RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAF6L (Homo sapiens)

Ensembl gene IDs: ENSG00000162227

Ensembl transcript IDs: ENST00000294168.8, ENST00000524976.5, ENST00000525405.5, ENST00000526261.1, ENST00000529509.1, ENST00000531265.1, ENST00000532915.1, ENST00000533823.1

Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATaGGCAGTGCCTCCTGTGATCCGTAACCACACACAGCCTCCACGC +
Preference number: 1 (lower is better)
Translates to: LDPQESRVHPPWRGA*AVPPVIRNHTQPPR
Trigger: GCGTGGAGGCTGTGTGTGGTTACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
3UTR CCA 90 bp CCAGGTTCACCTCTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTaGCGGGGCGCATGGGCAGTGCCTCCTGTGATCCGTAACCACACA +
Preference number: 1 (lower is better)
Translates to: PGSPLDPQESRVHPP*RGAWAVPPVIRNHT
Trigger: TGTGTGGTTACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGGTGAACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
3UTR CCA 72 bp CCTCTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTaGCGGGGCGCATGGGCAGTGCCTCCTGTGATCCGT +
Preference number: 3 (lower is better)
Translates to: PLDPQESRVHPP*RGAWAVPPVIR
Trigger: ACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
3UTR CCA 72 bp CAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATaGGCAGTGCCTCCTGTGATCCGTAACCACACACAG +
Preference number: 3 (lower is better)
Translates to: QESRVHPPWRGA*AVPPVIRNHTQ
Trigger: CTGTGTGTGGTTACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp AGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCTCCTGTGATCCGTCCGTGCTCTCCGCCATaGGCCGGACAGACTCCCGAG +
Preference number: 4 (lower is better)
Translates to: SRVHPPWRGAWAVPPVIRPCSPP*AGQTPE
Trigger: CTCGGGAGTCTGTCCGGCTCATGGCGGAGAGCACGG...ACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR CCA 90 bp CTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCTCCTGAGAGTTCACCCTCCCTaGCGGGGCGCATGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LRKVEFTLPGGAHGQCLLRVHPP*RGAWAV
Trigger: CACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCT...CAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp TCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCCGCTCTTCTCGCTCTaGCATGGCCCCAGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SILRKVEFTLPGGAHGQCPLFSL*HGPSGA
Trigger: AGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGG...GCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR GCA 90 bp ATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCTCATAGCACACGTCCTCTaGGAGCAGCGCCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: ILRKVEFTLPGGAHGQCLIAHVL*EQRRHL
Trigger: GAGGTGGCGGCGCTGCTCGCAGAGGACGTGTGCTAT...GAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp GTGAAGACACAGCACTGGGCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATTGGCCCCAGTGGAGCTaGAGACCCCGGCGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: VKTQHWAPILEVPGSLCHWPQWS*RPRRGE
Trigger: TTCGCCACGCCGGGGTCTTCAGCTCCACTGGGGCCA...ATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGCCCAGTGCTGTGTCTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR CCA 90 bp GCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGAACCCTGGCGGGGCGCATaGGCAGTGCCTCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: APILEVPGSLCHPGRRHEPWRGA*AVPPVI
Trigger: GATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGG...TTCATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp GGGCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGGGGCAGTGCCTCCTGTaGTCCGTAACCACACACAGC +
Preference number: 4 (lower is better)
Translates to: GHRSLRCQVPFAIQVGDMGQCLL*SVTTHS
Trigger: GCTGTGTGTGGTTACGGATCACAGGAGGCACTGCCC...CATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp GGGCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGCTGGGCACCGATCCTTaGGGTGCCAGGTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GHRSLRCQVPFAIQVGDMLGTDP*GARFPL
Trigger: CAAAGGGAACCTGGCACCTCAAGGATCGGTGCCCAG...CATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR GCA 90 bp TCACCTCTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGCACCGATCCTTGAGGTaGCAGGTTCCCTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: SPLDPQESRVHPPWRGAWHRSLR*QVPFAI
Trigger: GATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTG...CCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR CCA 90 bp GACAGCTGTCTCAGCACAGCCTTTGGGGATGTTGGTAGCCAGGGCCAGCTCCACGTGAAGACACAGCACTaGGCACCGATCCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DSCLSTAFGDVGSQGQLHVKTQH*APILEV
Trigger: CACCTCAAGGATCGGTGCCCAGTGCTGTGTCTTCAC...GTGGAGCTGGCCCTGGCTACCAACATCCCCAAAGGCTGTGCTGAGACAGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp ACACAGCACTGGGCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTGTTTGGTGTGCTTCATaGACTGAGAGCTGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: TQHWAPILEVPGSLCHPGVWCAS*TESCVA
Trigger: GGCCACGCAGCTCTCAGTTCATGAAGCACACCAAAC...ACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGCCCAGTGCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR CCA 90 bp CCACCAGGTTCACCTCTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGAACTGAGAGCTGCGTaGCCTCTCTCAGACGATAGC +
Preference number: 4 (lower is better)
Translates to: PPGSPLDPQESRVHPPWRELRAA*PLSDDS
Trigger: GCTATCGTCTGAGAGAGGCCACGCAGCTCTCAGTTC...CCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGGTGAACCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR GCA 90 bp ACTCTGACAGCTGTCTCAGCACAGCCTTTGGGGATGTTGGTAGCCAGGGCCAGCGTGCCAGGTTCCCTTTaGCATCCAGGTAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: TLTAVSAQPLGMLVARASVPGSL*HPGRRH
Trigger: ATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCAC...GCTGGCCCTGGCTACCAACATCCCCAAAGGCTGTGCTGAGACAGCTGTCAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS-3UTR TCA 90 bp TGGGCACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATAGGAGACATGAACTCTaGCAGCTGTCTCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: WAPILEVPGSLCHPGRRHRRHEL*QLSQHS
Trigger: GCTGTGCTGAGACAGCTGTCAGAGTTCATGTCTCCT...ATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS GCA 90 bp GGCGCTTGCCGTCAGCTGCGGCATCTTCCGCACCGAGTCCGGGGCTaGCGCCGGCTCCTTCTTGTCCCCGGGCGGCCGCGGAGCCGTGGG +
Preference number: 5 (lower is better)
Translates to: GACRQLRHLPHRVRG*RRLLLVPGRPRSRG
Trigger: CCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCCGGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACGGCAAGCGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 90 bp GGCCGCCTCCGCCGCTGCCCCGGGGGCTCTCGTCGCCGTGCGGGCTaGCTATGGCGCTTGCCGTCAGCTGCGGCATCTTCCGCACCGAGT +
Preference number: 5 (lower is better)
Translates to: GRLRRCPGGSRRRAG*LWRLPSAAASSAPS
Trigger: ACTCGGTGCGGAAGATGCCGCAGCTGACGGCAAGCGCCATAGTCAGCCCGCACGGCGACGAGAGCCCCCGGGGCAGCGGCGGAGGCGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 90 bp GGGCTGCCGCCGGCTCCTTCTTGTCCCCGGGCGGCCGCGGAGCCGTaGGTGCAGGCTGGCCGGTGCCAAAGCGTGTGGCCAAGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: GLPPAPSCPRAAAEP*VQAGRCQSVWPSCH
Trigger: GTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCCGGCGGCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp TGCCGCCGGCTCCTTCTTGTCCCCGGGCGGCCGCGGAGCCGTGGGTaGAGGCTGGCCGGTGCCAAAGCGTGTGGCCAAGCTGTCACCGAA +
Preference number: 5 (lower is better)
Translates to: CRRLLLVPGRPRSRG*RLAGAKACGQAVTE
Trigger: TTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCCGGCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp GGGCTCTCGTCGCCGTGCGGGCTGACTATGGCGCTTGCCGTCAGCTaGGGCATCTTCCGCACCGAGTCCGGGGCTGCCGCCGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLSSPCGLTMALAVS*GIFRTESGAAAGSF
Trigger: GAAGGAGCCGGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACGGCAAGCGCCATAGTCAGCCCGCACGGCGACGAGAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 90 bp GGCTCCTTCTTGTCCCCGGGCGGCCGCGGAGCCGTGGGTGCAGGCTaGCCGGTGCCAAAGCGTGTGGCCAAGCTGTCACCGAAGAAGGCG +
Preference number: 5 (lower is better)
Translates to: GSFLSPGGRGAVGAG*PVPKRVAKLSPKKA
Trigger: CGCCTTCTTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp AGAGAAGGCTGTCCCATGGCAGGTCGTCCAGGCGCCGGCACCCCCTaGCACCTGGGCCACCCCTGTTGGGCTCTGCTGCCTGGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: REGCPMAGRPGAGTP*HLGHPCWALLPGPS
Trigger: TGAAGGCCCAGGCAGCAGAGCCCAACAGGGGTGGCCCAGGTGGCAGGGGGTGCCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp CGCGCCCCCTGGCGGCAGCGGGAGGCCGGACCCAAAGCTGGGTTCTaGACCGCCCCCGGAGGACGACTCTTGAAAGAGAAGGCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: RAPWRQREAGPKAGF*TAPGGRLLKEKAVP
Trigger: TGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGGCCTCCCGCTGCCGCCAGGGGGCGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 90 bp TGCACCGCCCCCGGAGGACGACTCTTGAAAGAGAAGGCTGTCCCATaGCAGGTCGTCCAGGCGCCGGCACCCCCTGCCACCTGGGCCACC +
Preference number: 5 (lower is better)
Translates to: CTAPGGRLLKEKAVP*QVVQAPAPPATWAT
Trigger: GGTGGCCCAGGTGGCAGGGGGTGCCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 90 bp AGTACAGCGAGTAGTCCGAGAGCGCCCACCGGCGGGCGGGGCGGCTaGTACGGCCGATCATGGGCAGTTTCTGCACGTAGCGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: STASSPRAPTGGRGG*YGRSWAVSARSARP
Trigger: CGGCCTCGCGCTACGTGCAGAAACTGCCCATGATCGGCCGTACCAGCCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTACTCGCTGTACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp TCTTGTCCCCGGGCGGCCGCGGAGCCGTGGGTGCAGGCTGGCCGGTaGCAAAGCGTGTGGCCAAGCTGTCACCGAAGAAGGCGTAGAGCT +
Preference number: 5 (lower is better)
Translates to: SCPRAAAEPWVQAGR*QSVWPSCHRRRRRA
Trigger: AGCTCTACGCCTTCTTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 90 bp CCACAAACCGCCGCTCTTCTCGCTCTGACATGGCCCCAGTGGAGCTaGAGACCCCGGCGTGGCGAAGGCTGCTACCGAGACGACGGCGGC +
Preference number: 5 (lower is better)
Translates to: PQTAALLALTWPQWS*RPRRGEGCYRDDGG
Trigger: GCCGCCGTCGTCTCGGTAGCAGCCTTCGCCACGCCGGGGTCTTCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000525405.5
ENST00000532915.1
CDS TCA 90 bp GCGCCGCCACCTCATCGCTCAGCTCCAGGCCCGTGCTCTCCGCCATaGGCCGGACAGACTCCCGAGGGATCTCCACAAACCGCCGCTCTT +
Preference number: 5 (lower is better)
Translates to: APPPHRSAPGPCSPP*AGQTPEGSPQTAAL
Trigger: AAGAGCGGCGGTTTGTGGAGATCCCTCGGGAGTCTGTCCGGCTCATGGCGGAGAGCACGGGCCTGGAGCTGAGCGATGAGGTGGCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000525405.5
ENST00000526261.1
ENST00000529509.1
ENST00000532915.1
CDS CCA 90 bp GCGGCCGCGGAGCCGTGGGTGCAGGCTGGCCGGTGCCAAAGCGTGTaGCCAAGCTGTCACCGAAGAAGGCGTAGAGCTCCCGGTAGATGT +
Preference number: 5 (lower is better)
Translates to: AAAEPWVQAGRCQSV*PSCHRRRRRAPGRC
Trigger: ACATCTACCGGGAGCTCTACGCCTTCTTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 90 bp CCGGACCCAAAGCTGGGTTCTGCACCGCCCCCGGAGGACGACTCTTaGAAGAGAAGGCTGTCCCATGGCAGGTCGTCCAGGCGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PDPKLGSAPPPEDDS*KRRLSHGRSSRRRH
Trigger: GTGCCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 90 bp GACAGACTCCCGAGGGATCTCCACAAACCGCCGCTCTTCTCGCTCTaGCATGGCCCCAGTGGAGCTGAAGACCCCGGCGTGGCGAAGGCT +
Preference number: 5 (lower is better)
Translates to: DRLPRDLHKPPLFSL*HGPSGAEDPGVAKA
Trigger: AGCCTTCGCCACGCCGGGGTCTTCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGGAGATCCCTCGGGAGTCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000525405.5
ENST00000532915.1
CDS TCA 90 bp GGAGGGCAGCCCCATCCCGCAGAGTCCAGTGGTCATTCAGGGGGTTaGTGGAGGCAGCCAGTGGCTCCAGGACACAGTAGAGGACACTGC +
Preference number: 5 (lower is better)
Translates to: GGQPHPAESSGHSGG*WRQPVAPGHSRGHC
Trigger: GCAGTGTCCTCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCCCTGAATGACCACTGGACTCTGCGGGATGGGGCTGCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS-3UTR CAA 90 bp ATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCTCCAGCCTTTGGGGATGTaGGTAGCCAGGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ILRKVEFTLPGGAHGQCLQPLGM*VARASS
Trigger: GGAGCTGGCCCTGGCTACCAACATCCCCAAAGGCTG...GAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS TCA 90 bp ACCAGCCTTGCTGCTCGTGCTCTGGAGTTTCTAAACAAGGAGCTCTaGAGACCCCGGCGTGGCGAAGGCTGCTACCGAGACGACGGCGGC +
Preference number: 5 (lower is better)
Translates to: TSLAARALEFLNKEL*RPRRGEGCYRDDGG
Trigger: GCCGCCGTCGTCTCGGTAGCAGCCTTCGCCACGCCGGGGTCTTCAGAGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGCAAGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS GCA 90 bp CCTCTGCCAGACGGACTCCTGAGAGCTTCAGGCTCTGTGAAGCTCTaGTCAGCATACCCTGGGGGTGAAACACCGCCCCAGCATGCTGCC +
Preference number: 5 (lower is better)
Translates to: PLPDGLLRASGSVKL*SAYPGGETPPQHAA
Trigger: GGCAGCATGCTGGGGCGGTGTTTCACCCCCAGGGTATGCTGAGCAGAGCTTCACAGAGCCTGAAGCTCTCAGGAGTCCGTCTGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS CCA 90 bp CCGCAGAGTCCAGTGGTCATTCAGGGGGTTGATGGAGGCAGCCAGTaGCTCCAGGACACAGTAGAGGACACTGCCCACCAGACAGCGGAC +
Preference number: 5 (lower is better)
Translates to: PQSPVVIQGVDGGSQ*LQDTVEDTAHQTAD
Trigger: GTCCGCTGTCTGGTGGGCAGTGTCCTCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCCCTGAATGACCACTGGACTCTGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS CCA 90 bp AAGATGTGGCTGAGCAGGAGGGCAGCCCCATCCCGCAGAGTCCAGTaGTCATTCAGGGGGTTGATGGAGGCAGCCAGTGGCTCCAGGACA +
Preference number: 5 (lower is better)
Translates to: KMWLSRRAAPSRRVQ*SFRGLMEAASGSRT
Trigger: TGTCCTGGAGCCACTGGCTGCCTCCATCAACCCCCTGAATGACCACTGGACTCTGCGGGATGGGGCTGCCCTCCTGCTCAGCCACATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS CCA 90 bp AGCAATCCCACCCGCAGGTTTAGGCCCAGTGGCTACCAGAAGATGTaGCTGAGCAGGAGGGCAGCCCCATCCCGCAGAGTCCAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SNPTRRFRPSGYQKM*LSRRAAPSRRVQWS
Trigger: TGACCACTGGACTCTGCGGGATGGGGCTGCCCTCCTGCTCAGCCACATCTTCTGGTAGCCACTGGGCCTAAACCTGCGGGTGGGATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524976.5
CDS-3UTR CAA 90 bp AGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGGCAGTGCCTCCTGTGATCCGTCATCTGAGGGCCCTGTaGAAGTCCTCAACCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRVHPPWRGAWAVPPVIRHLRAL*KSSTVS
Trigger: GCTGACGGTTGAGGACTTCAACAGGGCCCTCAGATG...ACGGATCACAGGAGGCACTGCCCATGCGCCCCGCCAGGGAGGGTGAACTCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS TCA 90 bp ATCCCACCCGCAGGTTTAGGCCCAGTGGCTACCAGAAGATGTGGCTaGGCAGGAGGGCAGCCCCATCCCGCAGAGTCCAGTGGTCATTCA +
Preference number: 5 (lower is better)
Translates to: IPPAGLGPVATRRCG*AGGQPHPAESSGHS
Trigger: TGAATGACCACTGGACTCTGCGGGATGGGGCTGCCCTCCTGCTCAGCCACATCTTCTGGTAGCCACTGGGCCTAAACCTGCGGGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524976.5
CDS CCA 90 bp CCACAAACCGCCGCTCTTCTCGCTCTGACATGGCCCCAGTGGAGCTaGGAGTGGAGAATGAAGACTGGAAAAGCTGCCCAGCCTCCCGGA +
Preference number: 5 (lower is better)
Translates to: PQTAALLALTWPQWS*EWRMKTGKAAQPPG
Trigger: TCCGGGAGGCTGGGCAGCTTTTCCAGTCTTCATTCTCCACTCCCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS GCA 90 bp AGCCAGAGGCTTCGCCCCATTTCCTTACCCCAACCCACTTGGCTCTaGAGCAATCCCACCCGCAGGTTTAGGCCCAGTGGCTACCAGAAG +
Preference number: 5 (lower is better)
Translates to: SQRLRPISLPQPTWL*SNPTRRFRPSGYQK
Trigger: CTTCTGGTAGCCACTGGGCCTAAACCTGCGGGTGGGATTGCTGCAGAGCCAAGTGGGTTGGGGTAAGGAAATGGGGCGAAGCCTCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524976.5
CDS-3UTR CAA 90 bp TCACCTCTCGATCCTCAGGAAAGTAGAGTTCACCCTCCCTGGCGGGGCGCATGGACTGGGCACCGATCCTaGAGGTGCCAGGTTCCCTTT +
Preference number: 5 (lower is better)
Translates to: SPLDPQESRVHPPWRGAWTGHRS*RCQVPF
Trigger: AAAGGGAACCTGGCACCTCAAGGATCGGTGCCCAGT...CCATGCGCCCCGCCAGGGAGGGTGAACTCTACTTTCCTGAGGATCGAGAGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS GCA 90 bp GGCCCCAAGCACAGGTGCGGATTACGAAATAGGCTCCGTGCCACCTaGAGCAGCCGGTGCAGTTGCTCCAGGTCATGGCTTACAGATTTC +
Preference number: 5 (lower is better)
Translates to: GPKHRCGLRNRLRAT*SSRCSCSRSWLTDF
Trigger: GAAATCTGTAAGCCATGACCTGGAGCAACTGCACCGGCTGCTGCAGGTGGCACGGAGCCTATTTCGTAATCCGCACCTGTGCTTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS CCA 90 bp GGATCTCCACAAACCGCCGCTCTTCTCGCTCTGACATGGCCCCAGTaGAGCTGGGAGTGGAGAATGAAGACTGGAAAAGCTGCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GSPQTAALLALTWPQ*SWEWRMKTGKAAQP
Trigger: AGGCTGGGCAGCTTTTCCAGTCTTCATTCTCCACTCCCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGGAGATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS TCA 90 bp CAGGACAACCAGGGCAAGAGACTGCTCTTAGAGCCTGCTCAGCCCTaGCCATCTAGGCTCTGCACACCTCTGTGCTCTGTCCTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: QDNQGKRLLLEPAQP*PSRLCTPLCSVLSS
Trigger: GGAAGACAGGACAGAGCACAGAGGTGTGCAGAGCCTAGATGGTCAGGGCTGAGCAGGCTCTAAGAGCAGTCTCTTGCCCTGGTTGTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS GCA 90 bp AGGTGCGGATTACGAAATAGGCTCCGTGCCACCTGCAGCAGCCGGTaGAGTTGCTCCAGGTCATGGCTTACAGATTTCACCCCACTGACC +
Preference number: 5 (lower is better)
Translates to: RCGLRNRLRATCSSR*SCSRSWLTDFTPLT
Trigger: GGTCAGTGGGGTGAAATCTGTAAGCCATGACCTGGAGCAACTGCACCGGCTGCTGCAGGTGGCACGGAGCCTATTTCGTAATCCGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS GCA 90 bp GGAGAGCCCAGGAGTGTGATCCAACACCCTCCACACCAGCCTTGCTaGTCGTGCTCTGGAGTTTCTAAACAAGGAGCTCTGAAGACCCCG +
Preference number: 5 (lower is better)
Translates to: GEPRSVIQHPPHQPC*SCSGVSKQGALKTP
Trigger: CGGGGTCTTCAGAGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGCAAGGCTGGTGTGGAGGGTGTTGGATCACACTCCTGGGCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS GCA 90 bp CCCGGAGAGCCCAGGAGTGTGATCCAACACCCTCCACACCAGCCTTaGTGCTCGTGCTCTGGAGTTTCTAAACAAGGAGCTCTGAAGACC +
Preference number: 5 (lower is better)
Translates to: PGEPRSVIQHPPHQP*CSCSGVSKQGALKT
Trigger: GGTCTTCAGAGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGCAAGGCTGGTGTGGAGGGTGTTGGATCACACTCCTGGGCTCTCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS-3UTR CAA 90 bp CACCGATCCTTGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGAACGTCTCAGCACAGCCTTaGGGGATGTTGGTAGCCAGG +
Preference number: 5 (lower is better)
Translates to: HRSLRCQVPFAIQVGDMNVSAQP*GMLVAR
Trigger: CCTGGCTACCAACATCCCCAAAGGCTGTGCTGAGAC...GTTCATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525405.5
CDS TCA 90 bp TCCCCCTCAACCACCATCCCCACACACATCCACAAGAAGCCTTTCTaGCAGGACAACCAGGGCAAGAGACTGCTCTTAGAGCCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: SPSTTIPTHIHKKPF*QDNQGKRLLLEPAQ
Trigger: CTGAGCAGGCTCTAAGAGCAGTCTCTTGCCCTGGTTGTCCTGTCAGAAAGGCTTCTTGTGGATGTGTGTGGGGATGGTGGTTGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531265.1
CDS GCA 90 bp AGGCAGGAGTGCCCCAATCTTGGAGTTCGTCTGCAAGTCCTGGAGTaGAACCTAAAAGGAAGGGCCCAGACTGCATTGGATCCACCAGAA +
Preference number: 5 (lower is better)
Translates to: RQECPNLGVRLQVLE*NLKGRAQTALDPPE
Trigger: TTCTGGTGGATCCAATGCAGTCTGGGCCCTTCCTTTTAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533823.1
CDS CCA 90 bp ATCATCCAGCACAGCCTGCAAGTTTGTCCAGTAGGTGGACAGGTGTaGGTACAGGACTCGTTCTACTGCCTTCCAGCCAAGAGCATGCAG +
Preference number: 5 (lower is better)
Translates to: IIQHSLQVCPVGGQV*VQDSFYCLPAKSMQ
Trigger: CTGCATGCTCTTGGCTGGAAGGCAGTAGAACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAACTTGCAGGCTGTGCTGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp CCAAAGAGCCTGTTTCCTACATCACCCCTTACCCGATCCTTGAGGTaGCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGAACTCTGAC +
Preference number: 5 (lower is better)
Translates to: PKSLFPTSPLTRSLR*QVPFAIQVGDMNSD
Trigger: GTCAGAGTTCATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGGTAAGGGGTGATGTAGGAAACAGGCTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS CCA 90 bp ATACTGAATAATCATCCAGCACAGCCTGCAAGTTTGTCCAGTAGGTaGACAGGTGTGGGTACAGGACTCGTTCTACTGCCTTCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: ILNNHPAQPASLSSR*TGVGTGLVLLPSSQ
Trigger: TTGGCTGGAAGGCAGTAGAACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAACTTGCAGGCTGTGCTGGATGATTATTCAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 90 bp TACAGATTTCACCCCACTGACCACATAAACAAAGTAAGGCAGGAGTaGCCCAATCTTGGAGTTCGTCTGCAAGTCCTGGAGTGCAACCTT +
Preference number: 5 (lower is better)
Translates to: YRFHPTDHINKVRQE*PNLGVRLQVLECNL
Trigger: AAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCTTACTTTGTTTATGTGGTCAGTGGGGTGAAATCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294168.8
ENST00000524976.5
CDS GCA 90 bp TACAGATTTCACCCCACTGACCACATAAACAAAGTAAGGCAGGAGTaGCCCAATCTTGGAGTTCGTCTGCAAGTCCTGGAGTGCAACCTA +
Preference number: 5 (lower is better)
Translates to: YRFHPTDHINKVRQE*PNLGVRLQVLECNL
Trigger: TAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCTTACTTTGTTTATGTGGTCAGTGGGGTGAAATCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533823.1
CDS TCA 90 bp TCCATAGACTTTGTGTCCATCTGCTTTGACCTGGGCATTAGATACTaGATAATCATCCAGCACAGCCTGCAAGTTTGTCCAGTAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SIDFVSICFDLGIRY*IIIQHSLQVCPVGG
Trigger: TCCACCTACTGGACAAACTTGCAGGCTGTGCTGGATGATTATTCAGTATCTAATGCCCAGGTCAAAGCAGATGGACACAAAGTCTATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 90 bp GGAAGGGCCCAGACTGCATTGGATCCACCAGAAAATTGTAAAACATaGATGCGGTATTCTTCTGGAAGACAGTGTATCACCTTATTCATG +
Preference number: 5 (lower is better)
Translates to: GRAQTALDPPENCKT*MRYSSGRQCITLFM
Trigger: CATGAATAAGGTGATACACTGTCTTCCAGAAGAATACCGCATTCATGTTTTACAATTTTCTGGTGGATCCAATGCAGTCTGGGCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533823.1
CDS CAA 90 bp TGCGGCATCTTCCGCACCGAGTCCGGGGCTGCCGCCGGCTCCTTCTaGTCCCCGGGCGGCCGCGGAGCCGTGGGTGCAGGCTGGCCGGTG +
Preference number: 6 (lower is better)
Translates to: CGIFRTESGAAAGSF*SPGGRGAVGAGWPV
Trigger: CACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCCGGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp CGTCAGCTGCGGCATCTTCCGCACCGAGTCCGGGGCTaGCGCCGGCTCCTTCTTGTCCCCGGGCGGCCGCGG +
Preference number: 6 (lower is better)
Translates to: RQLRHLPHRVRG*RRLLLVPGRPR
Trigger: CCGCGGCCGCCCGGGGACAAGAAGGAGCCGGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp GCCGGGCTAGGCCCGTACGGCGCGGGGAAGGCAGTCTaGAAAAGGCGCCCGCGGCAGCGCCTCCCAGCCTGC +
Preference number: 6 (lower is better)
Translates to: AGLGPYGAGKAV*KRRPRQRLPAC
Trigger: GCAGGCTGGGAGGCGCTGCCGCGGGCGCCTTTTCCAGACTGCCTTCCCCGCGCCGTACGGGCCTAGCCCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp CCGGCTCCTTCTTGTCCCCGGGCGGCCGCGGAGCCGTaGGTGCAGGCTGGCCGGTGCCAAAGCGTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: PAPSCPRAAAEP*VQAGRCQSVWP
Trigger: TGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTCCGCGGCCGCCCGGGGACAAGAAGGAGCCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp CGCCGCTGCCCCGGGGGCTCTCGTCGCCGTGCGGGCTaGCTATGGCGCTTGCCGTCAGCTGCGGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: RRCPGGSRRRAG*LWRLPSAAASS
Trigger: GGAAGATGCCGCAGCTGACGGCAAGCGCCATAGTCAGCCCGCACGGCGACGAGAGCCCCCGGGGCAGCGGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp TGTCCCATGGCAGGTCGTCCAGGCGCCGGCACCCCCTaGCACCTGGGCCACCCCTGTTGGGCTCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: CPMAGRPGAGTP*HLGHPCWALLP
Trigger: AGGCAGCAGAGCCCAACAGGGGTGGCCCAGGTGGCAGGGGGTGCCGGCGCCTGGACGACCTGCCATGGGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp TCGCCGTGCGGGCTGACTATGGCGCTTGCCGTCAGCTaGGGCATCTTCCGCACCGAGTCCGGGGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: SPCGLTMALAVS*GIFRTESGAAA
Trigger: GGCGGCAGCCCCGGACTCGGTGCGGAAGATGCCGCAGCTGACGGCAAGCGCCATAGTCAGCCCGCACGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp CGCCCCCTGGCGGCAGCGGGAGGCCGGACCCAAAGCTaGGTTCTGCACCGCCCCCGGAGGACGACTCTTGAA +
Preference number: 6 (lower is better)
Translates to: RPLAAAGGRTQS*VLHRPRRTTLE
Trigger: TTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGGCCTCCCGCTGCCGCCAGGGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp GGGGCTCTCGTCGCCGTGCGGGCTGACTATGGCGCTTaGCGTCAGCTGCGGCATCTTCCGCACCGAGTCCGG +
Preference number: 6 (lower is better)
Translates to: GALVAVRADYGA*RQLRHLPHRVR
Trigger: CCGGACTCGGTGCGGAAGATGCCGCAGCTGACGGCAAGCGCCATAGTCAGCCCGCACGGCGACGAGAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp TCTGACATGGCCCCAGTGGAGCTGAAGACCCCGGCGTaGCGAAGGCTGCTACCGAGACGACGGCGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: SDMAPVELKTPA*RRLLPRRRRRG
Trigger: CCCCCGCCGCCGTCGTCTCGGTAGCAGCCTTCGCCACGCCGGGGTCTTCAGCTCCACTGGGGCCATGTCAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000525405.5
ENST00000532915.1
CDS GCA 72 bp CTCCCAGCCTGCCGCCCGGCTATGATGAAACGAAAGTaGGGGGCGCCGCGCGGGGCGAAACGGCTCTTCTGG +
Preference number: 6 (lower is better)
Translates to: LPACRPAMMKRK*GAPRGAKRLFW
Trigger: CCAGAAGAGCCGTTTCGCCCCGCGCGGCGCCCCGCACTTTCGTTTCATCATAGCCGGGCGGCAGGCTGGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp AGTAGTCCGAGAGCGCCCACCGGCGGGCGGGGCGGCTaGTACGGCCGATCATGGGCAGTTTCTGCACGTAGC +
Preference number: 6 (lower is better)
Translates to: SSPRAPTGGRGG*YGRSWAVSARS
Trigger: GCTACGTGCAGAAACTGCCCATGATCGGCCGTACCAGCCGCCCCGCCCGCCGGTGGGCGCTCTCGGACTACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp CCCGGAGGACGACTCTTGAAAGAGAAGGCTGTCCCATaGCAGGTCGTCCAGGCGCCGGCACCCCCTGCCACC +
Preference number: 6 (lower is better)
Translates to: PGGRLLKEKAVP*QVVQAPAPPAT
Trigger: GGTGGCAGGGGGTGCCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CAA 90 bp GCCGGACCCAAAGCTGGGTTCTGCACCGCCCCCGGAGGACGACTCTaGAAAGAGAAGGCTGTCCCATGGCAGGTCGTCCAGGCGCCGGCA +
Preference number: 6 (lower is better)
Translates to: AGPKAGFCTAPGGRL*KEKAVPWQVVQAPA
Trigger: TGCCGGCGCCTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp TGGCGGCAGCGGGAGGCCGGACCCAAAGCTGGGTTCTaGACCGCCCCCGGAGGACGACTCTTGAAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: WRQREAGPKAGF*TAPGGRLLKEK
Trigger: CTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTTGGGTCCGGCCTCCCGCTGCCGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CCA 72 bp GAGCCGTGGGTGCAGGCTGGCCGGTGCCAAAGCGTGTaGCCAAGCTGTCACCGAAGAAGGCGTAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: EPWVQAGRCQSV*PSCHRRRRRAP
Trigger: GGGAGCTCTACGCCTTCTTCGGTGACAGCTTGGCCACACGCTTTGGCACCGGCCAGCCTGCACCCACGGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp CCGAGGGATCTCCACAAACCGCCGCTCTTCTCGCTCTaGCATGGCCCCAGTGGAGCTGAAGACCCCGGCGTG +
Preference number: 6 (lower is better)
Translates to: PRDLHKPPLFSL*HGPSGAEDPGV
Trigger: CACGCCGGGGTCTTCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGGAGATCCCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000525405.5
ENST00000532915.1
CDS CCA 72 bp CTGAGCAGGAGGGCAGCCCCATCCCGCAGAGTCCAGTaGTCATTCAGGGGGTTGATGGAGGCAGCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LSRRAAPSRRVQ*SFRGLMEAASG
Trigger: GCCACTGGCTGCCTCCATCAACCCCCTGAATGACCACTGGACTCTGCGGGATGGGGCTGCCCTCCTGCTCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS CCA 72 bp ACCCGCAGGTTTAGGCCCAGTGGCTACCAGAAGATGTaGCTGAGCAGGAGGGCAGCCCCATCCCGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: TRRFRPSGYQKM*LSRRAAPSRRV
Trigger: GACTCTGCGGGATGGGGCTGCCCTCCTGCTCAGCCACATCTTCTGGTAGCCACTGGGCCTAAACCTGCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524976.5
CDS TCA 72 bp AAGCTGGGTTCTGCACCGCCCCCGGAGGACGACTCTTaGAAGAGAAGGCTGTCCCATGGCAGGTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: KLGSAPPPEDDS*KRRLSHGRSSR
Trigger: CCTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp GAAAAGCTGCCCAGCCTCCCGGAGAGCCCAGGAGTGTaGTCCAACACCCTCCACACCAGCCTTGCTGCTCGT +
Preference number: 6 (lower is better)
Translates to: EKLPSLPESPGV*SNTLHTSLAAR
Trigger: ACGAGCAGCAAGGCTGGTGTGGAGGGTGTTGGATCACACTCCTGGGCTCTCCGGGAGGCTGGGCAGCTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS TCA 72 bp CCCCATCCCGCAGAGTCCAGTGGTCATTCAGGGGGTTaGTGGAGGCAGCCAGTGGCTCCAGGACACAGTAGA +
Preference number: 6 (lower is better)
Translates to: PHPAESSGHSGG*WRQPVAPGHSR
Trigger: TCTACTGTGTCCTGGAGCCACTGGCTGCCTCCATCAACCCCCTGAATGACCACTGGACTCTGCGGGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS GCA 72 bp CTTCGCCCCATTTCCTTACCCCAACCCACTTGGCTCTaGAGCAATCCCACCCGCAGGTTTAGGCCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: LRPISLPQPTWL*SNPTRRFRPSG
Trigger: GCCACTGGGCCTAAACCTGCGGGTGGGATTGCTGCAGAGCCAAGTGGGTTGGGGTAAGGAAATGGGGCGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524976.5
CDS GCA 72 bp GACGGACTCCTGAGAGCTTCAGGCTCTGTGAAGCTCTaGTCAGCATACCCTGGGGGTGAAACACCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: DGLLRASGSVKL*SAYPGGETPPQ
Trigger: CTGGGGCGGTGTTTCACCCCCAGGGTATGCTGAGCAGAGCTTCACAGAGCCTGAAGCTCTCAGGAGTCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS CAA 72 bp AAAGCTGGGTTCTGCACCGCCCCCGGAGGACGACTCTaGAAAGAGAAGGCTGTCCCATGGCAGGTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: KAGFCTAPGGRL*KEKAVPWQVVQ
Trigger: CTGGACGACCTGCCATGGGACAGCCTTCTCTTTCAAGAGTCGTCCTCCGGGGGCGGTGCAGAACCCAGCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp GCTGCTCGTGCTCTGGAGTTTCTAAACAAGGAGCTCTaGAGACCCCGGCGTGGCGAAGGCTGCTACCGAGAC +
Preference number: 6 (lower is better)
Translates to: AARALEFLNKEL*RPRRGEGCYRD
Trigger: GTCTCGGTAGCAGCCTTCGCCACGCCGGGGTCTTCAGAGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS GCA 72 bp CACAGGTGCGGATTACGAAATAGGCTCCGTGCCACCTaGAGCAGCCGGTGCAGTTGCTCCAGGTCATGGCTT +
Preference number: 6 (lower is better)
Translates to: HRCGLRNRLRAT*SSRCSCSRSWL
Trigger: AAGCCATGACCTGGAGCAACTGCACCGGCTGCTGCAGGTGGCACGGAGCCTATTTCGTAATCCGCACCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000533823.1
CDS CCA 72 bp CTTCTCGCTCTGACATGGCCCCAGTGGAGCTGGGAGTaGAGAATGAAGACTGGAAAAGCTGCCCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: LLALTWPQWSWE*RMKTGKAAQPP
Trigger: GGGAGGCTGGGCAGCTTTTCCAGTCTTCATTCTCCACTCCCAGCTCCACTGGGGCCATGTCAGAGCGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS CCA 72 bp GCCGCTCTTCTCGCTCTGACATGGCCCCAGTGGAGCTaGGAGTGGAGAATGAAGACTGGAAAAGCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: AALLALTWPQWS*EWRMKTGKAAQ
Trigger: CTGGGCAGCTTTTCCAGTCTTCATTCTCCACTCCCAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS TCA 72 bp CCGAGGGATCTCCACAAACCGCCGCTCTTCTCGCTCTaGCATGGCCCCAGTGGAGCTCAGAGGCTAAATGTT +
Preference number: 6 (lower is better)
Translates to: PRDLHKPPLFSL*HGPSGAQRLNV
Trigger: AACATTTAGCCTCTGAGCTCCACTGGGGCCATGTCAGAGCGAGAAGAGCGGCGGTTTGTGGAGATCCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529509.1
CDS TCA 72 bp CAGGGCAAGAGACTGCTCTTAGAGCCTGCTCAGCCCTaGCCATCTAGGCTCTGCACACCTCTGTGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: QGKRLLLEPAQP*PSRLCTPLCSV
Trigger: GACAGAGCACAGAGGTGTGCAGAGCCTAGATGGTCAGGGCTGAGCAGGCTCTAAGAGCAGTCTCTTGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS TCA 72 bp CCTCAACCGTCAGCTTCCGGCGTTTGGTGTGCTTCATaGACTGAGAGCTATTCTGCGTGGCCTCTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: PQPSASGVWCAS*TESYSAWPLSD
Trigger: GTCTGAGAGAGGCCACGCAGAATAGCTCTCAGTTCATGAAGCACACCAAACGCCGGAAGCTGACGGTTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000294168.8
ENST00000524976.5
ENST00000529509.1
ENST00000532915.1
CDS TCA 72 bp GGGGCGGGATTTATTTACAAGGAACGAAGGGGCCACTaGCTCAGAGCGGCAAGTACAGCGAGTAGTCCGAGA +
Preference number: 6 (lower is better)
Translates to: GAGFIYKERRGH*LRAASTASSPR
Trigger: TCTCGGACTACTCGCTGTACTTGCCGCTCTGAGTCAGTGGCCCCTTCGTTCCTTGTAAATAAATCCCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS GCA 72 bp CCCAGGAGTGTGATCCAACACCCTCCACACCAGCCTTaGTGCTCGTGCTCTGGAGTTTCTAAACAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: PRSVIQHPPHQP*CSCSGVSKQGA
Trigger: AGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGCAAGGCTGGTGTGGAGGGTGTTGGATCACACTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS CCA 72 bp CACAGCCTGCAAGTTTGTCCAGTAGGTGGACAGGTGTaGGTACAGGACTCGTTCTACTGCCTTCCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: HSLQVCPVGGQV*VQDSFYCLPAK
Trigger: CTTGGCTGGAAGGCAGTAGAACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAACTTGCAGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp CACCTGGTGATAGTACTTGAGAAGGTCATCTGTCAGTaGAGACACAGCACTGGGCACTGCCAGAGGACAGGC +
Preference number: 6 (lower is better)
Translates to: HLVIVLEKVICQ*RHSTGHCQRTG
Trigger: GCCTGTCCTCTGGCAGTGCCCAGTGCTGTGTCTTCACTGACAGATGACCTTCTCAAGTACTATCACCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531265.1
CDS GCA 72 bp AGGAGTGTGATCCAACACCCTCCACACCAGCCTTGCTaGTCGTGCTCTGGAGTTTCTAAACAAGGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: RSVIQHPPHQPC*SCSGVSKQGAL
Trigger: CAGAGCTCCTTGTTTAGAAACTCCAGAGCACGAGCAGCAAGGCTGGTGTGGAGGGTGTTGGATCACACTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526261.1
CDS GCA 72 bp CTGTTTCCTACATCACCCCTTACCCGATCCTTGAGGTaGCAGGTTCCCTTTGCCATCCAGGTAGGAGACATG +
Preference number: 6 (lower is better)
Translates to: LFPTSPLTRSLR*QVPFAIQVGDM
Trigger: CATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGGTAAGGGGTGATGTAGGAAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS CAA 72 bp AAGAGCCTGTTTCCTACATCACCCCTTACCCGATCCTaGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGA +
Preference number: 6 (lower is better)
Translates to: KSLFPTSPLTRS*RCQVPFAIQVG
Trigger: TCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGGTAAGGGGTGATGTAGGAAACAGGCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS GCA 72 bp TGCCCCAATCTTGGAGTTCGTCTGCAAGTCCTGGAGTaGAACCTAAAAGGAAGGGCCCAGACTGCATTGGAT +
Preference number: 6 (lower is better)
Translates to: CPNLGVRLQVLE*NLKGRAQTALD
Trigger: ATCCAATGCAGTCTGGGCCCTTCCTTTTAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533823.1
CDS CCA 72 bp AATCATCCAGCACAGCCTGCAAGTTTGTCCAGTAGGTaGACAGGTGTGGGTACAGGACTCGTTCTACTGCCT +
Preference number: 6 (lower is better)
Translates to: NHPAQPASLSSR*TGVGTGLVLLP
Trigger: AGGCAGTAGAACGAGTCCTGTACCCACACCTGTCCACCTACTGGACAAACTTGCAGGCTGTGCTGGATGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS CAA 90 bp ATTCATCCAAAGAGCCTGTTTCCTACATCACCCCTTACCCGATCCTaGAGGTGCCAGGTTCCCTTTGCCATCCAGGTAGGAGACATGAAC +
Preference number: 6 (lower is better)
Translates to: IHPKSLFPTSPLTRS*RCQVPFAIQVGDMN
Trigger: GTTCATGTCTCCTACCTGGATGGCAAAGGGAACCTGGCACCTCAAGGATCGGGTAAGGGGTGATGTAGGAAACAGGCTCTTTGGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532915.1
CDS CCA 72 bp CCACATAAACAAAGTAAGGCAGGAGTGCCCCAATCTTaGAGTTCGTCTGCAAGTCCTGGAGTGCAACCTTCA +
Preference number: 6 (lower is better)
Translates to: PHKQSKAGVPQS*SSSASPGVQPS
Trigger: TGAAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCTTACTTTGTTTATGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000294168.8
ENST00000524976.5
CDS CCA 72 bp CCACATAAACAAAGTAAGGCAGGAGTGCCCCAATCTTaGAGTTCGTCTGCAAGTCCTGGAGTGCAACCTAAA +
Preference number: 6 (lower is better)
Translates to: PHKQSKAGVPQS*SSSASPGVQPK
Trigger: TTTAGGTTGCACTCCAGGACTTGCAGACGAACTCCAAGATTGGGGCACTCCTGCCTTACTTTGTTTATGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533823.1
CDS TCA 72 bp TTTGTGTCCATCTGCTTTGACCTGGGCATTAGATACTaGATAATCATCCAGCACAGCCTGCAAGTTTGTCCA +
Preference number: 6 (lower is better)
Translates to: FVSICFDLGIRY*IIIQHSLQVCP
Trigger: TGGACAAACTTGCAGGCTGTGCTGGATGATTATTCAGTATCTAATGCCCAGGTCAAAGCAGATGGACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000294168.8
CDS TCA 72 bp CAGACTGCATTGGATCCACCAGAAAATTGTAAAACATaGATGCGGTATTCTTCTGGAAGACAGTGTATCACC +
Preference number: 6 (lower is better)
Translates to: QTALDPPENCKT*MRYSSGRQCIT
Trigger: GGTGATACACTGTCTTCCAGAAGAATACCGCATTCATGTTTTACAATTTTCTGGTGGATCCAATGCAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533823.1