGGATTGAGATTGAGGGA +
Preference number: 1 (lower is better)
Translates to: PKCWAVRHTGLLPRS*TQAAKPHCRIEIEG
Trigger: TCCCTCAATCTCAATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp CAGTACAACGTTGACGGAAAGTGCTGGGCCCGCCCACAGAAACAATaGACTATGTACACGGGCAGGGGGCAAGTCTTCAGCAGAGGGTCA +
Preference number: 1 (lower is better)
Translates to: QYNVDGKCWARPQKQ*TMYTGRGQVFSRGS
Trigger: TGACCCTCTGCTGAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp GGGCTAAAGGCAAGGCAGAGACTGCTGGATGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGAAAGACAGGGATCCCAAACTCCAGG +
Preference number: 1 (lower is better)
Translates to: GLKARQRLLDASDES*QPQVLGKTGIPNSR
Trigger: CCTGGAGTTTGGGATCCCTGTCTTTCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTGCCTTTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp AATCTAAATTACCCAAATGCTGGGCAGTCAGGCACACCGGCCTACTaGCTAGGTCGTGGACTCAGGCTGCGAAACCCCACTGCAGGATTG +
Preference number: 1 (lower is better)
Translates to: NLNYPNAGQSGTPAY*LGRGLRLRNPTAGL
Trigger: CAATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp TATAAATATGGACAGAAGTGGCCACACAGGCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGGCAGAGACTGCTGGATGCCTCAGAT +
Preference number: 1 (lower is better)
Translates to: YKYGQKWPHRPPQPA*EGLKARQRLLDASD
Trigger: ATCTGAGGCATCCAGCAGTCTCTGCCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGCCTGTGTGGCCACTTCTGTCCATATTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp TTGGGAGGGGCTAAAGGCAAGGCAGAGACTGCTGGATGCCTCAGATaGGAGCTGACAACCCCAGGTCTTAGGAAAGACAGGGATCCCAAA +
Preference number: 1 (lower is better)
Translates to: LGGAKGKAETAGCLR*ELTTPGLRKDRDPK
Trigger: TTTGGGATCCCTGTCTTTCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTGCCTTTAGCCCCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp ATCATCTTCTTCAACCAGGCCCTGAAGAAGGCACCTCGAGGCTTGTaGCTCTGCAGCATCTGGCAAGCTGGATGGATCAACATAGGCCTG +
Preference number: 1 (lower is better)
Translates to: IIFFNQALKKAPRGL*LCSIWQAGWINIGL
Trigger: CAGGCCTATGTTGATCCATCCAGCTTGCCAGATGCTGCAGAGTCACAAGCCTCGAGGTGCCTTCTTCAGGGCCTGGTTGAAGAAGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp CACAGGCTTAGGAAGGCAAGTCTCATTGGGGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTAAGGGCGACTGGGTTTCCTGACCCT +
Preference number: 1 (lower is better)
Translates to: HRLRKASLIGEKAEL*SPGQEVRATGFPDP
Trigger: AGGGTCAGGAAACCCAGTCGCCCTTACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTCCTAAGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp AACATAGGCCTGGGTGAAGATGGGGCTCACGAAATGGGCAGCTATTaGGTACCTATAAATATGGACAGAAGTGGCCACACAGGCCACCCC +
Preference number: 1 (lower is better)
Translates to: NIGLGEDGAHEMGSY*VPINMDRSGHTGHP
Trigger: GGGGTGGCCTGTGTGGCCACTTCTGTCCATATTTATAGGTACCCAATAGCTGCCCATTTCGTGAGCCCCATCTTCACCCAGGCCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp ACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTaGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGG +
Preference number: 1 (lower is better)
Translates to: TNAIHHIQYNVDGKC*ARPQKQCTMYTGRG
Trigger: CCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp ACACCCACAGTGTTGGCCTCTGGGCTGTACAAAGGTCAAGGTACCTaGAGCGGTTACTCCTCTTCTGCAGAAAAATGCAGAGACCAACGC +
Preference number: 1 (lower is better)
Translates to: TPTVLASGLYKGQGT*SGYSSSAEKCRDQR
Trigger: GCGTTGGTCTCTGCATTTTTCTGCAGAAGAGGAGTAACCGCTCCAGGTACCTTGACCTTTGTACAGCCCAGAGGCCAACACTGTGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp CGTACGCCCATCAGCACACTGGCATTCACTCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCT +
Preference number: 1 (lower is better)
Translates to: RTPISTLAFTRQHEQ*CRGVEAHMPKISLA
Trigger: AGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTTCATGCTGGCGAGTGAATGCCAGTGTGCTGATGGGCGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp GAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTaGTGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ETNAIHHIQYNVDGK*WARPQKQCTMYTGR
Trigger: CCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp ACTCTGCAGCATCTGGCAAGCTGGATGGATCAACATAGGCCTGGGTaGAGATGGGGCTCACGAAATGGGCAGCTATTGGGTACCTATAAA +
Preference number: 1 (lower is better)
Translates to: TLQHLASWMDQHRPG*RWGSRNGQLLGTYK
Trigger: TTTATAGGTACCCAATAGCTGCCCATTTCGTGAGCCCCATCTTCACCCAGGCCTATGTTGATCCATCCAGCTTGCCAGATGCTGCAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp TCTCCTCTGACCTCGAAGGCAGAGCCTAGAGGGAGAGGGCTAGGGTaGCTTAAGGGTACAATGACAGACATACAGGACTTCTGTGCAATT +
Preference number: 1 (lower is better)
Translates to: SPLTSKAEPRGRGLG*LKGTMTDIQDFCAI
Trigger: AATTGCACAGAAGTCCTGTATGTCTGTCATTGTACCCTTAAGTCACCCTAGCCCTCTCCCTCTAGGCTCTGCCTTCGAGGTCAGAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp CTCAATAACTCAGGCCAAAGCGGTTTACAATCTAAATTACCCAAATaGTGGGCAGTCAGGCACACCGGCCTACTGCCTAGGTCGTGGACT +
Preference number: 1 (lower is better)
Translates to: LNNSGQSGLQSKLPK*WAVRHTGLLPRSWT
Trigger: AGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGATTGTAAACCGCTTTGGCCTGAGTTATTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp AATAACTCAGGCCAAAGCGGTTTACAATCTAAATTACCCAAATGCTaGGCAGTCAGGCACACCGGCCTACTGCCTAGGTCGTGGACTCAG +
Preference number: 1 (lower is better)
Translates to: NNSGQSGLQSKLPKC*AVRHTGLLPRSWTQ
Trigger: CTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGATTGTAAACCGCTTTGGCCTGAGTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp AAAGCAGTGACAACTCCAGCCTCTTACTTGGGAAGGATTTGGGACTaGGGGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTAC +
Preference number: 1 (lower is better)
Translates to: KAVTTPASYLGRIWD*GKREDRAVFTKSTY
Trigger: GTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCCCTCAGTCCCAAATCCTTCCCAAGTAAGAGGCTGGAGTTGTCACTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp AACCAACCTCCCAGACGCACCCTTGATGACCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGG +
Preference number: 1 (lower is better)
Translates to: NQPPRRTLDDQKLHN*GVFKVLLSECAYVW
Trigger: CCAAACATATGCACATTCACTTAGCAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTGGTCATCAAGGGTGCGTCTGGGAGGTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp AATATCTCTTGCTCCATATCACTCTACTATCATTGTCCCTTTCTCTaGCTTCACACAAAGCCCGACAGGGCTTTCTCAGGGCTGCAGACA +
Preference number: 1 (lower is better)
Translates to: NISCSISLYYHCPFL*LHTKPDRAFSGLQT
Trigger: TGTCTGCAGCCCTGAGAAAGCCCTGTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGATATGGAGCAAGAGATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp TCACTCGCCAGCATGAACAGTGATGTCGAGGAGTTGAAGCCCACATaGCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCC +
Preference number: 1 (lower is better)
Translates to: SLASMNSDVEELKPT*PKYLLLHITLLSLS
Trigger: GGACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTTCATGCTGGCGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp CAAACAGCCTTAGATCCTACAGCAATGACTCTATCTTTAGACAGATaGGGCTCCTCACAGGATCTTCCAAACGTTGGAAAGGAACCAACC +
Preference number: 1 (lower is better)
Translates to: QTALDPTAMTLSLDR*GSSQDLPNVGKEPT
Trigger: GGTTGGTTCCTTTCCAACGTTTGGAAGATCCTGTGAGGAGCCCCATCTGTCTAAAGATAGAGTCATTGCTGTAGGATCTAAGGCTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp CTGAAATTGAATGGAGAGCCTGAGTGCTACAAAGGTGAACAATGTTaGCCCAAGCTCGAGAATTGGACCTTACTTAAAAGGAAGGGGAAA +
Preference number: 1 (lower is better)
Translates to: LKLNGEPECYKGEQC*PKLENWTLLKRKGK
Trigger: TTTCCCCTTCCTTTTAAGTAAGGTCCAATTCTCGAGCTTGGGGCAACATTGTTCACCTTTGTAGCACTCAGGCTCTCCATTCAATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp TCTGCCAGTGTTCCCATATCTCTTTTCCATTCTTATTACTGTCCCTaGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGC +
Preference number: 1 (lower is better)
Translates to: SASVPISLFHSYYCP*PWNKIEIKTIWAGC
Trigger: GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTAATAAGAATGGAAAAGAGATATGGGAACACTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 90 bp TTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGTCCTATTaGGCGCTAAAGATTCCACCAATAACTGAAGTCAAGCAAAAATTC +
Preference number: 1 (lower is better)
Translates to: LDFPYPRSEAGSWSY*ALKIPPITEVKQKF
Trigger: GAATTTTTGCTTGACTTCAGTTATTGGTGGAATCTTTAGCGCTCAATAGGACCAGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp AAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTaGCTACTTCTCATTCCTAACTCAAGCGAATCCACGGTGAAGCAA +
Preference number: 1 (lower is better)
Translates to: KYVIHLIKPIHPSIL*LLLIPNSSESTVKQ
Trigger: TTGCTTCACCGTGGATTCGCTTGAGTTAGGAATGAGAAGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 90 bp AGACCTAAAGACTTGCCCTTTCCTACCAGGCTTGTTTTGGGTAGTTaGATTACATTTTACACAGTCTGCCAGTGTTCCCATATCTCTTTT +
Preference number: 1 (lower is better)
Translates to: RPKDLPFPTRLVLGS*ITFYTVCQCSHISF
Trigger: AAAAGAGATATGGGAACACTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 90 bp TCTTACAAAGACCTAAAGACTTGCCCTTTCCTACCAGGCTTGTTTTaGGTAGTTGCATTACATTTTACACAGTCTGCCAGTGTTCCCATA +
Preference number: 1 (lower is better)
Translates to: SYKDLKTCPFLPGLF*VVALHFTQSASVPI
Trigger: TATGGGAACACTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPSPHLP*SPPSQQ
Trigger: CTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCAATTCTCACCCCACCTaGCCTGAAGCCCACCATCCC +
Preference number: 2 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGNSHPT*PEAHHP
Trigger: GGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATT...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGASDES*QPQVLG
Trigger: TCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGC...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAGGGCCCCATCATGGTaGGGACAAGCCACTAGGCTG +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPRAPSW*GQATRL
Trigger: CAGCCTAGTGGCTTGTCCTCACCATGATGGGGCCCT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCGAGCAGACTGTCCACTaGTCATCTTCTTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGEQTVH*SSSSTR
Trigger: CCTGGTTGAAGAAGATGATCAGTGGACAGTCTGCTC...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGGTGAGAGGATTGCTTaGGCCCAGAGTTCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFGERIA*AQSSRL
Trigger: CAGCCTTGAACTCTGGGCTCAAGCAATCCTCTCACC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPPPQPA*EGLKAR
Trigger: CCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGTCGTGGACTCAGGCTaGGAAACCCCACTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTVVDSG*ETPLQD
Trigger: ATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGAC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGTCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGSPHLP*SPPSQQ
Trigger: CTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGA...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGGCGACTGGGTTTCCTaGCCCTCCGGCCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCGDWVS*PSGPAH
Trigger: ATGAGCTGGGCCGGAGGGTCAGGAAACCCAGTCGCC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGGATCCTGGTCCTATTaGGCGCTAAAGATTCCACCA +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPGSWSY*ALKIPP
Trigger: TGGTGGAATCTTTAGCGCTCAATAGGACCAGGATCC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTATGCACAGATGGGGCTaGGCATCTACTCAGCACCAG +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTMHRWG*ASTQHQ
Trigger: CTGGTGCTGAGTAGATGCGCAGCCCCATCTGTGCAT...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCGAAGGCAAGTCTCATTaGGGAGAAAGCAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGEGKSH*GESRTL
Trigger: CAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTC...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTTTGCTCCATTTTTCTaGTCTCCTACTGGTACAGGA +
Preference number: 2 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGFAPFF*SPTGTG
Trigger: TCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGAAGGATTTGGGACTaGGGGAAGAGGGAAGACCGT +
Preference number: 2 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGRIWD*GKREDR
Trigger: ACGGTCTTCCCTCTTCCCTCAGTCCCAAATCCTTCC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTA +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFEKAEL*SPGQEV
Trigger: TACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPQKLHN*GVFKVL
Trigger: CAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTG...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGACAAGCCACTAGGCTaGAGCCCAAACTATAAGGGG +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTDKPLG*SPNYKG
Trigger: CCCCTTATAGTTTGGGCTTCAGCCTAGTGGCTTGTC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGCAAAGGCAGGAGAATTaGCTGAAGCCAGGACTTCAA +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPQRQEN*LKPGLQ
Trigger: TTGAAGTCCTGGCTTCAGGCAATTCTCCTGCCTTTG...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATAATTCTCACCCCACCTaGCCTGAAGCCCACCATCCC +
Preference number: 2 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHNSHPT*PEAHHP
Trigger: GGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATT...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCATTGTCCCTTTCTCTaGCTTCACACAAAGCCCGAC +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTHCPFL*LHTKPD
Trigger: GTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGCATACAGGACTTCTGTaGAATTTGTCCCATGGGCTT +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPHTGLL*NLSHGL
Trigger: AAGCCCATGGGACAAATTGCACAGAAGTCCTGTATG...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCAAAGACCTAAAGACTTaGCCTTTCCTACCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFKDLKT*PFLPGL
Trigger: CAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARAPPQPA*EGLKAR
Trigger: CCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTATGGGGCTCACGAAATaGGCAGCTATTGGGTACCTA +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTMGLTK*AAIGYL
Trigger: TAGGTACCCAATAGCTGCCCATTTCGTGAGCCCCAT...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCAGCATCTGGCAAGCTaGATGGATCAACATAGGCCT +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTQHLAS*MDQHRP
Trigger: AGGCCTATGTTGATCCATCCAGCTTGCCAGATGCTG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGTGATGTCGAGGAGTTaGAGCCCACATGCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPVMSRS*SPHAQN
Trigger: ATTTTGGGCATGTGGGCTTCAACTCCTCGACATCAC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCAATGGAGAGCCTGAGTaGTACAAAGGTGAACAATGT +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFNGEPE*YKGEQC
Trigger: ACATTGTTCACCTTTGTAGCACTCAGGCTCTCCATT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCCCCTTTGTACAGATaGTATTCTTGGAATGTTGCC +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSPLYR*YSWNVA
Trigger: GGCAACATTCCAAGAATAGCATCTGTACAAAGGGGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCGGCTGACTACAGATaGTGTGCCCTTTGTTTTATT +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSADYR*CALCFI
Trigger: AATAAAACAAAGGGCACAGCATCTGTAGTCAGCCGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCGCCCATCAGCACACTaGCATTCACTCGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCRPSAH*HSLASM
Trigger: CATGCTGGCGAGTGAATGCCAGTGTGCTGATGGGCG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCTACTGCCTAGGTCGTaGACTCAGGCTGCGAAACCC +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGLLPRS*TQAAKP
Trigger: GGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGRQHEQ*CRGVEA
Trigger: GGCTTCAACTCCTCGACATCACTGTTCATGCTGGCG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGAGGCTATCTCTCCTCTaGCCTCGAAGGCAGAGCCTA +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGRLSLL*PRRQSL
Trigger: TAGGCTCTGCCTTCGAGGTCAGAGGAGAGATAGCCT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGGCTGCAGACAGCAATaGTGGCACCACTGTACTCCA +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCGCRQQ*WHHCTP
Trigger: TGGAGTACAGTGGTGCCATCATTGCTGTCTGCAGCC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCTCAAGTCCACCGCCTTaGTTCAGAGCCGCCCAATTC +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCSSPPP*FRAAQF
Trigger: GAATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGA...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCTAAGAACGCCCTCCTaGCTGATCCTGGTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLLRTPS*LILVAQ
Trigger: CTGGGCCACCAGGATCAGCCAGGAGGGCGTTCTTAG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCGCCCATCAGCACACTaGCATTCACTCGCCAGCATG +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARARPSAH*HSLASM
Trigger: CATGCTGGCGAGTGAATGCCAGTGTGCTGATGGGCG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTCAATGAAGGGGCAGTaGTTCATTCTACAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPSMKGQ*FILQKD
Trigger: ATCCTTTTGTAGAATGAACCACTGCCCCTTCATTGA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCTATCTTTAGACAGATaGGGCTCCTCACAGGATCTT +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTLSLDR*GSSQDL
Trigger: AAGATCCTGTGAGGAGCCCCATCTGTCTAAAGATAG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGTGATTCCCTTCAGTaGTTATGGTCATCTTTGTTC +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFCDSLQ*LWSSLF
Trigger: GAACAAAGATGACCATAACCACTGAAGGGAATCACA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCCAGGCCAAAAGCAGTaGCAACTCCAGCCTCTTACT +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCPGQKQ*QLQPLT
Trigger: AGTAAGAGGCTGGAGTTGTCACTGCTTTTGGCCTGG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCCAGGCCAAAAGCAGTaGCAACTCCAGCCTCTTACT +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGPGQKQ*QLQPLT
Trigger: AGTAAGAGGCTGGAGTTGTCACTGCTTTTGGCCTGG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGCTGGATGCCTCAGATaGGAGCTGACAACCCCAGGT +
Preference number: 2 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIAGCLR*ELTTPG
Trigger: ACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCTCTTCAACCAGGCCCTaGAGAAGGCACCTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: GVEAHMPKISLAPYHSTISSTRP*RRHLEA
Trigger: AGCCTCGAGGTGCCTTCTTCAGGGCCTGGTTGAAGA...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCC +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARARQHEQ*CRGVEA
Trigger: GGCTTCAACTCCTCGACATCACTGTTCATGCTGGCG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGGGAGAGGGCTAGGGTaGCTTAAGGGTACAATGACA +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCGRGLG*LKGTMT
Trigger: TGTCATTGTACCCTTAAGTCACCCTAGCCCTCTCCC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGCTATTCTTGGAATGTTaGCAGTTTTTCATGGGTAAC +
Preference number: 2 (lower is better)
Translates to: GSRTIEITSTARPTPKRPLFLEC*QFFMGN
Trigger: GTTACCCATGAAAAACTGGCAACATTCCAAGAATAG...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCTATTCTTGGAATGTTaGCAGTTTTTCATGGGTAAC +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFLFLEC*QFFMGN
Trigger: GTTACCCATGAAAAACTGGCAACATTCCAAGAATAG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGGATCTTCCAAACGTTaGAAAGGAACCAACCCTAAT +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTGSSKR*KGTNPN
Trigger: ATTAGGGTTGGTTCCTTTCCAACGTTTGGAAGATCC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCAAATTACCCAAATGCTaGGCAGTCAGGCACACCGGC +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCKLPKC*AVRHTG
Trigger: GCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 90 bp GCACACTGGCATTCACTCGCCAGCATGAACAGTGATGTCGAGGAGTaGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTA +
Preference number: 2 (lower is better)
Translates to: AHWHSLASMNSDVEE*KPTCPKYLLLHITL
Trigger: TAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTTCATGCTGGCGAGTGAATGCCAGTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCATTCACTCGCCAGCATaGACAGTGATGTCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCIHSPA*TVMSRS
Trigger: ACTCCTCGACATCACTGTTCATGCTGGCGAGTGAAT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTAGGGCCCCATCATGGTaGGGACAAGCCACTAGGCTG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATRAPSW*GQATRL
Trigger: CAGCCTAGTGGCTTGTCCTCACCATGATGGGGCCCT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGGGCTTTCTCAGGGCTaGAGACATTGTCTCCACAGC +
Preference number: 2 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIGLSQG*RHCLHS
Trigger: GCTGTGGAGACAATGTCTGCAGCCCTGAGAAAGCCC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCTAAGAACGCCCTCCTaGCTGATCCTGGTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATLRTPS*LILVAQ
Trigger: CTGGGCCACCAGGATCAGCCAGGAGGGCGTTCTTAG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTTTTCTGATCTCCTACTaGTACAGGAAACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTFLISY*YRKQKS
Trigger: GCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAA...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGAAATGGGCAGCTATTaGGTACCTATAAATATGGAC +
Preference number: 2 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTEMGSY*VPINMD
Trigger: GTCCATATTTATAGGTACCCAATAGCTGCCCATTTC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTACAGATGCTATTCTTaGAATGTTGCCAGTTTTTCA +
Preference number: 2 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFYRCYS*NVASFS
Trigger: TGAAAAACTGGCAACATTCCAAGAATAGCATCTGTA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTCTTCAACCAGGCCCTaGAGAAGGCACCTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATSSTRP*RRHLEA
Trigger: AGCCTCGAGGTGCCTTCTTCAGGGCCTGGTTGAAGA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCATTCACTCGCCAGCATaGACAGTGATGTCGAGGAGT +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARAIHSPA*TVMSRS
Trigger: ACTCCTCGACATCACTGTTCATGCTGGCGAGTGAAT...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCQKLHN*GVFKVL
Trigger: CAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATASDES*QPQVLG
Trigger: TCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTCAAGTCCACCGCCTTaGTTCAGAGCCGCCCAATTC +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATSSPPP*FRAAQF
Trigger: GAATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCATACAGGACTTCTGTaGAATTTGTCCCATGGGCTT +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGHTGLL*NLSHGL
Trigger: AAGCCCATGGGACAAATTGCACAGAAGTCCTGTATG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCAAGGCAGAGACTGCTaGATGCCTCAGATGAGAGCT +
Preference number: 2 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVQGRDC*MPQMRA
Trigger: AGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATCTGGCAAGCTGGATaGATCAACATAGGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIIWQAG*INIGLG
Trigger: ACCCAGGCCTATGTTGATCCATCCAGCTTGCCAGAT...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGCACCTCGAGGCTTGTaGCTCTGCAGCATCTGGCAA +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPAPRGL*LCSIWQ
Trigger: TTGCCAGATGCTGCAGAGTCACAAGCCTCGAGGTGC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGACAAGCCACTAGGCTaGAGCCCAAACTATAAGGGG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATDKPLG*SPNYKG
Trigger: CCCCTTATAGTTTGGGCTTCAGCCTAGTGGCTTGTC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGTCGGCTGACTACAGATaGTGTGCCCTTTGTTTTATT +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGSADYR*CALCFI
Trigger: AATAAAACAAAGGGCACAGCATCTGTAGTCAGCCGA...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGAAGGCAAGTCTCATTaGGGAGAAAGCAGAACTTTG +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARAEGKSH*GESRTL
Trigger: CAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTAGGAGAATGCACAGATaGGGCTGCGCATCTACTCAG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATRRMHR*GCASTQ
Trigger: CTGAGTAGATGCGCAGCCCCATCTGTGCATTCTCCT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGTCTTAGCCAGGGCCTaGTCTCTGATTGGATTTCCC +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATVLARA*SLIGFP
Trigger: GGGAAATCCAATCAGAGACCAGGCCCTGGCTAAGAC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCCCAAGCTCGAGAATTaGACCTTACTTAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGPKLEN*TLLKRK
Trigger: CTTCCTTTTAAGTAAGGTCCAATTCTCGAGCTTGGG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCCCAAGCTCGAGAATTaGACCTTACTTAAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCPKLEN*TLLKRK
Trigger: CTTCCTTTTAAGTAAGGTCCAATTCTCGAGCTTGGG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 90 bp AACAGTGATGTCGAGGAGTTGAAGCCCACATGCCCAAAATATCTCTaGCTCCATATCACTCTACTATCATTGTCCCTTTCTCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: NSDVEELKPTCPKYL*LHITLLSLSLSLPS
Trigger: TGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTTTGCTCCATTTTTCTaGTCTCCTACTGGTACAGGA +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARAFAPFF*SPTGTG
Trigger: TCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGAGCAGACTGTCCACTaGTCATCTTCTTCAACCAGG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATEQTVH*SSSSTR
Trigger: CCTGGTTGAAGAAGATGATCAGTGGACAGTCTGCTC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGTGATGTCGAGGAGTTaGAGCCCACATGCCCAAAAT +
Preference number: 2 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPVMSRS*SPHAQN
Trigger: ATTTTGGGCATGTGGGCTTCAACTCCTCGACATCAC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCATTGTCCCTTTCTCTaGCTTCACACAAAGCCCGAC +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATHCPFL*LHTKPD
Trigger: GTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGATAGGACAGGTTTTGTaGTCAATTCGGAACATAGAC +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGIGQVL*SIRNID
Trigger: GTCTATGTTCCGAATTGAGCACAAAACCTGTCCTAT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCTCCAGCCTCTTACTTaGGAAGGATTTGGGACTGAG +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATLQPLT*EGFGTE
Trigger: CTCAGTCCCAAATCCTTCCCAAGTAAGAGGCTGGAG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTA +
Preference number: 2 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPEKAEL*SPGQEV
Trigger: TACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTTTCTGATCTCCTACTaGTACAGGAAACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: VFKVLLSECAYVWVLARAFLISY*YRKQKS
Trigger: GCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCAAGGCAGAGACTGCTaGATGCCTCAGATGAGAGCT +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPQGRDC*MPQMRA
Trigger: AGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCTACCAGGCTTGTTTTaGGTAGTTGCATTACATTTT +
Preference number: 2 (lower is better)
Translates to: QRPTQFITYSTTLTESAGLPGLF*VVALHF
Trigger: AAAATGTAATGCAACTACCCAAAACAAGCCTGGTAG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 90 bp TTCTTACAAAGACCTAAAGACTTGCCCTTTCCTACCAGGCTTGTTTaGGGTAGTTGCATTACATTTTACACAGTCTGCCAGTGTTCCCAT +
Preference number: 2 (lower is better)
Translates to: FLQRPKDLPFPTRLV*GSCITFYTVCQCSH
Trigger: ATGGGAACACTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTGTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGAGTTGAAGCCCACATaGCCAAAATATCTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATELKPT*PKYLLL
Trigger: GAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGACACAGGAAATCAATaGAGGGGCAGTGGTTCATTC +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPDTGNQ*RGSGSF
Trigger: GAATGAACCACTGCCCCTTCATTGATTTCCTGTGTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGAAGAGGGAAGACCGTaGCGTCTTCACAAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPEEGRP*RLHKKY
Trigger: GTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 90 bp AAGTCAAGCAAAAATTCCAAATGCAAAGCATTCATAGGACAGGTTTaGTGCTCAATTCGGAACATAGACCAGACCATCAGCAAACAGACA +
Preference number: 2 (lower is better)
Translates to: KSSKNSKCKAFIGQV*CSIRNIDQTISKQT
Trigger: TGTCTGTTTGCTGATGGTCTGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTGGAATTTTTGCTTGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 90 bp TTTAGTTCTTACAAAGACCTAAAGACTTGCCCTTTCCTACCAGGCTaGTTTTGGGTAGTTGCATTACATTTTACACAGTCTGCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: FSSYKDLKTCPFLPG*FWVVALHFTQSASV
Trigger: AACACTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTGTAAGAACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTCCCACCATCTGGATTaGCACAGGAAATCAATGAAG +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPSHHLD*HRKSMK
Trigger: CTTCATTGATTTCCTGTGTCAATCCAGATGGTGGGA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTAAGTACCTACCACTTTaGTCCATTTTTCTGATCTCC +
Preference number: 2 (lower is better)
Translates to: KICDPSHKTHPPIHTVATKYLPL*SIFLIS
Trigger: GGAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTCAATGAAGGGGCAGTaGTTCATTCTACAAAAGGAT +
Preference number: 2 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPSMKGQ*FILQKD
Trigger: ATCCTTTTGTAGAATGAACCACTGCCCCTTCATTGA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp TGCTTCAGAGCCGCCCAATTCTCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAGCCTAAGAACGCCCTC +
Preference number: 3 (lower is better)
Translates to: CFRAAQFSPHLP*SPPSQQPKNAL
Trigger: GAGGGCGTTCTTAGGCTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATTGGGCGGCTCTGAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp GGACAGAAGTGGCCACACAGGCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGGCAGAGACTGCTGGAT +
Preference number: 3 (lower is better)
Translates to: GQKWPHRPPQPA*EGLKARQRLLD
Trigger: ATCCAGCAGTCTCTGCCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGCCTGTGTGGCCACTTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp TGGGCAGTCAGGCACACCGGCCTACTGCCTAGGTCGTaGACTCAGGCTGCGAAACCCCACTGCAGGATTGAG +
Preference number: 3 (lower is better)
Translates to: WAVRHTGLLPRS*TQAAKPHCRIE
Trigger: CTCAATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp TACCCAAATGCTGGGCAGTCAGGCACACCGGCCTACTaGCTAGGTCGTGGACTCAGGCTGCGAAACCCCACT +
Preference number: 3 (lower is better)
Translates to: YPNAGQSGTPAY*LGRGLRLRNPT
Trigger: AGTGGGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp ATCCCCAGGGCAAGAAGTAAGGGCGACTGGGTTTCCTaGCCCTCCGGCCCAGCTCATCTAGAGCAGACTGTC +
Preference number: 3 (lower is better)
Translates to: IPRARSKGDWVS*PSGPAHLEQTV
Trigger: GACAGTCTGCTCTAGATGAGCTGGGCCGGAGGGTCAGGAAACCCAGTCGCCCTTACTTCTTGCCCTGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCAGGGCTGCAGACATaGTCTCCACAGCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSGLQT*SPQPQA
Trigger: AGCCTGTGGCTGTGGAGACAATGTCTGCAGCCCTGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp GTTGACGGAAAGTGCTGGGCCCGCCCACAGAAACAATaGACTATGTACACGGGCAGGGGGCAAGTCTTCAGC +
Preference number: 3 (lower is better)
Translates to: VDGKCWARPQKQ*TMYTGRGQVFS
Trigger: GCTGAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTTCAGGGCTGCAGACATaGTCTCCACAGCCACAGGCT +
Preference number: 3 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTSGLQT*SPQPQA
Trigger: AGCCTGTGGCTGTGGAGACAATGTCTGCAGCCCTGA...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCTCCCAGACGCACCCTaGATGACCAAAAGCTGCACA +
Preference number: 3 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTLPDAP*MTKSCT
Trigger: TGTGCAGCTTTTGGTCATCAAGGGTGCGTCTGGGAG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp GCAAGGCAGAGACTGCTGGATGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGAAAGACAGGGATCCCA +
Preference number: 3 (lower is better)
Translates to: ARQRLLDASDES*QPQVLGKTGIP
Trigger: TGGGATCCCTGTCTTTCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp TTCAACCAGGCCCTGAAGAAGGCACCTCGAGGCTTGTaGCTCTGCAGCATCTGGCAAGCTGGATGGATCAAC +
Preference number: 3 (lower is better)
Translates to: FNQALKKAPRGL*LCSIWQAGWIN
Trigger: GTTGATCCATCCAGCTTGCCAGATGCTGCAGAGTCACAAGCCTCGAGGTGCCTTCTTCAGGGCCTGGTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTTTCAAGTCCACCGCCTaGCTTCAGAGCCGCCCAATT +
Preference number: 3 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPFKSTA*LQSRPI
Trigger: AATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGAA...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGCAAAGGCAGGAGAATaGCCTGAAGCCAGGACTTCA +
Preference number: 3 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTAKAGE*PEARTS
Trigger: TGAAGTCCTGGCTTCAGGCAATTCTCCTGCCTTTGC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCAAAGACCTAAAGACTaGCCCTTTCCTACCAGGCTT +
Preference number: 3 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFQRPKD*PFPTRL
Trigger: AAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp CATCTGGCAAGCTGGATGGATCAACATAGGCCTGGGTaGAGATGGGGCTCACGAAATGGGCAGCTATTGGGT +
Preference number: 3 (lower is better)
Translates to: HLASWMDQHRPG*RWGSRNGQLLG
Trigger: ACCCAATAGCTGCCCATTTCGTGAGCCCCATCTTCACCCAGGCCTATGTTGATCCATCCAGCTTGCCAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp GGCCAAAGCGGTTTACAATCTAAATTACCCAAATGCTaGGCAGTCAGGCACACCGGCCTACTGCCTAGGTCG +
Preference number: 3 (lower is better)
Translates to: GQSGLQSKLPKC*AVRHTGLLPRS
Trigger: CGACCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGATTGTAAACCGCTTTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp TCAGGCCAAAGCGGTTTACAATCTAAATTACCCAAATaGTGGGCAGTCAGGCACACCGGCCTACTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: SGQSGLQSKLPK*WAVRHTGLLPR
Trigger: CCTAGGCAGTAGGCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGATTGTAAACCGCTTTGGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCATCACTCTACTATCATaGTCCCTTTCTCTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFITLLS*SLSLPS
Trigger: TGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGAT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGCCACCCCAGCCAGCTaGGGAGGGGCTAAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: KICDPSHKTHPPIHTVATATPAS*GGAKGK
Trigger: CTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGCCACCCCAGCCAGCTaGGGAGGGGCTAAAGGCAAG +
Preference number: 3 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPATPAS*GGAKGK
Trigger: CTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTGCCCAAAATATCTCTaGCTCCATATCACTCTACTA +
Preference number: 3 (lower is better)
Translates to: GSRTIEITSTARPTPKRPCPKYL*LHITLL
Trigger: TAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTATGTTCTTTCCCCTTaGTACAGATGCTATTCTTGG +
Preference number: 3 (lower is better)
Translates to: GSRTIEITSTARPTPKRPYVLSP*YRCYSW
Trigger: CCAAGAATAGCATCTGTACAAAGGGGAAAGAACATA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp ACAACTCCAGCCTCTTACTTGGGAAGGATTTGGGACTaGGGGAAGAGGGAAGACCGTGCCGTCTTCACAAAA +
Preference number: 3 (lower is better)
Translates to: TTPASYLGRIWD*GKREDRAVFTK
Trigger: TTTTGTGAAGACGGCACGGTCTTCCCTCTTCCCTCAGTCCCAAATCCTTCCCAAGTAAGAGGCTGGAGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp GAAAGACAGGGATCCCAAACTCCAGGCCAAAAGCAGTaGCAACTCCAGCCTCTTACTTGGGAAGGATTTGGG +
Preference number: 3 (lower is better)
Translates to: ERQGSQTPGQKQ*QLQPLTWEGFG
Trigger: CCCAAATCCTTCCCAAGTAAGAGGCTGGAGTTGTCACTGCTTTTGGCCTGGAGTTTGGGATCCCTGTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp AGGAAGGCAAGTCTCATTGGGGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTAAGGGCGACTGGGTTT +
Preference number: 3 (lower is better)
Translates to: RKASLIGEKAEL*SPGQEVRATGF
Trigger: AAACCCAGTCGCCCTTACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp TTTGCTAAAGAGTCACACACCCACAGTGTTGGCCTCTaGGCTGTACAAAGGTCAAGGTACCTGGAGCGGTTA +
Preference number: 3 (lower is better)
Translates to: FAKESHTHSVGL*AVQRSRYLERL
Trigger: TAACCGCTCCAGGTACCTTGACCTTTGTACAGCCCAGAGGCCAACACTGTGGGTGTGTGACTCTTTAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp ATCAGCACACTGGCATTCACTCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCCCACATGCCCAAAATA +
Preference number: 3 (lower is better)
Translates to: ISTLAFTRQHEQ*CRGVEAHMPKI
Trigger: TATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTTCATGCTGGCGAGTGAATGCCAGTGTGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp CCCAGACGCACCCTTGATGACCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTGCTAAGTGAATGTGCA +
Preference number: 3 (lower is better)
Translates to: PRRTLDDQKLHN*GVFKVLLSECA
Trigger: TGCACATTCACTTAGCAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTGGTCATCAAGGGTGCGTCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp TGCTCCATATCACTCTACTATCATTGTCCCTTTCTCTaGCTTCACACAAAGCCCGACAGGGCTTTCTCAGGG +
Preference number: 3 (lower is better)
Translates to: CSISLYYHCPFL*LHTKPDRAFSG
Trigger: CCCTGAGAAAGCCCTGTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGATATGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp CTGGGTGAAGATGGGGCTCACGAAATGGGCAGCTATTaGGTACCTATAAATATGGACAGAAGTGGCCACACA +
Preference number: 3 (lower is better)
Translates to: LGEDGAHEMGSY*VPINMDRSGHT
Trigger: TGTGTGGCCACTTCTGTCCATATTTATAGGTACCCAATAGCTGCCCATTTCGTGAGCCCCATCTTCACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp ATATGTTTGGGTCTTAGCCAGGGCCTGGTCTCTGATTaGATTTCCCATACCCTAGAAGTGAGGCTGGATCCT +
Preference number: 3 (lower is better)
Translates to: ICLGLSQGLVSD*ISHTLEVRLDP
Trigger: AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTGGCTAAGACCCAAACATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCTTCAAGTCCACCGCCTaGCTTCAGAGCCGCCCAATT +
Preference number: 3 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIFKSTA*LQSRPI
Trigger: AATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGAA...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp ACAGGACTTCTGTGCAATTTGTCCCATGGGCTTAGATaGAGGTCACAGACAGGCCTCACCTTAAGAAAACCA +
Preference number: 3 (lower is better)
Translates to: TGLLCNLSHGLR*RSQTGLTLRKP
Trigger: TGGTTTTCTTAAGGTGAGGCCTGTCTGTGACCTGCATCTAAGCCCATGGGACAAATTGCACAGAAGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp GCAATTCATCACATACAGTACAACGTTGACGGAAAGTaGTGGGCCCGCCCACAGAAACAATGCACTATGTAC +
Preference number: 3 (lower is better)
Translates to: AIHHIQYNVDGK*WARPQKQCTMY
Trigger: GTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CCA 72 bp ATTCATCACATACAGTACAACGTTGACGGAAAGTGCTaGGCCCGCCCACAGAAACAATGCACTATGTACACG +
Preference number: 3 (lower is better)
Translates to: IHHIQYNVDGKC*ARPQKQCTMYT
Trigger: CGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp CCATACCCTAGAAGTGAGGCTGGATCCTGGTCCTATTaGGCGCTAAAGATTCCACCAATAACTGAAGTCAAG +
Preference number: 3 (lower is better)
Translates to: PYPRSEAGSWSY*ALKIPPITEVK
Trigger: CTTGACTTCAGTTATTGGTGGAATCTTTAGCGCTCAATAGGACCAGGATCCAGCCTCACTTCTAGGGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCGAAATGGGCAGCTATaGGGTACCTATAAATATGGA +
Preference number: 3 (lower is better)
Translates to: QRPTQFITYSTTLTESAGRNGQL*GTYKYG
Trigger: TCCATATTTATAGGTACCCAATAGCTGCCCATTTCG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp AATGGAGAGCCTGAGTGCTACAAAGGTGAACAATGTTaGCCCAAGCTCGAGAATTGGACCTTACTTAAAAGG +
Preference number: 3 (lower is better)
Translates to: NGEPECYKGEQC*PKLENWTLLKR
Trigger: CCTTTTAAGTAAGGTCCAATTCTCGAGCTTGGGGCAACATTGTTCACCTTTGTAGCACTCAGGCTCTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp GACTTGCCCTTTCCTACCAGGCTTGTTTTGGGTAGTTaGATTACATTTTACACAGTCTGCCAGTGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: DLPFPTRLVLGS*ITFYTVCQCSH
Trigger: ATGGGAACACTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp GGTACCTGGAGCGGTTACTCCTCTTCTGCAGAAAAATaGAGAGACCAACGCAATTCATCACATACAGTACAA +
Preference number: 3 (lower is better)
Translates to: GTWSGYSSSAEK*RDQRNSSHTVQ
Trigger: TTGTACTGTATGTGATGAATTGCGTTGGTCTCTGCATTTTTCTGCAGAAGAGGAGTAACCGCTCCAGGTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGGAGAAAGCAGAACTTaGATCCCCAGGGCAAGAAGT +
Preference number: 3 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPGESRT*IPRARS
Trigger: ACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTCC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGTGCCCAAAATATCTCTaGCTCCATATCACTCTACTA +
Preference number: 3 (lower is better)
Translates to: QRPTQFITYSTTLTESAGCPKYL*LHITLL
Trigger: TAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCA...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp AGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTaGTCCATTTTTCTGATCTCCTACTGGTACAGGAAA +
Preference number: 3 (lower is better)
Translates to: RPCRLHKKYLPL*SIFLISYWYRK
Trigger: TTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp AGCATGAACAGTGATGTCGAGGAGTTGAAGCCCACATaGCCAAAATATCTCTTGCTCCATATCACTCTACTA +
Preference number: 3 (lower is better)
Translates to: SMNSDVEELKPT*PKYLLLHITLL
Trigger: TAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCCTCGACATCACTGTTCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTTCATAGGACAGGTTTaGTGCTCAATTCGGAACATA +
Preference number: 3 (lower is better)
Translates to: VFKVLLSECAYVWVLARAFIGQV*CSIRNI
Trigger: TATGTTCCGAATTGAGCACAAAACCTGTCCTATGAA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGAAAGGTTGTACCATCTaGTCATCTGCCATAACAAAT +
Preference number: 3 (lower is better)
Translates to: QRPTQFITYSTTLTESAGKGCTI*SSAITN
Trigger: ATTTGTTATGGCAGATGACAAGATGGTACAACCTTT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTGGATCCTGGTCCTATaGAGCGCTAAAGATTCCACC +
Preference number: 3 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPWILVL*SAKDST
Trigger: GGTGGAATCTTTAGCGCTCAATAGGACCAGGATCCA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR GCA 72 bp TCTTTCCCCTTTGTACAGATGCTATTCTTGGAATGTTaGCAGTTTTTCATGGGTAACAAGGAAGGAGAGGAA +
Preference number: 3 (lower is better)
Translates to: SFPFVQMLFLEC*QFFMGNKEGEE
Trigger: TTCCTCTCCTTCCTTGTTACCCATGAAAAACTGGCAACATTCCAAGAATAGCATCTGTACAAAGGGGAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR-3UTR CAA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTATCCCACCATCTGGATaGACACAGGAAATCAATGAA +
Preference number: 3 (lower is better)
Translates to: KICDPSHKTHPPIHTVATIPPSG*TQEINE
Trigger: TTCATTGATTTCCTGTGTCAATCCAGATGGTGGGAT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR TCA 72 bp AAAAGTTCTTTACGTTCTCAAAACTGTCTACTTTCATaGTCCCATTCAGTCCACACCATAGCCCTAGGAGAT +
Preference number: 3 (lower is better)
Translates to: KSSLRSQNCLLS*SHSVHTIALGD
Trigger: ATCTCCTAGGGCTATGGTGTGGACTGAATGGGATCATGAAAGTAGACAGTTTTGAGAACGTAAAGAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTTGCAGGAGGTCATCTaGGGGCGCGCCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGLQEVI*GRAAPS
Trigger: GGAGGGGGCGGCGCGCCCCCAGATGACCTCCTGCAA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTGCGGGCCGTGTGCTTaGGCGCGGGCTCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGCGPCA*ARAPPC
Trigger: ACACGGAGGAGCCCGCGCCCAAGCACACGGCCCGCA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAGGCTGCGGGCCGTGTaGTTGGGCGCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPRLRAV*LGAGSS
Trigger: GGAGGAGCCCGCGCCCAAGCACACGGCCCGCAGCCT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCCGCGGCTCGTCTCCTTaGCGACGCCGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGRGSSP*RRRSAG
Trigger: TCCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCG...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGCCCAGTTCGATGACTaGGGGCTCCGCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPAQFDD*GLRCGR
Trigger: GCGGCCGCAGCGGAGCCCCCAGTCATCGAACTGGGC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGCGGGCCGTGTGCTTaGGCGCGGGCTCCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFCGPCA*ARAPPC
Trigger: ACACGGAGGAGCCCGCGCCCAAGCACACGGCCCGCA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGGCAGGATGGAGGCTaGGGGCCGTGTGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFWQDGG*GPCAWA
Trigger: CGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCCCGTCCCTCTAGCTaGGGGTCACTGCGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSRPSS*GSLRAA
Trigger: GGCGGCTCGCAGTGACCCCCAGCTAGAGGGACGGGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGTCTGCACAGCTCGGTaGTGGGCACCCGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFVCTAR*WAPDGA
Trigger: CGCGCCATCGGGTGCCCACCACCGAGCTGTGCAGAC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGGCGACTGGGTTTCCTaGCCCTCCGGCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFGDWVS*PSGPAH
Trigger: ATGAGCTGGGCCGGAGGGTCAGGAAACCCAGTCGCC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCAGGGCCCCATCATGGTaGGGACAAGCCACTAGGCTG +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGRAPSW*GQATRL
Trigger: CAGCCTAGTGGCTTGTCCTCACCATGATGGGGCCCT...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCAGCCAGGTCTCCGGCTaGCGCTACACCGCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSQVSG*RYTAKG
Trigger: TCCCTTCGCGGTGTAGCGGCAGCCGGAGACCTGGCT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR GCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTGGTCCTGGGCGATCTaGCGCGCCCAAAGCGAGTTT +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGWSWAI*RAQSEF
Trigger: AAACTCGCTTTGGGCGCGGCAGATCGCCCAGGACCA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR GCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTTTCCGCCCCCAACCTaGAGGTGTTTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGFPPPT*RCLEPF
Trigger: GAAAGGCTCCAAACACCTGCAGGTTGGGGGCGGAAA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGCAGCATGGCAGGATaGAGGCTGCGGGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGSMAG*RLRAVC
Trigger: GCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGCGCGCCCAGTTCGATaGCTGGGGGCTCCGCTGCGG +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCARPVR*LGAPLR
Trigger: CCGCAGCGGAGCCCCCAGTCATCGAACTGGGCGCGC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGCACCTCGAGGCTTGTaGCTCTGCAGCATCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFAPRGL*LCSIWQ
Trigger: TTGCCAGATGCTGCAGAGTCACAAGCCTCGAGGTGC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTGLQLR*GVVLGD
Trigger: ATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGTGTGGGGATCAGCTTaGGGAGCTCGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTVWGSA*GARQRP
Trigger: GGGCCTTTGCCGAGCTCCGCAAGCTGATCCCCACAC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTCCCGACAGGCTGTCTaGAACATTTTCGAACCCTCC +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGSRQAV*NIFEPS
Trigger: GGAGGGTTCGAAAATGTTCCAGACAGCCTGTCGGGA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCCAAGGCAGAGACTGCTaGATGCCTCAGATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGQGRDC*MPQMRA
Trigger: AGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTG...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCTACTGCCTAGGTCGTaGACTCAGGCTGCGAAACCC +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFLLPRS*TQAAKP
Trigger: GGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCAAATTACCCAAATGCTaGGCAGTCAGGCACACCGGC +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGKLPKC*AVRHTG
Trigger: GCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTT...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGCTGCGGTGTGGTCCTaGGCGATAGAATCAGATCCC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPAAVWS*AIESDP
Trigger: GGGATCTGATTCTATCGCCCAGGACCACACCGCAGC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371884.6
CDS-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFASDES*QPQVLG
Trigger: TCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCGGATCCTGGTCCTATTaGGCGCTAAAGATTCCACCA +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGGSWSY*ALKIPP
Trigger: TGGTGGAATCTTTAGCGCTCAATAGGACCAGGATCC...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCGAAATAGTTGTCGGCTaGCTACAGATGCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGEIVVG*LQMLCP
Trigger: AGGGCACAGCATCTGTAGTCAGCCGACAACTATTTC...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTAGGTGTCTACGCGGTTaGCTCCTCAGCCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTRCLRG*LLSQVS
Trigger: GGAGACCTGGCTGAGGAGGCAACCGCGTAGACACCT...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATCCCCATCCAGGGAGCTaGCGCAGCTGGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHPHPGS*RSWSWG
Trigger: CCCCCAACTCCAGCTGCGGCAGCTCCCTGGATGGGG...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTGGCAGGATGGAGGCTaGGGGCCGTGTGCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHWQDGG*GPCAWA
Trigger: CGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCAACGTTGACGGAAAGTaGTGGGCCCGCCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFNVDGK*WARPQK
Trigger: TTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCTTGCAGGAGGTCATCTaGGGGCGCGCCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCLQEVI*GRAAPS
Trigger: GGAGGGGGCGGCGCGCCCCCAGATGACCTCCTGCAA...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTAGAGACCGGCCCCTCTaGATAGGATCTCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPRDRPL*IGSPLR
Trigger: GCGGAGTGGAGATCCTATTCAGAGGGGCCGGTCTCT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCTGTCTGTACATGGCTaGATTAGGGCCCCATCATGG +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFLSVHG*IRAPSW
Trigger: CCATGATGGGGCCCTAATTCAGCCATGTACAGACAG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGGGAAAGCACGTCTTaGAGGAGGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGESTS*RRSSGG
Trigger: GCCCCCAGATGACCTCCTGCAAGACGTGCTTTCCCC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCAAGGCAGAGACTGCTaGATGCCTCAGATGAGAGCT +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFQGRDC*MPQMRA
Trigger: AGCTCTCATCTGAGGCATCCAGCAGTCTCTGCCTTG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAGGAGAATGCACAGATaGGGCTGCGCATCTACTCAG +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPRRMHR*GCASTQ
Trigger: CTGAGTAGATGCGCAGCCCCATCTGTGCATTCTCCT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATTACCCAAATGCTaGGCAGTCAGGCACACCGGC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPKLPKC*AVRHTG
Trigger: GCCGGTGTGCCTGACTGCCCAGCATTTGGGTAATTT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGAGGCCAGCGGCTGGCTaGGGCTGTAGAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQRPAAG*GCRAAR
Trigger: GCGCGCTGCTCTACAGCCTCAGCCAGCCGCTGGCCT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCTCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCSPHLP*SPPSQQ
Trigger: CTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGA...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGCTGGATGCCTCAGATaGGAGCTGACAACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPAGCLR*ELTTPG
Trigger: ACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGAGCAGACTGTCCACTaGTCATCTTCTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFEQTVH*SSSSTR
Trigger: CCTGGTTGAAGAAGATGATCAGTGGACAGTCTGCTC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTRQHEQ*CRGVEA
Trigger: GGCTTCAACTCCTCGACATCACTGTTCATGCTGGCG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCTAGCTGGGGGTCACTaGGAGCCGCCTCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTILAGGH*EPPRSA
Trigger: CGCCGAGCGAGGCGGCTCGCAGTGACCCCCAGCTAG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCGGGCCCGGGAGGTCTaGACAGCTCGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLRAREV*TARWWA
Trigger: TGCCCACCACCGAGCTGTGCAGACCTCCCGGGCCCG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCGGGCCCGGGAGGTCTaGACAGCTCGGTGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIRAREV*TARWWA
Trigger: TGCCCACCACCGAGCTGTGCAGACCTCCCGGGCCCG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGCGGGAGGACTCAGCTaGACCATGCGGCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIAGGLS*TMRPSP
Trigger: CGGCGACGGCCGCATGGTGCAGCTGAGTCCTCCCGC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCCACCACAGGGTCCTTaGCAGTCTTGGCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGPPQGP*QSWPAG
Trigger: CCCAGCGGGCCAAGACTGGCAAGGACCCTGTGGTGG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCCCCATCCAGGGAGCTaGCGCAGCTGGAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAPHPGS*RSWSWG
Trigger: CCCCCAACTCCAGCTGCGGCAGCTCCCTGGATGGGG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCAGGCTGCGGGCCGTGTaGTTGGGCGCGGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVRLRAV*LGAGSS
Trigger: GGAGGAGCCCGCGCCCAAGCACACGGCCCGCAGCCT...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGGGCTTTCTCAGGGCTaGAGACATTGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTGLSQG*RHCLHS
Trigger: GCTGTGGAGACAATGTCTGCAGCCCTGAGAAAGCCC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGGCACACCGGCCTACTaGCTAGGTCGTGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHGTPAY*LGRGLR
Trigger: CCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTATGGGGGTCAATGGCTaGGAATTACCTCCTGTCCCC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTMGVNG*ELPPVP
Trigger: GGGGACAGGAGGTAATTCCCAGCCATTGACCCCCAT...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATAGTTACGCTGCGGTGTaGTCCTGGGCGATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHSYAAV*SWAICR
Trigger: GCGGCAGATCGCCCAGGACCACACCGCAGCGTAACT...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGCCCAGTTCGATGACTaGGGGCTCCGCTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQAQFDD*GLRCGR
Trigger: GCGGCCGCAGCGGAGCCCCCAGTCATCGAACTGGGC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGCGCACAACTTTGGTGTaGGGACCATCAGTAATCTCC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPRTTLV*GPSVIS
Trigger: GGAGATTACTGATGGTCCCCACACCAAAGTTGTGCG...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGGCAGCATGGCAGGATaGAGGCTGCGGGCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAGSMAG*RLRAVC
Trigger: GCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGAATGTGCATATGTTTaGGTCTTAGCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFECAYV*VLARAW
Trigger: CCAGGCCCTGGCTAAGACCCAAACATATGCACATTC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTAGGCTATCTCTCCTCTaGCCTCGAAGGCAGAGCCTA +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPRLSLL*PRRQSL
Trigger: TAGGCTCTGCCTTCGAGGTCAGAGGAGAGATAGCCT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGCTGCAGACAGCAATaGTGGCACCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGCRQQ*WHHCTP
Trigger: TGGAGTACAGTGGTGCCATCATTGCTGTCTGCAGCC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGTGAGAGGATTGCTTaGGCCCAGAGTTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGERIA*AQSSRL
Trigger: CAGCCTTGAACTCTGGGCTCAAGCAATCCTCTCACC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGACTCAGCTGCACCATaGGGCCGTCGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQDSAAP*GRRRAA
Trigger: AGCTGCCCGGCGACGGCCGCATGGTGCAGCTGAGTC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGCCCCGTTCACATTCTaGTGCCGCCATCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAAPFTF*CRHRSR
Trigger: CCGGGAGCGATGGCGGCAGCAGAATGTGAACGGGGC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGAAGAGGGAAGACCGTaGCGTCTTCACAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPEEGRP*RLHKKY
Trigger: GTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTTGATGACCAAAAGCTaGACAACTGAGGGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGLMTKS*TTEGCL
Trigger: TAAACACCCCTCAGTTGTGCAGCTTTTGGTCATCAA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGGCACACCGGCCTACTaGCTAGGTCGTGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCGTPAY*LGRGLR
Trigger: CCTGAGTCCACGACCTAGGCAGTAGGCCGGTGTGCC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCTAAATTACCCAAATaGTGGGCAGTCAGGCACACC +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSKLPK*WAVRHT
Trigger: GGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCGCGGCTCGTCTCCTTaGCGACGCCGTTCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARARGSSP*RRRSAG
Trigger: TCCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGTCTGCACAGCTCGGTaGTGGGCACCCGATGGCGCG +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQVCTAR*WAPDGA
Trigger: CGCGCCATCGGGTGCCCACCACCGAGCTGTGCAGAC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGPPQPA*EGLKAR
Trigger: CCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGGCCTGGTCTCTGATTaGATTTCCCATACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPGLVSD*ISHTLE
Trigger: TTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGGTGGCTCACACCTGTaGTCCTCCCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGGGSHL*SSLLGR
Trigger: CCTCCCGAGTAGGGAGGACCACAGGTGTGAGCCACC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCAAAGGTCAAGGTACCTaGAGCGGTTACTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFKGQGT*SGYSSS
Trigger: AGAAGAGGAGTAACCGCTCCAGGTACCTTGACCTTT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAAGGCCAGCGGCTGGCTaGGGCTGTAGAGCAGCGCGC +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPRPAAG*GCRAAR
Trigger: GCGCGCTGCTCTACAGCCTCAGCCAGCCGCTGGCCT...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTCTTCAACCAGGCCCTaGAGAAGGCACCTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHSSTRP*RRHLEA
Trigger: AGCCTCGAGGTGCCTTCTTCAGGGCCTGGTTGAAGA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGGCGACTGGGTTTCCTaGCCCTCCGGCCCAGCTCAT +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIGDWVS*PSGPAH
Trigger: ATGAGCTGGGCCGGAGGGTCAGGAAACCCAGTCGCC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTCCCACCATCTGGATTaGCACAGGAAATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPSHHLD*HRKSMK
Trigger: CTTCATTGATTTCCTGTGTCAATCCAGATGGTGGGA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGGGAGAGGGCTAGGGTaGCTTAAGGGTACAATGACA +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPGRGLG*LKGTMT
Trigger: TGTCATTGTACCCTTAAGTCACCCTAGCCCTCTCCC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAACTGTCTACTTTCATaGTCCCATTCAGTCCACACC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPNCLLS*SHSVHT
Trigger: GGTGTGGACTGAATGGGATCATGAAAGTAGACAGTT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCATACAGGACTTCTGTaGAATTTGTCCCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFHTGLL*NLSHGL
Trigger: AAGCCCATGGGACAAATTGCACAGAAGTCCTGTATG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCGGTTACTCCTCTTCTaGAGAAAAATGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFRLLLF*RKMQRP
Trigger: TGGTCTCTGCATTTTTCTGCAGAAGAGGAGTAACCG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCTGCACAGCTCGGTGGTaGGCACCCGATGGCGCGCTT +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTICTARW*APDGAL
Trigger: AAGCGCGCCATCGGGTGCCCACCACCGAGCTGTGCA...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCCAGTCTTGGCCCGCTaGGTGCCCTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVPVLAR*VPSSSW
Trigger: CCAGGAGGAGGAGGGCACCCAGCGGGCCAAGACTGG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGGTCCTTGCCAGTCTTaGCCCGCTGGGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLGPCQS*PAGCPP
Trigger: AGGAGGGCACCCAGCGGGCCAAGACTGGCAAGGACC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTGCCGCAGCTGGAGTTaGGGGAAAGCACGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHCRSWS*GKARLA
Trigger: TGCAAGACGTGCTTTCCCCCAACTCCAGCTGCGGCA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTGTAGCTGTCCGGGCTaGCTGCCCCATCCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQCSCPG*LPHPGS
Trigger: GCTCCCTGGATGGGGCAGCCAGCCCGGACAGCTACA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCACGGCGGCAGGCAGCATaGCAGGATGGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPRRQAA*QDGGCG
Trigger: CCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCG...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGGAAGGATAAGGTCATaGGGTACAGAGGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPGRIRS*GTEGEN
Trigger: ATTTTCACCCTCTGTACCCCATGACCTTATCCTTCC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGGAAGGATTTGGGACTaGGGGAAGAGGGAAGACCGT +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHGRIWD*GKREDR
Trigger: ACGGTCTTCCCTCTTCCCTCAGTCCCAAATCCTTCC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGAAATAGTTGTCGGCTaGCTACAGATGCTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPEIVVG*LQMLCP
Trigger: AGGGCACAGCATCTGTAGTCAGCCGACAACTATTTC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGCCCCGTTCACATTCTaGTGCCGCCATCGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVAPFTF*CRHRSR
Trigger: CCGGGAGCGATGGCGGCAGCAGAATGTGAACGGGGC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTCCCATGGGCTTAGATaGAGGTCACAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHSHGLR*RSQTGL
Trigger: GAGGCCTGTCTGTGACCTGCATCTAAGCCCATGGGA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTCAAAGGCAGGAGAATTaGCTGAAGCCAGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTQRQEN*LKPGLQ
Trigger: TTGAAGTCCTGGCTTCAGGCAATTCTCCTGCCTTTG...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGCTGCGGTGTGGTCCTaGGCGATCTGCCGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPAAVWS*AICRAQ
Trigger: TTGGGCGCGGCAGATCGCCCAGGACCACACCGCAGC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTCCCGTCCCTCTAGCTaGGGGTCACTGCGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATSRPSS*GSLRAA
Trigger: GGCGGCTCGCAGTGACCCCCAGCTAGAGGGACGGGA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCTGCACAGCTCGGTGGTaGGCACCCGATGGCGCGCTT +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVCTARW*APDGAL
Trigger: AAGCGCGCCATCGGGTGCCCACCACCGAGCTGTGCA...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGTGCCCTCCTCCTCCTaGTCATTGAGCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAVPSSS*SLSSLA
Trigger: GGCCAAGCTGCTCAATGACCAGGAGGAGGAGGGCAC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGGGAGCTGCCGCAGCTaGAGTTGGGGGAAAGCACGT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLGSCRS*SWGKAR
Trigger: ACGTGCTTTCCCCCAACTCCAGCTGCGGCAGCTCCC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTATCTGGCAAGCTGGATaGATCAACATAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPIWQAG*INIGLG
Trigger: ACCCAGGCCTATGTTGATCCATCCAGCTTGCCAGAT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCAGCATCTGGCAAGCTaGATGGATCAACATAGGCCT +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPQHLAS*MDQHRP
Trigger: AGGCCTATGTTGATCCATCCAGCTTGCCAGATGCTG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTCCCTTCAGTGGTTATaGTCATCTTTGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGSLQWL*SSLFSK
Trigger: TTTTGAGAACAAAGATGACCATAACCACTGAAGGGA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGTTCCCCCTTTTTCGCTaGGAGGCCTGCAGTTACGCT +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGFPLFR*EACSYA
Trigger: AGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAA...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATCACCCCACCTGCCCTaGAGCCCACCATCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPSPHLP*SPPSQQ
Trigger: CTGCTGGGATGGTGGGCTTCAGGGCAGGTGGGGTGA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATCCAGGCCAAAAGCAGTaGCAACTCCAGCCTCTTACT +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHPGQKQ*QLQPLT
Trigger: AGTAAGAGGCTGGAGTTGTCACTGCTTTTGGCCTGG...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGCACCTCGAGGCTTGTaGCTCTGCAGCATCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAAPRGL*LCSIWQ
Trigger: TTGCCAGATGCTGCAGAGTCACAAGCCTCGAGGTGC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCCAGGGCCTGGTCTCTaGTTGGATTTCCCATACCCT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCPGPGL*LDFPYP
Trigger: AGGGTATGGGAAATCCAATCAGAGACCAGGCCCTGG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGACAAGCCACTAGGCTaGAGCCCAAACTATAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHDKPLG*SPNYKG
Trigger: CCCCTTATAGTTTGGGCTTCAGCCTAGTGGCTTGTC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGGCTGCAGACAGCAATaGTGGCACCACTGTACTCCA +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGGCRQQ*WHHCTP
Trigger: TGGAGTACAGTGGTGCCATCATTGCTGTCTGCAGCC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGCACACCCGGGTCTTTaGTTTCCCCCTTTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGAHPGL*FPPFSL
Trigger: CAGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCTAGCTGGGGGTCACTaGGAGCCGCCTCGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPLAGGH*EPPRSA
Trigger: CGCCGAGCGAGGCGGCTCGCAGTGACCCCCAGCTAG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGCGGGAGGACTCAGCTaGACCATGCGGCCGTCGCCG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPAGGLS*TMRPSP
Trigger: CGGCGACGGCCGCATGGTGCAGCTGAGTCCTCCCGC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGGGGAAAGCACGTCTTaGAGGAGGTCATCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQGESTS*RRSSGG
Trigger: GCCCCCAGATGACCTCCTGCAAGACGTGCTTTCCCC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGAGTTGAAGCCCACATaGCCAAAATATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTELKPT*PKYLLL
Trigger: GAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCATAGGACAGGTTTTGTaGTCAATTCGGAACATAGAC +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFIGQVL*SIRNID
Trigger: GTCTATGTTCCGAATTGAGCACAAAACCTGTCCTAT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGTCGTGGACTCAGGCTaGGAAACCCCACTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAVVDSG*ETPLQD
Trigger: ATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGAC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTCGAACCCTCCAACTaGGATCGGTCTGGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHFEPSN*DRSGSV
Trigger: CACTGAACCAGACCGATCCCAGTTGGAGGGTTCGAA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTAGAAATGGGGGTCAATaGCTGGGAATTACCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPRNGGQ*LGITSC
Trigger: ACAGGAGGTAATTCCCAGCCATTGACCCCCATTTCT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCTGTCCGGGGGATGTGTaGGGATCAGCTTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLCPGDV*GSACGA
Trigger: AGCTCCGCAAGCTGATCCCCACACATCCCCCGGACA...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTGTCCGGGGGATGTGTaGGGATCAGCTTGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQCPGDV*GSACGA
Trigger: AGCTCCGCAAGCTGATCCCCACACATCCCCCGGACA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGTGCCCTCCTCCTCCTaGTCATTGAGCAGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQVPSSS*SLSSLA
Trigger: GGCCAAGCTGCTCAATGACCAGGAGGAGGAGGGCAC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGTCCTTGCCAGTCTTaGCCCGCTGGGTGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGPCQS*PAGCPP
Trigger: AGGAGGGCACCCAGCGGGCCAAGACTGGCAAGGACC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCGGCGGCAGGCAGCATaGCAGGATGGAGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPRRQAA*QDGGCG
Trigger: CCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCGAAATGGGCAGCTATTaGGTACCTATAAATATGGAC +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFEMGSY*VPINMD
Trigger: GTCCATATTTATAGGTACCCAATAGCTGCCCATTTC...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTGTGATTCCCTTCAGTaGTTATGGTCATCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GSRTIEITSTARPTPKRPCDSLQ*LWSSLF
Trigger: GAACAAAGATGACCATAACCACTGAAGGGAATCACA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGCTCCCGGCTGTTGGTaGAGATACGCCGCACAACTT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLAPGCW*RYAAQL
Trigger: AAGTTGTGCGGCGTATCTTCACCAACAGCCGGGAGC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGCTTGGCCAAGAAGTTaGTATACTTCATGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHAWPRS*YTSWPG
Trigger: GCCTGGCCATGAAGTATATCAACTTCTTGGCCAAGC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCTGTCTGTACATGGCTaGATTAGGGCCCCATCATGG +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCLSVHG*IRAPSW
Trigger: CCATGATGGGGCCCTAATTCAGCCATGTACAGACAG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGTACTCCAGCCTGAGTaGCAGAACAAGACACCGTCT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCVLQPE*QNKTPS
Trigger: AGACGGTGTCTTGTTCTGTCACTCAGGCTGGAGTAC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGTACTCCAGCCTGAGTaGCAGAACAAGACACCGTCT +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGVLQPE*QNKTPS
Trigger: AGACGGTGTCTTGTTCTGTCACTCAGGCTGGAGTAC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGACTCAGCTGCACCATaGGGCCGTCGCCGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPDSAAP*GRRRAA
Trigger: AGCTGCCCGGCGACGGCCGCATGGTGCAGCTGAGTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGTGTGGGGATCAGCTTaGGGAGCTCGGCAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATVWGSA*GARQRP
Trigger: GGGCCTTTGCCGAGCTCCGCAAGCTGATCCCCACAC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGAATTCTCACCCCACCTaGCCTGAAGCCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQNSHPT*PEAHHP
Trigger: GGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATCATTGTCCCTTTCTCTaGCTTCACACAAAGCCCGAC +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHHCPFL*LHTKPD
Trigger: GTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATG...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGAGTTGAAGCCCACATaGCCAAAATATCTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPELKPT*PKYLLL
Trigger: GAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTCCCATGGGCTTAGATaGAGGTCACAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARASHGLR*RSQTGL
Trigger: GAGGCCTGTCTGTGACCTGCATCTAAGCCCATGGGA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCACAGTGATGAGTTCTTaGATGGCAGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCTVMSS*MAGQGH
Trigger: GTGGCCCTGTCCTGCCATGCAAGAACTCATCACTGT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGTCGTGGACTCAGGCTaGGAAACCCCACTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLVVDSG*ETPLQD
Trigger: ATCCTGCAGTGGGGTTTCGCAGCCTGAGTCCACGAC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTAAAGACCTAAAGACTTaGCCTTTCCTACCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPKDLKT*PFLPGL
Trigger: CAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCGCCCACAGAAACAATaGACTATGTACACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGRPQKQ*TMYTGR
Trigger: CCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCCAGTCTTGGCCCGCTaGGTGCCCTCCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPPVLAR*VPSSSW
Trigger: CCAGGAGGAGGAGGGCACCCAGCGGGCCAAGACTGG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGGGAGCTGCCGCAGCTaGAGTTGGGGGAAAGCACGT +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPGSCRS*SWGKAR
Trigger: ACGTGCTTTCCCCCAACTCCAGCTGCGGCAGCTCCC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCTAAGAACGCCCTCCTaGCTGATCCTGGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVLRTPS*LILVAQ
Trigger: CTGGGCCACCAGGATCAGCCAGGAGGGCGTTCTTAG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCGCCCATCAGCACACTaGCATTCACTCGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIRPSAH*HSLASM
Trigger: CATGCTGGCGAGTGAATGCCAGTGTGCTGATGGGCG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGAGGAGAATGCACAGATaGGGCTGCGCATCTACTCAG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGRRMHR*GCASTQ
Trigger: CTGAGTAGATGCGCAGCCCCATCTGTGCATTCTCCT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGTCTTAGCCAGGGCCTaGTCTCTGATTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCVLARA*SLIGFP
Trigger: GGGAAATCCAATCAGAGACCAGGCCCTGGCTAAGAC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCTACTGCCTAGGTCGTaGACTCAGGCTGCGAAACCC +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTILLPRS*TQAAKP
Trigger: GGGTTTCGCAGCCTGAGTCCACGACCTAGGCAGTAG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGTGGCTCACACCTGTaGTCCTCCCTACTCGGGAGG +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGGSHL*SSLLGR
Trigger: CCTCCCGAGTAGGGAGGACCACAGGTGTGAGCCACC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTCCCTTCAGTGGTTATaGTCATCTTTGTTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFSLQWL*SSLFSK
Trigger: TTTTGAGAACAAAGATGACCATAACCACTGAAGGGA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGACACACCCACAGTGTTaGCCTCTGGGCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGTHPQC*PLGCTK
Trigger: CTTTGTACAGCCCAGAGGCCAACACTGTGGGTGTGT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 72 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTaGACGGAAAGTGCTGGGCCCGCCCACAGAAACAAT +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTT*TESAGPAHRNN
Trigger: ATTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCTTCCCCCTTTTTCGCTaGGAGGCCTGCAGTTACGCT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLFPLFR*EACSYA
Trigger: AGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAA...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGCTTGGCCAAGAAGTTaGTATACTTCATGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCAWPRS*YTSWPG
Trigger: GCCTGGCCATGAAGTATATCAACTTCTTGGCCAAGC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGCCTCAGATGAGAGCTaGCAACCCCAGGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQASDES*QPQVLG
Trigger: TCCTAAGACCTGGGGTTGTCAGCTCTCATCTGAGGC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGTGATGTCGAGGAGTTaGAGCCCACATGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGVMSRS*SPHAQN
Trigger: ATTTTGGGCATGTGGGCTTCAACTCCTCGACATCAC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGACACAGGAAATCAATaGAGGGGCAGTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHDTGNQ*RGSGSF
Trigger: GAATGAACCACTGCCCCTTCATTGATTTCCTGTGTC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGGGAGAGGGCTAGGGTaGCTTAAGGGTACAATGACA +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAGRGLG*LKGTMT
Trigger: TGTCATTGTACCCTTAAGTCACCCTAGCCCTCTCCC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGATGCACAGATGGGGCTaGGCATCTACTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQMHRWG*ASTQHQ
Trigger: CTGGTGCTGAGTAGATGCGCAGCCCCATCTGTGCAT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATGGGGAGCACTTCTATTaGATTAAACCAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHGEHFY*IKPTSQ
Trigger: CTGGGAGGTTGGTTTAATGCAATAGAAGTGCTCCCC...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCAACTGGGATCGGTCTaGTTCAGTGTTTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPQLGSV*FSVCFL
Trigger: TAGAAAACAAACACTGAACCAGACCGATCCCAGTTG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCAACCTGCAGGTGTTTaGAGCCTTTCCTCTACCCCC +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIQPAGV*SLSSTP
Trigger: GGGGGTAGAGGAAAGGCTCCAAACACCTGCAGGTTG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGCCGCTCGGTCATCCTaGGGCATATTTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIAARSS*GIFRET
Trigger: GGTCTCTCTAAATATGCCCCAGGATGACCGAGCGGC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCGCCCATCAGCACACTaGCATTCACTCGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVRPSAH*HSLASM
Trigger: CATGCTGGCGAGTGAATGCCAGTGTGCTGATGGGCG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGTTGACGGAAAGTGCTaGGCCCGCCCACAGAAACAA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQVDGKC*ARPQKQ
Trigger: TTGTTTCTGTGGGCGGGCCCAGCACTTTCCGTCAAC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCACAGTGTTGGCCTCTaGGCTGTACAAAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAHSVGL*AVQRSR
Trigger: CCTTGACCTTTGTACAGCCCAGAGGCCAACACTGTG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGCCAGGCCAAAAGCAGTaGCAACTCCAGCCTCTTACT +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQPGQKQ*QLQPLT
Trigger: AGTAAGAGGCTGGAGTTGTCACTGCTTTTGGCCTGG...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGCTGGATGCCTCAGATaGGAGCTGACAACCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATAGCLR*ELTTPG
Trigger: ACCTGGGGTTGTCAGCTCTCATCTGAGGCATCCAGC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGEKAEL*SPGQEV
Trigger: TACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGACACAGGAAATCAATaGAGGGGCAGTGGTTCATTC +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGDTGNQ*RGSGSF
Trigger: GAATGAACCACTGCCCCTTCATTGATTTCCTGTGTC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTAATTCTCACCCCACCTaGCCTGAAGCCCACCATCCC +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATNSHPT*PEAHHP
Trigger: GGGATGGTGGGCTTCAGGGCAGGTGGGGTGAGAATT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCTCAAGTCCACCGCCTTaGTTCAGAGCCGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVSSPPP*FRAAQF
Trigger: GAATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGA...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCATGCACAGATGGGGCTaGGCATCTACTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVMHRWG*ASTQHQ
Trigger: CTGGTGCTGAGTAGATGCGCAGCCCCATCTGTGCAT...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCGGGGAGCACTTCTATTaGATTAAACCAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCGEHFY*IKPTSQ
Trigger: CTGGGAGGTTGGTTTAATGCAATAGAAGTGCTCCCC...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGACAGTGATGAGTTCTTaGATGGCAGGACAGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQTVMSS*MAGQGH
Trigger: GTGGCCCTGTCCTGCCATGCAAGAACTCATCACTGT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGCTGCGAAACCCCACTaGAGGATTGAGATTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQAAKPH*RIEIEG
Trigger: TCCCTCAATCTCAATCCTGCAGTGGGGTTTCGCAGC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGCTGCGAAACCCCACTaGAGGATTGAGATTGAGGGA +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLAAKPH*RIEIEG
Trigger: TCCCTCAATCTCAATCCTGCAGTGGGGTTTCGCAGC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGCCGCTCGGTCATCCTaGGGCATATTTAGAGAGACC +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVAARSS*GIFRET
Trigger: GGTCTCTCTAAATATGCCCCAGGATGACCGAGCGGC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATGCCGCAGCTGGAGTTaGGGGAAAGCACGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPCRSWS*GKARLA
Trigger: TGCAAGACGTGCTTTCCCCCAACTCCAGCTGCGGCA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCCACCCCAGCCAGCTTaGGAGGGGCTAAAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPPPQPA*EGLKAR
Trigger: CCTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGAAATGGGCAGCTATTaGGTACCTATAAATATGGAC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPEMGSY*VPINMD
Trigger: GTCCATATTTATAGGTACCCAATAGCTGCCCATTTC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGTCTTAGCCAGGGCCTaGTCTCTGATTGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIVLARA*SLIGFP
Trigger: GGGAAATCCAATCAGAGACCAGGCCCTGGCTAAGAC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGAATGTGCATATGTTTaGGTCTTAGCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAECAYV*VLARAW
Trigger: CCAGGCCCTGGCTAAGACCCAAACATATGCACATTC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCAAAGGTCAAGGTACCTaGAGCGGTTACTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCKGQGT*SGYSSS
Trigger: AGAAGAGGAGTAACCGCTCCAGGTACCTTGACCTTT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCACAGTGTTGGCCTCTaGGCTGTACAAAGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLHSVGL*AVQRSR
Trigger: CCTTGACCTTTGTACAGCCCAGAGGCCAACACTGTG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCAGAGACCGGCCCCTCTaGATAGGATCTCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPRDRPL*IGSPLR
Trigger: GCGGAGTGGAGATCCTATTCAGAGGGGCCGGTCTCT...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGTGATGTCGAGGAGTTaGAGCCCACATGCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQVMSRS*SPHAQN
Trigger: ATTTTGGGCATGTGGGCTTCAACTCCTCGACATCAC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCATTCACTCGCCAGCATaGACAGTGATGTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLIHSPA*TVMSRS
Trigger: ACTCCTCGACATCACTGTTCATGCTGGCGAGTGAAT...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGGATCCTGGTCCTATTaGGCGCTAAAGATTCCACCA +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIGSWSY*ALKIPP
Trigger: TGGTGGAATCTTTAGCGCTCAATAGGACCAGGATCC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCCAGGGCCTGGTCTCTaGTTGGATTTCCCATACCCT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATPGPGL*LDFPYP
Trigger: AGGGTATGGGAAATCCAATCAGAGACCAGGCCCTGG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAQKLHN*GVFKVL
Trigger: CAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGAACTGTCTACTTTCATaGTCCCATTCAGTCCACACC +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGNCLLS*SHSVHT
Trigger: GGTGTGGACTGAATGGGATCATGAAAGTAGACAGTT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGTGAGAGGATTGCTTaGGCCCAGAGTTCAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGERIA*AQSSRL
Trigger: CAGCCTTGAACTCTGGGCTCAAGCAATCCTCTCACC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGGGCTTTCTCAGGGCTaGAGACATTGTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPGLSQG*RHCLHS
Trigger: GCTGTGGAGACAATGTCTGCAGCCCTGAGAAAGCCC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATAATGGAGAGCCTGAGTaGTACAAAGGTGAACAATGT +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHNGEPE*YKGEQC
Trigger: ACATTGTTCACCTTTGTAGCACTCAGGCTCTCCATT...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCTATTCTTGGAATGTTaGCAGTTTTTCATGGGTAAC +
Preference number: 4 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPLFLEC*QFFMGN
Trigger: GTTACCCATGAAAAACTGGCAACATTCCAAGAATAG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTCGGCTGACTACAGATaGTGTGCCCTTTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHSADYR*CALCFI
Trigger: AATAAAACAAAGGGCACAGCATCTGTAGTCAGCCGA...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAAACGTTGACGGAAAGTaGTGGGCCCGCCCACAGAAA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPNVDGK*WARPQK
Trigger: TTTCTGTGGGCGGGCCCAGCACTTTCCGTCAACGTT...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCAGGGAGAGAGAGAAATaGGGGTCAATGGCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLREREK*GSMAGN
Trigger: ATTCCCAGCCATTGACCCCCATTTCTCTCTCTCCCT...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCTCCAGCCTCTTACTTaGGAAGGATTTGGGACTGAG +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLLQPLT*EGFGTE
Trigger: CTCAGTCCCAAATCCTTCCCAAGTAAGAGGCTGGAG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCATGGGGCTCACGAAATaGGCAGCTATTGGGTACCTA +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLMGLTK*AAIGYL
Trigger: TAGGTACCCAATAGCTGCCCATTTCGTGAGCCCCAT...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCAGCATCTGGCAAGCTaGATGGATCAACATAGGCCT +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIQHLAS*MDQHRP
Trigger: AGGCCTATGTTGATCCATCCAGCTTGCCAGATGCTG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCTATCTTTAGACAGATaGGGCTCCTCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCLSLDR*GSSQDL
Trigger: AAGATCCTGTGAGGAGCCCCATCTGTCTAAAGATAG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCACACACCCACAGTGTTaGCCTCTGGGCTGTACAAAG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVTHPQC*PLGCTK
Trigger: CTTTGTACAGCCCAGAGGCCAACACTGTGGGTGTGT...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGCTCCCGGCTGTTGGTaGAGATACGCCGCACAACTT +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPAPGCW*RYAAQL
Trigger: AAGTTGTGCGGCGTATCTTCACCAACAGCCGGGAGC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGCAAAAGCTGCACAACTaGGGGGTGTTTAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQQKLHN*GVFKVL
Trigger: CAGAACCTTAAACACCCCTCAGTTGTGCAGCTTTTG...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGACTTAAGGGTACAATaGCAGACATACAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGDLRVQ*QTYRTS
Trigger: AGAAGTCCTGTATGTCTGTCATTGTACCCTTAAGTC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCAAAGGTGAACAATGTTaGCCCAAGCTCGAGAATTGG +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAKGEQC*PKLENW
Trigger: CCAATTCTCGAGCTTGGGGCAACATTGTTCACCTTT...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCAATGGAGAGCCTGAGTaGTACAAAGGTGAACAATGT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCNGEPE*YKGEQC
Trigger: ACATTGTTCACCTTTGTAGCACTCAGGCTCTCCATT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCAAAGGCAGGAGAATTaGCTGAAGCCAGGACTTCAA +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLQRQEN*LKPGLQ
Trigger: TTGAAGTCCTGGCTTCAGGCAATTCTCCTGCCTTTG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCACGCCCACAGAAACAATaGACTATGTACACGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPRPQKQ*TMYTGR
Trigger: CCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCG...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGGCCTGGTCTCTGATTaGATTTCCCATACCCTAGAA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQGLVSD*ISHTLE
Trigger: TTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAAGTTACGCTGCGGTGTaGTCCTGGGCGATAGAATCA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPSYAAV*SWAIES
Trigger: TGATTCTATCGCCCAGGACCACACCGCAGCGTAACT...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371884.6
CDS-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGAGCAGACTGTCCACTaGTCATCTTCTTCAACCAGG +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPEQTVH*SSSSTR
Trigger: CCTGGTTGAAGAAGATGATCAGTGGACAGTCTGCTC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGAGAAAGCAGAACTTTaGTCCCCAGGGCAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVEKAEL*SPGQEV
Trigger: TACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCGCCAGCATGAACAGTaGTGTCGAGGAGTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPRQHEQ*CRGVEA
Trigger: GGCTTCAACTCCTCGACATCACTGTTCATGCTGGCG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCTCCCACCATCTGGATTaGCACAGGAAATCAATGAAG +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLSHHLD*HRKSMK
Trigger: CTTCATTGATTTCCTGTGTCAATCCAGATGGTGGGA...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGCACACCCGGGTCTTTaGTTTCCCCCTTTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPAHPGL*FPPFSL
Trigger: CAGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTCAAGTCCACCGCCTTaGTTCAGAGCCGCCCAATTC +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPSSPPP*FRAAQF
Trigger: GAATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCATAGGACAGGTTTTGTaGTCAATTCGGAACATAGAC +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCIGQVL*SIRNID
Trigger: GTCTATGTTCCGAATTGAGCACAAAACCTGTCCTAT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCAAAGGTGAACAATGTTaGCCCAAGCTCGAGAATTGG +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLKGEQC*PKLENW
Trigger: CCAATTCTCGAGCTTGGGGCAACATTGTTCACCTTT...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCACATTTTACACAGTCTaGCAGTGTTCCCATATCTCT +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCTFYTV*QCSHIS
Trigger: AGAGATATGGGAACACTGGCAGACTGTGTAAAATGT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCGGTTACTCCTCTTCTaGAGAAAAATGCAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIRLLLF*RKMQRP
Trigger: TGGTCTCTGCATTTTTCTGCAGAAGAGGAGTAACCG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCGCACAACTTTGGTGTaGGGACCATCAGTAATCTCC +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATRTTLV*GPSVIS
Trigger: GGAGATTACTGATGGTCCCCACACCAAAGTTGTGCG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGTTTCTGATCTCCTACTaGTACAGGAAACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: QRPTQFITYSTTLTESAGFLISY*YRKQKS
Trigger: GCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAA...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTATCTGGCAAGCTGGATaGATCAACATAGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATIWQAG*INIGLG
Trigger: ACCCAGGCCTATGTTGATCCATCCAGCTTGCCAGAT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 72 bp CCAAAATATCTCTTGCTCCATATCACTCTACTATCATaGTCCCTTTCTCTGCCTTCACACAAAGCCCGACAG +
Preference number: 4 (lower is better)
Translates to: PKYLLLHITLLS*SLSLPSHKARQ
Trigger: CTGTCGGGCTTTGTGTGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 72 bp AGACCTAAAGACTTGCCCTTTCCTACCAGGCTTGTTTaGGGTAGTTGCATTACATTTTACACAGTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RPKDLPFPTRLV*GSCITFYTVCQ
Trigger: CTGGCAGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTTTGCTCCATTTTTCTaGTCTCCTACTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQFAPFF*SPTGTG
Trigger: TCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGACAAGCCACTAGGCTaGAGCCCAAACTATAAGGGG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPDKPLG*SPNYKG
Trigger: CCCCTTATAGTTTGGGCTTCAGCCTAGTGGCTTGTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCAAGTACCTACCACTTTaGTCCATTTTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARAKYLPL*SIFLIS
Trigger: GGAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTT...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTCCCCTTTGTACAGATaGTATTCTTGGAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQSPLYR*YSWNVA
Trigger: GGCAACATTCCAAGAATAGCATCTGTACAAAGGGGA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGAAGGCAAGTCTCATTaGGGAGAAAGCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVEGKSH*GESRTL
Trigger: CAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCCCAAGCTCGAGAATTaGACCTTACTTAAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIPKLEN*TLLKRK
Trigger: CTTCCTTTTAAGTAAGGTCCAATTCTCGAGCTTGGG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCGGATCTTCCAAACGTTaGAAAGGAACCAACCCTAAT +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIGSSKR*KGTNPN
Trigger: ATTAGGGTTGGTTCCTTTCCAACGTTTGGAAGATCC...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCATTCACTCGCCAGCATaGACAGTGATGTCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPIHSPA*TVMSRS
Trigger: ACTCCTCGACATCACTGTTCATGCTGGCGAGTGAAT...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGATTCCACCAATAACTaGAGTCAAGCAAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARADSTNN*SQAKIP
Trigger: TGGAATTTTTGCTTGACTTCAGTTATTGGTGGAATC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGACTTAAGGGTACAATaGCAGACATACAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVDLRVQ*QTYRTS
Trigger: AGAAGTCCTGTATGTCTGTCATTGTACCCTTAAGTC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGAAGTACCTACCACTTTaGTCCATTTTTCTGATCTCC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQKYLPL*SIFLIS
Trigger: GGAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGACATTTTACACAGTCTaGCAGTGTTCCCATATCTCT +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQTFYTV*QCSHIS
Trigger: AGAGATATGGGAACACTGGCAGACTGTGTAAAATGT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTAAAGACCTAAAGACTTaGCCTTTCCTACCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATKDLKT*PFLPGL
Trigger: CAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTT...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCTATTCTTGGAATGTTaGCAGTTTTTCATGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VFKVLLSECAYVWVLARALFLEC*QFFMGN
Trigger: GTTACCCATGAAAAACTGGCAACATTCCAAGAATAG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCTTTCTGATCTCCTACTaGTACAGGAAACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLFLISY*YRKQKS
Trigger: GCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAA...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCTCAATGAAGGGGCAGTaGTTCATTCTACAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: GVEAHMPKISLAPYHSTISMKGQ*FILQKD
Trigger: ATCCTTTTGTAGAATGAACCACTGCCCCTTCATTGA...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTCTATCTTTAGACAGATaGGGCTCCTCACAGGATCTT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATLSLDR*GSSQDL
Trigger: AAGATCCTGTGAGGAGCCCCATCTGTCTAAAGATAG...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCTACTGTCCCTGGCCTTaGAACAAGATAGAAATTAAG +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLYCPWP*NKIEIK
Trigger: CTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGAAGGATAAGGTCATaGGGTACAGAGGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGRIRS*GTEGEN
Trigger: ATTTTCACCCTCTGTACCCCATGACCTTATCCTTCC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCTACAGATGCTATTCTTaGAATGTTGCCAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCYRCYS*NVASFS
Trigger: TGAAAAACTGGCAACATTCCAAGAATAGCATCTGTA...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTGTGATTCCCTTCAGTaGTTATGGTCATCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQCDSLQ*LWSSLF
Trigger: GAACAAAGATGACCATAACCACTGAAGGGAATCACA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATTTGCTCCATTTTTCTaGTCTCCTACTGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPFAPFF*SPTGTG
Trigger: TCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR TCA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGGATTCCACCAATAACTaGAGTCAAGCAAAAATTCCA +
Preference number: 4 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQDSTNN*SQAKIP
Trigger: TGGAATTTTTGCTTGACTTCAGTTATTGGTGGAATC...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTTGATGACCAAAAGCTaGACAACTGAGGGGTGTTTA +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATLMTKS*TTEGCL
Trigger: TAAACACCCCTCAGTTGTGCAGCTTTTGGTCATCAA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTCTAAATTACCCAAATaGTGGGCAGTCAGGCACACC +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPSKLPK*WAVRHT
Trigger: GGTGTGCCTGACTGCCCAGCATTTGGGTAATTTAGA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATCCCCTTTGTACAGATaGTATTCTTGGAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPSPLYR*YSWNVA
Trigger: GGCAACATTCCAAGAATAGCATCTGTACAAAGGGGA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR GCA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCTCTTCTGCAGAAAAATaGAGAGACCAACGCAATTCA +
Preference number: 4 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVSSAEK*RDQRNS
Trigger: TGAATTGCGTTGGTCTCTGCATTTTTCTGCAGAAGA...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGATCTTCCAAACGTTaGAAAGGAACCAACCCTAAT +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGSSKR*KGTNPN
Trigger: ATTAGGGTTGGTTCCTTTCCAACGTTTGGAAGATCC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCTACCAGGCTTGTTTTaGGTAGTTGCATTACATTTT +
Preference number: 4 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLLPGLF*VVALHF
Trigger: AAAATGTAATGCAACTACCCAAAACAAGCCTGGTAG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGAAGGCAAGTCTCATTaGGGAGAAAGCAGAACTTTG +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPEGKSH*GESRTL
Trigger: CAAAGTTCTGCTTTCTCCCCAATGAGACTTGCCTTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATCAATGAAGGGGCAGTaGTTCATTCTACAAAAGGAT +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPSMKGQ*FILQKD
Trigger: ATCCTTTTGTAGAATGAACCACTGCCCCTTCATTGA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTACTGTCCCTGGCCTTaGAACAAGATAGAAATTAAG +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATYCPWP*NKIEIK
Trigger: CTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTCTTATTACTGTCCCTaGCCTTGGAACAAGATAGAA +
Preference number: 4 (lower is better)
Translates to: KICDPSHKTHPPIHTVATSYYCP*PWNKIE
Trigger: TTCTATCTTGTTCCAAGGCCAGGGACAGTAATAAGA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 72 bp TACAAAGACCTAAAGACTTGCCCTTTCCTACCAGGCTaGTTTTGGGTAGTTGCATTACATTTTACACAGTCT +
Preference number: 4 (lower is better)
Translates to: YKDLKTCPFLPG*FWVVALHFTQS
Trigger: AGACTGTGTAAAATGTAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCACTACCAGGCTTGTTTTaGGTAGTTGCATTACATTTT +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPLPGLF*VVALHF
Trigger: AAAATGTAATGCAACTACCCAAAACAAGCCTGGTAG...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
3UTR CAA 72 bp CCTTTATGTTCTTTCCCCTTTGTACAGATGCTATTCTaGGAATGTTGCCAGTTTTTCATGGGTAACAAGGAA +
Preference number: 4 (lower is better)
Translates to: PLCSFPFVQMLF*ECCQFFMGNKE
Trigger: TTCCTTGTTACCCATGAAAAACTGGCAACATTCCAAGAATAGCATCTGTACAAAGGGGAAAGAACATAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTCTTATTACTGTCCCTaGCCTTGGAACAAGATAGAA +
Preference number: 4 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPSYYCP*PWNKIE
Trigger: TTCTATCTTGTTCCAAGGCCAGGGACAGTAATAAGA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CCA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATACAGATGCTATTCTTaGAATGTTGCCAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPYRCYS*NVASFS
Trigger: TGAAAAACTGGCAACATTCCAAGAATAGCATCTGTA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp CCCCGGGCCTCCGCGCGCGCCCAGTTCGATGACTGGGGGCTCCGCTaGGGCCGCGCGGCTCGTCTCCTTGGCGACGCCGTTCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: PRASARAQFDDWGLR*GRAARLLGDAVQQD
Trigger: GTCCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCGCGGCCGCAGCGGAGCCCCCAGTCATCGAACTGGGCGCGCGCGGAGGCCCGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp CCATGCTGGCCTCGGCCGCGTCCCGTCCCTCTAGCTGGGGGTCACTaGGAGCCGCCTCGCTCGGCGGCCGCTCGGTCATCCTGGGGCATA +
Preference number: 5 (lower is better)
Translates to: PCWPRPRPVPLAGGH*EPPRSAAARSSWGI
Trigger: TATGCCCCAGGATGACCGAGCGGCCGCCGAGCGAGGCGGCTCGCAGTGACCCCCAGCTAGAGGGACGGGACGCGGCCGAGGCCAGCATGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp GAGGGCCGGCTCCATCGGCGGCAGGCAGCATGGCAGGATGGAGGCTaGGGGCCGTGTGCTTGGGCGCGGGCTCCTCCGTGTAGCTGTCCG +
Preference number: 5 (lower is better)
Translates to: EGRLHRRQAAWQDGG*GPCAWARAPPCSCP
Trigger: CGGACAGCTACACGGAGGAGCCCGCGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCGATGGAGCCGGCCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS CCA 90 bp CCCAGACCCATCACCGAGGGCCGGCTCCATCGGCGGCAGGCAGCATaGCAGGATGGAGGCTGCGGGCCGTGTGCTTGGGCGCGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: PRPITEGRLHRRQAA*QDGGCGPCAWARAP
Trigger: AGGAGCCCGCGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCGATGGAGCCGGCCCTCGGTGATGGGTCTGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS GCA 90 bp GAAGCCCGCAGCTACCGGCTCGAAGGCGCCGGCCTCGGCGAGCGCTaGTCAGCTTCAAGCCTGGAGGAGCCTCCCACTCACCAACGAACC +
Preference number: 5 (lower is better)
Translates to: EARSYRLEGAGLGER*SASSLEEPPTHQRT
Trigger: GGTTCGTTGGTGAGTGGGAGGCTCCTCCAGGCTTGAAGCTGAGCAGCGCTCGCCGAGGCCGGCGCCTTCGAGCCGGTAGCTGCGGGCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481091.1
CDS CCA 90 bp CCCCCACCAGCCCCCACCACAGGGTCCTTGCCAGTCTTGGCCCGCTaGGTGCCCTCCTCCTCCTGGTCATTGAGCAGCTTGGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: PPPAPTTGSLPVLAR*VPSSSWSLSSLAKK
Trigger: CTTCTTGGCCAAGCTGCTCAATGACCAGGAGGAGGAGGGCACCCAGCGGGCCAAGACTGGCAAGGACCCTGTGGTGGGGGCTGGTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS CCA 90 bp ACCTGCCCTGAAGCCCACCATCCCAGCAGCCTAAGAACGCCCTCCTaGCTGATCCTGGTGGCCCAGACCCATCACCGAGGGCCGGCTCCA +
Preference number: 5 (lower is better)
Translates to: TCPEAHHPSSLRTPS*LILVAQTHHRGPAP
Trigger: TGGAGCCGGCCCTCGGTGATGGGTCTGGGCCACCAGGATCAGCCAGGAGGGCGTTCTTAGGCTGCTGGGATGGTGGGCTTCAGGGCAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS CCA 90 bp GGCTCGAAGGCGCCGGCCTCGGCGAGCGCTGCTCAGCTTCAAGCCTaGAGGAGCCTCCCACTCACCAACGAACCCCTCAAACACCTAGGC +
Preference number: 5 (lower is better)
Translates to: GSKAPASASAAQLQA*RSLPLTNEPLKHLG
Trigger: GCCTAGGTGTTTGAGGGGTTCGTTGGTGAGTGGGAGGCTCCTCCAGGCTTGAAGCTGAGCAGCGCTCGCCGAGGCCGGCGCCTTCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481091.1
CDS-3UTR CAA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCCTGCCGCAGCTGGAGTaGGGGGAAAGCACGTCTTGC +
Preference number: 5 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGLPQLE*GESTSC
Trigger: GCAAGACGTGCTTTCCCCCAACTCCAGCTGCGGCAG...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp GGTCTTTGCTTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGATCTGCCGCGCCCAAAGCGAGTTTCC +
Preference number: 5 (lower is better)
Translates to: GLCFPPFSLRGLQLR*GVVLGDLPRPKRVS
Trigger: GGAAACTCGCTTTGGGCGCGGCAGATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAAGCAAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000465912.1
CDS-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGTGTGGGGATCAGCTaGCGGAGCTCGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFCVGIS*RSSAKA
Trigger: GGCCTTTGCCGAGCTCCGCAAGCTGATCCCCACACA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTCCTCCTCCTGGTCATaGAGCAGCTTGGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGSSSWS*SSLAKK
Trigger: CTTCTTGGCCAAGCTGCTCAATGACCAGGAGGAGGA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCCTGCGGGCCGTGTGCTaGGGCGCGGGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCLRAVC*GAGSSV
Trigger: CACGGAGGAGCCCGCGCCCAAGCACACGGCCCGCAG...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCTTCAAGTCCACCGCCTaGCTTCAGAGCCGCCCAATT +
Preference number: 5 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGFKSTA*LQSRPI
Trigger: AATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGAA...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGCACACCCGGGTCTTaGCTTTCCCCCTTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFCTPGS*LSPFFA
Trigger: AGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGCA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGGGTCCTTGCCAGTCTaGGCCCGCTGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGGSLPV*ARWVPS
Trigger: GGAGGGCACCCAGCGGGCCAAGACTGGCAAGGACCC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATCCCACCACAGGGTCCTaGCCAGTCTTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHPTTGS*PVLARW
Trigger: CCAGCGGGCCAAGACTGGCAAGGACCCTGTGGTGGG...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCTGCCGCAGCTGGAGTaGGGGGAAAGCACGTCTTGC +
Preference number: 5 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPLPQLE*GESTSC
Trigger: GCAAGACGTGCTTTCCCCCAACTCCAGCTGCGGCAG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTTCAAGTCCACCGCCTaGCTTCAGAGCCGCCCAATT +
Preference number: 5 (lower is better)
Translates to: GSRTIEITSTARPTPKRPFKSTA*LQSRPI
Trigger: AATTGGGCGGCTCTGAAGCAAGGCGGTGGACTTGAA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCCTCCCAGACGCACCCTaGATGACCAAAAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFLPDAP*MTKSCT
Trigger: TGTGCAGCTTTTGGTCATCAAGGGTGCGTCTGGGAG...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCATACGCCGCACAACTTaGGTGTGGGGACCATCAGTA +
Preference number: 5 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFIRRTT*VWGPSV
Trigger: TACTGATGGTCCCCACACCAAAGTTGTGCGGCGTAT...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGATACGCCGCACAACTTaGGTGTGGGGACCATCAGTA +
Preference number: 5 (lower is better)
Translates to: GSRTIEITSTARPTPKRPIRRTT*VWGPSV
Trigger: TACTGATGGTCCCCACACCAAAGTTGTGCGGCGTAT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCAGCTTGGCCAAGAAGTaGATATACTTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGSLAKK*IYFMAR
Trigger: CCTGGCCATGAAGTATATCAACTTCTTGGCCAAGCT...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCTGCGGGCCGTGTGCTaGGGCGCGGGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVLRAVC*GAGSSV
Trigger: CACGGAGGAGCCCGCGCCCAAGCACACGGCCCGCAG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGATGGGGCTGCGCATCTACTCAGCACCAGCGTACGCCCATCAGCACACTGGCCAAAGACCTAAAGACTaGCCCTTTCCTACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: QMGLRIYSAPAYAHQHTGQRPKD*PFPTRL
Trigger: AAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTG...GCCAGTGTGCTGATGGGCGTACGCTGGTGCTGAGTAGATGCGCAGCCCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp GGTCTTTGCTTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGATAGAATCAGATCCCTGCTGAGAACA +
Preference number: 5 (lower is better)
Translates to: GLCFPPFSLRGLQLR*GVVLGDRIRSLLRT
Trigger: TGTTCTCAGCAGGGATCTGATTCTATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAAGCAAAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGCCACCCCAGCCAGCTaGGGAGGGGCTAAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGATPAS*GGAKGK
Trigger: CTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGTGGATCCTGGTCCTATaGAGCGCTAAAGATTCCACC +
Preference number: 5 (lower is better)
Translates to: GSRTIEITSTARPTPKRPWILVL*SAKDST
Trigger: GGTGGAATCTTTAGCGCTCAATAGGACCAGGATCCA...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGCGCGGCTCGTCTCCTaGGCGACGCCGTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVARLVS*ATPFSR
Trigger: CCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCGC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCACACACCCACAGTGTaGGCCTCTGGGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPHTPTV*ASGLYK
Trigger: TTTGTACAGCCCAGAGGCCAACACTGTGGGTGTGTG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCAGCGCGGCTCGTCTCCTaGGCGACGCCGTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPARLVS*ATPFSR
Trigger: CCTGCTGAACGGCGTCGCCAAGGAGACGAGCCGCGC...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTGGGTCCTTGCCAGTCTaGGCCCGCTGGGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KICDPSHKTHPPIHTVATGSLPV*ARWVPS
Trigger: GGAGGGCACCCAGCGGGCCAAGACTGGCAAGGACCC...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCCCACCACAGGGTCCTaGCCAGTCTTGGCCCGCTGG +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVPTTGS*PVLARW
Trigger: CCAGCGGGCCAAGACTGGCAAGGACCCTGTGGTGGG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCGCCACCCCAGCCAGCTaGGGAGGGGCTAAAGGCAAG +
Preference number: 5 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLATPAS*GGAKGK
Trigger: CTTGCCTTTAGCCCCTCCCAAGCTGGCTGGGGTGGC...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAATAGTTGTCGGCTGACTGGAGAAAGCAGAACTTaGATCCCCAGGGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: SQVRPDPPPKGRNSCRLTGESRT*IPRARS
Trigger: ACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTCC...AGTCAGCCGACAACTATTTCGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCTGTGTGGGGATCAGCTaGCGGAGCTCGGCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: GVEAHMPKISLAPYHSTICVGIS*RSSAKA
Trigger: GGCCTTTGCCGAGCTCCGCAAGCTGATCCCCACACA...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTAGTGATGTCGAGGAGTaGAAGCCCACATGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPSDVEE*KPTCPK
Trigger: TTTTGGGCATGTGGGCTTCAACTCCTCGACATCACT...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS CCA 90 bp ACAGGCTGTCTGGAACATTTTCGAACCCTCCAACTGGGATCGGTCTaGTTCAGTGTTTGTTTTCTAAGCAGGGAGGTGTCTACGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TGCLEHFRTLQLGSV*FSVCFLSREVSTRL
Trigger: CAACCGCGTAGACACCTCCCTGCTTAGAAAACAAACACTGAACCAGACCGATCCCAGTTGGAGGGTTCGAAAATGTTCCAGACAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGAAAGTACCTACCACTTaGCTCCATTTTTCTGATCTC +
Preference number: 5 (lower is better)
Translates to: GSRTIEITSTARPTPKRPKVPTT*LHFSDL
Trigger: GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTT...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TGGGCCCGCCCACAGAAACAATGCACTATGTACACGGGCAGGGGGCAAGTCTTCTGCCCAAAATATCTCTaGCTCCATATCACTCTACTA +
Preference number: 5 (lower is better)
Translates to: WARPQKQCTMYTGRGQVFCPKYL*LHITLL
Trigger: TAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCA...GAAGACTTGCCCCCTGCCCGTGTACATAGTGCATTGTTTCTGTGGGCGGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGTCACGTACCATCGAAATCACAAGTACGGCCAGACCCACCCCCAAAAGGCCGGTACAGATGCTATTCTaGGAATGTTGCCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: GSRTIEITSTARPTPKRPVQMLF*ECCQFF
Trigger: GAAAAACTGGCAACATTCCAAGAATAGCATCTGTAC...CGGCCTTTTGGGGGTGGGTCTGGCCGTACTTGTGATTTCGATGGTACGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp GGAGACCCTGCTTATAGCCCCCAACAGGAAATCCTCATCTGCAGTTaGCAGACAGCCAGAATATTTCCACCTGGGGCATATTTAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GDPAYSPQQEILICS*QTARIFPPGAYLER
Trigger: TCTCTCTAAATATGCCCCAGGTGGAAATATTCTGGCTGTCTGGCAACTGCAGATGAGGATTTCCTGTTGGGGGCTATAAGCAGGGTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465912.1
ENST00000481091.1
CDS-3UTR CAA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCCAACCTGCAGGTGTTaGGAGCCTTTCCTCTACCCC +
Preference number: 5 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLPTCRC*EPFLYP
Trigger: GGGGTAGAGGAAAGGCTCCAAACACCTGCAGGTTGG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTCCTCCTCCTGGTCATaGAGCAGCTTGGCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARASSSWS*SSLAKK
Trigger: CTTCTTGGCCAAGCTGCTCAATGACCAGGAGGAGGA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTCAGGGCTGCAGACATaGTCTCCACAGCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQSGLQT*SPQPQA
Trigger: AGCCTGTGGCTGTGGAGACAATGTCTGCAGCCCTGA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGGCAAAGGCAGGAGAATaGCCTGAAGCCAGGACTTCA +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGAKAGE*PEARTS
Trigger: TGAAGTCCTGGCTTCAGGCAATTCTCCTGCCTTTGC...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp TACTGTCCCTGGCCTTGGAACAAGATAGAAATTAAGACAATCTGGGCTGGGTGCACATACAGTACAACGTaGACGGAAAGTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: YCPWPWNKIEIKTIWAGCTYSTT*TESAGP
Trigger: GGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGT...GCACCCAGCCCAGATTGTCTTAATTTCTATCTTGTTCCAAGGCCAGGGACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 90 bp TACTACGGAGACCCTGCTTATAGCCCCCAACAGGAAATCCTCATCTaGAGTTGCCAGACAGCCAGAATATTTCCACCTGGGGCATATTTA +
Preference number: 5 (lower is better)
Translates to: YYGDPAYSPQQEILI*SCQTARIFPPGAYL
Trigger: TAAATATGCCCCAGGTGGAAATATTCTGGCTGTCTGGCAACTGCAGATGAGGATTTCCTGTTGGGGGCTATAAGCAGGGTCTCCGTAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465912.1
ENST00000481091.1
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTGCACACCCGGGTCTTaGCTTTCCCCCTTTTTCGCT +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQCTPGS*LSPFFA
Trigger: AGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGCA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATCTCTTCACTCGATTGTaGGTGGTGAACATAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHLFTRL*VVNIGK
Trigger: CTTCCCTATGTTCACCACCAACAATCGAGTGAAGAG...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCTCCTCTTCACTCGATaGTTGGTGGTGAACATAGGG +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGLLFTR*LVVNIG
Trigger: CCCTATGTTCACCACCAACAATCGAGTGAAGAGGAG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTCGAAATGGGCAGCTATaGGGTACCTATAAATATGGA +
Preference number: 5 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPRNGQL*GTYKYG
Trigger: TCCATATTTATAGGTACCCAATAGCTGCCCATTTCG...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCTCAGGGCTGCAGACATaGTCTCCACAGCCACAGGCT +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVSGLQT*SPQPQA
Trigger: AGCCTGTGGCTGTGGAGACAATGTCTGCAGCCCTGA...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGCTCCCAGACGCACCCTaGATGACCAAAAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQLPDAP*MTKSCT
Trigger: TGTGCAGCTTTTGGTCATCAAGGGTGCGTCTGGGAG...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGCTGGGGAGCCTGAAATaGAATGGAGAGCCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQLGSLK*NGEPEC
Trigger: GCACTCAGGCTCTCCATTCAATTTCAGGCTCCCCAG...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGCACACACCCACAGTGTaGGCCTCTGGGCTGTACAAA +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQHTPTV*ASGLYK
Trigger: TTTGTACAGCCCAGAGGCCAACACTGTGGGTGTGTG...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGAGGTGTCTACGCGGTaGCCTCCTCAGCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPEVSTR*PPQPGL
Trigger: GAGACCTGGCTGAGGAGGCAACCGCGTAGACACCTC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCTCCTCTTCACTCGATaGTTGGTGGTGAACATAGGG +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARALLFTR*LVVNIG
Trigger: CCCTATGTTCACCACCAACAATCGAGTGAAGAGGAG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCGGAGAAAGCAGAACTTaGATCCCCAGGGCAAGAAGT +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARAGESRT*IPRARS
Trigger: ACTTCTTGCCCTGGGGATCAAAGTTCTGCTTTCTCC...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATAACCCCACTGCAGGATaGAGATTGAGGGAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHNPTAG*RLREKK
Trigger: TTTCTTTTCCCTCAATCTCAATCCTGCAGTGGGGTT...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGGGCCTGGTCTCTGATTGGATTTCCCATACCCTAGAAGTGAGGCTGGATCCTGTACAGATGCTATTCTaGGAATGTTGCCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: QGLVSDWISHTLEVRLDPVQMLF*ECCQFF
Trigger: GAAAAACTGGCAACATTCCAAGAATAGCATCTGTAC...AGGATCCAGCCTCACTTCTAGGGTATGGGAAATCCAATCAGAGACCAGGCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGACATACAGTACAACGTaGACGGAAAGTGCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQTYSTT*TESAGP
Trigger: GGGCCCAGCACTTTCCGTCAACGTTGTACTGTATGT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCAAAGACCTAAAGACTaGCCCTTTCCTACCAGGCTT +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARAQRPKD*PFPTRL
Trigger: AAGCCTGGTAGGAAAGGGCAAGTCTTTAGGTCTTTG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCAGCTTGGCCAAGAAGTaGATATACTTCATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GVEAHMPKISLAPYHSTISLAKK*IYFMAR
Trigger: CCTGGCCATGAAGTATATCAACTTCTTGGCCAAGCT...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCTGGTCATTGAGCAGCTaGGCCAAGAAGTTGATATAC +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARAWSLSS*AKKLIY
Trigger: GTATATCAACTTCTTGGCCAAGCTGCTCAATGACCA...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAAGAGGGAAGACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATAAAGTACCTACCACTTaGCTCCATTTTTCTGATCTC +
Preference number: 5 (lower is better)
Translates to: GRGKTVPSSQKVPTTLLHKVPTT*LHFSDL
Trigger: GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTT...ATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGTCTTCCCTCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGATCACTCTACTATCATaGTCCCTTTCTCTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGITLLS*SLSLPS
Trigger: TGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGAT...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCGGACTTCTGTGCAATTaGTCCCATGGGCTTAGATGC +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVGLLCN*SHGLRC
Trigger: GCATCTAAGCCCATGGGACAAATTGCACAGAAGTCC...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAGAGACCAACGCAATTCATCACATACAGTACAACGTTGACGGAAAGTGCTGGGCCTACCAGGCTTGTTTaGGGTAGTTGCATTACATTT +
Preference number: 5 (lower is better)
Translates to: QRPTQFITYSTTLTESAGPTRLV*GSCITF
Trigger: AAATGTAATGCAACTACCCAAAACAAGCCTGGTAGG...CCCAGCACTTTCCGTCAACGTTGTACTGTATGTGATGAATTGCGTTGGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCCCTTTCCTACCAGGCTaGTTTTGGGTAGTTGCATTA +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARAPFLPG*FWVVAL
Trigger: TAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGG...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCCTCTTCACTCGATTGTaGGTGGTGAACATAGGGAAG +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVLFTRL*VVNIGK
Trigger: CTTCCCTATGTTCACCACCAACAATCGAGTGAAGAG...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCCTGGGGAGCCTGAAATaGAATGGAGAGCCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPLGSLK*NGEPEC
Trigger: GCACTCAGGCTCTCCATTCAATTTCAGGCTCCCCAG...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGAACCCCACTGCAGGATaGAGATTGAGGGAAAAGAAA +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQNPTAG*RLREKK
Trigger: TTTCTTTTCCCTCAATCTCAATCCTGCAGTGGGGTT...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCCTTTCCTACCAGGCTaGTTTTGGGTAGTTGCATTA +
Preference number: 5 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIPFLPG*FWVVAL
Trigger: TAATGCAACTACCCAAAACAAGCCTGGTAGGAAAGG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGAGTTGAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCCGAAATGGGCAGCTATaGGGTACCTATAAATATGGA +
Preference number: 5 (lower is better)
Translates to: GVEAHMPKISLAPYHSTIRNGQL*GTYKYG
Trigger: TCCATATTTATAGGTACCCAATAGCTGCCCATTTCG...GATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTCAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCATCACTCTACTATCATaGTCCCTTTCTCTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLITLLS*SLSLPS
Trigger: TGAAGGCAGAGAAAGGGACAATGATAGTAGAGTGAT...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp ACCGTGCCGTCTTCACAAAAAGTACCTACCACTTTGCTCCATTTTTCTGATCTCCCTACCAGGCTTGTTTaGGGTAGTTGCATTACATTT +
Preference number: 5 (lower is better)
Translates to: TVPSSQKVPTTLLHFSDLPTRLV*GSCITF
Trigger: AAATGTAATGCAACTACCCAAAACAAGCCTGGTAGG...GAGATCAGAAAAATGGAGCAAAGTGGTAGGTACTTTTTGTGAAGACGGCACGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CAAATGCAAAGCATTCATAGGACAGGTTTTGTGCTCAATTCGGAACATAGACCATGGTCATTGAGCAGCTaGGCCAAGAAGTTGATATAC +
Preference number: 5 (lower is better)
Translates to: QMQSIHRTGFVLNSEHRPWSLSS*AKKLIY
Trigger: GTATATCAACTTCTTGGCCAAGCTGCTCAATGACCA...TGGTCTATGTTCCGAATTGAGCACAAAACCTGTCCTATGAATGCTTTGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp CCACTTTGCTCCATTTTTCTGATCTCCTACTGGTACAGGAAACAGAAAAGCCAGTTCATAGGACAGGTTTaGTGCTCAATTCGGAACATA +
Preference number: 5 (lower is better)
Translates to: PLCSIFLISYWYRKQKSQFIGQV*CSIRNI
Trigger: TATGTTCCGAATTGAGCACAAAACCTGTCCTATGAA...CTGGCTTTTCTGTTTCCTGTACCAGTAGGAGATCAGAAAAATGGAGCAAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGGACTTCTGTGCAATTaGTCCCATGGGCTTAGATGC +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPGLLCN*SHGLRC
Trigger: GCATCTAAGCCCATGGGACAAATTGCACAGAAGTCC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GTGTTTAAGGTTCTGCTAAGTGAATGTGCATATGTTTGGGTCTTAGCCAGGGCCAAAGGTTGTACCATCTaGTCATCTGCCATAACAAAT +
Preference number: 5 (lower is better)
Translates to: VFKVLLSECAYVWVLARAKGCTI*SSAITN
Trigger: ATTTGTTATGGCAGATGACAAGATGGTACAACCTTT...GGCCCTGGCTAAGACCCAAACATATGCACATTCACTTAGCAGAACCTTAAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCGGTCTGGTTCAGTGTTaGTTTTCTAAGCAGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPGLVQC*FSKQGG
Trigger: ACCTCCCTGCTTAGAAAACAAACACTGAACCAGACC...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS-3UTR CAA 90 bp GAAGCCCACATGCCCAAAATATCTCTTGCTCCATATCACTCTACTATCATTGTCTATGTTCTTTCCCCTTaGTACAGATGCTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: EAHMPKISLAPYHSTIIVYVLSP*YRCYSW
Trigger: CCAAGAATAGCATCTGTACAAAGGGGAAAGAACATA...GACAATGATAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCATGTGGGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp AAAATATGTGATCCATCTCATAAAACCCATCCACCCATCCATACTGTGGCTACTTGCCCAAAATATCTCTaGCTCCATATCACTCTACTA +
Preference number: 5 (lower is better)
Translates to: KICDPSHKTHPPIHTVATCPKYL*LHITLL
Trigger: TAGTAGAGTGATATGGAGCAAGAGATATTTTGGGCA...AGTAGCCACAGTATGGATGGGTGGATGGGTTTTATGAGATGGATCACATATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCTATGTTCTTTCCCCTTaGTACAGATGCTATTCTTGG +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPYVLSP*YRCYSW
Trigger: CCAAGAATAGCATCTGTACAAAGGGGAAAGAACATA...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS-3UTR CAA 90 bp GGGAGCCAGAAGTTTGAGTTCTTAATAAAATATGTGATCCATCTCATAAAACCCAAAGGTTGTACCATCTaGTCATCTGCCATAACAAAT +
Preference number: 5 (lower is better)
Translates to: GSQKFEFLIKYVIHLIKPKGCTI*SSAITN
Trigger: ATTTGTTATGGCAGATGACAAGATGGTACAACCTTT...GGGTTTTATGAGATGGATCACATATTTTATTAAGAACTCAAACTTCTGGCTCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS CCA 72 bp GCCATGCTGGCCTCGGCCGCGTCCCGTCCCTCTAGCTaGGGGTCACTGCGAGCCGCCTCGCTCGGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: AMLASAASRPSS*GSLRAASLGGR
Trigger: GCGGCCGCCGAGCGAGGCGGCTCGCAGTGACCCCCAGCTAGAGGGACGGGACGCGGCCGAGGCCAGCATGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 72 bp CCTCGGCCGCGTCCCGTCCCTCTAGCTGGGGGTCACTaGGAGCCGCCTCGCTCGGCGGCCGCTCGGTCATCC +
Preference number: 6 (lower is better)
Translates to: PRPRPVPLAGGH*EPPRSAAARSS
Trigger: GGATGACCGAGCGGCCGCCGAGCGAGGCGGCTCGCAGTGACCCCCAGCTAGAGGGACGGGACGCGGCCGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS CCA 72 bp GGGCCGGCTCCATCGGCGGCAGGCAGCATGGCAGGATaGAGGCTGCGGGCCGTGTGCTTGGGCGCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: GPAPSAAGSMAG*RLRAVCLGAGS
Trigger: GGAGCCCGCGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCGATGGAGCCGGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS TCA 72 bp CAAAGAACCCGCTGCCGAGAGAGGCCAGCGGCTGGCTaGGGCTGTAGAGCAGCGCGCGGCCGGGGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: QRTRCRERPAAG*GCRAARGRGRR
Trigger: CCGCCGCCCCCGGCCGCGCGCTGCTCTACAGCCTCAGCCAGCCGCTGGCCTCTCTCGGCAGCGGGTTCTTTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS GCA 72 bp TCCGCGCGCGCCCAGTTCGATGACTGGGGGCTCCGCTaGGGCCGCGCGGCTCGTCTCCTTGGCGACGCCGTT +
Preference number: 6 (lower is better)
Translates to: SARAQFDDWGLR*GRAARLLGDAV
Trigger: AACGGCGTCGCCAAGGAGACGAGCCGCGCGGCCGCAGCGGAGCCCCCAGTCATCGAACTGGGCGCGCGCGGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000371884.6
CDS CCA 72 bp ATCACCGAGGGCCGGCTCCATCGGCGGCAGGCAGCATaGCAGGATGGAGGCTGCGGGCCGTGTGCTTGGGCG +
Preference number: 6 (lower is better)
Translates to: ITEGRLHRRQAA*QDGGCGPCAWA
Trigger: CGCCCAAGCACACGGCCCGCAGCCTCCATCCTGCCATGCTGCCTGCCGCCGATGGAGCCGGCCCTCGGTGAT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS GCA 72 bp AGCTACCGGCTCGAAGGCGCCGGCCTCGGCGAGCGCTaGTCAGCTTCAAGCCTGGAGGAGCCTCCCACTCAC +
Preference number: 6 (lower is better)
Translates to: SYRLEGAGLGER*SASSLEEPPTH
Trigger: GTGAGTGGGAGGCTCCTCCAGGCTTGAAGCTGAGCAGCGCTCGCCGAGGCCGGCGCCTTCGAGCCGGTAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481091.1
CDS CCA 72 bp TGGCTGCCCCATCCAGGGAGCTGCCGCAGCTGGAGTTaGGGGAAAGCACGTCTTGCAGGAGGTCATCTGGGG +
Preference number: 6 (lower is better)
Translates to: WLPHPGSCRSWS*GKARLAGGHLG
Trigger: CCCCAGATGACCTCCTGCAAGACGTGCTTTCCCCCAACTCCAGCTGCGGCAGCTCCCTGGATGGGGCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS CCA 72 bp GAAGCCCACCATCCCAGCAGCCTAAGAACGCCCTCCTaGCTGATCCTGGTGGCCCAGACCCATCACCGAGGG +
Preference number: 6 (lower is better)
Translates to: EAHHPSSLRTPS*LILVAQTHHRG
Trigger: CCCTCGGTGATGGGTCTGGGCCACCAGGATCAGCCAGGAGGGCGTTCTTAGGCTGCTGGGATGGTGGGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000459729.1
CDS GCA 72 bp GTGGTCCTGGGCGATCAGAAATGGATGAAGCCGGAGTaGAGCGGGAACCGAAGCCCGCAGCTACCGGCTCGA +
Preference number: 6 (lower is better)
Translates to: VVLGDQKWMKPE*SGNRSPQLPAR
Trigger: TCGAGCCGGTAGCTGCGGGCTTCGGTTCCCGCTGCACTCCGGCTTCATCCATTTCTGATCGCCCAGGACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481091.1
CDS GCA 72 bp GCCTGCAGTTACGCTGCGGTGTGGTCCTGGGCGATCTaGCGCGCCCAAAGCGAGTTTCCAGGAAAGATAGGG +
Preference number: 6 (lower is better)
Translates to: ACSYAAVWSWAI*RAQSEFPGKIG
Trigger: CCCTATCTTTCCTGGAAACTCGCTTTGGGCGCGGCAGATCGCCCAGGACCACACCGCAGCGTAACTGCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000465912.1
CDS GCA 72 bp TTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGATCTGCCGCGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: FPPFSLRGLQLR*GVVLGDLPRPK
Trigger: CTTTGGGCGCGGCAGATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000294339.3
ENST00000465912.1
CDS CAA 90 bp GTCTGGTTCAGTGTTTGTTTTCTAAGCAGGGAGGTGTCTACGCGGTaGCCTCCTCAGCCAGGTCTCCGGCTGCCGCTACACCGCGAAGGG +
Preference number: 6 (lower is better)
Translates to: VWFSVCFLSREVSTR*PPQPGLRLPLHREG
Trigger: CCCTTCGCGGTGTAGCGGCAGCCGGAGACCTGGCTGAGGAGGCAACCGCGTAGACACCTCCCTGCTTAGAAAACAAACACTGAACCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS GCA 72 bp GTCCAGGGAATCGCAAACAGCTTTCCGCCCCCAACCTaGAGGTGTTTGGAGCCTTTCCTCTACCCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: VQGIANSFPPPT*RCLEPFLYPLL
Trigger: GAGGAGGGGGTAGAGGAAAGGCTCCAAACACCTGCAGGTTGGGGGCGGAAAGCTGTTTGCGATTCCCTGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS CAA 72 bp GGCGGAAGCCGAGGAAGAGGATGCACACCCGGGTCTTaGCTTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: GGSRGRGCTPGS*LSPFFAERPAV
Trigger: AACTGCAGGCCTCTCAGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGCATCCTCTTCCTCGGCTTCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000464796.5
ENST00000465912.1
ENST00000481091.1
CDS GCA 72 bp GCGGAAGCCGAGGAAGAGGATGCACACCCGGGTCTTTaGTTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTA +
Preference number: 6 (lower is better)
Translates to: AEAEEEDAHPGL*FPPFSLRGLQL
Trigger: TAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAAGCAAAGACCCGGGTGTGCATCCTCTTCCTCGGCTTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000294339.3
ENST00000371884.6
ENST00000464796.5
ENST00000465912.1
ENST00000481091.1
CDS CAA 72 bp AGTGTTTGTTTTCTAAGCAGGGAGGTGTCTACGCGGTaGCCTCCTCAGCCAGGTCTCCGGCTGCCGCTACAC +
Preference number: 6 (lower is better)
Translates to: SVCFLSREVSTR*PPQPGLRLPLH
Trigger: GTGTAGCGGCAGCCGGAGACCTGGCTGAGGAGGCAACCGCGTAGACACCTCCCTGCTTAGAAAACAAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS GCA 72 bp TTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGATAGAATCAGATCCCTG +
Preference number: 6 (lower is better)
Translates to: FPPFSLRGLQLR*GVVLGDRIRSL
Trigger: CAGGGATCTGATTCTATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371884.6
CDS CCA 72 bp CAGGGAGGAAGCAGACTCCAGACTCTAAGGAAGACTTaGGAGGAAGTGCAGGGAATCCCTGAGGGTCAGTGC +
Preference number: 6 (lower is better)
Translates to: QGGSRLQTLRKT*EEVQGIPEGQC
Trigger: GCACTGACCCTCAGGGATTCCCTGCACTTCCTCCCAAGTCTTCCTTAGAGTCTGGAGTCTGCTTCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459729.1
CDS GCA 72 bp TTTCCCCCTTTTTCGCTGAGAGGCCTGCAGTTACGCTaGGGTGTGGTCCTGGGCGATCAGAAATGGATGAAG +
Preference number: 6 (lower is better)
Translates to: FPPFSLRGLQLR*GVVLGDQKWMK
Trigger: CTTCATCCATTTCTGATCGCCCAGGACCACACCGCAGCGTAACTGCAGGCCTCTCAGCGAAAAAGGGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481091.1
CDS CCA 72 bp TCCAACAGCAACAACAACCCCTCCCGACAGGCTGTCTaGAACATTTTCGAACCCTCCAACTGGGATCGGTCT +
Preference number: 6 (lower is better)
Translates to: SNSNNNPSRQAV*NIFEPSNWDRS
Trigger: AGACCGATCCCAGTTGGAGGGTTCGAAAATGTTCCAGACAGCCTGTCGGGAGGGGTTGTTGTTGCTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS CAA 72 bp TCGAACCCTCCAACTGGGATCGGTCTGGTTCAGTGTTaGTTTTCTAAGCAGGGAGGTGTCTACGCGGTTGCC +
Preference number: 6 (lower is better)
Translates to: SNPPTGIGLVQC*FSKQGGVYAVA
Trigger: GGCAACCGCGTAGACACCTCCCTGCTTAGAAAACAAACACTGAACCAGACCGATCCCAGTTGGAGGGTTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS CAA 90 bp GGAACATTTTCGAACCCTCCAACTGGGATCGGTCTGGTTCAGTGTTaGTTTTCTAAGCAGGGAGGTGTCTACGCGGTTGCCTCCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GTFSNPPTGIGLVQC*FSKQGGVYAVASSA
Trigger: GGCTGAGGAGGCAACCGCGTAGACACCTCCCTGCTTAGAAAACAAACACTGAACCAGACCGATCCCAGTTGGAGGGTTCGAAAATGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294339.3
CDS GCA 72 bp GACCCTGCTTATAGCCCCCAACAGGAAATCCTCATCTaGAGTTGCCAGACAGCCAGAATATTTCCACCTGGG +
Preference number: 6 (lower is better)
Translates to: DPAYSPQQEILI*SCQTARIFPPG
Trigger: CCCAGGTGGAAATATTCTGGCTGTCTGGCAACTGCAGATGAGGATTTCCTGTTGGGGGCTATAAGCAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465912.1
ENST00000481091.1
CDS GCA 72 bp GCTTATAGCCCCCAACAGGAAATCCTCATCTGCAGTTaGCAGACAGCCAGAATATTTCCACCTGGGGCATAT +
Preference number: 6 (lower is better)
Translates to: AYSPQQEILICS*QTARIFPPGAY
Trigger: ATATGCCCCAGGTGGAAATATTCTGGCTGTCTGGCAACTGCAGATGAGGATTTCCTGTTGGGGGCTATAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465912.1
ENST00000481091.1
CDS CAA 72 bp GTTCTAGAGTATTTGACGACTACAGCTCCTCTCTCTTaGTACTACGGAGACCCTGCTTATAGCCCCCAACAG +
Preference number: 6 (lower is better)
Translates to: VLEYLTTTAPLS*YYGDPAYSPQQ
Trigger: CTGTTGGGGGCTATAAGCAGGGTCTCCGTAGTACAAAGAGAGAGGAGCTGTAGTCGTCAAATACTCTAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465912.1
ENST00000481091.1