RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAFA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198673

Ensembl transcript IDs: ENST00000416284.7, ENST00000416284.8, ENST00000500610.1, ENST00000547919.1, ENST00000547941.1, ENST00000548780.1, ENST00000549379.5, ENST00000549456.5, ENST00000549958.5, ENST00000550003.1, ENST00000550396.1, ENST00000551449.1, ENST00000551619.5, ENST00000552075.5

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTCATCAGCCTTaGGGATCACTTGATTTCTCCTGGGTTAATGGGTTACCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: GVELSFYAHVQCHQP*GSLDFSWVNGLPAA
Trigger: AGCAGCAGGTAACCCATTAACCCAGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAACTTAACTCAACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549379.5
3UTR TCA 90 bp GCCTCTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTaGGTTAAGTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGG +
Preference number: 1 (lower is better)
Translates to: ASFKWYKNLQDHLRS*VKFLCACSMSSALR
Trigger: CCTCAAGGCTGATGACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTAGGACAGAAGGACAGTaGACTTGGGATACAGCTTGC +
Preference number: 2 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSRTEGQ*TWDTAC
Trigger: GCAAGCTGTATCCCAAGTGCACTGTCCTTCTGTCCT...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGGGCTACCCATTAACTTaGCTGCTCACTGCTGATTTC +
Preference number: 2 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTGYPLT*LLTADF
Trigger: GAAATCAGCAGTGAGCAGTCAAGTTAATGGGTAGCC...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp AAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATCCAGGATCACCTCAGGAGTTaGGTTAAGTTTCTATGCGCA +
Preference number: 2 (lower is better)
Translates to: KPCVVPLANEHRTQEHIQDHLRS*VKFLCA
Trigger: TGCGCATAGAAACTTAACTCAACTCCTGAGGTGATC...CTGGATGTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CCA 90 bp TCATTAAAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACGAAGGACAGTGCACTTaGGATACAGCTTGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: SLKPCVVPLANEHRTQEHEGQCT*DTACRN
Trigger: GTTTCTGCAAGCTGTATCCCAAGTGCACTGTCCTTC...GTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTTTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTGATCACCTCAGGAGTTaGGTTAAGTTTCTATGCGCA +
Preference number: 2 (lower is better)
Translates to: VSMRMFNVISLEDHLISPDHLRS*VKFLCA
Trigger: TGCGCATAGAAACTTAACTCAACTCCTGAGGTGATC...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGCATTCAAACAGTCATTaGGATCAAGCAAAAGAAAGT +
Preference number: 2 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTHSNSH*DQAKES
Trigger: ACTTTCTTTTGCTTGATCCCAATGACTGTTTGAATG...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATACAGTTCAAATCTGCTaGAATCTTCATGACATGCAA +
Preference number: 2 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYTVQIC*NLHDMQ
Trigger: TTGCATGTCATGAAGATTTCAGCAGATTTGAACTGT...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAGGCTACCCATTAACTTaGCTGCTCACTGCTGATTTC +
Preference number: 2 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVGYPLT*LLTADF
Trigger: GAAATCAGCAGTGAGCAGTCAAGTTAATGGGTAGCC...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAGAAGGACAGTGCACTTaGGATACAGCTTGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVEGQCT*DTACRN
Trigger: GTTTCTGCAAGCTGTATCCCAAGTGCACTGTCCTTC...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAACAGAAAGGGAGAGTaGTCTAGAGGTACAAAGTAT +
Preference number: 2 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYNRKGE*SRGTKY
Trigger: ATACTTTGTACCTCTAGAGCACTCTCCCTTTCTGTT...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTGAAGGACAGTGCACTTaGGATACAGCTTGCAGAAAC +
Preference number: 2 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSEGQCT*DTACRN
Trigger: GTTTCTGCAAGCTGTATCCCAAGTGCACTGTCCTTC...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR CAA 90 bp CCAGTTCTAACTACTACCTATTTGACAAAGAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATATGTCAGCTTGTCTATACATTCTTAT +
Preference number: 2 (lower is better)
Translates to: PVLTTTYLTKSFSRV*LALGKYVSLSIHSY
Trigger: ATAAGAATGTATAGACAAGCTGACATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCTCTTTGTCAAATAGGTAGTAGTTAGAACTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTATTGGAAATAGACTATTaGGCGCCTCTTTCAAGTGGT +
Preference number: 2 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVLEIDY*APLSSG
Trigger: ACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAA...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR TCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTCTGCTGAAATCTTCATaGCATGCAAGTTCATGTCTG +
Preference number: 2 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSLLKSS*HASSCL
Trigger: CAGACATGAACTTGCATGTCATGAAGATTTCAGCAG...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACGAAATCTTCATGACATaGAAGTTCATGTCTGACTTT +
Preference number: 2 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYEIFMT*KFMSDF
Trigger: AAAGTCAGACATGAACTTGCATGTCATGAAGATTTC...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTAACAGAAAGGGAGAGTaGTCTAGAGGTACAAAGTAT +
Preference number: 2 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSNRKGE*SRGTKY
Trigger: ATACTTTGTACCTCTAGAGCACTCTCCCTTTCTGTT...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAAGAAATCCTTCTCCTTaGATTCCTTCAAACTATAGG +
Preference number: 2 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVRNPSP*IPSNYR
Trigger: CCTATAGTTTGAAGGAATGCAAGGAGAAGGATTTCT...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR CAA 90 bp GTATTATATAATGAAAATGGCAATCCAGTTCTAACTACTACCTATTaGACAAAGAGCTTCAGCAGGGTGTTGTTAGCCTTAGGGAAATAT +
Preference number: 2 (lower is better)
Translates to: VLYNENGNPVLTTTY*TKSFSRVLLALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCTCTTTGTCAAATAGGTAGTAGTTAGAACTGGATTGCCATTTTCATTATATAATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR GCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAGAAATCTTCATGACATaGAAGTTCATGTCTGACTTT +
Preference number: 2 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVEIFMT*KFMSDF
Trigger: AAAGTCAGACATGAACTTGCATGTCATGAAGATTTC...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CAA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATAT +
Preference number: 3 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTSFSRV*LALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCT...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CAA 90 bp AAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATCCAGTGGAGAAATCAAAAATaGTCATCAGGCACAGCAGAA +
Preference number: 3 (lower is better)
Translates to: KPCVVPLANEHRTQEHIQWRNQK*SSGTAE
Trigger: TTCTGCTGTGCCTGATGACAATTTTTGATTTCTCCA...CTGGATGTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549379.5
3UTR-3UTR CAA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 3 (lower is better)
Translates to: VSMRMFNVISLEDHLISPLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CAA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTACTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 3 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CAA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATAT +
Preference number: 3 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSSFSRV*LALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCT...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR-3UTR CAA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACGGCCTAACAAATTGTTaGAATAGGAAAACTGTAAGC +
Preference number: 3 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYGLTNC*NRKTVS
Trigger: GCTTACAGTTTTCCTATTCAAACAATTTGTTAGGCC...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
3UTR TCA 72 bp AAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTaGGTTAAGTTTCTATGCGCATGTTCAATGTCATCA +
Preference number: 3 (lower is better)
Translates to: KWYKNLQDHLRS*VKFLCACSMSS
Trigger: TGATGACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp AAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATCCAGGAGCAGCTCGCGTGGTaGCTGCCACCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KPCVVPLANEHRTQEHIQEQLAW*LPPAQG
Trigger: TCCCTGGGCAGGTGGCAGGCACCACGCGAGCTGCTC...CTGGATGTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGAGCTCGCGTGGTGCCTaGCACCTGCCCAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTSSRGA*HLPREA
Trigger: TGCTTCCCTGGGCAGGTGGCAGGCACCACGCGAGCT...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp TCATTAAAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATGGAGCAGCTCGCGTaGTGCCTGCCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SLKPCVVPLANEHRTQEHMEQLA*CLPPAQ
Trigger: CTGGGCAGGTGGCAGGCACCACGCGAGCTGCTCCAT...GTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTTTAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATATGGAGCAGCTCGCGTaGTGCCTGCCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYMEQLA*CLPPAQ
Trigger: CTGGGCAGGTGGCAGGCACCACGCGAGCTGCTCCAT...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAATGGAGCAGCTCGCGTaGTGCCTGCCACCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKMEQLA*CLPPAQ
Trigger: CTGGGCAGGTGGCAGGCACCACGCGAGCTGCTCCAT...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAAGTCTGGTGCTGTGTaGTCGTGGAGGGCGGCGTGT +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKKSGAV*SWRAAC
Trigger: ACACGCCGCCCTCCACGATCACACAGCACCAGACTT...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR GCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGAGCTCGCGTGGTGCCTaGCACCTGCCCAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYASSRGA*HLPREA
Trigger: TGCTTCCCTGGGCAGGTGGCAGGCACCACGCGAGCT...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAAGCTCGCGTGGTGCCTaGCACCTGCCCAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQSSRGA*HLPREA
Trigger: TGCTTCCCTGGGCAGGTGGCAGGCACCACGCGAGCT...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTGAGCAGCTCGCGTGGTaGCTGCCACCTGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IKIFKITSGVELSFYAHVEQLAW*LPPAQG
Trigger: TCCCTGGGCAGGTGGCAGGCACCACGCGAGCTGCTC...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAAGCCCCGCTTCCCGGTaGCGGCAACACCTAGCGATG +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQSPASR*RQHLAM
Trigger: CATCGCTAGGTGTTGCCGCCACCGGGAAGCGGGGCT...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR CCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTGGGAGGACAGGGCGGTaGCATCCCTCTAGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCGRTGR*HPSSER
Trigger: TCTCTCGCTAGAGGGATGCCACCGCCCTGTCCTCCC...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR TCA 90 bp AAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATCCAGGGCTACCCATTAACTTaGCTGCTCACTGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: KPCVVPLANEHRTQEHIQGYPLT*LLTADF
Trigger: GAAATCAGCAGTGAGCAGTCAAGTTAATGGGTAGCC...CTGGATGTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGGAAGGACAGTGCACTTaGGATACAGCTTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTEGQCT*DTACRN
Trigger: GTTTCTGCAAGCTGTATCCCAAGTGCACTGTCCTTC...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCCCGTTTTAACATGGTaGGCTTCTCCTTCCCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSMRMFNVISLEDHLISPPVLTW*ASPSPA
Trigger: TGCAGGGGAAGGAGAAGCTCACCATGTTAAAACGGG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550003.1
CDS-3UTR GCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTGGAACCGAAGTCTGGTaGTGTGTGATCGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCGTEVW*CVIVEG
Trigger: GCCCTCCACGATCACACAGCACCAGACTTCGGTTCC...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR GCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAGCATCGCTTCCAAGATaGCAATCCGCCGTCACCATC +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKASLPR*QSAVTI
Trigger: GATGGTGACGGCGGATTGGCATCTTGGAAGCGATGC...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR GCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTATCTCTTACTCATCCTaGAGCCCCGCTTCCCGGTGG +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCISYSS*SPASRW
Trigger: CCACCGGGAAGCGGGGCTGCAGGATGAGTAAGAGAT...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR GCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATCCCTCTAGACATGGCTaGATATGGCACCACCATTTC +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYPSRHG*IWHHHF
Trigger: GAAATGGTGGTGCCATATGCAGCCATGTCTAGAGGG...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp TCATTAAAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACAGGACAGAAGGACAGTaGACTTGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SLKPCVVPLANEHRTQEHRTEGQ*TWDTAC
Trigger: GCAAGCTGTATCCCAAGTGCACTGTCCTTCTGTCCT...GTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTTTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTTATGATGGTTTGCACTaGATACAACTTTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSYDGLH*IQLSPT
Trigger: TGTGGGGGAAAGTTGTATCCAGTGCAAACCATCATA...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR TCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGGCACTTGACTGTTTGTaGCCGTTCTTCTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTALDCL*PFFYLV
Trigger: AACAAGATAGAAGAACGGTCACAAACAGTCAAGTGC...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGGATCACCTCAGGAGTTaGGTTAAGTTTCTATGCGCA +
Preference number: 4 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWDHLRS*VKFLCA
Trigger: TGCGCATAGAAACTTAACTCAACTCCTGAGGTGATC...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGCTGCTGAAATCTTCATaGCATGCAAGTTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTLLKSS*HASSCL
Trigger: CAGACATGAACTTGCATGTCATGAAGATTTCAGCAG...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp TCACAAACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAATCCCAGGAAAGTGTCTaGGTAGTGTTTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: SQTNRPKLPRIYGPLSWKSQESV*VVFWPL
Trigger: CAAAGGCCAAAACACTACTCAGACACTTTCCTGGGA...TTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGCTTTTTCAATTCACCTaGGATGGACAGCTTCACTAC +
Preference number: 4 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTLFQFT*DGQLHY
Trigger: GTAGTGAAGCTGTCCATCTCAGGTGAATTGAAAAAG...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR GCA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACACAGCATCTGTGGAGTaGCACCACCTCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYTASVE*HHLTSS
Trigger: GGAACTTGTGAGGTGGTGGCACTCCACAGATGCTGT...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCCCTCTAGACATGGCTaGATATGGCACCACCATTTC +
Preference number: 4 (lower is better)
Translates to: VSMRMFNVISLEDHLISPPSRHG*IWHHHF
Trigger: GAAATGGTGGTGCCATATGCAGCCATGTCTAGAGGG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACCCCCCAGTCACCCAGTaGATTCTGACTCTGAAATGC +
Preference number: 4 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYPPVTQ*ILTLKC
Trigger: GCATTTCAGAGTCAGAATGCACTGGGTGACTGGGGG...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR TCA 90 bp TCACAAACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACTCTTACTCATCCTCTaGGCTTCACCAGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: SQTNRPKLPRIYGPLSWKLLLIL*ASPEIN
Trigger: GTTGATTTCTGGTGAAGCTCAGAGGATGAGTAAGAG...TTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551619.5
CDS-3UTR CCA 90 bp TCATTAAAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACTGCATTTTTGCCATCTaGGATGATGGAGATGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLKPCVVPLANEHRTQEHCIFAI*DDGDEE
Trigger: CTCCTCATCTCCATCATCCCAGATGGCAAAAATGCA...GTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTTTAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550003.1
CDS-3UTR CCA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTCAATTCACCTGAGATaGACAGCTTCACTACTGCAT +
Preference number: 4 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWSIHLR*TASLLH
Trigger: ATGCAGTAGTGAAGCTGTCCATCTCAGGTGAATTGA...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR TCA 90 bp TCACAAACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAAAGTCTTGAGCCATTGTaGAAATCCACTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SQTNRPKLPRIYGPLSWKSLEPL*KSTQSH
Trigger: ATGGCTTTGAGTGGATTTTCACAATGGCTCAAGACT...TTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGTTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAACAGCATCTGTGGAGTaGCACCACCTCACAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQTASVE*HHLTSS
Trigger: GGAACTTGTGAGGTGGTGGCACTCCACAGATGCTGT...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTCCCTCTAGACATGGCTaGATATGGCACCACCATTTC +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCPSRHG*IWHHHF
Trigger: GAAATGGTGGTGCCATATGCAGCCATGTCTAGAGGG...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTGAAATCTTCATGACATaGAAGTTCATGTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSEIFMT*KFMSDF
Trigger: AAAGTCAGACATGAACTTGCATGTCATGAAGATTTC...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGAACAGAAAGGGAGAGTaGTCTAGAGGTACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWNRKGE*SRGTKY
Trigger: ATACTTTGTACCTCTAGAGCACTCTCCCTTTCTGTT...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAGCTTCTCCTTCCCCTaGATTTTTGCCATCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKSFSFP*IFAIWD
Trigger: ATCCCAGATGGCAAAAATGCAGGGGAAGGAGAAGCT...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550003.1
CDS-3UTR GCA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTAGAGTTTTACACGTTTaGCCTAGTTGTTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSRVLHV*PSCFDF
Trigger: AAAGTCAAAACAACTAGGGCAAACGTGTAAAACTCT...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR CCA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTCATTCAAACAGTCATTaGGATCAAGCAAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSHSNSH*DQAKES
Trigger: ACTTTCTTTTGCTTGATCCCAATGACTGTTTGAATG...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGGCTCCCCAGGATATATaGGCCTCTATCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYAAPQDI*ASILET
Trigger: GGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGC...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAGCTCCCCAGGATATATaGGCCTCTATCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQAPQDI*ASILET
Trigger: GGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGC...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAATGGGTTACCTTTATaGTGGTTTGCACTGGATACA +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYNGLPL*WFALDT
Trigger: TGTATCCAGTGCAAACCATCATAAAGGTAACCCATT...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR GCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAAGGACAGAAGGACAGTaGACTTGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVRTEGQ*TWDTAC
Trigger: GCAAGCTGTATCCCAAGTGCACTGTCCTTCTGTCCT...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGAGAAATCCTTCTCCTTaGATTCCTTCAAACTATAGG +
Preference number: 4 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWRNPSP*IPSNYR
Trigger: CCTATAGTTTGAAGGAATGCAAGGAGAAGGATTTCT...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATGCTCCCCAGGATATATaGGCCTCTATCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNAPQDI*ASILET
Trigger: GGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGC...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAATTGGAAATAGACTATTaGGCGCCTCTTTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKLEIDY*APLSSG
Trigger: ACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAA...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGGGCTACCCATTAACTTaGCTGCTCACTGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYAGYPLT*LLTADF
Trigger: GAAATCAGCAGTGAGCAGTCAAGTTAATGGGTAGCC...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATCTGAACAGCCTAAAATaGGTAAAACACAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYLNSLK*VKHRNP
Trigger: AGGATTTCTGTGTTTTACTCATTTTAGGCTGTTCAG...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTTTTAACCCTCAAGCGTaGGTGAATGCGCAAATAAGG +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCFNPQA*VNAQIR
Trigger: CCTTATTTGCGCATTCACTCACGCTTGAGGGTTAAA...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR GCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATAGGACAGAAGGACAGTaGACTTGGGATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNRTEGQ*TWDTAC
Trigger: GCAAGCTGTATCCCAAGTGCACTGTCCTTCTGTCCT...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTTTATTACAGCATCTGTaGAGTGCCACCACCTCACAA +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCLLQHL*SATTSQ
Trigger: TTGTGAGGTGGTGGCACTCCACAGATGCTGTAATAA...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATTCACTTGATTTCTCCTaGGTTAATGGGTTACCTTTA +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYSLDFS*VNGLPL
Trigger: TAAAGGTAACCCATTAACCCAGGAGAAATCAAGTGA...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR TCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTTTGGAAATAGACTATTaGGCGCCTCTTTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCLEIDY*APLSSG
Trigger: ACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAA...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTGGCTACCCATTAACTTaGCTGCTCACTGCTGATTTC +
Preference number: 4 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSGYPLT*LLTADF
Trigger: GAAATCAGCAGTGAGCAGTCAAGTTAATGGGTAGCC...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCTGAACAGCCTAAAATaGGTAAAACACAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: VSMRMFNVISLEDHLISPLNSLK*VKHRNP
Trigger: AGGATTTCTGTGTTTTACTCATTTTAGGCTGTTCAG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTTCCCAGGAAAGTGTCTaGGTAGTGTTTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: IKIFKITSGVELSFYAHVSQESV*VVFWPL
Trigger: CAAAGGCCAAAACACTACTCAGACACTTTCCTGGGA...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTCCCAGGAAAGTGTCTaGGTAGTGTTTTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFSQESV*VVFWPL
Trigger: CAAAGGCCAAAACACTACTCAGACACTTTCCTGGGA...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAACACAGAGAGGGAATaGTGGCATTTTGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKNTERE*WHFVVL
Trigger: AAGAACTACAAAATGCCATCATTCCCTCTCTGTGTT...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR TCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTATCTGAAATGCAGCTCTaGGCTTCACCAGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVSEMQL*ASPEIN
Trigger: GTTGATTTCTGGTGAAGCTCAGAGCTGCATTTCAGA...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR GCA 90 bp GAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATGAAATCTTCATGACATaGAAGTTCATGTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: EAMKSLGNRLLSASFKWYEIFMT*KFMSDF
Trigger: AAAGTCAGACATGAACTTGCATGTCATGAAGATTTC...ATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTAGAAATCCTTCTCCTTaGATTCCTTCAAACTATAGG +
Preference number: 4 (lower is better)
Translates to: VSMRMFNVISLEDHLISPRNPSP*IPSNYR
Trigger: CCTATAGTTTGAAGGAATGCAAGGAGAAGGATTTCT...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp TCATTAAAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACTTTTACATTTTTAGTTaGTCTTCCCAGGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: SLKPCVVPLANEHRTQEHFYIFS*SSQESV
Trigger: GACACTTTCCTGGGAAGAGCAACTAAAAATGTAAAA...GTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTTTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAGGACAGCTTCACTACTaGATCTACTCCTTACAGTCT +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQGQLHY*IYSLQS
Trigger: AGACTGTAAGGAGTAGATGCAGTAGTGAAGCTGTCC...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR CCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATGAAGGACAGTGCACTTaGGATACAGCTTGCAGAAAC +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNEGQCT*DTACRN
Trigger: GTTTCTGCAAGCTGTATCCCAAGTGCACTGTCCTTC...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAAGCACTTGACTGTTTGTaGCCGTTCTTCTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQALDCL*PFFYLV
Trigger: AACAAGATAGAAGAACGGTCACAAACAGTCAAGTGC...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAACTGCTGAAATCTTCATaGCATGCAAGTTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQLLKSS*HASSCL
Trigger: CAGACATGAACTTGCATGTCATGAAGATTTCAGCAG...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTGGACAGCTTCACTACTaGATCTACTCCTTACAGTCT +
Preference number: 4 (lower is better)
Translates to: IKIFKITSGVELSFYAHVGQLHY*IYSLQS
Trigger: AGACTGTAAGGAGTAGATGCAGTAGTGAAGCTGTCC...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR GCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCATTCTGACTCTGAAATaGAGCTCTGAGCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFILTLK*SSELHQ
Trigger: CTGGTGAAGCTCAGAGCTGCATTTCAGAGTCAGAAT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR CCA 90 bp TCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTCAATATGATGGTTTGCACTaGATACAACTTTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: SLGNRLLSASFKWYKNLQYDGLH*IQLSPT
Trigger: TGTGGGGGAAAGTTGTATCCAGTGCAAACCATCATA...TTGAAGATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000551449.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCATTCAAACAGTCATTaGGATCAAGCAAAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VSMRMFNVISLEDHLISPHSNSH*DQAKES
Trigger: ACTTTCTTTTGCTTGATCCCAATGACTGTTTGAATG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp TTTGAATCTTTACTTCTCAATGAAACTTCTGTCCCTTCCTTAGAATCCGACCAATCACTTGATTTCTCCTaGGTTAATGGGTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: FESLLLNETSVPSLESDQSLDFS*VNGLPA
Trigger: AGCAGGTAACCCATTAACCCAGGAGAAATCAAGTGA...TTGGTCGGATTCTAAGGAAGGGACAGAAGTTTCATTGAGAAGTAAAGATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549379.5
3UTR CAA 72 bp AATGAAAATGGCAATCCAGTTCTAACTACTACCTATTaGACAAAGAGCTTCAGCAGGGTGTTGTTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: NENGNPVLTTTY*TKSFSRVLLAL
Trigger: TAAGGCTAACAACACCCTGCTGAAGCTCTTTGTCAAATAGGTAGTAGTTAGAACTGGATTGCCATTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000416284.7
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTGCACTTGACTGTTTGTaGCCGTTCTTCTATCTTGTT +
Preference number: 4 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSALDCL*PFFYLV
Trigger: AACAAGATAGAAGAACGGTCACAAACAGTCAAGTGC...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATTTGGAAATAGACTATTaGGCGCCTCTTTCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNLEIDY*APLSSG
Trigger: ACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAA...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTACAGTTCAAATCTGCTaGAATCTTCATGACATGCAA +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCTVQIC*NLHDMQ
Trigger: TTGCATGTCATGAAGATTTCAGCAGATTTGAACTGT...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATAGTCTTGAGCCATTGTaGAAATCCACTCAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNSLEPL*KSTQSH
Trigger: ATGGCTTTGAGTGGATTTTCACAATGGCTCAAGACT...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATCTTTTTCAATTCACCTaGGATGGACAGCTTCACTAC +
Preference number: 4 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNLFQFT*DGQLHY
Trigger: GTAGTGAAGCTGTCCATCTCAGGTGAATTGAAAAAG...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR TCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAAACACAGAGAGGGAATaGTGGCATTTTGTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVNTERE*WHFVVL
Trigger: AAGAACTACAAAATGCCATCATTCCCTCTCTGTGTT...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR TCA 90 bp TTTGAATCTTTACTTCTCAATGAAACTTCTGTCCCTTCCTTAGAATCCGACCAATTCTCCATTCGAACTTaGAGAGTTTTACACGTTTGC +
Preference number: 4 (lower is better)
Translates to: FESLLLNETSVPSLESDQFSIRT*RVLHVC
Trigger: GCAAACGTGTAAAACTCTTCAAGTTCGAATGGAGAA...TTGGTCGGATTCTAAGGAAGGGACAGAAGTTTCATTGAGAAGTAAAGATTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR GCA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAAGCTTTATGATGGTTTaGACTGGATACAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVSFMMV*TGYNFP
Trigger: GGGAAAGTTGTATCCAGTGCAAACCATCATAAAGCT...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR GCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGAGCTTTATGATGGTTTaGACTGGATACAACTTTCCC +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYASFMMV*TGYNFP
Trigger: GGGAAAGTTGTATCCAGTGCAAACCATCATAAAGCT...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR GCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGAACAGAAAGGGAGAGTaGTCTAGAGGTACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYANRKGE*SRGTKY
Trigger: ATACTTTGTACCTCTAGAGCACTCTCCCTTTCTGTT...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAATTTTACATTTTTAGTTaGTCTTCCCAGGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKFYIFS*SSQESV
Trigger: GACACTTTCCTGGGAAGAGCAACTAAAAATGTAAAA...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTTATGATGGTTTGCACTaGATACAACTTTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSYDGLH*IQLSPT
Trigger: TGTGGGGGAAAGTTGTATCCAGTGCAAACCATCATA...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR CCA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTTCAATTCACCTGAGATaGACAGCTTCACTACTGCAT +
Preference number: 4 (lower is better)
Translates to: IKIFKITSGVELSFYAHVSIHLR*TASLLH
Trigger: ATGCAGTAGTGAAGCTGTCCATCTCAGGTGAATTGA...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
3UTR CAA 72 bp TTTAAACCAAGACGGGAGCTCATTTCTGGAGTTGTTTaGAATCTTTACTTCTCAATGAAACTTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: FKPRRELISGVV*NLYFSMKLLSL
Trigger: AAGGGACAGAAGTTTCATTGAGAAGTAAAGATTCAAAACAACTCCAGAAATGAGCTCCCGTCTTGGTTTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS-3UTR TCA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGACAGTTCAAATCTGCTaGAATCTTCATGACATGCAA +
Preference number: 4 (lower is better)
Translates to: SGIKIFKITSGVELSFYATVQIC*NLHDMQ
Trigger: TTGCATGTCATGAAGATTTCAGCAGATTTGAACTGT...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTGAAATCTTCATGACATaGAAGTTCATGTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCEIFMT*KFMSDF
Trigger: AAAGTCAGACATGAACTTGCATGTCATGAAGATTTC...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR GCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCAACAGAAAGGGAGAGTaGTCTAGAGGTACAAAGTAT +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFNRKGE*SRGTKY
Trigger: ATACTTTGTACCTCTAGAGCACTCTCCCTTTCTGTT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTTTTTACATTTTTAGTTaGTCTTCCCAGGAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: IFKITSGVELSFYAHVQCFYIFS*SSQESV
Trigger: GACACTTTCCTGGGAAGAGCAACTAAAAATGTAAAA...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR TCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCACAGTTCAAATCTGCTaGAATCTTCATGACATGCAA +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFTVQIC*NLHDMQ
Trigger: TTGCATGTCATGAAGATTTCAGCAGATTTGAACTGT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR TCA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTCTGAACAGCCTAAAATaGGTAAAACACAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSLNSLK*VKHRNP
Trigger: AGGATTTCTGTGTTTTACTCATTTTAGGCTGTTCAG...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCAGAAATCCTTCTCCTTaGATTCCTTCAAACTATAGG +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFRNPSP*IPSNYR
Trigger: CCTATAGTTTGAAGGAATGCAAGGAGAAGGATTTCT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR GCA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCAATCAATCTTCTTTCTaGTTCATACATCACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSSGIKIFKITSGVELSFNQSSF*FIHHSF
Trigger: GAAGCTGTGATGTATGAAGCAGAAAGAAGATTGATT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS GCA 90 bp CGCAGCCCTTGGCAGCGCCCGCGGTCGCCTCCTGTCCTCGCCGGATaGGCGCGGTGCGCTCAGCTCCCTGGACTGCAAGAATCAAGGCGG +
Preference number: 5 (lower is better)
Translates to: RSPWQRPRSPPVLAG*ARCAQLPGLQESRR
Trigger: CCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAGGCGACCGCGGGCGCTGCCAAGGGCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp CCTCCAGACGCCCGCGTTCCTCCGTCCAGGTGCCCCTGTTCCCACTaGTCGCAGATAGGTCCCCGCTGGTGCCCTCGCGGAGACTTGGCG +
Preference number: 5 (lower is better)
Translates to: PPDARVPPSRCPCSH*SQIGPRWCPRGDLA
Trigger: CGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGGGCACCTGGACGGAGGAACGCGGGCGTCTGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp TGGCAGCGCCCGCGGTCGCCTCCTGTCCTCGCCGGATGCGCGCGGTaGGCTCAGCTCCCTGGACTGCAAGAATCAAGGCGGTCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: WQRPRSPPVLAGCAR*AQLPGLQESRRSCC
Trigger: GCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAGGCGACCGCGGGCGCTGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp GCAGCAACTCCTGGCCAGCTTCAGCCCCTCAATCCCGCCTCGAAGTaGTGCGGGCAGAGCCCCACGCAGCCCACCCGCTGCCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: AATPGQLQPLNPASK*CGQSPTQPTRCPSR
Trigger: CCTAGAAGGGCAGCGGGTGGGCTGCGTGGGGCTCTGCCCGCAGCACTTCGAGGCGGGATTGAGGGGCTGAAGCTGGCCAGGAGTTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp AGAGCCCCACGCAGCCCACCCGCTGCCCTTCTAGGCATCGTGGGCTaGAAGGAAGGGAAACCCGCCGATGTCCCCCTGGTAGCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: RAPRSPPAALLGIVG*KEGKPADVPLVAVP
Trigger: GGGCACTGCTACCAGGGGGACATCGGCGGGTTTCCCTTCCTTCCAGCCCACGATGCCTAGAAGGGCAGCGGGTGGGCTGCGTGGGGCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp AAAGAGGGAGGGGAAGGCAACGCTGAGGACGGGAGGACAGGGCGGTaGCATCCCTCTAGCGAGAGAGAGCCAGAGCCCTCGGCGGCGAGG +
Preference number: 5 (lower is better)
Translates to: KEGGEGNAEDGRTGR*HPSSEREPEPSAAR
Trigger: CCTCGCCGCCGAGGGCTCTGGCTCTCTCTCGCTAGAGGGATGCCACCGCCCTGTCCTCCCGTCCTCAGCGTTGCCTTCCCCTCCCTCTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552075.5
CDS TCA 90 bp GCCGTCACCATCCAGGGGCATAGGGAACCGAAGTCTGGTGCTGTGTaGTCGTGGAGGGCGGCGTGTGAGTGTGGCCCTGAGCGTGCGAGT +
Preference number: 5 (lower is better)
Translates to: AVTIQGHREPKSGAV*SWRAACECGPERAS
Trigger: ACTCGCACGCTCAGGGCCACACTCACACGCCGCCCTCCACGATCACACAGCACCAGACTTCGGTTCCCTATGCCCCTGGATGGTGACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp CCGTCCAGGTGCCCCTGTTCCCACTGCTCGCAGATAGGTCCCCGCTaGTGCCCTCGCGGAGACTTGGCGCCTTCCACTCGAATCCACTTA +
Preference number: 5 (lower is better)
Translates to: PSRCPCSHCSQIGPR*CPRGDLAPSTRIHL
Trigger: TAAGTGGATTCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGGGCACCTGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp TCCAGGTGCCCCTGTTCCCACTGCTCGCAGATAGGTCCCCGCTGGTaGCCTCGCGGAGACTTGGCGCCTTCCACTCGAATCCACTTAGCA +
Preference number: 5 (lower is better)
Translates to: SRCPCSHCSQIGPRW*PRGDLAPSTRIHLA
Trigger: TGCTAAGTGGATTCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGGGCACCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp TCACCTTCAGGAAAGCAGCCTCGGCCACGCACTTCTCGAGTTCCCTaGCTCTCGCAGGTACCGGGTCTCCAACGTGGCGGAGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SPSGKQPRPRTSRVP*LSQVPGLQRGGVAG
Trigger: CCCAGCAACTCCGCCACGTTGGAGACCCGGTACCTGCGAGAGCCAGGGAACTCGAGAAGTGCGTGGCCGAGGCTGCTTTCCTGAAGGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp TGTCCCCCTGGTAGCAGTGCCCTGGCACCGTCACCACCGAGGAGGTaGGAGTTCCAACATCGAACACAAGCGAGCAGGTGTCGCCTGTGT +
Preference number: 5 (lower is better)
Translates to: CPPGSSALAPSPPRR*EFQHRTQASRCRLC
Trigger: ACACAGGCGACACCTGCTCGCTTGTGTTCGATGTTGGAACTCGCACCTCCTCGGTGGTGACGGTGCCAGGGCACTGCTACCAGGGGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp TTGCGGGCCGGCGCCAGCCTTATCGCTCTCGCATCGCTTCCAAGATaGCAATCCGCCGTCACCATCCAGGGGCATAGGGAACCGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LRAGASLIALASLPR*QSAVTIQGHREPKS
Trigger: AGACTTCGGTTCCCTATGCCCCTGGATGGTGACGGCGGATTGGCATCTTGGAAGCGATGCGAGAGCGATAAGGCTGGCGCCGGCCCGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416284.8
ENST00000551449.1
CDS CCA 90 bp TGGAAGGAAGGGAAACCCGCCGATGTCCCCCTGGTAGCAGTGCCCTaGCACCGTCACCACCGAGGAGGTGCGAGTTCCAACATCGAACAC +
Preference number: 5 (lower is better)
Translates to: WKEGKPADVPLVAVP*HRHHRGGASSNIEH
Trigger: GTGTTCGATGTTGGAACTCGCACCTCCTCGGTGGTGACGGTGCCAGGGCACTGCTACCAGGGGGACATCGGCGGGTTTCCCTTCCTTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp GTCGCCTCCTGTCCTCGCCGGATGCGCGCGGTGCGCTCAGCTCCCTaGACTGCAAGAATCAAGGCGGTCTTGCTGCAATTACCGCTCTTA +
Preference number: 5 (lower is better)
Translates to: VASCPRRMRAVRSAP*TARIKAVLLQLPLL
Trigger: TAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAGGCGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp CTCCTGTCCTCGCCGGATGCGCGCGGTGCGCTCAGCTCCCTGGACTaGAAGAATCAAGGCGGTCTTGCTGCAATTACCGCTCTTATTCCA +
Preference number: 5 (lower is better)
Translates to: LLSSPDARGALSSLD*KNQGGLAAITALIP
Trigger: TGGAATAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 90 bp CCCTGGCAGGAGGATCACTTGAGGCGAGCAGTTCAAAACCAGCCATaGATGGAGTTTGCAGGGCTGGACGTTGCTCTGGGTGAGTCAGTG +
Preference number: 5 (lower is better)
Translates to: PWQEDHLRRAVQNQP*MEFAGLDVALGESV
Trigger: CACTGACTCACCCAGAGCAACGTCCAGCCCTGCAAACTCCATTCATGGCTGGTTTTGAACTGCTCGCCTCAAGTGATCCTCCTGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550396.1
CDS TCA 90 bp TCCCGCCCTCCCTCTTGTTCTCTGGGGAAAGGCAATTGGACAGAATaGTTCACCTTCAGGAAAGCAGCCTCGGCCACGCACTTCTCGAGT +
Preference number: 5 (lower is better)
Translates to: SRPPSCSLGKGNWTE*FTFRKAASATHFSS
Trigger: ACTCGAGAAGTGCGTGGCCGAGGCTGCTTTCCTGAAGGTGAATCATTCTGTCCAATTGCCTTTCCCCAGAGAACAAGAGGGAGGGCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 90 bp ACCCTATTCCACCCAGCCTGGCTGTCCAGTGAGTACAGAGTGACTTaGCTCCCCCGTATAGTGCAGCGAGAATGCAGGAGAATAGGTCCT +
Preference number: 5 (lower is better)
Translates to: TLFHPAWLSSEYRVT*LPRIVQRECRRIGP
Trigger: AGGACCTATTCTCCTGCATTCTCGCTGCACTATACGGGGGAGCCAAGTCACTCTGTACTCACTGGACAGCCAGGCTGGGTGGAATAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 90 bp TGTGGATGTGTTTCCTCCTCCGATGGCAAAGACGGTTCAGGAATCTaGCATCCAAGCTGGAATCCCCCTGAAGCGGGTGAAGGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: CGCVSSSDGKDGSGI*HPSWNPPEAGEGEP
Trigger: AGGCTCACCTTCACCCGCTTCAGGGGGATTCCAGCTTGGATGTCAGATTCCTGAACCGTCTTTGCCATCGGAGGAGGAAACACATCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 90 bp GCGCGGTGCGCTCAGCTCCCTGGACTGCAAGAATCAAGGCGGTCTTaGTGCAATTACCGCTCTTATTCCATCTCTGATTTGTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ARCAQLPGLQESRRS*CNYRSYSISDLFAF
Trigger: AAAAGCAAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS-3UTR CAA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTCCTTCCCCTGCATTTTaGCCATCTGGGATGATGGAG +
Preference number: 5 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSPSPAF*PSGMME
Trigger: CTCCATCATCCCAGATGGCAAAAATGCAGGGGAAGG...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550003.1
CDS TCA 90 bp CCTGACCTCCTCCCAGTATTTAGAATGATAAACCTGCCAGGATGGTaGCTGCTCTCGTTGCCTGATCCTTTGGCAGTAGAAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: PDLLPVFRMINLPGW*LLSLPDPLAVEGRN
Trigger: ATTTCTGCCTTCTACTGCCAAAGGATCAGGCAACGAGAGCAGTCACCATCCTGGCAGGTTTATCATTCTAAATACTGGGAGGAGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 90 bp CGGTGCGCTCAGCTCCCTGGACTGCAAGAATCAAGGCGGTCTTGCTaGAATTACCGCTCTTATTCCATCTCTGATTTGTTTGCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: RCAQLPGLQESRRSC*NYRSYSISDLFAFK
Trigger: CTTAAAAGCAAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS-3UTR CAA 90 bp ATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAAATATGCTCCTGCAGCTTTaGCGGGCCGGCGCCAGCCTT +
Preference number: 5 (lower is better)
Translates to: MKSLGNRLLSASFKWYKNMLLQL*RAGASL
Trigger: AAGGCTGGCGCCGGCCCGCAAAAGCTGCAGGAGCAT...ATTTTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS-3UTR CAA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTCTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS GCA 90 bp ATCTTCTTTCTGCTTCATACATCACAGCTTCCCCCAGTCACCCAGTaGATTCTGACTCTGAAATGCAGCTCTGAGCTTCACCAGAAATCA +
Preference number: 5 (lower is better)
Translates to: IFFLLHTSQLPPVTQ*ILTLKCSSELHQKS
Trigger: TGATTTCTGGTGAAGCTCAGAGCTGCATTTCAGAGTCAGAATGCACTGGGTGACTGGGGGAAGCTGTGATGTATGAAGCAGAAAGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS TCA 90 bp GGTATACTGCATAGGGTATTATTGTATCTAAGGTGGTGCTTAAGCTaGTTCTTCAACAGGCCATTCCGTTGCTCTATCCGGCCGGCAATT +
Preference number: 5 (lower is better)
Translates to: GILHRVLLYLRWCLS*FFNRPFRCSIRPAI
Trigger: AATTGCCGGCCGGATAGAGCAACGGAATGGCCTGTTGAAGAATCAGCTTAAGCACCACCTTAGATACAATAATACCCTATGCAGTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 90 bp TGGTCTTGTTGGCTTACCTGGTGGGATGATCCAGTCACTCATCCTTaGGAGTCACCATACCTTTCTCAGGTCATCAATACTTTACTAGTC +
Preference number: 5 (lower is better)
Translates to: WSCWLTWWDDPVTHP*ESPYLSQVINTLLV
Trigger: GACTAGTAAAGTATTGATGACCTGAGAAAGGTATGGTGACTCTCAAGGATGAGTGACTGGATCATCCCACCAGGTAAGCCAACAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS-3UTR CAA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGGAGCTTTATGATGGTTaGCACTGGATACAACTTTCC +
Preference number: 5 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTELYDG*HWIQLS
Trigger: GGAAAGTTGTATCCAGTGCAAACCATCATAAAGCTC...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR CAA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGCTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGTATGTCTGCATTCAAACAGTCATaGGGATCAAGCAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: DQSSPGYMGLYPGNQRMSAFKQS*GSSKRK
Trigger: CTTTCTTTTGCTTGATCCCAATGACTGTTTGAATGC...AGACATACGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS TCA 90 bp TTGAGGCTCAAGTTTGGCTCCTACGTCTCACAGAAACTGAGAGATTaGGTTGCTATCTCCCTGGATGTTTACATTTCAAAACGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRLKFGSYVSQKLRD*VAISLDVYISKRWL
Trigger: CAGCCAACGTTTTGAAATGTAAACATCCAGGGAGATAGCAACTCAATCTCTCAGTTTCTGTGAGACGTAGGAGCCAAACTTGAGCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549958.5
CDS-3UTR CAA 90 bp ACTAATAGACCAAAGCTCCCCAGGATATATGGGCCTCTATCCTGGAAACCAACGATTTCTGTTCCACTATaGAAGCATCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: TNRPKLPRIYGPLSWKPTISVPL*KHPHMM
Trigger: CATCATGTGTGGATGCTTCAATAGTGGAACAGAAAT...CGTTGGTTTCCAGGATAGAGGCCCATATATCCTGGGGAGCTTTGGTCTATTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp AAGCCATGTGTAGTCCCACTAGCAAATGAACATAGGACCCAGGAACACATCCAGGTTACCCTAGTTGTTTaGACTTTATTCCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: KPCVVPLANEHRTQEHIQVTLVV*TLFPEE
Trigger: TTCCTCTGGGAATAAAGTCAAAACAACTAGGGTAAC...CTGGATGTGTTCCTGGGTCCTATGTTCATTTGCTAGTGGGACTACACATGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGGTTACCCTAGTTGTTTaGACTTTATTCCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWVTLVV*TLFPEE
Trigger: TTCCTCTGGGAATAAAGTCAAAACAACTAGGGTAAC...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GAAGAGGCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTTTGCCCTAGTTGTTTaGACTTTATTCCCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: EEAMKSLGNRLLSASFKWFALVV*TLFPEE
Trigger: TTCCTCTGGGAATAAAGTCAAAACAACTAGGGCAAA...CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGCCTCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS TCA 90 bp ACCCTTCTTGTGCCCATTGTTCCAGCTTTGAGGATAGAAGCTTGTTaGTGCCAACCATTGGAGTCATTCTGTTTATTCAGTACCTCTTTT +
Preference number: 5 (lower is better)
Translates to: TLLVPIVPALRIEAC*CQPLESFCLFSTSF
Trigger: AAAAGAGGTACTGAATAAACAGAATGACTCCAATGGTTGGCATCAACAAGCTTCTATCCTCAAAGCTGGAACAATGGGCACAAGAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 90 bp AAATCATACATGTATAGAAGAAATGCATGGCTTCTTCACCCTGATTaGCTTTTCCCTGCTCCCCATGTGTCTCAGGAGAAGAATGCTCTT +
Preference number: 5 (lower is better)
Translates to: KSYMYRRNAWLLHPD*LFPAPHVSQEKNAL
Trigger: AAGAGCATTCTTCTCCTGAGACACATGGGGAGCAGGGAAAAGTCAATCAGGGTGAAGAAGCCATGCATTTCTTCTATACATGTATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548780.1
CDS GCA 90 bp CCACCTCTACTTCTACATTTGATTCCCATATCCATAAATTCTATTTaGTGGGAACACAGCAACATATGCTGGCCATTGATTCAGAGGGTA +
Preference number: 5 (lower is better)
Translates to: PPLLLHLIPISINSI*WEHSNICWPLIQRV
Trigger: TACCCTCTGAATCAATGGCCAGCATATGTTGCTGTGTTCCCAGCAAATAGAATTTATGGATATGGGAATCAAATGTAGAAGTAGAGGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 90 bp ACTAGTCAATTTACTGTCAAAGTTGTGCAAGGGCATACCAAGAGATaGCAAATACATTCCTTTTTGCCATCACTGTATAAGAGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: TSQFTVKVVQGHTKR*QIHSFLPSLYKSSL
Trigger: CAGGCTGCTCTTATACAGTGATGGCAAAAAGGAATGTATTTGGCATCTCTTGGTATGCCCTTGCACAACTTTGACAGTAAATTGACTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS-3UTR CAA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTATTTCTGTTCCACTATaGAAGCATCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: VSMRMFNVISLEDHLISPISVPL*KHPHMM
Trigger: CATCATGTGTGGATGCTTCAATAGTGGAACAGAAAT...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATAT +
Preference number: 5 (lower is better)
Translates to: IFKITSGVELSFYAHVQCSFSRV*LALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCT...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTGCATTCAAACAGTCATaGGGATCAAGCAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: VSMRMFNVISLEDHLISPAFKQS*GSSKRK
Trigger: CTTTCTTTTGCTTGATCCCAATGACTGTTTGAATGC...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GTTTCTATGCGCATGTTCAATGTCATCAGCCTTGAGGATCACTTGATTTCTCCTCTTCTCCATTCGAACTaGAAGAGTTTTACACGTTTG +
Preference number: 5 (lower is better)
Translates to: VSMRMFNVISLEDHLISPLLHSN*KSFTRL
Trigger: CAAACGTGTAAAACTCTTCAAGTTCGAATGGAGAAG...AGGAGAAATCAAGTGATCCTCAAGGCTGATGACATTGAACATGCGCATAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549379.5
CDS TCA 90 bp ATCACATGGTCACGTGCTCACTACCACATCTCTTTTGCAATAAAATaGATCCCTTTGTTTGATGTGATATTGGGAAGATCCTGTGTCATG +
Preference number: 5 (lower is better)
Translates to: ITWSRAHYHISFAIK*IPLFDVILGRSCVM
Trigger: CATGACACAGGATCTTCCCAATATCACATCAAACAAAGGGATTCATTTTATTGCAAAAGAGATGTGGTAGTGAGCACGTGACCATGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 90 bp GAGGGAATGATGGCATTTTGTAGTTCTTTACTTTTTCAATTCACCTaGGATGGACAGCTTCACTACTGCATCTACTCCTTACAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: EGMMAFCSSLLFQFT*DGQLHYCIYSLQSE
Trigger: TTCAGACTGTAAGGAGTAGATGCAGTAGTGAAGCTGTCCATCTCAGGTGAATTGAAAAAGTAAAGAACTACAAAATGCCATCATTCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS CCA 90 bp CCTCTACTTCTACATTTGATTCCCATATCCATAAATTCTATTTGCTaGGAACACAGCAACATATGCTGGCCATTGATTCAGAGGGTATAC +
Preference number: 5 (lower is better)
Translates to: PLLLHLIPISINSIC*EHSNICWPLIQRVY
Trigger: GTATACCCTCTGAATCAATGGCCAGCATATGTTGCTGTGTTCCCAGCAAATAGAATTTATGGATATGGGAATCAAATGTAGAAGTAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS-3UTR CAA 90 bp ATCCTGGAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACGACCGTTCTTCTATCTaGTTCTTATTACAGCATCTG +
Preference number: 5 (lower is better)
Translates to: ILETNVCLTDHVSEFLEYDRSSI*FLLQHL
Trigger: CAGATGCTGTAATAAGAACAAGATAGAAGAACGGTC...GTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTCCAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAATTTCTGTTCCACTATaGAAGCATCCACACATGATG +
Preference number: 5 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKISVPL*KHPHMM
Trigger: CATCATGTGTGGATGCTTCAATAGTGGAACAGAAAT...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS TCA 90 bp TGCTCACTACCACATCTCTTTTGCAATAAAATGAATCCCTTTGTTTaGTGTGATATTGGGAAGATCCTGTGTCATGAGATCAAACACTCC +
Preference number: 5 (lower is better)
Translates to: CSLPHLFCNKMNPFV*CDIGKILCHEIKHS
Trigger: GGAGTGTTTGATCTCATGACACAGGATCTTCCCAATATCACATCAAACAAAGGGATTCATTTTATTGCAAAAGAGATGTGGTAGTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS-3UTR CAA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGGAGCTTTATGATGGTTaGCACTGGATACAACTTTCC +
Preference number: 5 (lower is better)
Translates to: SGIKIFKITSGVELSFYAELYDG*HWIQLS
Trigger: GGAAAGTTGTATCCAGTGCAAACCATCATAAAGCTC...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000549379.5
ENST00000551619.5
CDS-3UTR CAA 90 bp ATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCAATGTGACCGTTCTTCTATCTaGTTCTTATTACAGCATCTG +
Preference number: 5 (lower is better)
Translates to: IFKITSGVELSFYAHVQCDRSSI*FLLQHL
Trigger: CAGATGCTGTAATAAGAACAAGATAGAAGAACGGTC...ACATTGAACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GGAAATTCTAACAGGACAATTTTTGAAGCATCTTCTGAACAGCCTAAAATGAGTCTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: GNSNRTIFEASSEQPKMSLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...ACTCATTTTAGGCTGTTCAGAAGATGCTTCAAAAATTGTCCTGTTAGAATTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTCTTGGAAATAGACTATaGAGCGCCTCTTTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: IKIFKITSGVELSFYAHVLGNRL*SASFKW
Trigger: CCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAG...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551449.1
ENST00000551619.5
CDS-3UTR CAA 90 bp CTTTCAAGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATAT +
Preference number: 5 (lower is better)
Translates to: LSSGIKIFKITSGVELSFSFSRV*LALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCT...GAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACTTGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp ATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGCATGTTAGCTTCAGCAGGGTGTaGTTAGCCTTAGGGAAATAT +
Preference number: 5 (lower is better)
Translates to: IKIFKITSGVELSFYAHVSFSRV*LALGKY
Trigger: ATATTTCCCTAAGGCTAACAACACCCTGCTGAAGCT...AACATGCGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp GCCATGAAATCCCTTGGAAATAGACTATTGAGCGCCTCTTTCAAGTGGTATAAAGGCCTAACAAATTGTTaGAATAGGAAAACTGTAAGC +
Preference number: 5 (lower is better)
Translates to: AMKSLGNRLLSASFKWYKGLTNC*NRKTVS
Trigger: GCTTACAGTTTTCCTATTCAAACAATTTGTTAGGCC...TTTATACCACTTGAAAGAGGCGCTCAATAGTCTATTTCCAAGGGATTTCATGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS TCA 90 bp TCTACTACTTATCATGTGCTAAAAATCAAGGTTTTAGCAAGGCTCTaGTCCTTTCTGGAGGCTTTAACAGAGAATTCATTTCCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: STTYHVLKIKVLARL*SFLEALTENSFPCS
Trigger: GGAACAAGGAAATGAATTCTCTGTTAAAGCCTCCAGAAAGGATCAGAGCCTTGCTAAAACCTTGATTTTTAGCACATGATAAGTAGTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS-3UTR CAA 90 bp GAAACCAACGTATGTCTAACTGACCACGTCAGTGAGTTTTTAGAATACAAAGTAGCATTCAAACAGTCATaGGGATCAAGCAAAAGAAAG +
Preference number: 5 (lower is better)
Translates to: ETNVCLTDHVSEFLEYKVAFKQS*GSSKRK
Trigger: CTTTCTTTTGCTTGATCCCAATGACTGTTTGAATGC...TACTTTGTATTCTAAAAACTCACTGACGTGGTCAGTTAGACATACGTTGGTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS-3UTR CAA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGTACCTTTATGATGGTTaGCACTGGATACAACTTTCC +
Preference number: 5 (lower is better)
Translates to: SGIKIFKITSGVELSFYAYLYDG*HWIQLS
Trigger: GGAAAGTTGTATCCAGTGCAAACCATCATAAAGGTA...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551449.1
CDS TCA 90 bp TCTAGATTATCCAACATTAGACTGCATGCCTTTTGCAGTATACAGTaGTGTACATCTTTGTTTCACATAGTAAACATCCATGTAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SRLSNIRLHAFCSIQ*CTSLFHIVNIHVAP
Trigger: TGGAGCTACATGGATGTTTACTATGTGAAACAAAGATGTACATCACTGTATACTGCAAAAGGCATGCAGTCTAATGTTGGATAATCTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547919.1
ENST00000549456.5
CDS GCA 90 bp AAGGCTTTAGCCAGAGAACTTTTTCTAGATTATCCAACATTAGACTaGATGCCTTTTGCAGTATACAGTGATGTACATCTTTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: KALARELFLDYPTLD*MPFAVYSDVHLCFT
Trigger: TGTGAAACAAAGATGTACATCACTGTATACTGCAAAAGGCATGCAGTCTAATGTTGGATAATCTAGAAAAAGTTCTCTGGCTAAAGCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549456.5
CDS-3UTR CAA 90 bp AGTGGTATAAAAATCTTCAAGATCACCTCAGGAGTTGAGTTAAGTTTCTATGCGGGCCTAACAAATTGTTaGAATAGGAAAACTGTAAGC +
Preference number: 5 (lower is better)
Translates to: SGIKIFKITSGVELSFYAGLTNC*NRKTVS
Trigger: GCTTACAGTTTTCCTATTCAAACAATTTGTTAGGCC...CGCATAGAAACTTAACTCAACTCCTGAGGTGATCTTGAAGATTTTTATACCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000549379.5
ENST00000550003.1
ENST00000551619.5
CDS GCA 72 bp CCTGGCCAGCTTCAGCCCCTCAATCCCGCCTCGAAGTaGTGCGGGCAGAGCCCCACGCAGCCCACCCGCTGC +
Preference number: 6 (lower is better)
Translates to: PGQLQPLNPASK*CGQSPTQPTRC
Trigger: GCAGCGGGTGGGCTGCGTGGGGCTCTGCCCGCAGCACTTCGAGGCGGGATTGAGGGGCTGAAGCTGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp TGGCAGCGCCCGCGGTCGCCTCCTGTCCTCGCCGGATaGGCGCGGTGCGCTCAGCTCCCTGGACTGCAAGAA +
Preference number: 6 (lower is better)
Translates to: WQRPRSPPVLAG*ARCAQLPGLQE
Trigger: TTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAGGCGACCGCGGGCGCTGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp GCCCGCGTTCCTCCGTCCAGGTGCCCCTGTTCCCACTaGTCGCAGATAGGTCCCCGCTGGTGCCCTCGCGGA +
Preference number: 6 (lower is better)
Translates to: ARVPPSRCPCSH*SQIGPRWCPRG
Trigger: TCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGGGCACCTGGACGGAGGAACGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp CCGCGGTCGCCTCCTGTCCTCGCCGGATGCGCGCGGTaGGCTCAGCTCCCTGGACTGCAAGAATCAAGGCGG +
Preference number: 6 (lower is better)
Translates to: PRSPPVLAGCAR*AQLPGLQESRR
Trigger: CCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACAGGAGGCGACCGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp GGGGAAGGCAACGCTGAGGACGGGAGGACAGGGCGGTaGCATCCCTCTAGCGAGAGAGAGCCAGAGCCCTCG +
Preference number: 6 (lower is better)
Translates to: GEGNAEDGRTGR*HPSSEREPEPS
Trigger: CGAGGGCTCTGGCTCTCTCTCGCTAGAGGGATGCCACCGCCCTGTCCTCCCGTCCTCAGCGTTGCCTTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552075.5
CDS CCA 72 bp GGGAAACCCGCCGATGTCCCCCTGGTAGCAGTGCCCTaGCACCGTCACCACCGAGGAGGTGCGAGTTCCAAC +
Preference number: 6 (lower is better)
Translates to: GKPADVPLVAVP*HRHHRGGASSN
Trigger: GTTGGAACTCGCACCTCCTCGGTGGTGACGGTGCCAGGGCACTGCTACCAGGGGGACATCGGCGGGTTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp CGCAGCCCACCCGCTGCCCTTCTAGGCATCGTGGGCTaGAAGGAAGGGAAACCCGCCGATGTCCCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: RSPPAALLGIVG*KEGKPADVPLV
Trigger: TACCAGGGGGACATCGGCGGGTTTCCCTTCCTTCCAGCCCACGATGCCTAGAAGGGCAGCGGGTGGGCTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp TGCCCCTGTTCCCACTGCTCGCAGATAGGTCCCCGCTaGTGCCCTCGCGGAGACTTGGCGCCTTCCACTCGA +
Preference number: 6 (lower is better)
Translates to: CPCSHCSQIGPR*CPRGDLAPSTR
Trigger: TCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 72 bp CGGTGGCGGCAACACCTAGCGATGCTCCTGCAGCTTTaGCGGGCCGGCGCCAGCCTTATCGCTCTCGCATCG +
Preference number: 6 (lower is better)
Translates to: RWRQHLAMLLQL*RAGASLIALAS
Trigger: CGATGCGAGAGCGATAAGGCTGGCGCCGGCCCGCAAAAGCTGCAGGAGCATCGCTAGGTGTTGCCGCCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416284.8
ENST00000551449.1
CDS CAA 90 bp CCCGCTTCCCGGTGGCGGCAACACCTAGCGATGCTCCTGCAGCTTTaGCGGGCCGGCGCCAGCCTTATCGCTCTCGCATCGCTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: PASRWRQHLAMLLQL*RAGASLIALASLPR
Trigger: TCTTGGAAGCGATGCGAGAGCGATAAGGCTGGCGCCGGCCCGCAAAAGCTGCAGGAGCATCGCTAGGTGTTGCCGCCACCGGGAAGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416284.8
ENST00000551449.1
CDS GCA 72 bp CCCTGTTCCCACTGCTCGCAGATAGGTCCCCGCTGGTaGCCTCGCGGAGACTTGGCGCCTTCCACTCGAATC +
Preference number: 6 (lower is better)
Translates to: PCSHCSQIGPRW*PRGDLAPSTRI
Trigger: GATTCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGAACAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp GCTCTCGCAGGTACCGGGTCTCCAACGTGGCGGAGTTaGTGGGAAGCTCGGGACAGGAAGGAGGAGAGGCTC +
Preference number: 6 (lower is better)
Translates to: ALAGTGSPTWRS*WEARDRKEERL
Trigger: GAGCCTCTCCTCCTTCCTGTCCCGAGCTTCCCAGCAACTCCGCCACGTTGGAGACCCGGTACCTGCGAGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp GGAAAGCAGCCTCGGCCACGCACTTCTCGAGTTCCCTaGCTCTCGCAGGTACCGGGTCTCCAACGTGGCGGA +
Preference number: 6 (lower is better)
Translates to: GKQPRPRTSRVP*LSQVPGLQRGG
Trigger: TCCGCCACGTTGGAGACCCGGTACCTGCGAGAGCCAGGGAACTCGAGAAGTGCGTGGCCGAGGCTGCTTTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 90 bp TCCCACTGCTCGCAGATAGGTCCCCGCTGGTGCCCTCGCGGAGACTaGGCGCCTTCCACTCGAATCCACTTAGCAGCAACTCCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: SHCSQIGPRWCPRGD*APSTRIHLAATPGQ
Trigger: CTGGCCAGGAGTTGCTGCTAAGTGGATTCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGAGCAGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp ATCCAGGGGCATAGGGAACCGAAGTCTGGTGCTGTGTaGTCGTGGAGGGCGGCGTGTGAGTGTGGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: IQGHREPKSGAV*SWRAACECGPE
Trigger: CTCAGGGCCACACTCACACGCCGCCCTCCACGATCACACAGCACCAGACTTCGGTTCCCTATGCCCCTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp TCGCCGGATGCGCGCGGTGCGCTCAGCTCCCTGGACTaGAAGAATCAAGGCGGTCTTGCTGCAATTACCGCT +
Preference number: 6 (lower is better)
Translates to: SPDARGALSSLD*KNQGGLAAITA
Trigger: AGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp GGTAGCAGTGCCCTGGCACCGTCACCACCGAGGAGGTaGGAGTTCCAACATCGAACACAAGCGAGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: GSSALAPSPPRR*EFQHRTQASRC
Trigger: ACACCTGCTCGCTTGTGTTCGATGTTGGAACTCGCACCTCCTCGGTGGTGACGGTGCCAGGGCACTGCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp GGCGCCAGCCTTATCGCTCTCGCATCGCTTCCAAGATaGCAATCCGCCGTCACCATCCAGGGGCATAGGGAA +
Preference number: 6 (lower is better)
Translates to: GASLIALASLPR*QSAVTIQGHRE
Trigger: TTCCCTATGCCCCTGGATGGTGACGGCGGATTGGCATCTTGGAAGCGATGCGAGAGCGATAAGGCTGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416284.8
ENST00000551449.1
CDS CCA 72 bp TGTCCTCGCCGGATGCGCGCGGTGCGCTCAGCTCCCTaGACTGCAAGAATCAAGGCGGTCTTGCTGCAATTA +
Preference number: 6 (lower is better)
Translates to: CPRRMRAVRSAP*TARIKAVLLQL
Trigger: TAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGCGCACCGCGCGCATCCGGCGAGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 72 bp TCGCAGATAGGTCCCCGCTGGTGCCCTCGCGGAGACTaGGCGCCTTCCACTCGAATCCACTTAGCAGCAACT +
Preference number: 6 (lower is better)
Translates to: SQIGPRWCPRGD*APSTRIHLAAT
Trigger: AGTTGCTGCTAAGTGGATTCGAGTGGAAGGCGCCAAGTCTCCGCGAGGGCACCAGCGGGGACCTATCTGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp CTATTGAAGCATCCACACATGATGGAGCAGCTCGCGTaGTGCCTGCCACCTGCCCAGGGAAGCAGGAGCACT +
Preference number: 6 (lower is better)
Translates to: LLKHPHMMEQLA*CLPPAQGSRST
Trigger: AGTGCTCCTGCTTCCCTGGGCAGGTGGCAGGCACCACGCGAGCTGCTCCATCATGTGTGGATGCTTCAATAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000416284.8
ENST00000549379.5
ENST00000549958.5
ENST00000550003.1
ENST00000551619.5
ENST00000552075.5
CDS CCA 72 bp CTGACACTCCAGGTTGAGTTAAGCAGTAAAATGGAATaGCAGGGCCGGGCGGCGTTGCCTCGCCTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LTLQVELSSKME*QGRAALPRLSL
Trigger: GAGAGAGAGGCGAGGCAACGCCGCCCGGCCCTGCCATTCCATTTTACTGCTTAACTCAACCTGGAGTGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp CACCCAGCCTGGCTGTCCAGTGAGTACAGAGTGACTTaGCTCCCCCGTATAGTGCAGCGAGAATGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: HPAWLSSEYRVT*LPRIVQRECRR
Trigger: TCTCCTGCATTCTCGCTGCACTATACGGGGGAGCCAAGTCACTCTGTACTCACTGGACAGCCAGGCTGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CCA 72 bp AGTATCTCTTACTCATCCTGCAGCCCCGCTTCCCGGTaGCGGCAACACCTAGCGATGCTCCTGCAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: SISYSSCSPASR*RQHLAMLLQLL
Trigger: CAAAAGCTGCAGGAGCATCGCTAGGTGTTGCCGCCACCGGGAAGCGGGGCTGCAGGATGAGTAAGAGATACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416284.8
ENST00000551449.1
CDS CCA 72 bp GTGCGCGCGCGTGTGTGGATGTGTTTCCTCCTCCGATaGCAAAGACGGTTCAGGAATCTGACATCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: VRARVWMCFLLR*QRRFRNLTSKL
Trigger: CAGCTTGGATGTCAGATTCCTGAACCGTCTTTGCCATCGGAGGAGGAAACACATCCACACACGCGCGCGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp CCCTCTTGTTCTCTGGGGAAAGGCAATTGGACAGAATaGTTCACCTTCAGGAAAGCAGCCTCGGCCACGCAC +
Preference number: 6 (lower is better)
Translates to: PSCSLGKGNWTE*FTFRKAASATH
Trigger: GTGCGTGGCCGAGGCTGCTTTCCTGAAGGTGAATCATTCTGTCCAATTGCCTTTCCCCAGAGAACAAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp GTTTCCTCCTCCGATGGCAAAGACGGTTCAGGAATCTaGCATCCAAGCTGGAATCCCCCTGAAGCGGGTGAA +
Preference number: 6 (lower is better)
Translates to: VSSSDGKDGSGI*HPSWNPPEAGE
Trigger: TTCACCCGCTTCAGGGGGATTCCAGCTTGGATGTCAGATTCCTGAACCGTCTTTGCCATCGGAGGAGGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp GAGGATCACTTGAGGCGAGCAGTTCAAAACCAGCCATaGATGGAGTTTGCAGGGCTGGACGTTGCTCTGGGT +
Preference number: 6 (lower is better)
Translates to: EDHLRRAVQNQP*MEFAGLDVALG
Trigger: ACCCAGAGCAACGTCCAGCCCTGCAAACTCCATTCATGGCTGGTTTTGAACTGCTCGCCTCAAGTGATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550396.1
CDS CAA 72 bp CTCCCGCCCTCCCTCTTGTTCTCTGGGGAAAGGCAATaGGACAGAATGATTCACCTTCAGGAAAGCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LPPSLLFSGERQ*DRMIHLQESSL
Trigger: GAGGCTGCTTTCCTGAAGGTGAATCATTCTGTCCAATTGCCTTTCCCCAGAGAACAAGAGGGAGGGCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp GATAAACCTGCCAGGATGGTGACTGCTCTCGTTGCCTaGTCCTTTGGCAGTAGAAGGCAGAAATGCCCCAGT +
Preference number: 6 (lower is better)
Translates to: DKPARMVTALVA*SFGSRRQKCPS
Trigger: ACTGGGGCATTTCTGCCTTCTACTGCCAAAGGATCAGGCAACGAGAGCAGTCACCATCCTGGCAGGTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 72 bp AATCTTTTAGAAAGTCGCCATAAAGGGCAGAGCCCCTaGTCCACTCTAGAACCCTATTCCACCCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: NLLESRHKGQSP*STLEPYSTQPG
Trigger: GCCAGGCTGGGTGGAATAGGGTTCTAGAGTGGAGCAGGGGCTCTGCCCTTTATGGCGACTTTCTAAAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 90 bp GTTACCCAGGCTGGTCTTCAACTCTTGGCTTCATGTGATCCTCTCTaGACTAGCTCCTCTGCTGGTCTTGTTGGCTTACCTGGTGGGATG +
Preference number: 6 (lower is better)
Translates to: VTQAGLQLLASCDPL*TSSSAGLVGLPGGM
Trigger: CATCCCACCAGGTAAGCCAACAAGACCAGCAGAGGAGCTAGTCAAGAGAGGATCACATGAAGCCAAGAGTTGAAGACCAGCCTGGGTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 72 bp ATGAATGGAGTTTGCAGGGCTGGACGTTGCTCTGGGTaGGTCAGTGAGTTAGTAGAGAGTGAATGTGAAGGC +
Preference number: 6 (lower is better)
Translates to: MNGVCRAGRCSG*VSELVESECEG
Trigger: GCCTTCACATTCACTCTCTACTAACTCACTGACTCACCCAGAGCAACGTCCAGCCCTGCAAACTCCATTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550396.1
CDS GCA 72 bp GCTCAGCTCCCTGGACTGCAAGAATCAAGGCGGTCTTaGTGCAATTACCGCTCTTATTCCATCTCTGATTTG +
Preference number: 6 (lower is better)
Translates to: AQLPGLQESRRS*CNYRSYSISDL
Trigger: CAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 72 bp GTGGTGCTTAAGCTGATTCTTCAACAGGCCATTCCGTaGCTCTATCCGGCCGGCAATTGTTTACAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: VVLKLILQQAIP*LYPAGNCLQFW
Trigger: CCAGAACTGTAAACAATTGCCGGCCGGATAGAGCAACGGAATGGCCTGTTGAAGAATCAGCTTAAGCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp GCTGGTCTTCAACTCTTGGCTTCATGTGATCCTCTCTaGACTAGCTCCTCTGCTGGTCTTGTTGGCTTACCT +
Preference number: 6 (lower is better)
Translates to: AGLQLLASCDPL*TSSSAGLVGLP
Trigger: AGGTAAGCCAACAAGACCAGCAGAGGAGCTAGTCAAGAGAGGATCACATGAAGCCAAGAGTTGAAGACCAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 90 bp GGCGGTCTTGCTGCAATTACCGCTCTTATTCCATCTCTGATTTGTTaGCTTTTAAGGCCGACTAAAGACTTTTCCTCTCGCCTCACGTCG +
Preference number: 6 (lower is better)
Translates to: GGLAAITALIPSLIC*LLRPTKDFSSRLTS
Trigger: CGACGTGAGGCGAGAGGAAAAGTCTTTAGTCGGCCTTAAAAGCAAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGACCGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS TCA 72 bp CTCCCAGTATTTAGAATGATAAACCTGCCAGGATGGTaGCTGCTCTCGTTGCCTGATCCTTTGGCAGTAGAA +
Preference number: 6 (lower is better)
Translates to: LPVFRMINLPGW*LLSLPDPLAVE
Trigger: TTCTACTGCCAAAGGATCAGGCAACGAGAGCAGTCACCATCCTGGCAGGTTTATCATTCTAAATACTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 72 bp CAGCTCCCTGGACTGCAAGAATCAAGGCGGTCTTGCTaGAATTACCGCTCTTATTCCATCTCTGATTTGTTT +
Preference number: 6 (lower is better)
Translates to: QLPGLQESRRSC*NYRSYSISDLF
Trigger: AAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGCAAGACCGCCTTGATTCTTGCAGTCCAGGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS GCA 72 bp TGGCACCATCATACTGCATCTGTCAACAACCTCCTCTaGCTAGTTAGCTCCAACTCATTTGTTAAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: WHHHTASVNNLL*LVSSNSFVKAQ
Trigger: CTGAGCCTTAACAAATGAGTTGGAGCTAACTAGGCAGAGGAGGTTGTTGACAGATGCAGTATGATGGTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547919.1
CDS CAA 72 bp TCAACAGGCCATTCCGTTGCTCTATCCGGCCGGCAATaGTTTACAGTTCTGGGTGAAGTGTTATGTGAAAGA +
Preference number: 6 (lower is better)
Translates to: STGHSVALSGRQ*FTVLGEVLCER
Trigger: TCTTTCACATAACACTTCACCCAGAACTGTAAACAATTGCCGGCCGGATAGAGCAACGGAATGGCCTGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp CAAGGGCATACCAAGAGATGCCAAATACATTCCTTTTaGCCATCACTGTATAAGAGCAGCCTGACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: QGHTKRCQIHSF*PSLYKSSLTSS
Trigger: GGAGGAGGTCAGGCTGCTCTTATACAGTGATGGCAAAAAGGAATGTATTTGGCATCTCTTGGTATGCCCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 90 bp GCTGATTCTTCAACAGGCCATTCCGTTGCTCTATCCGGCCGGCAATaGTTTACAGTTCTGGGTGAAGTGTTATGTGAAAGAATCAGTGAA +
Preference number: 6 (lower is better)
Translates to: ADSSTGHSVALSGRQ*FTVLGEVLCERISE
Trigger: TTCACTGATTCTTTCACATAACACTTCACCCAGAACTGTAAACAATTGCCGGCCGGATAGAGCAACGGAATGGCCTGTTGAAGAATCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CCA 72 bp TCAAGGGCTCAATATTGGTCTCTGTTCCTGACAGGTTaGACATTTGGCAGCAGCAATAGCCAAATCACTGTT +
Preference number: 6 (lower is better)
Translates to: SRAQYWSLFLTG*TFGSSNSQITV
Trigger: AACAGTGATTTGGCTATTGCTGCTGCCAAATGTCCAACCTGTCAGGAACAGAGACCAATATTGAGCCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CCA 72 bp TCCTCCATGGATGATTCTATATCAAGGGCTCAATATTaGTCTCTGTTCCTGACAGGTTGGACATTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: SSMDDSISRAQY*SLFLTGWTFGS
Trigger: GCTGCCAAATGTCCAACCTGTCAGGAACAGAGACCAATATTGAGCCCTTGATATAGAATCATCCATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CCA 72 bp CCGTTGCTCTATCCGGCCGGCAATTGTTTACAGTTCTaGGTGAAGTGTTATGTGAAAGAATCAGTGAATCAC +
Preference number: 6 (lower is better)
Translates to: PLLYPAGNCLQF*VKCYVKESVNH
Trigger: GTGATTCACTGATTCTTTCACATAACACTTCACCCAGAACTGTAAACAATTGCCGGCCGGATAGAGCAACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp CCTCTTGCTGTGTCTCCTGGTGGAAATGCTCACCTTTaGGGAACAATACCTCTAAACCTACAAATCTCAGAG +
Preference number: 6 (lower is better)
Translates to: PLAVSPGGNAHL*GTIPLNLQISE
Trigger: CTCTGAGATTTGTAGGTTTAGAGGTATTGTTCCCAAAAGGTGAGCATTTCCACCAGGAGACACAGCAAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp CCTCCAACCCCTGTATCACAGGGAGATCAAACTCATTaGGATCTGGATATGGAAAAGGCTTTAGCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: PPTPVSQGDQTH*DLDMEKALARE
Trigger: TTCTCTGGCTAAAGCCTTTTCCATATCCAGATCCAAATGAGTTTGATCTCCCTGTGATACAGGGGTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549456.5
CDS TCA 72 bp CATAGGGTATTATTGTATCTAAGGTGGTGCTTAAGCTaGTTCTTCAACAGGCCATTCCGTTGCTCTATCCGG +
Preference number: 6 (lower is better)
Translates to: HRVLLYLRWCLS*FFNRPFRCSIR
Trigger: CCGGATAGAGCAACGGAATGGCCTGTTGAAGAATCAGCTTAAGCACCACCTTAGATACAATAATACCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CCA 72 bp TCTAAATTCGAGAAGCCTTCCACATTCCTTGGCTCATaGCCCCTTTATTCCATCTTCAAAGCCATTCTTCCA +
Preference number: 6 (lower is better)
Translates to: SKFEKPSTFLGS*PLYSIFKAILP
Trigger: TGGAAGAATGGCTTTGAAGATGGAATAAAGGGGCCATGAGCCAAGGAATGTGGAAGGCTTCTCGAATTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 90 bp AAAGTTGTGCAAGGGCATACCAAGAGATGCCAAATACATTCCTTTTaGCCATCACTGTATAAGAGCAGCCTGACCTCCTCCCAGTATTTA +
Preference number: 6 (lower is better)
Translates to: KVVQGHTKRCQIHSF*PSLYKSSLTSSQYL
Trigger: TAAATACTGGGAGGAGGTCAGGCTGCTCTTATACAGTGATGGCAAAAAGGAATGTATTTGGCATCTCTTGGTATGCCCTTGCACAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 90 bp TTTGAGGCTCAAGTTTGGCTCCTACGTCTCACAGAAACTGAGAGATaGAGTTGCTATCTCCCTGGATGTTTACATTTCAAAACGTTGGCT +
Preference number: 6 (lower is better)
Translates to: FEAQVWLLRLTETER*SCYLPGCLHFKTLA
Trigger: AGCCAACGTTTTGAAATGTAAACATCCAGGGAGATAGCAACTCAATCTCTCAGTTTCTGTGAGACGTAGGAGCCAAACTTGAGCCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549958.5
CDS TCA 72 bp TGTTCTCTTTCAGAGAGTGACTCTCCACCTGCTGTGTaGCCTTGGCATTTGATTTTTAAGCGACTCGATTTT +
Preference number: 6 (lower is better)
Translates to: CSLSESDSPPAV*PWHLIFKRLDF
Trigger: AAAATCGAGTCGCTTAAAAATCAAATGCCAAGGTCACACAGCAGGTGGAGAGTCACTCTCTGAAAGAGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 72 bp GTGCCCATTGTTCCAGCTTTGAGGATAGAAGCTTGTTaGTGCCAACCATTGGAGTCATTCTGTTTATTCAGT +
Preference number: 6 (lower is better)
Translates to: VPIVPALRIEAC*CQPLESFCLFS
Trigger: ACTGAATAAACAGAATGACTCCAATGGTTGGCATCAACAAGCTTCTATCCTCAAAGCTGGAACAATGGGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp GCTGCAATTACCGCTCTTATTCCATCTCTGATTTGTTaGCTTTTAAGGCCGACTAAAGACTTTTCCTCTCGC +
Preference number: 6 (lower is better)
Translates to: AAITALIPSLIC*LLRPTKDFSSR
Trigger: GCGAGAGGAAAAGTCTTTAGTCGGCCTTAAAAGCAAACAAATCAGAGATGGAATAAGAGCGGTAATTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416284.8
CDS CAA 72 bp TCTTGTGCCCATTGTTCCAGCTTTGAGGATAGAAGCTaGTTGATGCCAACCATTGGAGTCATTCTGTTTATT +
Preference number: 6 (lower is better)
Translates to: SCAHCSSFEDRS*LMPTIGVILFI
Trigger: AATAAACAGAATGACTCCAATGGTTGGCATCAACAAGCTTCTATCCTCAAAGCTGGAACAATGGGCACAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp AGAGCAAACTTCTCATCTCTTTATGACAAGGTGATTTaGAGGCTCAAGTTTGGCTCCTACGTCTCACAGAAA +
Preference number: 6 (lower is better)
Translates to: RANFSSLYDKVI*RLKFGSYVSQK
Trigger: TTTCTGTGAGACGTAGGAGCCAAACTTGAGCCTCAAAATCACCTTGTCATAAAGAGATGAGAAGTTTGCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549958.5
CDS CAA 90 bp ACCACCTCTACTTCTACATTTGATTCCCATATCCATAAATTCTATTaGCTGGGAACACAGCAACATATGCTGGCCATTGATTCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: TTSTSTFDSHIHKFY*LGTQQHMLAIDSEG
Trigger: ACCCTCTGAATCAATGGCCAGCATATGTTGCTGTGTTCCCAGCAAATAGAATTTATGGATATGGGAATCAAATGTAGAAGTAGAGGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 90 bp GAGATCAAACACTCCATAAGTATGGTGGAAGCAGCTGAAGCACTATaGGCAGGAAAGGAAAATCCATACCTGAAATATGTGTCAATTCTA +
Preference number: 6 (lower is better)
Translates to: EIKHSISMVEAAEAL*AGKENPYLKYVSIL
Trigger: TAGAATTGACACATATTTCAGGTATGGATTTTCCTTTCCTGCCAATAGTGCTTCAGCTGCTTCCACCATACTTATGGAGTGTTTGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 72 bp GAAACTCTTAATCTTTTAACCTCTCCACCTGCTGTGTaGCCTTGGCATTTGATTTTTAAGCGACTCGATTTT +
Preference number: 6 (lower is better)
Translates to: ETLNLLTSPPAV*PWHLIFKRLDF
Trigger: AAAATCGAGTCGCTTAAAAATCAAATGCCAAGGTCACACAGCAGGTGGAGAGGTTAAAAGATTAAGAGTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549456.5
CDS TCA 72 bp GTAGTTAGGGCTACACCTGTTATTATATATTGGAGCTaGGATTCAAACCAGATCTATCTAAAGTCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: VVRATPVIIYWS*DSNQIYLKSEP
Trigger: TGGCTCTGACTTTAGATAGATCTGGTTTGAATCTCAGCTCCAATATATAATAACAGGTGTAGCCCTAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000549456.5
CDS GCA 72 bp TTTACTGTCAAAGTTGTGCAAGGGCATACCAAGAGATaGCAAATACATTCCTTTTTGCCATCACTGTATAAG +
Preference number: 6 (lower is better)
Translates to: FTVKVVQGHTKR*QIHSFLPSLYK
Trigger: CTTATACAGTGATGGCAAAAAGGAATGTATTTGGCATCTCTTGGTATGCCCTTGCACAACTTTGACAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 72 bp TTGGCATTGAATTTACACGTCTATATCCAGTTAACCTaGTGCCTTGAGCATGGTGCAAGTGAAGAAAATATT +
Preference number: 6 (lower is better)
Translates to: LALNLHVYIQLT*CLEHGASEENI
Trigger: AATATTTTCTTCACTTGCACCATGCTCAAGGCAGCAGGTTAACTGGATATAGACGTGTAAATTCAATGCCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547941.1
CDS CCA 72 bp GAGACAGAAAGTAGAATAGAGATTACCAGGAGCTTTTaGCTGGTCAGTAGACAGTTAAAAAGTGAGGATTTT +
Preference number: 6 (lower is better)
Translates to: ETESRIEITRSF*LVSRQLKSEDF
Trigger: AAAATCCTCACTTTTTAACTGTCTACTGACCAGCCAAAAGCTCCTGGTAATCTCTATTCTACTTTCTGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548780.1
CDS GCA 72 bp CTTCTACATTTGATTCCCATATCCATAAATTCTATTTaGTGGGAACACAGCAACATATGCTGGCCATTGATT +
Preference number: 6 (lower is better)
Translates to: LLHLIPISINSI*WEHSNICWPLI
Trigger: AATCAATGGCCAGCATATGTTGCTGTGTTCCCAGCAAATAGAATTTATGGATATGGGAATCAAATGTAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 72 bp GCATTGAATTTACACGTCTATATCCAGTTAACCTGCTaGCTTGAGCATGGTGCAAGTGAAGAAAATATTATT +
Preference number: 6 (lower is better)
Translates to: ALNLHVYIQLTC*LEHGASEENII
Trigger: AATAATATTTTCTTCACTTGCACCATGCTCAAGGCAGCAGGTTAACTGGATATAGACGTGTAAATTCAATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547941.1
CDS GCA 72 bp GCCAGAGAACTTTTTCTAGATTATCCAACATTAGACTaGATGCCTTTTGCAGTATACAGTGATGTACATCTT +
Preference number: 6 (lower is better)
Translates to: ARELFLDYPTLD*MPFAVYSDVHL
Trigger: AAGATGTACATCACTGTATACTGCAAAAGGCATGCAGTCTAATGTTGGATAATCTAGAAAAAGTTCTCTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000549456.5
CDS TCA 72 bp TATCATGTGCTAAAAATCAAGGTTTTAGCAAGGCTCTaGTCCTTTCTGGAGGCTTTAACAGAGAATTCATTT +
Preference number: 6 (lower is better)
Translates to: YHVLKIKVLARL*SFLEALTENSF
Trigger: AAATGAATTCTCTGTTAAAGCCTCCAGAAAGGATCAGAGCCTTGCTAAAACCTTGATTTTTAGCACATGATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS TCA 72 bp TCCAACATTAGACTGCATGCCTTTTGCAGTATACAGTaGTGTACATCTTTGTTTCACATAGTAAACATCCAT +
Preference number: 6 (lower is better)
Translates to: SNIRLHAFCSIQ*CTSLFHIVNIH
Trigger: ATGGATGTTTACTATGTGAAACAAAGATGTACATCACTGTATACTGCAAAAGGCATGCAGTCTAATGTTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547919.1
ENST00000549456.5
CDS GCA 72 bp TGTTATGTGAAAGAATCAGTGAATCACATGGTCACGTaGTCACTACCACATCTCTTTTGCAATAAAATGAAT +
Preference number: 6 (lower is better)
Translates to: CYVKESVNHMVT*SLPHLFCNKMN
Trigger: ATTCATTTTATTGCAAAAGAGATGTGGTAGTGAGCACGTGACCATGTGATTCACTGATTCTTTCACATAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS GCA 72 bp ATCAATACTTTACTAGTCAATTTACTGTCAAAGTTGTaGAAGGGCATACCAAGAGATGCCAAATACATTCCT +
Preference number: 6 (lower is better)
Translates to: INTLLVNLLSKL*KGIPRDAKYIP
Trigger: AGGAATGTATTTGGCATCTCTTGGTATGCCCTTGCACAACTTTGACAGTAAATTGACTAGTAAAGTATTGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1
CDS CAA 72 bp GTCATCAATACTTTACTAGTCAATTTACTGTCAAAGTaGTGCAAGGGCATACCAAGAGATGCCAAATACATT +
Preference number: 6 (lower is better)
Translates to: VINTLLVNLLSK*CKGIPRDAKYI
Trigger: AATGTATTTGGCATCTCTTGGTATGCCCTTGCACAACTTTGACAGTAAATTGACTAGTAAAGTATTGATGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000500610.1