Pregenerated sensors for TAGLN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000158710Ensembl transcript IDs: ENST00000368096.5, ENST00000478033.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGTGGTTAGAGGAGATCACAGGCTGCCCTAGTAAATCCCTTCCTTaGACAGAGCACAGGCTTTGCTGTTGGCTCAAGGGCTGGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: WWLEEITGCPSKSLP*TEHRLCCWLKGWCQ Trigger: CTGGCACCAGCCCTTGAGCCAACAGCAAAGCCTGTGCTCTGTCCAAGGAAGGGATTTACTAGGGCAGCCTGTGATCTCCTCTAACCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS GCA 90 bp | TTCCTAGGGACAGGATTGGGCAGAAACAATGCACCTGCTGGACCCTaGGGCTGTCCCAGCAATACTTACTTAGGGAACCAGTTGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: FLGTGLGRNNAPAGP*GCPSNTYLGNQLGS Trigger: GGATCCCAACTGGTTCCCTAAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 90 bp | GTGGGGGCAGGGAGGACTTCAGGGTTCTTGGCTAGGGTGTTTAATTaGGAAGACAAAGGGACTCTCCATCCACCGTGCAGATGGAACACA | + |
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Preference number: 5 (lower is better) Translates to: VGAGRTSGFLARVFN*EDKGTLHPPCRWNT Trigger: TGTGTTCCATCTGCACGGTGGATGGAGAGTCCCTTTGTCTTCCCAATTAAACACCCTAGCCAAGAACCCTGAAGTCCTCCCTGCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS GCA 90 bp | GCTAGGGTGTTTAATTGGGAAGACAAAGGGACTCTCCATCCACCGTaGAGATGGAACACAGGAGAACTTCCCAACTCAGATTTGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: ARVFNWEDKGTLHPP*RWNTGELPNSDLGQ Trigger: CTGTCCCAAATCTGAGTTGGGAAGTTCTCCTGTGTTCCATCTGCACGGTGGATGGAGAGTCCCTTTGTCTTCCCAATTAAACACCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS GCA 90 bp | GATAAGTTATTTCCTAGGGACAGGATTGGGCAGAAACAATGCACCTaGTGGACCCTGCGGCTGTCCCAGCAATACTTACTTAGGGAACCA | + |
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Preference number: 5 (lower is better) Translates to: DKLFPRDRIGQKQCT*WTLRLSQQYLLREP Trigger: TGGTTCCCTAAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAAATAACTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 90 bp | GTGTTTAATTGGGAAGACAAAGGGACTCTCCATCCACCGTGCAGATaGAACACAGGAGAACTTCCCAACTCAGATTTGGGACAGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: VFNWEDKGTLHPPCR*NTGELPNSDLGQGV Trigger: CACTCCCTGTCCCAAATCTGAGTTGGGAAGTTCTCCTGTGTTCCATCTGCACGGTGGATGGAGAGTCCCTTTGTCTTCCCAATTAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS CCA 90 bp | AAGTTATTTCCTAGGGACAGGATTGGGCAGAAACAATGCACCTGCTaGACCCTGCGGCTGTCCCAGCAATACTTACTTAGGGAACCAGTT | + |
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Preference number: 5 (lower is better) Translates to: KLFPRDRIGQKQCTC*TLRLSQQYLLREPV Trigger: AACTGGTTCCCTAAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAAATAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS TCA 90 bp | TCATCTGTCCAAAGGGACAGTCATTTGCCATCCCAGAGGGTGTTGTaGGGATTAAGTGAGATGAGGAATTTTCTGAAAGTGCTTTGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSVQRDSHLPSQRVL*GLSEMRNFLKVLCK Trigger: TTTACAAAGCACTTTCAGAAAATTCCTCATCTCACTTAATCCTCACAACACCCTCTGGGATGGCAAATGACTGTCCCTTTGGACAGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS TCA 72 bp | ATTTGGGACAGGGAGTGTTCTCAAAGAGCAGCACAGTaGGGGCACCAGCCCACAGAGCGAGGTGCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: IWDRECSQRAAQ*GHQPTERGATA Trigger: GGCTGTGGCACCTCGCTCTGTGGGCTGGTGCCCTCACTGTGCTGCTCTTTGAGAACACTCCCTGTCCCAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS CCA 72 bp | AAATCCCTTCCTTGGACAGAGCACAGGCTTTGCTGTTaGCTCAAGGGCTGGTGCCAGCTCTGCCCTCGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KSLPWTEHRLCC*LKGWCQLCPRE Trigger: CTCTCGAGGGCAGAGCTGGCACCAGCCCTTGAGCCAACAGCAAAGCCTGTGCTCTGTCCAAGGAAGGGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS GCA 72 bp | CCTAGTAAATCCCTTCCTTGGACAGAGCACAGGCTTTaGTGTTGGCTCAAGGGCTGGTGCCAGCTCTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PSKSLPWTEHRL*CWLKGWCQLCP Trigger: AGGGCAGAGCTGGCACCAGCCCTTGAGCCAACAGCAAAGCCTGTGCTCTGTCCAAGGAAGGGATTTACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 72 bp | CCTAGGGACAGGATTGGGCAGAAACAATGCACCTGCTaGACCCTGCGGCTGTCCCAGCAATACTTACTTAGG | + |
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Preference number: 6 (lower is better) Translates to: PRDRIGQKQCTC*TLRLSQQYLLR Trigger: CCTAAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 72 bp | GAGGAGATCACAGGCTGCCCTAGTAAATCCCTTCCTTaGACAGAGCACAGGCTTTGCTGTTGGCTCAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: EEITGCPSKSLP*TEHRLCCWLKG Trigger: GCCCTTGAGCCAACAGCAAAGCCTGTGCTCTGTCCAAGGAAGGGATTTACTAGGGCAGCCTGTGATCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CAA 72 bp | CGGACATGGGTGGGGGCAGGGAGGACTTCAGGGTTCTaGGCTAGGGTGTTTAATTGGGAAGACAAAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: RTWVGAGRTSGF*ARVFNWEDKGT Trigger: AGTCCCTTTGTCTTCCCAATTAAACACCCTAGCCAAGAACCCTGAAGTCCTCCCTGCCCCCACCCATGTCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS CAA 90 bp | AAAGGGCCAGCTGCTACTGAGATAAGTTATTTCCTAGGGACAGGATaGGGCAGAAACAATGCACCTGCTGGACCCTGCGGCTGTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: KGPAATEISYFLGTG*GRNNAPAGPCGCPS Trigger: GCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAAATAACTTATCTCAGTAGCAGCTGGCCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS GCA 72 bp | ACAGGATTGGGCAGAAACAATGCACCTGCTGGACCCTaGGGCTGTCCCAGCAATACTTACTTAGGGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: TGLGRNNAPAGP*GCPSNTYLGNQ Trigger: CTGGTTCCCTAAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS GCA 72 bp | TTTCCTAGGGACAGGATTGGGCAGAAACAATGCACCTaGTGGACCCTGCGGCTGTCCCAGCAATACTTACTT | + |
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Preference number: 6 (lower is better) Translates to: FPRDRIGQKQCT*WTLRLSQQYLL Trigger: AAGTAAGTATTGCTGGGACAGCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 72 bp | GGGAGGACTTCAGGGTTCTTGGCTAGGGTGTTTAATTaGGAAGACAAAGGGACTCTCCATCCACCGTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GRTSGFLARVFN*EDKGTLHPPCR Trigger: TCTGCACGGTGGATGGAGAGTCCCTTTGTCTTCCCAATTAAACACCCTAGCCAAGAACCCTGAAGTCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS CAA 72 bp | GCTGCTACTGAGATAAGTTATTTCCTAGGGACAGGATaGGGCAGAAACAATGCACCTGCTGGACCCTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AATEISYFLGTG*GRNNAPAGPCG Trigger: GCCGCAGGGTCCAGCAGGTGCATTGTTTCTGCCCAATCCTGTCCCTAGGAAATAACTTATCTCAGTAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 72 bp | GATTCTCCTTGGATTTCCTGGGTGACAAGGGAGTGGTaGTTAGAGGAGATCACAGGCTGCCCTAGTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: DSPWISWVTREW*LEEITGCPSKS Trigger: GGATTTACTAGGGCAGCCTGTGATCTCCTCTAACCACCACTCCCTTGTCACCCAGGAAATCCAAGGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS CCA 72 bp | GAGGATTCTCCTTGGATTTCCTGGGTGACAAGGGAGTaGTGGTTAGAGGAGATCACAGGCTGCCCTAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: EDSPWISWVTRE*WLEEITGCPSK Trigger: TTTACTAGGGCAGCCTGTGATCTCCTCTAACCACCACTCCCTTGTCACCCAGGAAATCCAAGGAGAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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| CDS GCA 72 bp | TTTAATTGGGAAGACAAAGGGACTCTCCATCCACCGTaGAGATGGAACACAGGAGAACTTCCCAACTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: FNWEDKGTLHPP*RWNTGELPNSD Trigger: ATCTGAGTTGGGAAGTTCTCCTGTGTTCCATCTGCACGGTGGATGGAGAGTCCCTTTGTCTTCCCAATTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368096.5 |
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| CDS TCA 72 bp | CAAAGGGACAGTCATTTGCCATCCCAGAGGGTGTTGTaGGGATTAAGTGAGATGAGGAATTTTCTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: QRDSHLPSQRVL*GLSEMRNFLKV Trigger: CACTTTCAGAAAATTCCTCATCTCACTTAATCCTCACAACACCCTCTGGGATGGCAAATGACTGTCCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000478033.1 |
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