Pregenerated sensors for TAFA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000163377Ensembl transcript IDs: ENST00000295569.12, ENST00000495737.1, ENST00000634242.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCATCTGTTTCATACGTTTCCGCATGACAGCATTTGAGAATATGTaGAGACATGTCTGCTGCAAAATCATTAAGCCAATCAGGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: FICFIRFRMTAFENM*RHVCCKIIKPIRTQ Trigger: CTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCGGAAACGTATGAAACAGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR TCA 90 bp | AAAATCTGGGTCAGTCATTCTTCATCTGTTTCATACGTTTCCGCATaGCAGCATTTGAGAATATGTGGAGACATGTCTGCTGCAAAATCA | + |
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Preference number: 1 (lower is better) Translates to: KIWVSHSSSVSYVSA*QHLRICGDMSAAKS Trigger: TGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCGGAAACGTATGAAACAGATGAAGAATGACTGACCCAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR GCA 90 bp | ATACGTTTCCGCATGACAGCATTTGAGAATATGTGGAGACATGTCTaGTGCAAAATCATTAAGCCAATCAGGACTCAGATTTTAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: IRFRMTAFENMWRHV*CKIIKPIRTQILKK Trigger: TTTCTTTAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCGGAAACGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTGCTGGGCCAGTTAAGTaGATGCCACCTCTCACAGCT | + |
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Preference number: 2 (lower is better) Translates to: FWRYAPWESREDVKWVVAAGPVK*MPPLTA Trigger: AGCTGTGAGAGGTGGCATTCACTTAACTGGCCCAGC...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR CAA 90 bp | TTGAAGACTCTGATTTGCTCTTCTCGGATTTTGGAGGTATGCTCCTaGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: LKTLICSSRILEVCS*GIQRGCQMGGGLWL Trigger: TAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATCTGCAAAGGGGCCATaGTGGGAATCCAAGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LGNPERMSNGWWLVVIIQSAKGP*WESKQK Trigger: CTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGA...TTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR CAA 90 bp | AGAATGAACATGCCCTTAGTGGTGATCCATTTTGAAGACTCTGATTaGCTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: RMNMPLVVIHFEDSD*LFSDFGGMLLGNPE Trigger: CTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAAATGGATCACCACTAAGGGCATGTTCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR GCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACCGGATTTTGGAGGTATaGTCCTTGGGAATCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LPVNQLISSSNFLHQLIYRILEV*SLGIQR Trigger: TCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCG...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR CCA 90 bp | GCACTGAAAGACTCCTGTCTCGGAGTTAAAATCTTTTCATATAATTGGCATAAAAGGATGTCAAATGGGTaGTGGCTTGTGGTTATAATT | + |
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Preference number: 2 (lower is better) Translates to: ALKDSCLGVKIFSYNWHKRMSNG*WLVVII Trigger: AATTATAACCACAAGCCACCACCCATTTGACATCCT...TTTATGCCAATTATATGAAAAGATTTTAACTCCGAGACAGGAGTCTTTCAGTGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR CCA 90 bp | GCACTGAAAGACTCCTGTCTCGGAGTTAAAATCTTTTCATATAATTGGCATAAAATGTCAAATGGGTGGTaGCTTGTGGTTATAATTCAA | + |
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Preference number: 2 (lower is better) Translates to: ALKDSCLGVKIFSYNWHKMSNGW*LVVIIQ Trigger: TTGAATTATAACCACAAGCCACCACCCATTTGACAT...TTTATGCCAATTATATGAAAAGATTTTAACTCCGAGACAGGAGTCTTTCAGTGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR GCA 72 bp | ATCACGAAGCAGAGAGGGCTGGGCCAGTTAAGTGAATaGCACCTCTCACAGCTCACATATACAAATATGAAG | + |
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Preference number: 3 (lower is better) Translates to: ITKQRGLGQLSE*HLSQLTYTNMK Trigger: CTTCATATTTGTATATGTGAGCTGTGAGAGGTGGCATTCACTTAACTGGCCCAGCCCTCTCTGCTTCGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR TCA 72 bp | GTCAGTCATTCTTCATCTGTTTCATACGTTTCCGCATaGCAGCATTTGAGAATATGTGGAGACATGTCTGCT | + |
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Preference number: 3 (lower is better) Translates to: VSHSSSVSYVSA*QHLRICGDMSA Trigger: AGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCGGAAACGTATGAAACAGATGAAGAATGACTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR GCA 72 bp | CGCATGACAGCATTTGAGAATATGTGGAGACATGTCTaGTGCAAAATCATTAAGCCAATCAGGACTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: RMTAFENMWRHV*CKIIKPIRTQI Trigger: AATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR CAA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACTTGGAGGTATGCTCCTaGGGAATCCAGAGAGGATGT | + |
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Preference number: 3 (lower is better) Translates to: LPVNQLISSSNFLHQLIYLEVCS*GIQRGC Trigger: ACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAA...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR TCA 72 bp | CTTCATCTGTTTCATACGTTTCCGCATGACAGCATTTaGGAATATGTGGAGACATGTCTGCTGCAAAATCAT | + |
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Preference number: 3 (lower is better) Translates to: LHLFHTFPHDSI*EYVETCLLQNH Trigger: ATGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCATGCGGAAACGTATGAAACAGATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR CAA 90 bp | GCACTGAAAGACTCCTGTCTCGGAGTTAAAATCTTTTCATATAATTGGCATAAACAGAATGAGGACCCTTaGGAACATACATCCAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ALKDSCLGVKIFSYNWHKQNEDP*EHTSKF Trigger: GAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTG...TTTATGCCAATTATATGAAAAGATTTTAACTCCGAGACAGGAGTCTTTCAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR GCA 72 bp | ATGACAGCATTTGAGAATATGTGGAGACATGTCTGCTaGAAAATCATTAAGCCAATCAGGACTCAGATTTTA | + |
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Preference number: 3 (lower is better) Translates to: MTAFENMWRHVC*KIIKPIRTQIL Trigger: TAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCACATATTCTCAAATGCTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR-3UTR CAA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACTTTGAAGACTCTGATTaGCTCTTCTCGGATTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LPVNQLISSSNFLHQLIYFEDSD*LFSDFG Trigger: TCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAA...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTAGGACTCCCGATGTTTaGCCGCAGCCGCGCGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: FLQRGHDGNPSKRAPPPARTPDV*PQPRAQ Trigger: CTGCGCGCGCGGCTGCGGGCAAACATCGGGAGTCCT...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTCCGGAACTAGGTACTaGTCGCCGCACCGGAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: FWRYAPWESREDVKWVVASGTRY*SPHRSP Trigger: CGGGCTCCGGTGCGGCGATCAGTACCTAGTTCCGGA...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTCCGGAGGTGCTGGCTTaGGGCGGACATCAGCTTACA | + |
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Preference number: 4 (lower is better) Translates to: FLQRGHDGNPSKRAPPPAPEVLA*GGHQLT Trigger: TGTAAGCTGATGTCCGCCTCAAGCCAGCACCTCCGG...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | GCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATCTATGCGGTTCTTATTaGAGCACCTGTGCACGGCGA | + |
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Preference number: 4 (lower is better) Translates to: AMMGIQAKELRLLLPLQDLCGSY*STCARR Trigger: TCGCCGTGCACAGGTGCTGCAATAAGAACCGCATAG...ATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | GGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGAGCTCCGCCTCCTGCTaGCCCTCCAGGATTGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GGMLLGNPERMSNGWWLVSSASC*PSRIEA Trigger: TGCTTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCT...CACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATTGAAGCAGCACTTGACCGTTTGTaGCCGCTCTTCTATGCGGTT | + |
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Preference number: 4 (lower is better) Translates to: WESKQKSSASCCPSRIEAALDRL*PLFYAV Trigger: AACCGCATAGAAGAGCGGTCACAAACGGTCAAGTGC...TGCTTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTTCAACACAAGAAGGTTaGGCCCGAGTTGTGCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: FLQRGHDGNPSKRAPPPASTQEG*ARVVPA Trigger: GGCGGGCACAACTCGGGCTCAACCTTCTTGTGTTGA...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGGAGAAGCGGCAGCTaGGGCAGGACTCCCGATGTT | + |
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Preference number: 4 (lower is better) Translates to: FWRYAPWESREDVKWVVAWRSGS*GRTPDV Trigger: AACATCGGGAGTCCTGCCTCAGCTGCCGCTTCTCCA...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATTGAAGCAGCTACAGGACCAACCTaGGTAATCTGGCAGCACTTT | + |
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Preference number: 4 (lower is better) Translates to: WESKQKSSASCCPSRIEAATGPT*VIWQHF Trigger: AAAGTGCTGCCAGATTACTCAGGTTGGTCCTGTAGC...TGCTTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | GGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGCTGGGCCAGTTAAGTaGATGCCACCTCTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGMLLGNPERMSNGWWLVAGPVK*MPPLTA Trigger: AGCTGTGAGAGGTGGCATTCACTTAACTGGCCCAGC...CACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGGTTGAGCCCGAGTTGTaGCCGCCACCTGTCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: WESREDVKWVVACGYNSMVEPEL*PPPVPG Trigger: TCCCGGGACAGGTGGCGGGCACAACTCGGGCTCAAC...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | CTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATTGTCCCCGGAGGTGCTaGCTTGAGGCGGACATCAGC | + |
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Preference number: 4 (lower is better) Translates to: LFSDFGGMLLGNPERMSNCPRRC*LEADIS Trigger: GCTGATGTCCGCCTCAAGCCAGCACCTCCGGGGACA...ATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | CTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGAAGCCCGAAGCTCCTaGGGGAGAAGCCTGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: LFSDFGGMLLGNPERMSNEARSS*GRSLKL Trigger: CAGCTTCAGGCTTCTCCCGCAGGAGCTTCGGGCTTC...ATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTCACAGGTCCCTTGCTTaGTTTGGTGGTGACCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: FWRYAPWESREDVKWVVAHRSLA*FGGDLH Trigger: ATGCAGGTCACCACCAAATCAAGCAAGGGACCTGTG...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCTAGAAAGAGCCAGTaGGACAGCAACACTGACTTA | + |
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Preference number: 4 (lower is better) Translates to: FLQRGHDGNPSKRAPPPAARKSQ*DSNTDL Trigger: TAAGTCAGTGTTGCTGTCGCACTGGCTCTTTCTAGC...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | GGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGCGGATTTTGGAGGTATaGTCCTTGGGAATCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: GGMLLGNPERMSNGWWLVRILEV*SLGIQR Trigger: TCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCG...CACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | GGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATTGAAGCACAGGATGTCAAATGGGTaGTGGCTTGTGGTTATAATT | + |
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Preference number: 4 (lower is better) Translates to: GNPSKRAPPPAAPPGLKHRMSNG*WLVVII Trigger: AATTATAACCACAAGCCACCACCCATTTGACATCCT...GTGCTTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTCCGCATGACAGCATTTaGGAATATGTGGAGACATGT | + |
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Preference number: 4 (lower is better) Translates to: FLQRGHDGNPSKRAPPPAPHDSI*EYVETC Trigger: ACATGTCTCCACATATTCTCAAATGCTGTCATGCGG...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGAAGAGCTCCGCCTCCTaGTGCCCCTCCAGGATTGAA | + |
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Preference number: 4 (lower is better) Translates to: WESREDVKWVVACGYNSMKSSAS*CPSRIE Trigger: TTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTT...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTGGCCAGTTAAGTGAATaGCACCTCTCACAGCTCACA | + |
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Preference number: 4 (lower is better) Translates to: FWRYAPWESREDVKWVVAGQLSE*HLSQLT Trigger: TGTGAGCTGTGAGAGGTGGCATTCACTTAACTGGCC...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATTGAAGCATTGAAGACTCTGATTTaGTCTTCTCGGATTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: WESKQKSSASCCPSRIEALKTLI*SSRILE Trigger: CTCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAA...TGCTTCAATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR CAA 72 bp | CTGATTTGCTCTTCTCGGATTTTGGAGGTATGCTCCTaGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LICSSRILEVCS*GIQRGCQMGGG Trigger: GCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCAAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGAGACATGTCTGCTGCAAAATCATTAAGCCAATCAGGACTCAGATTTTAAAGGCGGCCCATCACCTCTaGAGCCTCGCCAGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: WRHVCCKIIKPIRTQILKAAHHL*SLARRR Trigger: TCTTCTCCTGGCGAGGCTGCAGAGGTGATGGGCCGC...CTTTAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | CCCTTAGTGGTGATCCATTTTGAAGACTCTGATTTGCTCTTCTCGGATTTTGGAGATTTGGTGGTGACCTaGATGTCCCCGGAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PLVVIHFEDSDLLFSDFGDLVVT*MSPEVL Trigger: CAGCACCTCCGGGGACATGCAGGTCACCACCAAATC...TCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAAATGGATCACCACTAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | GGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGAGAATGAGGACCCTTTaGAACATACATCCAAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGMLLGNPERMSNGWWLVRMRTL*NIHPSS Trigger: AGAACTTGGATGTATGTTCCAAAGGGTCCTCATTCT...CACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACGCATGTCCCCGGAGGTaGTGGCTTGAGGCGGACATC | + |
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Preference number: 4 (lower is better) Translates to: LPVNQLISSSNFLHQLIYACPRR*WLEADI Trigger: GATGTCCGCCTCAAGCCAGCACCTCCGGGGACATGC...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGGTGACCGCTCTTCTATaGGGTTCTTATTGCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: WESREDVKWVVACGYNSMVTALL*GSYCST Trigger: GGTGCTGCAATAAGAACCGCATAGAAGAGCGGTCAC...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | CTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATCTAAAAATTCAGCACTaGAAGACTCCTGTCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: LFSDFGGMLLGNPERMSNLKIQH*KTPVSE Trigger: CTCCGAGACAGGAGTCTTTCAGTGCTGAATTTTTAG...ATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR CAA 72 bp | ATGCCCTTAGTGGTGATCCATTTTGAAGACTCTGATTaGCTCTTCTCGGATTTTGGAGGTATGCTCCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: MPLVVIHFEDSD*LFSDFGGMLLG Trigger: CCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAAATGGATCACCACTAAGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTAAAGCAGAAAGAAAGTaGAGAATGAACATGCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: FWRYAPWESREDVKWVVAKAERK*RMNMPL Trigger: TAAGGGCATGTTCATTCTTCACTTTCTTTCTGCTTT...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | ATGCCACCTCTCACAGCTCACATATACAAATATGAAGTTGCTGAAATCCTAGACTGGAGGTATGCTCCTTaGGAATCCAGAGAGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MPPLTAHIYKYEVAEILDWRYAP*ESREDV Trigger: GACATCCTCTCTGGATTCCCAAGGAGCATACCTCCA...GTCTAGGATTTCAGCAACTTCATATTTGTATATGTGAGCTGTGAGAGGTGGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| 3UTR CAA 72 bp | TCCATTTTGAAGACTCTGATTTGCTCTTCTCGGATTTaGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGT | + |
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Preference number: 4 (lower is better) Translates to: SILKTLICSSRI*EVCSLGIQRGC Trigger: ACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TCAAAAGAGGAACAGAATGAGGACCCTTTGGAACATACATCCAAGTTCTTTTGTGTGCGACAGCAACACTaGCTTAGCACAGACTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKEEQNEDPLEHTSKFFCVRQQH*LSTDSH Trigger: ATGAGAGTCTGTGCTAAGTCAGTGTTGCTGTCGCAC...ACAAAAGAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTGTTCCTCTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | CTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAAGGATATATTTCAGAGTaGCTCCAAATTCCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGNPERMSNGWWLVVIIQGYISE*LQIPIC Trigger: ACAGATGGGAATTTGGAGTCACTCTGAAATATATCC...TTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | CCCTTAGTGGTGATCCATTTTGAAGACTCTGATTTGCTCTTCTCGGATTTTGGAAAAAGAGGAACAGAATaGGGACCCTTTGGAACATAC | + |
|
Preference number: 4 (lower is better) Translates to: PLVVIHFEDSDLLFSDFGKRGTE*GPFGTY Trigger: GTATGTTCCAAAGGGTCCTCATTCTGTTCCTCTTTT...TCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAAATGGATCACCACTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR GCA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGATGTGGAGACATGTCTaGTGCAAAATCATTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WESREDVKWVVACGYNSMMWRHV*CKIIKP Trigger: TGGCTTAATGATTTTGCAGCAGACATGTCTCCACAT...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | TGGAGACATGTCTGCTGCAAAATCATTAAGCCAATCAGGACTCAGATTTTAAAGACAGACTCTCATCCTTaGGGACCTCATAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRHVCCKIIKPIRTQILKTDSHP*GPHKMW Trigger: CCACATCTTATGAGGTCCCCAAGGATGAGAGTCTGT...CTTTAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | AGGAACAGAATGAGGACCCTTTGGAACATACATCCAAGTTCTTTTGTAAAAGCAGCTCTTCTCGGATTTTaGAGGTATGCTCCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RNRMRTLWNIHPSSFVKAALLGF*RYAPWE Trigger: TTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGC...TGCTTTTACAAAAGAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGGCATTTGAGAATATGTaGAGACATGTCTGCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WESREDVKWVVACGYNSMAFENM*RHVCCK Trigger: TTTGCAGCAGACATGTCTCCACATATTCTCAAATGC...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACTCTGCAAAGGGGCCATaGTGGGAATCCAAGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVNQLISSSNFLHQLIYSAKGP*WESKQK Trigger: CTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGA...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | CTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATATTTCTGAATCACAATaGAAGCTTCAACACAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFSDFGGMLLGNPERMSNISESQ*KLQHKK Trigger: CTTCTTGTGTTGAAGCTTCCATTGTGATTCAGAAAT...ATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACAGAGAGGATGTCAAATaGGTGGTGGCTTGTGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LPVNQLISSSNFLHQLIYREDVK*VVACGY Trigger: ATAACCACAAGCCACCACCCATTTGACATCCTCTCT...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR TCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACTCATACGTTTCCGCATaGCAGCATTTGAGAATATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVNQLISSSNFLHQLIYSYVSA*QHLRIC Trigger: ACATATTCTCAAATGCTGTCATGCGGAAACGTATGA...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CCA 90 bp | TTACCAGTTAATCAGTTGATCTCTAGCAGTAATTTTCTTCACCAGCTAATCTACATGTCAAATGGGTGGTaGCTTGTGGTTATAATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPVNQLISSSNFLHQLIYMSNGW*LVVIIQ Trigger: TTGAATTATAACCACAAGCCACCACCCATTTGACAT...GTAGATTAGCTGGTGAAGAAAATTACTGCTAGAGATCAACTGATTAACTGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTCAGGACTCCCGATGTTaGCCCGCAGCCGCGCGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLQRGHDGNPSKRAPPPAQDSRC*PAAARA Trigger: TGCGCGCGCGGCTGCGGGCAAACATCGGGAGTCCTG...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TTTCTGCAAAGGGGCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTCCCGGAGGTGCTGGCTaGAGGCGGACATCAGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: FLQRGHDGNPSKRAPPPAPGGAG*RRTSAY Trigger: GTAAGCTGATGTCCGCCTCAAGCCAGCACCTCCGGG...AGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGCCCCTTTGCAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTAAGGTTGAGCCCGAGTaGTGCCCGCCACCTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: FWRYAPWESREDVKWVVAKVEPE*CPPPVP Trigger: CGGGACAGGTGGCGGGCACAACTCGGGCTCAACCTT...AGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | GCCATGATGGGAATCCAAGCAAAAGAGCTCCGCCTCCTGCTGCCCCTCCAGGATGTTACCTTCGTAGTTTaGACTTTATTGCCACTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AMMGIQAKELRLLLPLQDVTFVV*TLLPLL Trigger: TAGCAGTGGCAATAAAGTCAAAACTACGAAGGTAAC...ATCCTGGAGGGGCAGCAGGAGGCGGAGCTCTTTTGCTTGGATTCCCATCATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | CTCTTCTCGGATTTTGGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATTTCAACACAAGAAGGTaGAGCCCGAGTTGTGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LFSDFGGMLLGNPERMSNFNTRR*SPSCAR Trigger: GCGGGCACAACTCGGGCTCAACCTTCTTGTGTTGAA...ATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAAAATCCGAGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | GGAGGTATGCTCCTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTAGTTTTGACTTTATaGCCACTGCTACAGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GGMLLGNPERMSNGWWLVVVLTL*PLLQDQ Trigger: TTGGTCCTGTAGCAGTGGCAATAAAGTCAAAACTAC...CACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAGGAGCATACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS GCA 90 bp | CACTCTATACCGTTAAGCCTATGTAGTGGGTATGTTGTGGCCCACTaGACTGGATACCCAAGGCAATGGGTACAAGTCCTCTTCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: HSIPLSLCSGYVVAH*TGYPRQWVQVLFLK Trigger: TTTTAAGAAGAGGACTTGTACCCATTGCCTTGGGTATCCAGTGCAGTGGGCCACAACATACCCACTACATAGGCTTAACGGTATAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634242.1 |
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| CDS-3UTR CAA 90 bp | ATGCCACCTCTCACAGCTCACATATACAAATATGAAGTTGCTGAAATCCTAGACGGTCCCTTGCTTGATTaGGTGGTGACCTGCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MPPLTAHIYKYEVAEILDGPLLD*VVTCMS Trigger: GGACATGCAGGTCACCACCAAATCAAGCAAGGGACC...GTCTAGGATTTCAGCAACTTCATATTTGTATATGTGAGCTGTGAGAGGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | ATGCCACCTCTCACAGCTCACATATACAAATATGAAGTTGCTGAAATCCTAGACTCTATGCGGTTCTTATaGCAGCACCTGTGCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: MPPLTAHIYKYEVAEILDSMRFL*QHLCTA Trigger: CGCCGTGCACAGGTGCTGCAATAAGAACCGCATAGA...GTCTAGGATTTCAGCAACTTCATATTTGTATATGTGAGCTGTGAGAGGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TGGAGACATGTCTGCTGCAAAATCATTAAGCCAATCAGGACTCAGATTTTAAAGCACCTCACAGGTCCCTaGCTTGATTTGGTGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: WRHVCCKIIKPIRTQILKHLTGP*LDLVVT Trigger: GGTCACCACCAAATCAAGCAAGGGACCTGTGAGGTG...CTTTAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | CTTGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAACAGAATGAGGACCCTTaGGAACATACATCCAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGNPERMSNGWWLVVIIQQNEDP*EHTSKF Trigger: GAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTG...TTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATGAGGACCCTTTGGAACATACATCCAAGTTCTTTTGTAAAAGCATTGGAGGTATGCTCCTaGGGAATCCAGAGAGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: RNRMRTLWNIHPSSFVKALEVCS*GIQRGC Trigger: ACATCCTCTCTGGATTCCCAAGGAGCATACCTCCAA...TGCTTTTACAAAAGAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | AGGAACAGAATGAGGACCCTTTGGAACATACATCCAAGTTCTTTTGTAAAAGCATGCTCTTCTCGGATTTaGGAGGTATGCTCCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RNRMRTLWNIHPSSFVKACSSRI*EVCSLG Trigger: TCCCAAGGAGCATACCTCCAAAATCCGAGAAGAGCA...TGCTTTTACAAAAGAACTTGGATGTATGTTCCAAAGGGTCCTCATTCTGTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TGGGAATCCAGAGAGGATGTCAAATGGGTGGTGGCTTGTGGTTATAATTCAATGCCAAATTCCCATCTGTaGCTAGAACCAATCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WESREDVKWVVACGYNSMPNSHL*LEPIIS Trigger: AGAAATGATTGGTTCTAGCAACAGATGGGAATTTGG...CATTGAATTATAACCACAAGCCACCACCCATTTGACATCCTCTCTGGATTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS-3UTR CAA 90 bp | TGGAGACATGTCTGCTGCAAAATCATTAAGCCAATCAGGACTCAGATTTTAAAGTTTGAAGACTCTGATTaGCTCTTCTCGGATTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRHVCCKIIKPIRTQILKFEDSD*LFSDFG Trigger: TCCAAAATCCGAGAAGAGCAAATCAGAGTCTTCAAA...CTTTAAAATCTGAGTCCTGATTGGCTTAATGATTTTGCAGCAGACATGTCTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS TCA 90 bp | AGGAAGATTGTTTCCAATCTTCCCTTCTTGCAAGGCAGAGAAAGATaGAAGCGTCTCGATCCTGAAATATTTATATCTAAGACTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RKIVSNLPFLQGRER*KRLDPEIFISKTGN Trigger: ATTTCCAGTCTTAGATATAAATATTTCAGGATCGAGACGCTTTCATCTTTCTCTGCCTTGCAAGAAGGGAAGATTGGAAACAATCTTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634242.1 |
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| CDS CAA 72 bp | CTGGAGAAGCGGCAGCTGAGGCAGGACTCCCGATGTTaGCCCGCAGCCGCGCGCGCAGTCGGTGCGCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LEKRQLRQDSRC*PAAARAVGAPR Trigger: ACGGGGCGCACCGACTGCGCGCGCGGCTGCGGGCAAACATCGGGAGTCCTGCCTCAGCTGCCGCTTCTCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295569.12 ENST00000495737.1 |
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| CDS TCA 72 bp | CATCCAAGTCGGACCGGCGCGTCCGGAACTAGGTACTaGTCGCCGCACCGGAGCCCGAGGACGCTCACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSRTGASGTRY*SPHRSPRTLTV Trigger: CACGGTGAGCGTCCTCGGGCTCCGGTGCGGCGATCAGTACCTAGTTCCGGACGCGCCGGTCCGACTTGGATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS TCA 72 bp | ACCTGTGCACGGCGACCACCTCACAGGTCCCTTGCTTaGTTTGGTGGTGACCTGCATGTCCCCGGAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TCARRPPHRSLA*FGGDLHVPGGA Trigger: AGCACCTCCGGGGACATGCAGGTCACCACCAAATCAAGCAAGGGACCTGTGAGGTGGTCGCCGTGCACAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000295569.12 ENST00000495737.1 |
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| CDS CAA 72 bp | CAATGGAAGCTTCAACACAAGAAGGTTGAGCCCGAGTaGTGCCCGCCACCTGTCCCGGGAAGCAAGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: QWKLQHKKVEPE*CPPPVPGSKST Trigger: AGTGCTCTTGCTTCCCGGGACAGGTGGCGGGCACAACTCGGGCTCAACCTTCTTGTGTTGAAGCTTCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295569.12 |
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| CDS TCA 72 bp | CTCAGAAGACCTGGGTTCCAATGGCAGTTCAAGTCGTaGGCTGCTGGTATTCAATTTACAGTGCTGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRPGFQWQFKS*AAGIQFTVLFV Trigger: AACAAACAGCACTGTAAATTGAATACCAGCAGCTCACGACTTGAACTGCCATTGGAACCCAGGTCTTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634242.1 |
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| CDS CCA 72 bp | TATGTTGTGGCCCACTGCACTGGATACCCAAGGCAATaGGTACAAGTCCTCTTCTTAAAAATATCAACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: YVVAHCTGYPRQ*VQVLFLKISTS Trigger: CGAAGTTGATATTTTTAAGAAGAGGACTTGTACCCATTGCCTTGGGTATCCAGTGCAGTGGGCCACAACATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000634242.1 |
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