Pregenerated sensors for TAF9 (Homo sapiens)
Ensembl gene IDs: ENSG00000273841, ENSG00000276463Ensembl transcript IDs: ENST00000328663.8, ENST00000503245.5, ENST00000506736.1, ENST00000508954.3, ENST00000615404.1, ENST00000616867.1, ENST00000617893.4, ENST00000622236.4, ENST00000622801.4
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGATGCCTAAGTCACACACTCCTTCGGTGGTCCCCGCCCTTCGCTTaGGCCGACCAGTCTGGAAGGTCCCCGGGAGGCCGTACCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: GCLSHTLLRWSPPFA*ADQSGRSPGGRTSE Trigger: CTCGGAGGTACGGCCTCCCGGGGACCTTCCAGACTGGTCGGCGCAAGCGAAGGGCGGGGACCACCGAAGGAGTGTGTGACTTAGGCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328663.8 ENST00000615404.1 |
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| CDS TCA 90 bp | ACCCCTGGTGTACCTGTAAGACAAGCCACAGAAAAATACTGTTTGTaGAATACTACTTATCACACTGCGGTCCACCTTCTGCCTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: TPGVPVRQATEKYCL*NTTYHTAVHLLPFL Trigger: AAGGAAAGGCAGAAGGTGGACCGCAGTGTGATAAGTAGTATTTCACAAACAGTATTTTTCTGTGGCTTGTCTTACAGGTACACCAGGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506736.1 ENST00000616867.1 |
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| CDS TCA 72 bp | TCCCGCAACGCCCGCGAGGGTCGGCTCCCGGGGCGCTaGCAACCGCCTCGTGGCCCTCGGCCGGCCTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SRNAREGRLPGR*QPPRGPRPASE Trigger: TTCAGAGGCCGGCCGAGGGCCACGAGGCGGTTGTCAGCGCCCCGGGAGCCGACCCTCGCGGGCGTTGCGGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503245.5 ENST00000508954.3 ENST00000622236.4 |
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| CDS CAA 72 bp | GCCGCGACGGCTTCGGGCGCCTCGCTCACGTGCCCTTaGCTCTACAGGGAGGAGCCGGAAGGGGCGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AATASGASLTCP*LYREEPEGAGG Trigger: GCCGCCCGCCCCTTCCGGCTCCTCCCTGTAGAGCAAAGGGCACGTGAGCGAGGCGCCCGAAGCCGTCGCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617893.4 |
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| CDS GCA 72 bp | CCGCGACGGCTTCGGGCGCCTCGCTCACGTGCCCTTTaGTCTACAGGGAGGAGCCGGAAGGGGCGGGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRRLRAPRSRAL*STGRSRKGRAA Trigger: TGCCGCCCGCCCCTTCCGGCTCCTCCCTGTAGAGCAAAGGGCACGTGAGCGAGGCGCCCGAAGCCGTCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000617893.4 |
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| CDS GCA 72 bp | GTCCCCGCCGCGACGGCTTCGGGCGCCTCGCTCACGTaGCCTTTGCTCTACAGGGAGGAGCCGGAAGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VPAATASGASLT*PLLYREEPEGA Trigger: CGCCCCTTCCGGCTCCTCCCTGTAGAGCAAAGGGCACGTGAGCGAGGCGCCCGAAGCCGTCGCGGCGGGGAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000617893.4 |
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| CDS TCA 72 bp | GTCCCCGGGAGGCCGTACCTCCGAGAGGCTCGGCGTTaGGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCACC | + |
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Preference number: 6 (lower is better) Translates to: VPGRPYLREARR*ARVGPGGCPFT Trigger: GGTGAAAGGGCAGCCACCTGGCCCTACCCGGGCTCAACGCCGAGCCTCTCGGAGGTACGGCCTCCCGGGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328663.8 ENST00000615404.1 |
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| CDS CAA 72 bp | GGTCCCCGGGAGGCCGTACCTCCGAGAGGCTCGGCGTaGAGCCCGGGTAGGGCCAGGTGGCTGCCCTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GPREAVPPRGSA*SPGRARWLPFH Trigger: GTGAAAGGGCAGCCACCTGGCCCTACCCGGGCTCAACGCCGAGCCTCTCGGAGGTACGGCCTCCCGGGGACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000328663.8 ENST00000615404.1 |
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| CDS CAA 72 bp | AAGTCACACACTCCTTCGGTGGTCCCCGCCCTTCGCTaGCGCCGACCAGTCTGGAAGGTCCCCGGGAGGCCG | + |
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Preference number: 6 (lower is better) Translates to: KSHTPSVVPALR*RRPVWKVPGRP Trigger: CGGCCTCCCGGGGACCTTCCAGACTGGTCGGCGCAAGCGAAGGGCGGGGACCACCGAAGGAGTGTGTGACTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000328663.8 ENST00000615404.1 |
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| CDS TCA 72 bp | AAAAGCATACAGCAATTTCGTCACGTCACAAACATCTaGACTCGTTTACCGAAATCTAATCTGAGGCGTTTA | + |
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Preference number: 6 (lower is better) Translates to: KSIQQFRHVTNI*TRLPKSNLRRL Trigger: TAAACGCCTCAGATTAGATTTCGGTAAACGAGTTCAGATGTTTGTGACGTGACGAAATTGCTGTATGCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508954.3 ENST00000622801.4 |
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