RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAFA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000219438

Ensembl transcript IDs: ENST00000336769.9, ENST00000358295.9, ENST00000402357.6, ENST00000406880.1, ENST00000473898.1

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTTCCCGGCGTCTGCGTGGGGGCCGTCGCTGCCTCCCGCAGGTGTaGCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGAGGGTGCGC +
Preference number: 1 (lower is better)
Translates to: RSRRLRGGRRCLPQV*HGLRAAEARPPRVR
Trigger: GCGCACCCTCGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAACG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 90 bp AGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGAGGGTaGGCGGGGTGCTCCTGGGGTGGAGGCCTCCACCACGGCCGCCCT +
Preference number: 1 (lower is better)
Translates to: RCATASAQPKPVLRG*AGCSWGGGLHHGRP
Trigger: AGGGCGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCACCCTCGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 90 bp ACCACGGCCGCCCTCTCCGCTCCGCCGGGGCCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCT +
Preference number: 1 (lower is better)
Translates to: TTAALSAPPGPPACL*HHCPPARTSDPRDP
Trigger: AGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGGCCCCGGCGGAGCGGAGAGGGCGGCCGTGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 90 bp GCCCTCTCCGCTCCGCCGGGGCCACCAGCATGTCTCTGCCACCATTaGCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAG +
Preference number: 1 (lower is better)
Translates to: ALSAPPGPPACLCHH*PPARTSDPRDPDSE
Trigger: CTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGGCCCCGGCGGAGCGGAGAGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 90 bp TCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCTaGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGG +
Preference number: 1 (lower is better)
Translates to: SSSEDSRANATVGGG*ARPGSHRLRIADAR
Trigger: CCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCAGCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 90 bp GCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCCGGGG +
Preference number: 1 (lower is better)
Translates to: AGGRERVKSEASGEL*LRRGLSREPRPLPG
Trigger: CCCCGGGAGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 90 bp TCTAAGTACAGAGGAATAAAGCGGCCTGCGTTCCCGGCGTCTGCGTaGGGGCCGTCGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGC +
Preference number: 1 (lower is better)
Translates to: SKYRGIKRPAFPASA*GPSLPPAGVPRPPR
Trigger: GCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAACGCAGGCCGCTTTATTCCTCTGTACTTAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR TCA 90 bp CTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCG +
Preference number: 1 (lower is better)
Translates to: LLGSAGQTEAQDAKA*GRPSRTTGKRSGRA
Trigger: CGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR TCA 90 bp GGTGTCTACACTTGCTTTCAAAAGAAACAGGCGAGGGGGAGGCCGTaGGGACGCTGGCTGGCAGAGGCTGCCGGCCCGGGCCGCCGGAGC +
Preference number: 1 (lower is better)
Translates to: GVYTCFQKKQARGRP*GRWLAEAAGPGRRS
Trigger: GCTCCGGCGGCCCGGGCCGGCAGCCTCTGCCAGCCAGCGTCCTCACGGCCTCCCCCTCGCCTGTTTCTTTTGAAAGCAAGTGTAGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 90 bp AGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAGGCCACTCCCGGGGCCCCTCAGGGG +
Preference number: 1 (lower is better)
Translates to: RTGEVRGEWRTVAET*ALQGAKATPGAPQG
Trigger: CCCCTGAGGGGCCCCGGGAGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 90 bp AACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCC +
Preference number: 1 (lower is better)
Translates to: NGVGGRQRTGEVRGE*RTVAETWALQGAKA
Trigger: GGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 90 bp TGCCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTaGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAA +
Preference number: 1 (lower is better)
Translates to: CQGLRPSFTDHRETE*AGGRERVKSEASGE
Trigger: TTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR GCA 90 bp GAATTGTCGCTTATTCCTCGGCCCTGCCGGCCCCGCCTGCGCCTCTaGCCGGCGCGACTTTCTGGACCTAGTGACACGAAGACAGAGGAC +
Preference number: 1 (lower is better)
Translates to: ELSLIPRPCRPRLRL*PARLSGPSDTKTED
Trigger: GTCCTCTGTCTTCGTGTCACTAGGTCCAGAAAGTCGCGCCGGGCAGAGGCGCAGGCGGGGCCGGCAGGGCCGAGGAATAAGCGACAATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 90 bp AAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCCGGCCCCGCCTaGGCCTCTGCCCGGCGCGACTTTCTGGACCTAGTGACACGAAGA +
Preference number: 1 (lower is better)
Translates to: KNQNCRLFLGPAGPA*ASARRDFLDLVTRR
Trigger: TCTTCGTGTCACTAGGTCCAGAAAGTCGCGCCGGGCAGAGGCGCAGGCGGGGCCGGCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR TCA 90 bp AACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTaGCCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGGC +
Preference number: 1 (lower is better)
Translates to: NPLEEACSRYCTLKC*PIQGPERESGAKPG
Trigger: GCCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 90 bp TTCAAACAAGTGTTACTCGAGTTTTCTTTGCTTTCTGGAGCTAAATaGGGTATCGATGAGGCAGCAGTCACGGGAGACCCAACATGCTCT +
Preference number: 1 (lower is better)
Translates to: FKQVLLEFSLLSGAK*GIDEAAVTGDPTCS
Trigger: AGAGCATGTTGGGTCTCCCGTGACTGCTGCCTCATCGATACCCCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTAACACTTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 90 bp GTCCGTGAGTGGCGAAAGGGGCAGGAAATGGGAAACAAAACCCATTaGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAA +
Preference number: 1 (lower is better)
Translates to: VREWRKGQEMGNKTH*KKHVQDIVRSSVDQ
Trigger: TTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATTTCCTGCCCCTTTCGCCACTCACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp CCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCCTCTGCCTCCCGCAGGTGTaGCACGGCCTCCGCGCAGCC +
Preference number: 2 (lower is better)
Translates to: PGLPGHDRHIRDADATVLCLPQV*HGLRAA
Trigger: GGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCA...GAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp TCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGTCCCGCCTTCCGTGGGGGCCGTCGCTaGCTCCCGCAGGTGTGCCAC +
Preference number: 2 (lower is better)
Translates to: SGTPTPRSSARFSQSPAFRGGRR*LPQVCH
Trigger: GTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACG...GAAGGCGGGACTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGGTGTCTCAGGCGGGCTaGGCTGCAGCCTTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPVSQAG*AAAFCG
Trigger: GCCACAGAAGGCTGCAGCCCAGCCCGCCTGAGACAC...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR TCA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACC +
Preference number: 2 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGQDAKA*GRPSRT
Trigger: GGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTG...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR TCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGCCGCTTCTGTGCCTaGCAGTCCCCTGGGGCAGGC +
Preference number: 2 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPGRFCA*QSPGAG
Trigger: GCCTGCCCCAGGGGACTGTCAGGCACAGAAGCGGCC...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR GCA 90 bp GTCCTCCGAGGGTGCGCGGGGTGCTCCTGGGGTGGAGGCCTCCACCACGGCCGCCCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCC +
Preference number: 2 (lower is better)
Translates to: VLRGCAGCSWGGGLHHGRPPACL*HHCPPA
Trigger: GGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGG...GCGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCACCCTCGGAGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCCTCCTCGGGTCGGCTaGACAGACCGAAGCTCAGGA +
Preference number: 2 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGPPRVG*TDRSSG
Trigger: TCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGG...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp AATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGAACCCGGCCTCCCCGGGCACGGGCTGCAGCCTTCTGTaGCTGCCGGAGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: NQEPSLARSEGNPASPGTGCSLL*LPELPP
Trigger: AGGAGGCAGCTCCGGCAGCCACAGAAGGCTGCAGCC...CGTGCCCGGGGAGGCCGGGTTCCCCTCGCTGCGGGCCAGGCTTGGCTCCTGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp AATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGAACCCGGCCTCCCCGGGCACGGTGTCTCAGGCGGGCTaGGCTGCAGCCTTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: NQEPSLARSEGNPASPGTVSQAG*AAAFCG
Trigger: GCCACAGAAGGCTGCAGCCCAGCCCGCCTGAGACAC...CGTGCCCGGGGAGGCCGGGTTCCCCTCGCTGCGGGCCAGGCTTGGCTCCTGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR TCA 90 bp GCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGCGGCAGAGAACGGGTaGAGTCCGAGGCGAGTGGAG +
Preference number: 2 (lower is better)
Translates to: ASSSSSSEDSRANATVGGAAENG*SPRRVE
Trigger: CTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGC...CCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR CCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGCTGCAGCCTTCTGTaGCTGCCGGAGCTGCCTCCT +
Preference number: 2 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPGCSLL*LPELPP
Trigger: AGGAGGCAGCTCCGGCAGCCACAGAAGGCTGCAGCC...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR TCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGGTGGAGAACTGTGGCTaGGACGTGGGCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQVENCG*DVGSPG
Trigger: CCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCAC...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR CCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR TCA 90 bp TCTTCAGAAACACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACC +
Preference number: 2 (lower is better)
Translates to: SSETHGARPDSQDGRDCHQDAKA*GRPSRT
Trigger: GGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTG...GTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTGTTTCTGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCACGGGCTCCCACAGACTaGGTATTGCTGATGCCAGGT +
Preference number: 2 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPRAPTD*VLLMPG
Trigger: ACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCG...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR GCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTTCAGGCGGGCTGGGCTaGAGCCTTCTGTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVSGGLG*SLLWLP
Trigger: CGGCAGCCACAGAAGGCTGCAGCCCAGCCCGCCTGA...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp CCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: PRPEAVLHGPQGNGVGGRASGEL*LRRGLS
Trigger: GGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGC...CCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR CCA 90 bp GCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: ASSSSSSEDSRANATVGGEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...CCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR TCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGTGGAGAACTGTGGCTaGGACGTGGGCTCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: TDHRETEWAGGRERVKSEVENCG*DVGSPG
Trigger: CCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCAC...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR GCA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCTCAGGCGGGCTGGGCTaGAGCCTTCTGTGGCTGCCG +
Preference number: 2 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVSGGLG*SLLWLP
Trigger: CGGCAGCCACAGAAGGCTGCAGCCCAGCCCGCCTGA...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR CCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCGTGTCTCAGGCGGGCTaGGCTGCAGCCTTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: QFGQSGAREEAASVPDSPVSQAG*AAAFCG
Trigger: GCCACAGAAGGCTGCAGCCCAGCCCGCCTGAGACAC...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR GCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTTGTCTCTGCCACCATTaGCCTCCCGCCCGCACAAGC +
Preference number: 2 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVCLCHH*PPARTS
Trigger: GCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACA...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCTTTCTGGAGCTAAATaGGGTATCGATGAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGLSGAK*GIDEAA
Trigger: TGCTGCCTCATCGATACCCCATTTAGCTCCAGAAAG...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCCCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCC +
Preference number: 2 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVPPACL*HHCPPA
Trigger: GGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGG...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCCGGGCTCCCACAGACTaGGTATTGCTGATGCCAGGT +
Preference number: 2 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVRAPTD*VLLMPG
Trigger: ACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCG...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR-3UTR CCA 90 bp GCTGGCGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCGCAATTCGGACAGTCTaGGGCACGGGAGGAGGCCGC +
Preference number: 2 (lower is better)
Translates to: AGERRPGEKNQNCRLFLGAIRTV*GTGGGR
Trigger: GCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGC...GCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCGCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp TCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGTCCCGCCTTCGACCCAACATGCTCTTaGCAGATACTGGATTATCCA +
Preference number: 2 (lower is better)
Translates to: SGTPTPRSSARFSQSPAFDPTCS*QILDYP
Trigger: TGGATAATCCAGTATCTGCCAAGAGCATGTTGGGTC...GAAGGCGGGACTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCGACCGAAGCTCAGGATaGCAAGGCCTGAGGCCGTCC +
Preference number: 2 (lower is better)
Translates to: RTTARGEKPELSLIPRPCDRSSG*QGLRPS
Trigger: GGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTC...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR GCA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGGAGTCCCGCCTTCCGTaGCTGGCACCCCGGGGTCCG +
Preference number: 2 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKESRLP*LAPRGP
Trigger: CGGACCCCGGGGTGCCAGGCACGGAAGGCGGGACTC...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR TCA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGCCCCGCCTATGTGTCTaGGTCCGGCCTCCTCGGGTC +
Preference number: 2 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKPRLCV*VRPPRV
Trigger: GACCCGAGGAGGCCGGACTCAGACACATAGGCGGGG...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ATTATGTCCTCATGGATACCGGAACAGGTCTTAAATAAATGGATTTTCTTTCGTTGCGCGGGGTGCTCCTaGGGTGGAGGCCTCCACCAC +
Preference number: 2 (lower is better)
Translates to: IMSSWIPEQVLNKWIFFRCAGCS*GGGLHH
Trigger: GTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCA...ACGAAAGAAAATCCATTTATTTAAGACCTGTTCCGGTATCCATGAGGACATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR TCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCTTAGTACGGTCAAGTTaGTCTAAGTACAGAGGAATA +
Preference number: 2 (lower is better)
Translates to: RTTARGEKPELSLIPRPCLVRSS*SKYRGI
Trigger: TATTCCTCTGTACTTAGATCAACTTGACCGTACTAA...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CAA 90 bp AAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTaGACCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KPIGRSMFKILYAQV*TNTGTREGIRSQAW
Trigger: CCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCC +
Preference number: 2 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWASGEL*LRRGLS
Trigger: GGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGC...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 2 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ATTATGTCCTCATGGATACCGGAACAGGTCTTAAATAAATGGATTTTCTTTCGTACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 2 (lower is better)
Translates to: IMSSWIPEQVLNKWIFFRTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...ACGAAAGAAAATCCATTTATTTAAGACCTGTTCCGGTATCCATGAGGACATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CCA 90 bp ATTATGTCCTCATGGATACCGGAACAGGTCTTAAATAAATGGATTTTCTTTCGTGCTCTTGGCAGATACTaGATTATCCAACTATCAAAA +
Preference number: 2 (lower is better)
Translates to: IMSSWIPEQVLNKWIFFRALGRY*IIQLSK
Trigger: TTTTGATAGTTGGATAATCCAGTATCTGCCAAGAGC...ACGAAAGAAAATCCATTTATTTAAGACCTGTTCCGGTATCCATGAGGACATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 72 bp CGTCTGCGTGGGGGCCGTCGCTGCCTCCCGCAGGTGTaGCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCG +
Preference number: 3 (lower is better)
Translates to: RLRGGRRCLPQV*HGLRAAEARPP
Trigger: CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACGCAGACG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 72 bp GCCCTCTCCGCTCCGCCGGGGCCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCCCGCACAAGCGACCCC +
Preference number: 3 (lower is better)
Translates to: ALSAPPGPPACL*HHCPPARTSDP
Trigger: GGGGTCGCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGGCCCCGGCGGAGCGGAGAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp GAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCTaGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCT +
Preference number: 3 (lower is better)
Translates to: EDSRANATVGGG*ARPGSHRLRIA
Trigger: AGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCAGCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR GCA 72 bp GCTCCGCCGGGGCCACCAGCATGTCTCTGCCACCATTaGCCTCCCGCCCGCACAAGCGACCCCAGGGACCCT +
Preference number: 3 (lower is better)
Translates to: APPGPPACLCHH*PPARTSDPRDP
Trigger: AGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGGCCCCGGCGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp CACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCCTaGGGCAGGCGTCGTGTCTCAGGCGGGCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: HGRRPLLCLTVP*GRRRVSGGLGC
Trigger: GCAGCCCAGCCCGCCTGAGACACGACGCCTGCCCCAGGGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 72 bp AGAGGAATAAAGCGGCCTGCGTTCCCGGCGTCTGCGTaGGGGCCGTCGCTGCCTCCCGCAGGTGTGCCACGG +
Preference number: 3 (lower is better)
Translates to: RGIKRPAFPASA*GPSLPPAGVPR
Trigger: CCGTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAACGCAGGCCGCTTTATTCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CAA 90 bp TCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGTCCCGCCTTCCCCACAGACTGCGTATaGCTGATGCCAGGTGCCGCC +
Preference number: 3 (lower is better)
Translates to: SGTPTPRSSARFSQSPAFPTDCV*LMPGAA
Trigger: GGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGG...GAAGGCGGGACTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 72 bp GTACAGAGGAATAAAGCGGCCTGCGTTCCCGGCGTCTaGGTGGGGGCCGTCGCTGCCTCCCGCAGGTGTGCC +
Preference number: 3 (lower is better)
Translates to: VQRNKAACVPGV*VGAVAASRRCA
Trigger: GGCACACCTGCGGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAACGCAGGCCGCTTTATTCCTCTGTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTaGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCG +
Preference number: 3 (lower is better)
Translates to: LRPSFTDHRETE*AGGRERVKSEA
Trigger: CGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR GCA 72 bp CCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATaGCAAGGCCTGAGGCCGTCCTTCACGGACCACAGG +
Preference number: 3 (lower is better)
Translates to: PPRVGWTDRSSG*QGLRPSFTDHR
Trigger: CCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR GCA 72 bp AATTGTCGCTTATTCCTCGGCCCTGCCGGCCCCGCCTaGGCCTCTGCCCGGCGCGACTTTCTGGACCTAGTG +
Preference number: 3 (lower is better)
Translates to: NCRLFLGPAGPA*ASARRDFLDLV
Trigger: CACTAGGTCCAGAAAGTCGCGCCGGGCAGAGGCGCAGGCGGGGCCGGCAGGGCCGAGGAATAAGCGACAATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp GGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GGRQRTGEVRGE*RTVAETWALQG
Trigger: TCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR TCA 72 bp TCGGCTGGACAGACCGAAGCTCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACCACAGGGAAACGGAGT +
Preference number: 3 (lower is better)
Translates to: SAGQTEAQDAKA*GRPSRTTGKRS
Trigger: ACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTCTGTCCAGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR CCA 72 bp AGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCA +
Preference number: 3 (lower is better)
Translates to: RERVKSEASGEL*LRRGLSREPRP
Trigger: TGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
3UTR TCA 72 bp ATAGGTAGTATATACTTCAGCGGGAACTCAGGAAAATaGAGGAGGCTGGCGAACGACGGCCAGGGGAGAAAA +
Preference number: 3 (lower is better)
Translates to: IGSIYFSGNSGK*RRLANDGQGRK
Trigger: TTTTCTCCCCTGGCCGTCGTTCGCCAGCCTCCTTCATTTTCCTGAGTTCCCGCTGAAGTATATACTACCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp GTGTTACTCGAGTTTTCTTTGCTTTCTGGAGCTAAATaGGGTATCGATGAGGCAGCAGTCACGGGAGACCCA +
Preference number: 3 (lower is better)
Translates to: VLLEFSLLSGAK*GIDEAAVTGDP
Trigger: TGGGTCTCCCGTGACTGCTGCCTCATCGATACCCCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR GCA 72 bp GGTATCGATGAGGCAGCAGTCACGGGAGACCCAACATaGTCTTGGCAGATACTGGATTATCCAACTATCAAA +
Preference number: 3 (lower is better)
Translates to: GIDEAAVTGDPT*SWQILDYPTIK
Trigger: TTTGATAGTTGGATAATCCAGTATCTGCCAAGAGCATGTTGGGTCTCCCGTGACTGCTGCCTCATCGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CCA 72 bp TGGCGAAAGGGGCAGGAAATGGGAAACAAAACCCATTaGAAGAAGCATGTTCAAGATATTGTACGCTCAAGT +
Preference number: 3 (lower is better)
Translates to: WRKGQEMGNKTH*KKHVQDIVRSS
Trigger: ACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATTTCCTGCCCCTTTCGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR-3UTR CAA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTTACTCGAGTTTTCTTaGCTTTCTGGAGCTAAATGG +
Preference number: 3 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKLLEFS*LSGAKW
Trigger: CCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTAA...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGGCGAGGGGGAGGCCGTaGGGACGCTGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPARGRP*GRWLAE
Trigger: CTCTGCCAGCCAGCGTCCTCACGGCCTCCCCCTCGC...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGTGCCTCCCGCAGGTGTaGCACGGCCTCCGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPCLPQV*HGLRAA
Trigger: GGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCA...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCCTCGAGTCCCGCCTTCCGTaGCTGGCACCCCGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: PGLPGHDRHIRDADATVLESRLP*LAPRGP
Trigger: CGGACCCCGGGGTGCCAGGCACGGAAGGCGGGACTC...GAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGAGGGCGGTCGCATCTTaGCGGCTGCCGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPRAVAS*RLPVLG
Trigger: GCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCT...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR GCA 90 bp CCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCCTCTCCCGCCGGGCTGCGTaGACGTCCAGCCTGACCGGT +
Preference number: 4 (lower is better)
Translates to: PGLPGHDRHIRDADATVLSRRAA*TSSLTG
Trigger: ACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGA...GAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTTTCCCGGCGTCTGCGTaGGGGCCGTCGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGFPASA*GPSLPP
Trigger: GGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAA...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GTCCTCCGAGGGTGCGCGGGGTGCTCCTGGGGTGGAGGCCTCCACCACGGCCGCCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: VLRGCAGCSWGGGLHHGRQDAKA*GRPSRT
Trigger: GGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTG...GCGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCACCCTCGGAGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTTCGCATCTTGCCGGCTaGCGGTCCTGGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGSHLAG*RSWAMA
Trigger: CGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGA...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR CCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGGGCTGCAGCCTTCTGTaGCTGCCGGAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPGCSLL*LPELPP
Trigger: AGGAGGCAGCTCCGGCAGCCACAGAAGGCTGCAGCC...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCCGTGAGGACGCTGGCTaGCAGAGGCTGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPREDAG*QRLPAR
Trigger: CCGGGCCGGCAGCCTCTGCCAGCCAGCGTCCTCACG...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCCGCTTCTGTGCCTaGCAGTCCCCTGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASSSSSSEDSRANATVGGGRFCA*QSPGAG
Trigger: GCCTGCCCCAGGGGACTGTCAGGCACAGAAGCGGCC...CCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp CCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCTGGCCGCTTCTGTGCCTaGCAGTCCCCTGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPPPPLRTAGPTPRSAGAGRFCA*QSPGAG
Trigger: GCCTGCCCCAGGGGACTGTCAGGCACAGAAGCGGCC...AGCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp CGCTGCCTCCCGCAGGTGTGCCACGGCCTCCGCGCAGCCGAAGCCCGTCCTCCGATCGTCCTCCGAGGCTaGCTGCTGTCCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: RCLPQVCHGLRAAEARPPIVLRG*LLSRSK
Trigger: CTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGAT...CGGAGGACGGGCTTCGGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GTCCTCCGAGGGTGCGCGGGGTGCTCCTGGGGTGGAGGCCTCCACCACGGCCGCGAACGCCCAGAAAGTTaGGGACATGCTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: VLRGCAGCSWGGGLHHGRERPES*GHAGQG
Trigger: GCCCTGCCCAGCATGTCCTCAACTTTCTGGGCGTTC...GCGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCACCCTCGGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCGCCGGGCTCTCGTGGTaGCGGCGATCTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGAGLSW*RRSAPF
Trigger: GAAAGGGGCAGATCGCCGGCACCACGAGAGCCCGGC...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCTCCCGCCGGGCTGCGTaGACGTCCAGCCTGACCGGT +
Preference number: 4 (lower is better)
Translates to: AASSSSSSEDSRANATVGSRRAA*TSSLTG
Trigger: ACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGA...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGILPPG*VHVQPD
Trigger: GTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGAT...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp AATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGAACCCGGCCTCCCCGGGCACGGCAGCCTTCTGTGGCTaGCGGAGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NQEPSLARSEGNPASPGTAAFCG*RSCLLL
Trigger: GAGGAGGAGGCAGCTCCGGCAGCCACAGAAGGCTGC...CGTGCCCGGGGAGGCCGGGTTCCCCTCGCTGCGGGCCAGGCTTGGCTCCTGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGAACCCGGCCTCCCCGGGCACGGCGGGGACACAGGCGTaGGGAGAAGGGCCGTCAACT +
Preference number: 4 (lower is better)
Translates to: NQEPSLARSEGNPASPGTAGTQA*GEGPST
Trigger: AGTTGACGGCCCTTCTCCCCACGCCTGTGTCCCCGC...CGTGCCCGGGGAGGCCGGGTTCCCCTCGCTGCGGGCCAGGCTTGGCTCCTGATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GACCGACACATCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGGCCGGGCTCTCGTGGTaGCGGCGATCTGCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: DRHIRDADATVLRTLLPEAGLSW*RRSAPF
Trigger: GAAAGGGGCAGATCGCCGGCACCACGAGAGCCCGGC...CTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGTCAGGCGGGCTGGGCTaGAGCCTTCTGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQSGGLG*SLLWLP
Trigger: CGGCAGCCACAGAAGGCTGCAGCCCAGCCCGCCTGA...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGTCAGGCGGGCTGGGCTaGAGCCTTCTGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PRPEAVLHGPQGNGVGGRSGGLG*SLLWLP
Trigger: CGGCAGCCACAGAAGGCTGCAGCCCAGCCCGCCTGA...CCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAAGGAGGCCGCTTCTGTaGCTGACAGTCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPRRPLL*LTVPWG
Trigger: GCCCCAGGGGACTGTCAGGCACAGAAGCGGCCTCCT...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp ATGCCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCCCGTCCTCCGAGGGTaGGCGGGGTGCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MPRPEAVLHGPQGNGVGGPVLRG*AGCSWG
Trigger: ACCCCAGGAGCACCCCGCGCACCCTCGGAGGACGGG...CCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGTGCCTCCCGCAGGTGTaGCACGGCCTCCGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: EWAGGRERVKSEASGELWCLPQV*HGLRAA
Trigger: GGCTGCGCGGAGGCCGTGGCACACCTGCGGGAGGCA...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGACGTGGGGGCCGTCGCTaGCTCCCGCAGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGRGGRR*LPQVCH
Trigger: GTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACG...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGGAGTCCCGCCTTCCGTaGCTGGCACCCCGGGGTCCG +
Preference number: 4 (lower is better)
Translates to: EWAGGRERVKSEASGELWESRLP*LAPRGP
Trigger: CGGACCCCGGGGTGCCAGGCACGGAAGGCGGGACTC...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCGGCTGCAGCCTTCTGTaGCTGCCGGAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGGCSLL*LPELPP
Trigger: AGGAGGCAGCTCCGGCAGCCACAGAAGGCTGCAGCC...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCGTGTCTCAGGCGGGCTaGGCTGCAGCCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGVSQAG*AAAFCG
Trigger: GCCACAGAAGGCTGCAGCCCAGCCCGCCTGAGACAC...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGCAATTCGGACAGTCTaGGGCACGGGAGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: ASSSSSSEDSRANATVGGAIRTV*GTGGGR
Trigger: GCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGC...CCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCGGAGCCGGGGCAGCTTaGGAAGGACCCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPGAGAA*EGPFPG
Trigger: GCCTGGAAAGGGTCCTTCCCAAGCTGCCCCGGCTCC...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp TGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCCGGGGGCCGCTTCTGTGCCTaGCAGTCCCCTGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WRTVAETWALQGAKATPGGRFCA*QSPGAG
Trigger: GCCTGCCCCAGGGGACTGTCAGGCACAGAAGCGGCC...CCCGGGAGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCTGGCCTCAAGGTCCGTaGGTGGCGAAAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGWPQGP*VAKGAG
Trigger: TCCTGCCCCTTTCGCCACTCACGGACCTTGAGGCCA...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGACGCGGCCCCTGCCAGTaGCCAGAGCGCCTTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGRGPCQ*PERLQE
Trigger: CTCCTGAAGGCGCTCTGGGCACTGGCAGGGGCCGCG...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp GCCCTCCCGCCCGCACAAGCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGACCGAAGCTCAGGATaGCAAGGCCTGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: ALPPAQATPGTLTVRVRPDRSSG*QGLRPS
Trigger: GGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTC...TGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGCTTGTGCGGGCGGGAGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp GACCGACACATCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGAGGAGGCCGCTTCTGTaGCTGACAGTCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DRHIRDADATVLRTLLPERRPLL*LTVPWG
Trigger: GCCCCAGGGGACTGTCAGGCACAGAAGCGGCCTCCT...CTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTTGCGTTCCCGGCGTCTaGGTGGGGGCCGTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVCVPGV*VGAVAA
Trigger: GGCAGCGACGGCCCCCACGCAGACGCCGGGAACGCA...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCATCGTCCTCCGAGGCTaGCTGCTGTCCCGGTCCAAG +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPIVLRG*LLSRSK
Trigger: CTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGAT...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAACGGGCCGGGCTCTCGTaGTGCCGGCGATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: VLHGPQGNGVGGRQRTGERAGLS*CRRSAP
Trigger: AGGGGCAGATCGCCGGCACCACGAGAGCCCGGCCCG...TTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGGCAATTCGGACAGTCTaGGGCACGGGAGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQAIRTV*GTGGGR
Trigger: GCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGC...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp TCTTCAGAAACACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACTGCGCGGGGTGCTCCTaGGGTGGAGGCCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: SSETHGARPDSQDGRDCHCAGCS*GGGLHH
Trigger: GTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCA...GTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTGTTTCTGAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp TCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGTCCCGCCTTCGACTGCAGTAGGCGATaGGCAGGCTGGCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SGTPTPRSSARFSQSPAFDCSRR*AGWPGS
Trigger: TGATCCTGGCCAGCCTGCTCATCGCCTACTGCAGTC...GAAGGCGGGACTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR TCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACCCCGCCTATGTGTCTaGGTCCGGCCTCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGREPRLCV*VRPPRV
Trigger: GACCCGAGGAGGCCGGACTCAGACACATAGGCGGGG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp ACCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGCGAGGGGGAGGCCGTaGGGACGCTGGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TNTGTREGIRSQAWPAARARGRP*GRWLAE
Trigger: CTCTGCCAGCCAGCGTCCTCACGGCCTCCCCCTCGC...CCTCGCTGCGGGCCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGCACAGCGGGCGGTCTaGCGGGCGATCGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQAQRAV*RAIVLR
Trigger: TCGGAGGACGATCGCCCGGCAGACCGCCCGCTGTGC...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTTCCCGCCGGGCTGCGTaGACGTCCAGCCTGACCGGT +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATSRRAA*TSSLTG
Trigger: ACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGA...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: EWAGGRERVKSEASGELWILPPG*VHVQPD
Trigger: GTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGAT...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGGACCGAAGCTCAGGATaGCAAGGCCTGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: PRPEAVLHGPQGNGVGGRDRSSG*QGLRPS
Trigger: GGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTC...CCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp TCTTCAGAAACACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACTCAGGCGGGCTGGGCTaGAGCCTTCTGTGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSETHGARPDSQDGRDCHSGGLG*SLLWLP
Trigger: CGGCAGCCACAGAAGGCTGCAGCCCAGCCCGCCTGA...GTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTGTTTCTGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGTGTCTCTGCCACCATTaGCCTCCCGCCCGCACAAGC +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQCLCHH*PPARTS
Trigger: GCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACA...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCTGTCTCTGCCACCATTaGCCTCCCGCCCGCACAAGC +
Preference number: 4 (lower is better)
Translates to: AASSSSSSEDSRANATVGCLCHH*PPARTS
Trigger: GCTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACA...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGCCCGTCCTCCGAGGGTaGGCGGGGTGCTCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMPVLRG*AGCSWG
Trigger: ACCCCAGGAGCACCCCGCGCACCCTCGGAGGACGGG...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGTGCGTTCCCGGCGTCTaGGTGGGGGCCGTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMCVPGV*VGAVAA
Trigger: GGCAGCGACGGCCCCCACGCAGACGCCGGGAACGCA...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCCCCCGCCTGCGCCTCTaGCCGGCGCGACTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPPRLRL*PARLSG
Trigger: TCCAGAAAGTCGCGCCGGGCAGAGGCGCAGGCGGGG...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCCGGGCCGGGCTCTCGTaGTGCCGGCGATCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVRAGLS*CRRSAP
Trigger: AGGGGCAGATCGCCGGCACCACGAGAGCCCGGCCCG...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGCCTCCTCGGGTCGGCTaGACAGACCGAAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQPPRVG*TDRSSG
Trigger: TCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGG...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGCCTGACAGTCCCCTaGGGCAGGCGTCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGCLTVP*GRRRVS
Trigger: TGAGACACGACGCCTGCCCCAGGGGACTGTCAGGCA...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp ACCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGGGTGCTCCTGGGGTaGAGGCCTCCACCACGGCCG +
Preference number: 4 (lower is better)
Translates to: TNTGTREGIRSQAWPAARGVLLG*RPPPRP
Trigger: CGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCC...CCTCGCTGCGGGCCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCTTCCCGGCGTCTGCGTaGGGGCCGTCGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVFPASA*GPSLPP
Trigger: GGGAGGCAGCGACGGCCCCCACGCAGACGCCGGGAA...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GTCCTCCGAGGGTGCGCGGGGTGCTCCTGGGGTGGAGGCCTCCACCACGGCCGCTGTACGCTCAAGTGTTaGCCAATACAGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: VLRGCAGCSWGGGLHHGRCTLKC*PIQGPE
Trigger: CTCTGGTCCCTGTATTGGTCAACACTTGAGCGTACA...GCGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCACCCTCGGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp AATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGGAACCCGGCCTCCCCGGGCACGGGGAACTCAGGAAAATaGAGGAGGCTGGCGAACGAC +
Preference number: 4 (lower is better)
Translates to: NQEPSLARSEGNPASPGTGNSGK*RRLAND
Trigger: GTCGTTCGCCAGCCTCCTTCATTTTCCTGAGTTCCC...CGTGCCCGGGGAGGCCGGGTTCCCCTCGCTGCGGGCCAGGCTTGGCTCCTGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCGCACAGCGGGCGGTCTaGCGGGCGATCGTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVAQRAV*RAIVLR
Trigger: TCGGAGGACGATCGCCCGGCAGACCGCCCGCTGTGC...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGGCAGAGCGCGGCCCCTaGCAGTGCCCAGAGCGCCTT +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMAERGP*QCPERL
Trigger: AAGGCGCTCTGGGCACTGGCAGGGGCCGCGCTCTGC...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCAGCCTTCTGTGGCTaGCGGAGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: TDHRETEWAGGRERVKSEAAFCG*RSCLLL
Trigger: GAGGAGGAGGCAGCTCCGGCAGCCACAGAAGGCTGC...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGGTCAGGAGACCGTGGTaGTCTTTATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQVRRPW*SLSSRR
Trigger: CCGGCGGGAGGATAAAGACCACCACGGTCTCCTGAC...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GACCGACACATCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: DRHIRDADATVLRTLLPEASGEL*LRRGLS
Trigger: GGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGC...CTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGACACAGGGAAACGGAGTaGGCGGGCGGCAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGHRETE*AGGRER
Trigger: CCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTG...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGTGTCTCAGGCGGGCTaGGCTGCAGCCTTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TDHRETEWAGGRERVKSEVSQAG*AAAFCG
Trigger: GCCACAGAAGGCTGCAGCCCAGCCCGCCTGAGACAC...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp TGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCCGGGGTGGAGAACTGTGGCTaGGACGTGGGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRTVAETWALQGAKATPGVENCG*DVGSPG
Trigger: CCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCAC...CCCGGGAGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTGCGGCAGAGAACGGGTaGAGTCCGAGGCGAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATAAENG*SPRRVE
Trigger: CTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGC...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCGGGAACTCAGGAAAATaGAGGAGGCTGGCGAACGAC +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPGNSGK*RRLAND
Trigger: GTCGTTCGCCAGCCTCCTTCATTTTCCTGAGTTCCC...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp TGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCCGGGTCCTCCGAGGCTGGCTaGTGTCCCGGTCCAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WRTVAETWALQGAKATPGSSEAG*CPGPRS
Trigger: TGACCTTGGACCGGGACAGCAGCCAGCCTCGGAGGA...CCCGGGAGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGREPPACL*HHCPPA
Trigger: GGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACCTCCTCGGGTCGGCTaGACAGACCGAAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGREPPRVG*TDRSSG
Trigger: TCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTGGCTGCAGCCTTCTGTaGCTGCCGGAGCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATGCSLL*LPELPP
Trigger: AGGAGGCAGCTCCGGCAGCCACAGAAGGCTGCAGCC...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGCAATTCGGACAGTCTaGGGCACGGGAGGAGGCCGC +
Preference number: 4 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQAIRTV*GTGGGR
Trigger: GCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGC...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGCGGGGACACAGGCGTaGGGAGAAGGGCCGTCAACT +
Preference number: 4 (lower is better)
Translates to: VLHGPQGNGVGGRQRTGEAGTQA*GEGPST
Trigger: AGTTGACGGCCCTTCTCCCCACGCCTGTGTCCCCGC...TTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTGGAGCCGGGGCAGCTTaGGAAGGACCCTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVGAGAA*EGPFPG
Trigger: GCCTGGAAAGGGTCCTTCCCAAGCTGCCCCGGCTCC...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTGTGGAGAACTGTGGCTaGGACGTGGGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATVENCG*DVGSPG
Trigger: CCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCAC...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAAAGCGCCTTCAGGAGCTaGATCGCGGAGTCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGRESAFRS*IAESQL
Trigger: GAGTTGGGACTCCGCGATGCAGCTCCTGAAGGCGCT...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAAAGGAATAAAGCGGCCTaGGTTCCCGGCGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGRERNKAA*VPGVCV
Trigger: CACGCAGACGCCGGGAACGCAGGCCGCTTTATTCCT...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCTTTGTCAGGAGACCGTaGTGGTCTTTATCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPFVRRP*WSLSSR
Trigger: GCGGGAGGATAAAGACCACCACGGTCTCCTGACAAA...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGCACAGGGAAACGGAGTaGGCGGGCGGCAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMHRETE*AGGRER
Trigger: CCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTG...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCTCCTCGGGTCGGCTaGACAGACCGAAGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATPPRVG*TDRSSG
Trigger: TCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGG...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCGGGGTGCTCCTGGGGTaGAGGCCTCCACCACGGCCG +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCGVLLG*RPPPRP
Trigger: CGGCCGTGGTGGAGGCCTCCACCCCAGGAGCACCCC...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGCTGGCCATTCCCGGTaGTGGTACATTTCGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AASSSSSSEDSRANATVGAGHSR*WYISGV
Trigger: AACACCCGAAATGTACCACCACCGGGAATGGCCAGC...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR TCA 90 bp AGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: RERVKSEASGELWLRRGLQDAKA*GRPSRT
Trigger: GGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTG...GAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACACCCCGCCTATGTGTCTaGGTCCGGCCTCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTPRLCV*VRPPRV
Trigger: GACCCGAGGAGGCCGGACTCAGACACATAGGCGGGG...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGTGGCCTCAAGGTCCGTaGGTGGCGAAAGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMWPQGP*VAKGAG
Trigger: TCCTGCCCCTTTCGCCACTCACGGACCTTGAGGCCA...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGTCACAATCTCACAGGTaGCGGCGGCCAGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: TDHRETEWAGGRERVKSESQSHR*RRPADL
Trigger: AAGGTCAGCTGGCCGCCGGCACCTGTGAGATTGTGA...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCGACCGAAGCTCAGGATaGCAAGGCCTGAGGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVDRSSG*QGLRPS
Trigger: GGACGGCCTCAGGCCTTGGCATCCTGAGCTTCGGTC...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGCCACCAGCATGTCTCTaGCACCATTGCCCTCCCGCC +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMPPACL*HHCPPA
Trigger: GGCGGGAGGGCAATGGTGGCAGAGACATGCTGGTGG...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCAGGAATAAAGCGGCCTaGGTTCCCGGCGTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPRNKAA*VPGVCV
Trigger: CACGCAGACGCCGGGAACGCAGGCCGCTTTATTCCT...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCCCCCGCCTGCGCCTCTaGCCGGCGCGACTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCPRLRL*PARLSG
Trigger: TCCAGAAAGTCGCGCCGGGCAGAGGCGCAGGCGGGG...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTTTGTCAGGAGACCGTaGTGGTCTTTATCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGFVRRP*WSLSSR
Trigger: GCGGGAGGATAAAGACCACCACGGTCTCCTGACAAA...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp TCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGACTGTGGCTGAGACGTaGGCTCTCCAGGGAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SEASGELWLRRGLSREPRTVAET*ALQGAK
Trigger: CTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGT...CCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCCACAGGGAAACGGAGTaGGCGGGCGGCAGAGAACGG +
Preference number: 4 (lower is better)
Translates to: RERVKSEASGELWLRRGLHRETE*AGGRER
Trigger: CCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTG...GAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGCCGGCTGCCGGTCCTaGGCGATGGCGCCATTGAAG +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTAGCRS*AMAPLK
Trigger: CTTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGC...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR TCA 90 bp TCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGGGCTGGCCAGGATCATaGACGCCCAGAAAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SEASGELWLRRGLSREPRGWPGS*TPRKLR
Trigger: CCTCAACTTTCTGGGCGTTCATGATCCTGGCCAGCC...CCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR GCA 90 bp ACCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGGCCCGCAGCGAGGGTGGTGCCGGCGATCTaGCCCTTTCTACACGCACAG +
Preference number: 4 (lower is better)
Translates to: TNTGTREGIRSQAWPAARVVPAI*PFLHAQ
Trigger: CTGTGCGTGTAGAAAGGGGCAGATCGCCGGCACCAC...CCTCGCTGCGGGCCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGGTCTTGATGATTCTTaGGTCCACACAGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQGLDDS*VHTGGP
Trigger: CGGCCCGCCTGTGTGGACGCAAGAATCATCAAGACC...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGCAGCCTTCTGTGGCTaGCGGAGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTAAFCG*RSCLLL
Trigger: GAGGAGGAGGCAGCTCCGGCAGCCACAGAAGGCTGC...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTCCTCTACTCGAGTTTTCTTTaGTTTCTGGAGCTAAATGGG +
Preference number: 4 (lower is better)
Translates to: PGLPGHDRHIRDADATVLYSSFL*FLELNG
Trigger: CCCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTA...GAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAAAAGTTGAGGACATGCTaGGCAGGGCGGTCGCATCTT +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGREKLRTC*AGRSHL
Trigger: AAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTT...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR CCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTGCCTGACAGTCCCCTaGGGCAGGCGTCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RERVKSEASGELWLRRGLCLTVP*GRRRVS
Trigger: TGAGACACGACGCCTGCCCCAGGGGACTGTCAGGCA...GAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGACTCAAGGTCCGTGAGTaGCGAAAGGGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGLKVRE*RKGQEM
Trigger: CATTTCCTGCCCCTTTCGCCACTCACGGACCTTGAG...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGAAAATGAAGGAGGCTaGCGAACGACGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQENEGG*RTTARG
Trigger: TCCCCTGGCCGTCGTTCGCCAGCCTCCTTCATTTTC...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCTTGATGATTCTTGCTaGCCATTCCCGGTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: PRPEAVLHGPQGNGVGGRLDDSC*PFPVVV
Trigger: TACCACCACCGGGAATGGCCAGCAAGAATCATCAAG...CCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR TCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGATCCAGCCTGACCGGTTaGTTAACAAGTCGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGSSLTG*LTSRSL
Trigger: AAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGA...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTGGAGAACTGTGGCTaGGACGTGGGCTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTVENCG*DVGSPG
Trigger: CCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCAC...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR TCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCCAGGATGCCAAGGCCTaGGGCCGTCCTTCACGGACC +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCQDAKA*GRPSRT
Trigger: GGTCCGTGAAGGACGGCCTCAGGCCTTGGCATCCTG...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCGGGCTCCCACAGACTaGGTATTGCTGATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVRAPTD*VLLMPG
Trigger: ACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCG...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCAGGAGGCCGCTTCTGTaGCTGACAGTCCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCRRPLL*LTVPWG
Trigger: GCCCCAGGGGACTGTCAGGCACAGAAGCGGCCTCCT...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ATGCCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGTTGAGGAACTGCGCGTaGATCACTAGGACGAGGAAG +
Preference number: 4 (lower is better)
Translates to: MPRPEAVLHGPQGNGVGGLRNCA*ITRTRK
Trigger: CTTCCTCGTCCTAGTGATCCACGCGCAGTTCCTCAA...CCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR CCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCGAAGTCCGAGGCGAGTaGAGAACTGTGGCTGAGACG +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVEVRGE*RTVAET
Trigger: CGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTC...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCGACCCAACATGCTCTTaGCAGATACTGGATTATCCA +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPDPTCS*QILDYP
Trigger: TGGATAATCCAGTATCTGCCAAGAGCATGTTGGGTC...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCCTCAAGGTCCGTGAGTaGCGAAAGGGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPLKVRE*RKGQEM
Trigger: CATTTCCTGCCCCTTTCGCCACTCACGGACCTTGAG...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCGAAAATGAAGGAGGCTaGCGAACGACGGCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVENEGG*RTTARG
Trigger: TCCCCTGGCCGTCGTTCGCCAGCCTCCTTCATTTTC...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGGCCATTCCCGGTGGTaGTACATTTCGGGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: TDHRETEWAGGRERVKSEGHSRW*YISGVC
Trigger: ACAAACACCCGAAATGTACCACCACCGGGAATGGCC...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR GCA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCTCACAATCTCACAGGTaGCGGCGGCCAGCTGACTGC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCSQSHR*RRPADC
Trigger: GCAGTCAGCTGGCCGCCGGCACCTGTGAGATTGTGA...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR GCA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCGTGGTGCCGGCGATCTaGCCCTTTCTACACGCACAG +
Preference number: 4 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCVVPAI*PFLHAQ
Trigger: CTGTGCGTGTAGAAAGGGGCAGATCGCCGGCACCAC...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTCCTTCTTTGAGGAACTaGGCGTGGATCACTAGGACG +
Preference number: 4 (lower is better)
Translates to: GEWRTVAETWALQGAKATPSLRN*AWITRT
Trigger: CGTCCTAGTGATCCACGCGCAGTTCCTCAAAGAAGG...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCGAAGGTGTCTACACTTaGTTTCAAAAGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGEGVYT*FQKKQA
Trigger: CGCCTGTTTCTTTTGAAAGCAAGTGTAGACACCTTC...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGAAATCTCCCGATCTCTaGCCTCGAAGGTGTCTACAC +
Preference number: 4 (lower is better)
Translates to: EWAGGRERVKSEASGELWKSPDL*PRRCLH
Trigger: GTGTAGACACCTTCGAGGGCAGAGATCGGGAGATTT...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCCATTTCGGGTGTTTGTaGTTTCCTGGTTTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AASSSSSSEDSRANATVGHFGCL*FPGFSL
Trigger: GAGGGAAAAACCAGGAAAGCACAAACACCCGAAATG...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR CCA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCGTCAGGAGACCGTGGTaGTCTTTATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCVRRPW*SLSSRR
Trigger: CCGGCGGGAGGATAAAGACCACCACGGTCTCCTGAC...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCASGEL*LRRGLS
Trigger: GGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGC...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGCGAGTGGAGAACTGTaGCTGAGACGTGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTASGEL*LRRGLS
Trigger: GGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGC...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CCA 90 bp GCTGGCGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCTGCCTGACAGTCCCCTaGGGCAGGCGTCGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: AGERRPGEKNQNCRLFLGCLTVP*GRRRVS
Trigger: TGAGACACGACGCCTGCCCCAGGGGACTGTCAGGCA...GCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGGACCCAACATGCTCTTaGCAGATACTGGATTATCCA +
Preference number: 4 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGDPTCS*QILDYP
Trigger: TGGATAATCCAGTATCTGCCAAGAGCATGTTGGGTC...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGCATGTCACACCACTaGTTGGTCTTGATGATTCTT +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQSMSHH*LVLMIL
Trigger: AAGAATCATCAAGACCAAGCAGTGGTGTGACATGCT...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACACGGGCTCCCACAGACTaGGTATTGCTGATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTRAPTD*VLLMPG
Trigger: ACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCG...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCACGGGAGACCCAACATaGTCTTGGCAGATACTGGAT +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPTGDPT*SWQILD
Trigger: ATCCAGTATCTGCCAAGAGCATGTTGGGTCTCCCGT...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCGTCAGGAGACCGTGGTaGTCTTTATCCTCCCGCCGG +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCVRRPW*SLSSRR
Trigger: CCGGCGGGAGGATAAAGACCACCACGGTCTCCTGAC...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCTTTGTCAGGAGACCGTaGTGGTCTTTATCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVFVRRP*WSLSSR
Trigger: GCGGGAGGATAAAGACCACCACGGTCTCCTGACAAA...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACTTTCTGGAGCTAAATaGGGTATCGATGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRPSFTDHRETEWAGGRELSGAK*GIDEAA
Trigger: TGCTGCCTCATCGATACCCCATTTAGCTCCAGAAAG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGCGTATCTTCAGTCTATaGTTGCTGGAACAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGRIFSL*LLEQLL
Trigger: TAGAAGCTGTTCCAGCAACCATAGACTGAAGATACG...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCGGTCTTGATGATTCTTaGGTCCACACAGGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCGLDDS*VHTGGP
Trigger: CGGCCCGCCTGTGTGGACGCAAGAATCATCAAGACC...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCACGGGAGACCCAACATaGTCTTGGCAGATACTGGAT +
Preference number: 4 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVTGDPT*SWQILD
Trigger: ATCCAGTATCTGCCAAGAGCATGTTGGGTCTCCCGT...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGTACTCGAGTTTTCTTTaGTTTCTGGAGCTAAATGGG +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQYSSFL*FLELNG
Trigger: CCCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTA...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTCTTTCTGGAGCTAAATaGGGTATCGATGAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVLSGAK*GIDEAA
Trigger: TGCTGCCTCATCGATACCCCATTTAGCTCCAGAAAG...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCGGAAACAAAACCCATTaGAAGAAGCATGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: WARPGSHRLRIADARCRPGNKTH*KKHVQD
Trigger: ATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCC...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCGGAAACAAAACCCATTaGAAGAAGCATGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSSSSSEDSRANATVGGGGNKTH*KKHVQD
Trigger: ATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCC...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp GCTGGCGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCAGCTGACCTTCTTTaGGGAACTGCGCGTGGATCA +
Preference number: 4 (lower is better)
Translates to: AGERRPGEKNQNCRLFLGPADLL*GTARGS
Trigger: TGATCCACGCGCAGTTCCTCAAAGAAGGTCAGCTGG...GCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358295.9
CDS-3UTR GCA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGGAAGGTGTCTACACTTaGTTTCAAAAGAAACAGGCG +
Preference number: 4 (lower is better)
Translates to: EWAGGRERVKSEASGELWEGVYT*FQKKQA
Trigger: CGCCTGTTTCTTTTGAAAGCAAGTGTAGACACCTTC...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGGCTCTTGGCAGATACTaGATTATCCAACTATCAAAA +
Preference number: 4 (lower is better)
Translates to: RPEAVLHGPQGNGVGGRQALGRY*IIQLSK
Trigger: TTTTGATAGTTGGATAATCCAGTATCTGCCAAGAGC...CTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp CGAACGACGGCCAGGGGAGAAAAACCAGAATTGTCGCTTATTCCTCGGCCCTGCTCCAGCCTGACCGGTTaGTTAACAAGTCGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RTTARGEKPELSLIPRPCSSLTG*LTSRSL
Trigger: AAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGA...GCAGGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCCCCTGGCCGTCGTTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAAGCATGTCACACCACTaGTTGGTCTTGATGATTCTT +
Preference number: 4 (lower is better)
Translates to: VLHGPQGNGVGGRQRTGESMSHH*LVLMIL
Trigger: AAGAATCATCAAGACCAAGCAGTGGTGTGACATGCT...TTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR GCA 90 bp CACACGGGGCTCGGCCCGACTCTCAGGACGGCCGGGACTGCCACGTTAATTGTTAGCATGTCACACCACTaGTTGGTCTTGATGATTCTT +
Preference number: 4 (lower is better)
Translates to: HTGLGPTLRTAGTATLIVSMSHH*LVLMIL
Trigger: AAGAATCATCAAGACCAAGCAGTGGTGTGACATGCT...AACAATTAACGTGGCAGTCCCGGCCGTCCTGAGAGTCGGGCCGAGCCCCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAATACAGGGACCAGCGTGAGGACGCTGGCTaGCAGAGGCTGCCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKHVQDIVRSSVDQYRDQREDAG*QRLPAR
Trigger: CCGGGCCGGCAGCCTCTGCCAGCCAGCGTCCTCACG...CTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp GTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAACTTAGGGCAAATTTCTaGGAGCAGAATTATGGGATG +
Preference number: 4 (lower is better)
Translates to: VLHGPQGNGVGGRQRTGELRANF*EQNYGM
Trigger: CATCCCATAATTCTGCTCCCAGAAATTTGCCCTAAG...TTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR TCA 90 bp AGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGATTAGTACGGTCAAGTTaGTCTAAGTACAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: RETEWAGGRERVKSEASGLVRSS*SKYRGI
Trigger: TATTCCTCTGTACTTAGATCAACTTGACCGTACTAA...TCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp GGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTCGTGGGGGCCGTCGCTaGCTCCCGCAGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKQNPLEEACSRYCTLKCRGGRR*LPQVCH
Trigger: GTGGCACACCTGCGGGAGGCAGCGACGGCCCCCACG...ACACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAATACAGGGACCAGTGCGCGGGGTGCTCCTaGGGTGGAGGCCTCCACCAC +
Preference number: 4 (lower is better)
Translates to: KKHVQDIVRSSVDQYRDQCAGCS*GGGLHH
Trigger: GTGGTGGAGGCCTCCACCCCAGGAGCACCCCGCGCA...CTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCTCTTGGCAGATACTaGATTATCCAACTATCAAAA +
Preference number: 4 (lower is better)
Translates to: TDHRETEWAGGRERVKSEALGRY*IIQLSK
Trigger: TTTTGATAGTTGGATAATCCAGTATCTGCCAAGAGC...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCGTATCTTCAGTCTATaGTTGCTGGAACAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVRIFSL*LLEQLL
Trigger: TAGAAGCTGTTCCAGCAACCATAGACTGAAGATACG...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCAGAGGCATGTTTAACTaGTTAAAACAGAAAGGGATT +
Preference number: 4 (lower is better)
Translates to: QFGQSGAREEAASVPDSPRGMFN*LKQKGI
Trigger: AATCCCTTTCTGTTTTAACCAGTTAAACATGCCTCT...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGCCCCGCCTATGTGTCTaGGTCCGGCCTCCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWPRLCV*VRPPRV
Trigger: GACCCGAGGAGGCCGGACTCAGACACATAGGCGGGG...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKILPPG*VHVQPD
Trigger: GTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGAT...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGGATGAGAGGCATGTTTAACTaGTTAAAACAGAAAGGGATT +
Preference number: 4 (lower is better)
Translates to: MCLSPASSGRLDRPKLRMRGMFN*LKQKGI
Trigger: AATCCCTTTCTGTTTTAACCAGTTAAACATGCCTCT...CATCCTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp AAAAGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACATTAGTACGGTCAAGTTaGTCTAAGTACAGAGGAATA +
Preference number: 4 (lower is better)
Translates to: KSNSDSLGHGRRPLLCLTLVRSS*SKYRGI
Trigger: TATTCCTCTGTACTTAGATCAACTTGACCGTACTAA...TGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CAA 72 bp GGAAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTaGACCAATACAGGGACCAGAGAGGGAATCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRSMFKILYAQV*TNTGTREGIRS
Trigger: GCTCCTGATTCCCTCTCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR TCA 90 bp AAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAATACAGGGACCAGTGTACGCTCAAGTGTTaGCCAATACAGGGACCAGAG +
Preference number: 4 (lower is better)
Translates to: KKHVQDIVRSSVDQYRDQCTLKC*PIQGPE
Trigger: CTCTGGTCCCTGTATTGGTCAACACTTGAGCGTACA...CTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp AATGGGAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATTGTACGCTCAAGAGAAAGTTGAGGACATaGTGGGCAGGGCGGTCGCAT +
Preference number: 4 (lower is better)
Translates to: NGKQNPLEEACSRYCTLKRKLRT*WAGRSH
Trigger: ATGCGACCGCCCTGCCCAGCATGTCCTCAACTTTCT...CTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTCCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR GCA 90 bp ATTATGTCCTCATGGATACCGGAACAGGTCTTAAATAAATGGATTTTCTTTCGTCGGGCTCCCACAGACTaGGTATTGCTGATGCCAGGT +
Preference number: 4 (lower is better)
Translates to: IMSSWIPEQVLNKWIFFRRAPTD*VLLMPG
Trigger: ACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCG...ACGAAAGAAAATCCATTTATTTAAGACCTGTTCCGGTATCCATGAGGACATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR GCA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGAAATCTCCCGATCTCTaGCCTCGAAGGTGTCTACAC +
Preference number: 4 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWKSPDL*PRRCLH
Trigger: GTGTAGACACCTTCGAGGGCAGAGATCGGGAGATTT...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
3UTR CAA 72 bp GAAACAAAACCCATTGGAAGAAGCATGTTCAAGATATaGTACGCTCAAGTGTTGACCAATACAGGGACCAGA +
Preference number: 4 (lower is better)
Translates to: ETKPIGRSMFKI*YAQVLTNTGTR
Trigger: TCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTTCCAATGGGTTTTGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGTCAGTCTATGGTTGCTaGAACAGCTTCTATATAGTT +
Preference number: 4 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWSVYGC*NSFYIV
Trigger: AACTATATAGAAGCTGTTCCAGCAACCATAGACTGA...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CCA 90 bp ATTATGTCCTCATGGATACCGGAACAGGTCTTAAATAAATGGATTTTCTTTCGTTCAGTCTATGGTTGCTaGAACAGCTTCTATATAGTT +
Preference number: 4 (lower is better)
Translates to: IMSSWIPEQVLNKWIFFRSVYGC*NSFYIV
Trigger: AACTATATAGAAGCTGTTCCAGCAACCATAGACTGA...ACGAAAGAAAATCCATTTATTTAAGACCTGTTCCGGTATCCATGAGGACATAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp TCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGTCCCGCCTTCCGGAGCCGGGGCAGCTaGGGAAGGACCCTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SGTPTPRSSARFSQSPAFRSRGS*GRTLSR
Trigger: CCTGGAAAGGGTCCTTCCCAAGCTGCCCCGGCTCCG...GAAGGCGGGACTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp TCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGGGGCCGGAGCCGGGGCAGCTaGGGAAGGACCCTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSSSSSEDSRANATVGGGRSRGS*GRTLSR
Trigger: CCTGGAAAGGGTCCTTCCCAAGCTGCCCCGGCTCCG...GCCCCCGCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp ACGCACAGCGGGCGGTCTGCCGGGCGATCGTCCTCCGAGGCTGGCTaGTGTCCCGGTCCAAGGTCACAATCTCACAGGTGCCGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: THSGRSAGRSSSEAG*CPGPRSQSHRCRRP
Trigger: TGGCCGCCGGCACCTGTGAGATTGTGACCTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGATCGCCCGGCAGACCGCCCGCTGTGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp AGAAAGTTGAGGACATGCTGGGCAGGGCGGTCGCATCTTGCCGGCTaGCGGTCCTGGGCGATGGCGCCATTGAAGCCGCGGCGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: RKLRTCWAGRSHLAG*RSWAMAPLKPRRPR
Trigger: GCGCGGGCGCCGCGGCTTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTTTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR CAA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTTGGGCGATGGCGCCATaGAAGCCGCGGCGCCCGCGC +
Preference number: 5 (lower is better)
Translates to: GEWRTVAETWALQGAKATWAMAP*KPRRPR
Trigger: GCGCGGGCGCCGCGGCTTCAATGGCGCCATCGCCCA...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS CCA 90 bp CTACACGCACAGCGGGCGGTCTGCCGGGCGATCGTCCTCCGAGGCTaGCTGCTGTCCCGGTCCAAGGTCACAATCTCACAGGTGCCGGCG +
Preference number: 5 (lower is better)
Translates to: LHAQRAVCRAIVLRG*LLSRSKVTISQVPA
Trigger: CGCCGGCACCTGTGAGATTGTGACCTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGATCGCCCGGCAGACCGCCCGCTGTGCGTGTAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp AACGCCCAGAAAGTTGAGGACATGCTGGGCAGGGCGGTCGCATCTTaGCGGCTGCCGGTCCTGGGCGATGGCGCCATTGAAGCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: NAQKVEDMLGRAVAS*RLPVLGDGAIEAAA
Trigger: CGCCGCGGCTTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTTTCTGGGCGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR CAA 90 bp AGCAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCAGGGCGGTCGCATCTaGCCGGCTGCCGGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SNSDSLGHGRRPLLCLTVQGGRI*PAAGPG
Trigger: CCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTG...GACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS-3UTR CAA 90 bp GACCGACACATCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGCCCACAGACTGCGTATaGCTGATGCCAGGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: DRHIRDADATVLRTLLPEPTDCV*LMPGAA
Trigger: GGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGG...CTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS CCA 90 bp TGGCTGGGCCTCAGCCACCTTCTCCTGTCTGCAAGGTGGGAGCCCTaGCAGAGCAGGGATGTGCGAAGATCTCTGGAGCCCAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: WLGLSHLLLSARWEP*QSRDVRRSLEPREP
Trigger: CGGCTCCCTGGGCTCCAGAGATCTTCGCACATCCCTGCTCTGCCAGGGCTCCCACCTTGCAGACAGGAGAAGGTGGCTGAGGCCCAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336769.9
CDS-3UTR CAA 90 bp ATGCCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCCCACAGACTGCGTATaGCTGATGCCAGGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: MPRPEAVLHGPQGNGVGGPTDCV*LMPGAA
Trigger: GGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGG...CCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CAA 90 bp ACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGATGTCTCTGCCACCATaGCCCTCCCGCCCGCACAAG +
Preference number: 5 (lower is better)
Translates to: TDHRETEWAGGRERVKSEMSLPP*PSRPHK
Trigger: CTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACAT...CTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GGAACCCGGCCTCCCCGGGCACGACCGACACATCCGGGACGCCGACGCCACGGTATGTCACACCACTGCTaGGTCTTGATGATTCTTGCG +
Preference number: 5 (lower is better)
Translates to: GTRPPRARPTHPGRRRHGMSHHC*VLMILA
Trigger: CGCAAGAATCATCAAGACCAAGCAGTGGTGTGACAT...ACCGTGGCGTCGGCGTCCCGGATGTGTCGGTCGTGCCCGGGGAGGCCGGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCCTCAGGGGCTGTGTTaGTCAGGAGACCGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: EWAGGRERVKSEASGELWPQGLC*SGDRGG
Trigger: ACCACCACGGTCTCCTGACAAACACAGCCCCTGAGG...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CAA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGATGTCTCTGCCACCATaGCCCTCCCGCCCGCACAAG +
Preference number: 5 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQMSLPP*PSRPHK
Trigger: CTTGTGCGGGCGGGAGGGCAATGGTGGCAGAGACAT...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS TCA 90 bp GTAGGCGATGAGCAGGCTGGCCAGGATCATGAACGCCCAGAAAGTTaGGGACATGCTGGGCAGGGCGGTCGCATCTTGCCGGCTGCCGGT +
Preference number: 5 (lower is better)
Translates to: VGDEQAGQDHERPES*GHAGQGGRILPAAG
Trigger: ACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTTTCTGGGCGTTCATGATCCTGGCCAGCCTGCTCATCGCCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336769.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GCCTATGTGTCTGAGTCCGGCCTCCTCGGGTCGGCTGGACAGACCGAAGCTCAGCCTCAGGGGCTGTGTTaGTCAGGAGACCGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: AYVSESGLLGSAGQTEAQPQGLC*SGDRGG
Trigger: ACCACCACGGTCTCCTGACAAACACAGCCCCTGAGG...CTGAGCTTCGGTCTGTCCAGCCGACCCGAGGAGGCCGGACTCAGACACATAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CAA 90 bp ACCAATACAGGGACCAGAGAGGGAATCAGGAGCCAAGCCTGGCCCGCAGCGAGGCCCACAGACTGCGTATaGCTGATGCCAGGTGCCGCC +
Preference number: 5 (lower is better)
Translates to: TNTGTREGIRSQAWPAARPTDCV*LMPGAA
Trigger: GGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGG...CCTCGCTGCGGGCCAGGCTTGGCTCCTGATTCCCTCTCTGGTCCCTGTATTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCCACCACTGCTTGGTCTaGATGATTCTTGCTGGCCAT +
Preference number: 5 (lower is better)
Translates to: WARPGSHRLRIADARCRPHHCLV*MILAGH
Trigger: ATGGCCAGCAAGAATCATCAAGACCAAGCAGTGGTG...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR CAA 90 bp GAGTGGGCGGGCGGCAGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGGTCCAGCCTGACCGGTaGATTAACAAGTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: EWAGGRERVKSEASGELWVQPDR*INKSQP
Trigger: AGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGAC...CCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCTGCCGCCCGCCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CAA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGGAGAAAAACCAGAATaGTCGCTTATTCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: AASSSSSSEDSRANATVGGEKPE*SLIPRP
Trigger: GGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCC...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp GGAGGTTTGGAGGGTGACGTGGTGGTCTTTATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGACCGGTTGATTAACAAGTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GGLEGDVVVFILPPG*VHVQPDRLINKSQP
Trigger: AGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGACCACCACGTCACCCTCCAAACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336769.9
CDS-3UTR CAA 90 bp GGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTTGTACGCTCAAGTGTaGACCAATACAGGGACCAGA +
Preference number: 5 (lower is better)
Translates to: GRPSRTTGKRSGRAAENGLYAQV*TNTGTR
Trigger: TCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAA...CCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp CCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGTTGTACGCTCAAGTGTaGACCAATACAGGGACCAGA +
Preference number: 5 (lower is better)
Translates to: PRPEAVLHGPQGNGVGGRLYAQV*TNTGTR
Trigger: TCTGGTCCCTGTATTGGTCAACACTTGAGCGTACAA...CCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp TGGGCGCGGCCGGGCTCCCACAGACTGCGTATTGCTGATGCCAGGTGCCGCCCCATGTCACACCACTGCTaGGTCTTGATGATTCTTGCT +
Preference number: 5 (lower is better)
Translates to: WARPGSHRLRIADARCRPMSHHC*VLMILA
Trigger: AGCAAGAATCATCAAGACCAAGCAGTGGTGTGACAT...GGGGCGGCACCTGGCATCAGCAATACGCAGTCTGTGGGAGCCCGGCCGCGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS TCA 90 bp TCTTTATCCTCCCGCCGGGCTGCGTGCACGTCCAGCCTGACCGGTTaGTTAACAAGTCGCAGCCTTCCCCCTCCAGACACGGAAGCATGT +
Preference number: 5 (lower is better)
Translates to: SLSSRRAACTSSLTG*LTSRSLPPPDTEAC
Trigger: ACATGCTTCCGTGTCTGGAGGGGGAAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS GCA 90 bp AAGTCGCAGCCTTCCCCCTCCAGACACGGAAGCATGTCACACCACTaGTTGGTCTTGATGATTCTTGCGTCCACACAGGCGGGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: KSQPSPSRHGSMSHH*LVLMILASTQAGRA
Trigger: AGCCCGGCCCGCCTGTGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGAGGGGGAAGGCTGCGACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACACCACTGCTTGGTCTaGATGATTCTTGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: LRPSFTDHRETEWAGGREHHCLV*MILAST
Trigger: TGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp ATGCCAAGGCCTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCACCACTGCTTGGTCTaGATGATTCTTGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: MPRPEAVLHGPQGNGVGGHHCLV*MILAST
Trigger: TGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTG...CCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAGGCCTTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GCTGCCTCCTCCTCCTCCTCCTCTGAGGACAGCAGGGCCAACGCCACGGTCGGCGTACATTTCGGGTGTTaGTGCTTTCCTGGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: AASSSSSSEDSRANATVGVHFGC*CFPGFS
Trigger: GGAAAAACCAGGAAAGCACAAACACCCGAAATGTAC...GCCGACCGTGGCGTTGGCCCTGCTGTCCTCAGAGGAGGAGGAGGAGGAGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS GCA 90 bp TGTGTTTGTCAGGAGACCGTGGTGGTCTTTATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGACCGGTTGATTAACAAGTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: CVCQETVVVFILPPG*VHVQPDRLINKSQP
Trigger: AGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGACCACCACGGTCTCCTGACAAACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS-3UTR CAA 90 bp GACCGACACATCCGGGACGCCGACGCCACGGTCCTCCGCACGCTTCTCCCAGAGAGCATGTTCAAGATATaGTACGCTCAAGTGTTGACC +
Preference number: 5 (lower is better)
Translates to: DRHIRDADATVLRTLLPESMFKI*YAQVLT
Trigger: GGTCAACACTTGAGCGTACAATATCTTGAACATGCT...CTCTGGGAGAAGCGTGCGGAGGACCGTGGCGTCGGCGTCCCGGATGTGTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCGTCCAGCCTGACCGGTaGATTAACAAGTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCVQPDR*INKSQP
Trigger: AGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGAC...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
CDS-3UTR CAA 90 bp CAATTCGGACAGTCTGGGGCACGGGAGGAGGCCGCTTCTGTGCCTGACAGTCCCAGACCCAACATGCTCTaGGCAGATACTGGATTATCC +
Preference number: 5 (lower is better)
Translates to: QFGQSGAREEAASVPDSPRPNML*ADTGLS
Trigger: GGATAATCCAGTATCTGCCAAGAGCATGTTGGGTCT...GGGACTGTCAGGCACAGAAGCGGCCTCCTCCCGTGCCCCAGACTGTCCGAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp CTGAGGCCGTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGAAGGTGTCTACACTaGCTTTCAAAAGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: LRPSFTDHRETEWAGGRERRCLH*LSKETG
Trigger: GCCTGTTTCTTTTGAAAGCAAGTGTAGACACCTTCG...TTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGACGGCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp AAGTCGCAGCCTTCCCCCTCCAGACACGGAAGCATGTCACACCACTaGTTGGTCTTGATGATTCTTGCTGGCCATTCCCGGTGGTGGTAC +
Preference number: 5 (lower is better)
Translates to: KSQPSPSRHGSMSHH*LVLMILAGHSRWWY
Trigger: GTACCACCACCGGGAATGGCCAGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGAGGGGGAAGGCTGCGACTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR CAA 90 bp AGAGAACGGGTGAAGTCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCATGTCACACCACTGCTaGGTCTTGATGATTCTTGCG +
Preference number: 5 (lower is better)
Translates to: RERVKSEASGELWLRRGLMSHHC*VLMILA
Trigger: CGCAAGAATCATCAAGACCAAGCAGTGGTGTGACAT...GAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGACTTCACCCGTTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GTCCTTCACGGACCACAGGGAAACGGAGTGGGCGGGCGGCAGAGAACGGGTGAAAGCATGTTCAAGATATaGTACGCTCAAGTGTTGACC +
Preference number: 5 (lower is better)
Translates to: VLHGPQGNGVGGRQRTGESMFKI*YAQVLT
Trigger: GGTCAACACTTGAGCGTACAATATCTTGAACATGCT...TTCACCCGTTCTCTGCCGCCCGCCCACTCCGTTTCCCTGTGGTCCGTGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GCGACCCCAGGGACCCTGACAGTGAGGGTGCGTCCAGGTTCAGATAGATTTTGCGGAGAAAAACCAGAATaGTCGCTTATTCCTCGGCCC +
Preference number: 5 (lower is better)
Translates to: ATPGTLTVRVRPGSDRFCGEKPE*SLIPRP
Trigger: GGGCCGAGGAATAAGCGACAATTCTGGTTTTTCTCC...GCAAAATCTATCTGAACCTGGACGCACCCTCACTGTCAGGGTCCCTGGGGTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp AAGACAGAGGACTTCTCAGAACGCGGGGACACAGGCGTGGGGAGAAGGGCCGTCCGAAGGTGTCTACACTaGCTTTCAAAAGAAACAGGC +
Preference number: 5 (lower is better)
Translates to: KTEDFSERGDTGVGRRAVRRCLH*LSKETG
Trigger: GCCTGTTTCTTTTGAAAGCAAGTGTAGACACCTTCG...GACGGCCCTTCTCCCCACGCCTGTGTCCCCGCGTTCTGAGAAGTCCTCTGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp AAGTCGCAGCCTTCCCCCTCCAGACACGGAAGCATGTCACACCACTaGTTGGTCTTGATGATTCTTGCTTCTTTGAGGAACTGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: KSQPSPSRHGSMSHH*LVLMILASLRNCAW
Trigger: CCACGCGCAGTTCCTCAAAGAAGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGAGGGGGAAGGCTGCGACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473898.1
CDS-3UTR CAA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTTTACTCGAGTTTTCTTaGCTTTCTGGAGCTAAATGG +
Preference number: 5 (lower is better)
Translates to: GEWRTVAETWALQGAKATLLEFS*LSGAKW
Trigger: CCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTAA...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp TCCGAGGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGTTACTCGAGTTTTCTTaGCTTTCTGGAGCTAAATGG +
Preference number: 5 (lower is better)
Translates to: SEASGELWLRRGLSREPRLLEFS*LSGAKW
Trigger: CCATTTAGCTCCAGAAAGCAAAGAAAACTCGAGTAA...CCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCCTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp GGCGAGTGGAGAACTGTGGCTGAGACGTGGGCTCTCCAGGGAGCCAAGGCCACTATCTTCAGTCTATGGTaGCTGGAACAGCTTCTATAT +
Preference number: 5 (lower is better)
Translates to: GEWRTVAETWALQGAKATIFSLW*LEQLLY
Trigger: ATATAGAAGCTGTTCCAGCAACCATAGACTGAAGAT...AGTGGCCTTGGCTCCCTGGAGAGCCCACGTCTCAGCCACAGTTCTCCACTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp AAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAATACAGGGACCAGCCTCAGGGGCTGTGTTaGTCAGGAGACCGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: KKHVQDIVRSSVDQYRDQPQGLC*SGDRGG
Trigger: ACCACCACGGTCTCCTGACAAACACAGCCCCTGAGG...CTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS GCA 90 bp GATTCTTGCTGGCCATTCCCGGTGGTGGTACATTTCGGGTGTTTGTaGTTTCCTGGTTTTTCCCTCTTCCTTTCAATTACTCTCTTAGGG +
Preference number: 5 (lower is better)
Translates to: DSCWPFPVVVHFGCL*FPGFSLFLSITLLG
Trigger: CCCTAAGAGAGTAATTGAAAGGAAGAGGGAAAAACCAGGAAAGCACAAACACCCGAAATGTACCACCACCGGGAATGGCCAGCAAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS-3UTR CAA 90 bp ACTGGATTATCCAACTATCAAAAATGGAGCTGTAGAAGAGGCATGTTTAACTGGGTCCAGCCTGACCGGTaGATTAACAAGTCGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TGLSNYQKWSCRRGMFNWVQPDR*INKSQP
Trigger: AGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGAC...CCAGTTAAACATGCCTCTTCTACAGCTCCATTTTTGATAGTTGGATAATCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS-3UTR CAA 90 bp AAGAAGCATGTTCAAGATATTGTACGCTCAAGTGTTGACCAATACAGGGACCAGAGACCCAACATGCTCTaGGCAGATACTGGATTATCC +
Preference number: 5 (lower is better)
Translates to: KKHVQDIVRSSVDQYRDQRPNML*ADTGLS
Trigger: GGATAATCCAGTATCTGCCAAGAGCATGTTGGGTCT...CTGGTCCCTGTATTGGTCAACACTTGAGCGTACAATATCTTGAACATGCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358295.9
ENST00000402357.6
CDS CCA 72 bp TGGGCAGGGCGGTCGCATCTTGCCGGCTGCCGGTCCTaGGCGATGGCGCCATTGAAGCCGCGGCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: WAGRSHLAGCRS*AMAPLKPRRPR
Trigger: GCGCGGGCGCCGCGGCTTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS GCA 72 bp ACACAGGCGGGCCGGGCTCTCGTGGTGCCGGCGATCTaGCCCTTTCTACACGCACAGCGGGCGGTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: TQAGRALVVPAI*PFLHAQRAVCR
Trigger: CCGGCAGACCGCCCGCTGTGCGTGTAGAAAGGGGCAGATCGCCGGCACCACGAGAGCCCGGCCCGCCTGTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 72 bp AGGACATGCTGGGCAGGGCGGTCGCATCTTGCCGGCTaGCGGTCCTGGGCGATGGCGCCATTGAAGCCGCGG +
Preference number: 6 (lower is better)
Translates to: RTCWAGRSHLAG*RSWAMAPLKPR
Trigger: CCGCGGCTTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCAGCATGTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS GCA 72 bp GCGATCTGCCCCTTTCTACACGCACAGCGGGCGGTCTaGCGGGCGATCGTCCTCCGAGGCTGGCTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: AICPFLHAQRAV*RAIVLRGWLLS
Trigger: GGACAGCAGCCAGCCTCGGAGGACGATCGCCCGGCAGACCGCCCGCTGTGCGTGTAGAAAGGGGCAGATCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 72 bp GGGCGGTCTGCCGGGCGATCGTCCTCCGAGGCTGGCTaGTGTCCCGGTCCAAGGTCACAATCTCACAGGTGC +
Preference number: 6 (lower is better)
Translates to: GRSAGRSSSEAG*CPGPRSQSHRC
Trigger: GCACCTGTGAGATTGTGACCTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGATCGCCCGGCAGACCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 72 bp TTCTTGCGTCCACACAGGCGGGCCGGGCTCTCGTGGTaGCGGCGATCTGCCCCTTTCTACACGCACAGCGGG +
Preference number: 6 (lower is better)
Translates to: FLRPHRRAGLSW*RRSAPFYTHSG
Trigger: CCCGCTGTGCGTGTAGAAAGGGGCAGATCGCCGGCACCACGAGAGCCCGGCCCGCCTGTGTGGACGCAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS CCA 72 bp CAGCGGGCGGTCTGCCGGGCGATCGTCCTCCGAGGCTaGCTGCTGTCCCGGTCCAAGGTCACAATCTCACAG +
Preference number: 6 (lower is better)
Translates to: QRAVCRAIVLRG*LLSRSKVTISQ
Trigger: CTGTGAGATTGTGACCTTGGACCGGGACAGCAGCCAGCCTCGGAGGACGATCGCCCGGCAGACCGCCCGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS TCA 72 bp TCCCGCCGGGCTGCGTGCACGTCCAGCCTGACCGGTTaGTTAACAAGTCGCAGCCTTCCCCCTCCAGACACG +
Preference number: 6 (lower is better)
Translates to: SRRAACTSSLTG*LTSRSLPPPDT
Trigger: CGTGTCTGGAGGGGGAAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS CAA 72 bp CTCCCGCCGGGCTGCGTGCACGTCCAGCCTGACCGGTaGATTAACAAGTCGCAGCCTTCCCCCTCCAGACAC +
Preference number: 6 (lower is better)
Translates to: LPPGCVHVQPDR*INKSQPSPSRH
Trigger: GTGTCTGGAGGGGGAAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS GCA 72 bp AAAGTTGAGGACATGCTGGGCAGGGCGGTCGCATCTTaGCGGCTGCCGGTCCTGGGCGATGGCGCCATTGAA +
Preference number: 6 (lower is better)
Translates to: KVEDMLGRAVAS*RLPVLGDGAIE
Trigger: TTCAATGGCGCCATCGCCCAGGACCGGCAGCCGGCAAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402357.6
CDS TCA 72 bp GAGCAGGCTGGCCAGGATCATGAACGCCCAGAAAGTTaGGGACATGCTGGGCAGGGCGGTCGCATCTTGCCG +
Preference number: 6 (lower is better)
Translates to: EQAGQDHERPES*GHAGQGGRILP
Trigger: CGGCAAGATGCGACCGCCCTGCCCAGCATGTCCTCAACTTTCTGGGCGTTCATGATCCTGGCCAGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336769.9
ENST00000402357.6
CDS CAA 90 bp GTCTTTATCCTCCCGCCGGGCTGCGTGCACGTCCAGCCTGACCGGTaGATTAACAAGTCGCAGCCTTCCCCCTCCAGACACGGAAGCATG +
Preference number: 6 (lower is better)
Translates to: VFILPPGCVHVQPDR*INKSQPSPSRHGSM
Trigger: CATGCTTCCGTGTCTGGAGGGGGAAGGCTGCGACTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS GCA 72 bp GAGGGTGACGTGGTGGTCTTTATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGACCGGTTGATTAACAAG +
Preference number: 6 (lower is better)
Translates to: EGDVVVFILPPG*VHVQPDRLINK
Trigger: CTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGACCACCACGTCACCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336769.9
CDS GCA 72 bp CAGGAGACCGTGGTGGTCTTTATCCTCCCGCCGGGCTaGGTGCACGTCCAGCCTGACCGGTTGATTAACAAG +
Preference number: 6 (lower is better)
Translates to: QETVVVFILPPG*VHVQPDRLINK
Trigger: CTTGTTAATCAACCGGTCAGGCTGGACGTGCACGCAGCCCGGCGGGAGGATAAAGACCACCACGGTCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358295.9
ENST00000402357.6
ENST00000406880.1
ENST00000473898.1
CDS CCA 72 bp TCTGTCTGCAGCTGGGGATTCCTGGCGGTGCCCTCTTaGGAGGTTTGGAGGGTGACGTGGTGGTCTTTATCC +
Preference number: 6 (lower is better)
Translates to: SVCSWGFLAVPS*EVWRVTWWSLS
Trigger: GGATAAAGACCACCACGTCACCCTCCAAACCTCCCAAGAGGGCACCGCCAGGAATCCCCAGCTGCAGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336769.9
CDS CAA 72 bp CTCTGTCTGCAGCTGGGGATTCCTGGCGGTGCCCTCTaGGGAGGTTTGGAGGGTGACGTGGTGGTCTTTATC +
Preference number: 6 (lower is better)
Translates to: LCLQLGIPGGAL*GGLEGDVVVFI
Trigger: GATAAAGACCACCACGTCACCCTCCAAACCTCCCAAGAGGGCACCGCCAGGAATCCCCAGCTGCAGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336769.9
CDS CAA 72 bp TCCAGACACGGAAGCATGTCACACCACTGCTTGGTCTaGATGATTCTTGCGTCCACACAGGCGGGCCGGGCT +
Preference number: 6 (lower is better)
Translates to: SRHGSMSHHCLV*MILASTQAGRA
Trigger: AGCCCGGCCCGCCTGTGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS CAA 72 bp TCCCCCTCCAGACACGGAAGCATGTCACACCACTGCTaGGTCTTGATGATTCTTGCGTCCACACAGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SPSRHGSMSHHC*VLMILASTQAG
Trigger: GCCCGCCTGTGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS GCA 72 bp CCTTCCCCCTCCAGACACGGAAGCATGTCACACCACTaGTTGGTCTTGATGATTCTTGCGTCCACACAGGCG +
Preference number: 6 (lower is better)
Translates to: PSPSRHGSMSHH*LVLMILASTQA
Trigger: CGCCTGTGTGGACGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGAGGGGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336769.9
ENST00000358295.9
ENST00000402357.6
CDS CAA 72 bp TCCAGACACGGAAGCATGTCACACCACTGCTTGGTCTaGATGATTCTTGCTGGCCATTCCCGGTGGTGGTAC +
Preference number: 6 (lower is better)
Translates to: SRHGSMSHHCLV*MILAGHSRWWY
Trigger: GTACCACCACCGGGAATGGCCAGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1
CDS GCA 72 bp TGCTTGGTCTTGATGATTCTTGCTTCTTTGAGGAACTaGGCGTGGATCACTAGGACGAGGAAGCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: CLVLMILASLRN*AWITRTRKQQS
Trigger: GCTCTGCTGCTTCCTCGTCCTAGTGATCCACGCGCAGTTCCTCAAAGAAGCAAGAATCATCAAGACCAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473898.1
CDS CAA 72 bp TCCAGACACGGAAGCATGTCACACCACTGCTTGGTCTaGATGATTCTTGCTTCTTTGAGGAACTGCGCGTGG +
Preference number: 6 (lower is better)
Translates to: SRHGSMSHHCLV*MILASLRNCAW
Trigger: CCACGCGCAGTTCCTCAAAGAAGCAAGAATCATCAAGACCAAGCAGTGGTGTGACATGCTTCCGTGTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473898.1
CDS CCA 72 bp TTGGTCTTGATGATTCTTGCTGGCCATTCCCGGTGGTaGTACATTTCGGGTGTTTGTGCTTTCCTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: LVLMILAGHSRW*YISGVCAFLVF
Trigger: AAAAACCAGGAAAGCACAAACACCCGAAATGTACCACCACCGGGAATGGCCAGCAAGAATCATCAAGACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406880.1