RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000130699

Ensembl transcript IDs: ENST00000252996.8, ENST00000252996.9, ENST00000436129.2, ENST00000474089.5, ENST00000486599.1, ENST00000488539.1, ENST00000608458.1, ENST00000608887.1, ENST00000609041.1, ENST00000609045.1, ENST00000625376.1, ENST00000626682.1, ENST00000626855.1, ENST00000627770.2, ENST00000628040.1, ENST00000628525.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACCCCGTCCCCCTCCCATaGGGTGGGGCTCGCATCCAA +
Preference number: 2 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHPVPLP*GGARIQ
Trigger: TTGGATGCGAGCCCCACCCCATGGGAGGGGGACGGG...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR TCA 90 bp TGGCTGAACCCACAGTCAAGGGGCAGGGAATTAGACTCCACCCCCTTAGTGGGGGAAGGATGGGGCCAGTaGTGCCAGGGGCCCACAGGG +
Preference number: 2 (lower is better)
Translates to: WLNPQSRGRELDSTPLVGEGWGQ*CQGPTG
Trigger: CCCTGTGGGCCCCTGGCATCACTGGCCCCATCCTTC...CCCCACTAAGGGGGTGGAGTCTAATTCCCTGCCCCTTGACTGTGGGTTCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR GCA 90 bp GGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCAGTGATGCCAGGGGGGCTCGCATCCAATaGCTGGTTCCAAGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GTGQAWLAGVKDGASDARGARIQ*LVPSVL
Trigger: GAGGACACTTGGAACCAGGCATTGGATGCGAGCCCC...CCTGGCATCACTGGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR CCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCGCCCACAGGGGTGCATaGGGGTCAGAACCCATCATT +
Preference number: 2 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGAAHRGA*GSEPII
Trigger: AATGATGGGTTCTGACCCCCATGCACCCCTGTGGGC...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR GCA 90 bp GGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCGGGGCTCGCATCCAATaGCTGGTTCCAAGTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GGQNPSFTPQAQAQGQLAGARIQ*LVPSVL
Trigger: GAGGACACTTGGAACCAGGCATTGGATGCGAGCCCC...GGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR CCA 90 bp GGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCTCGCATCCAATGCCTaGTTCCAAGTGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GGQNPSFTPQAQAQGQLALASNA*FQVSSS
Trigger: TGAGGAGGACACTTGGAACCAGGCATTGGATGCGAG...GGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR CCA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACCTCGCATCCAATGCCTaGTTCCAAGTGTCCTCCTCA +
Preference number: 2 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHLASNA*FQVSSS
Trigger: TGAGGAGGACACTTGGAACCAGGCATTGGATGCGAG...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
3UTR-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGATTACACTCTGAGGTaGGGGTGCAACGATGAATTG +
Preference number: 2 (lower is better)
Translates to: LTTHSEGATFAGLGLYQADYTLR*GCNDEL
Trigger: CAATTCATCGTTGCACCCCCACCTCAGAGTGTAATC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAATGCAGAAACTGCTATaGGTTGACAGAGGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRMQKLL*VDRGQL
Trigger: TAGCTGCCCTCTGTCAACTCATAGCAGTTTCTGCAT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGAAACTGCTATGAGTTaGCAGAGGGCAGCTAATTAT +
Preference number: 2 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRETAMS*QRAANY
Trigger: ATAATTAGCTGCCCTCTGTCAACTCATAGCAGTTTC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAATCAGTCTTTATATATaGCTTGTTTGGCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRISLYI*LVWQEG
Trigger: GCCTTCCTGCCAAACAAGCCATATATAAAGACTGAT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR GCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAAAACAATATCCCATTTaGTCGTTACAAAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRKQYPI*SLQKGV
Trigger: TACGCCTTTTTGTAACGAGCAAATGGGATATTGTTT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATAGGAGCCACCTTTGCTaGGCTCGGCCTCTACCAAGC +
Preference number: 2 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDRSHLC*ARPLPS
Trigger: GCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCT...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAAGAAGGAGCCACCTTTaGTGGGCTCGGCCTCTACCA +
Preference number: 2 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKRRSHL*WARPLP
Trigger: TGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCGAAGGGGCTTTGCTCTaGACGTCTGTAAAGTCGGCC +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVEGALL*TSVKSA
Trigger: GGCCGACTTTACAGACGTCCAGAGCAAAGCCCCTTC...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCGTGGGGGTGCAACGATaGATTGTGTATTCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVVGVQR*IVYSSR
Trigger: CCTGGAGGAATACACAATTCATCGTTGCACCCCCAC...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCAATGCGATTACACTCTaGGGTGGGGGTGCAACGATG +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVNAITL*GGGATM
Trigger: CATCGTTGCACCCCCACCTCAGAGTGTAATCGCATT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR GCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCAGTCGGCCCAAGGCTTaGATACAGTCTCTTAGCAAA +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVSRPKA*IQSLSK
Trigger: TTTGCTAAGAGACTGTATGCAAGCCTTGGGCCGACT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCGATTACACTCTGAGGTaGGGGTGCAACGATGAATTG +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVDYTLR*GCNDEL
Trigger: CAATTCATCGTTGCACCCCCACCTCAGAGTGTAATC...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAATGCAGAAACTGCTATaGGTTGACAGAGGGCAGCTA +
Preference number: 2 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKMQKLL*VDRGQL
Trigger: TAGCTGCCCTCTGTCAACTCATAGCAGTTTCTGCAT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCGAAACTGCTATGAGTTaGCAGAGGGCAGCTAATTAT +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVETAMS*QRAANY
Trigger: ATAATTAGCTGCCCTCTGTCAACTCATAGCAGTTTC...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR TCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACATTTGTACAGATGCTaGCCACACATTCAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKHLYRC*PHIQKE
Trigger: CTCCTTCTGAATGTGTGGTCAGCATCTGTACAAATG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAATCTACCAAGCAGAAATaGGATTACACTCTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKSTKQK*DYTLRW
Trigger: CCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGA...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATCAGTCTTTATATATaGCTTGTTTGGCAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVISLYI*LVWQEG
Trigger: GCCTTCCTGCCAAACAAGCCATATATAAAGACTGAT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR GCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATAAACAATATCCCATTTaGTCGTTACAAAAAGGCGTA +
Preference number: 2 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDKQYPI*SLQKGV
Trigger: TACGCCTTTTTGTAACGAGCAAATGGGATATTGTTT...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGTCTTTATATATGGCTaGTTTGGCAGGAAGGCCACT +
Preference number: 3 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAVFIYG*FGRKAT
Trigger: AGTGGCCTTCCTGCCAAACAAGCCATATATAAAGAC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAAGTATCCACAGGCCTTaGTGTTCTCTCTGTTACAGA +
Preference number: 3 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRSIHRP*CSLCYR
Trigger: TCTGTAACAGAGAGAACACAAAGGCCTGTGGATACT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGTCTTTATATATGGCTaGTTTGGCAGGAAGGCCACT +
Preference number: 3 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRVFIYG*FGRKAT
Trigger: AGTGGCCTTCCTGCCAAACAAGCCATATATAAAGAC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAAGGGCAGCTAATTATTaGCTAACGATTCCATCAGTC +
Preference number: 3 (lower is better)
Translates to: LTTHSEGATFAGLGLYQARAANY*LTIPSV
Trigger: GACTGATGGAATCGTTAGCAAATAATTAGCTGCCCT...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATCAGAAGGAGCCACCTTaGCTGGGCTCGGCCTCTACC +
Preference number: 3 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDQKEPP*LGSAST
Trigger: GGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTG...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGGGTGCAACGATGAATaGTGTATTCCTCCAGGATTC +
Preference number: 3 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDGCNDE*CIPPGF
Trigger: GAATCCTGGAGGAATACACAATTCATCGTTGCACCC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAATACAAAGAAGGGGCTTaGCTCTGGACGTCTGTAAAG +
Preference number: 3 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKYKEGA*LWTSVK
Trigger: CTTTACAGACGTCCAGAGCAAAGCCCCTTCTTTGTA...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCAGGGCAGCTAATTATTaGCTAACGATTCCATCAGTC +
Preference number: 3 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVRAANY*LTIPSV
Trigger: GACTGATGGAATCGTTAGCAAATAATTAGCTGCCCT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
3UTR-3UTR CAA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACCGAGAAACAGTCTTTaGATGATTCTTCTCAACTTT +
Preference number: 3 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKPRNSL*MILLNF
Trigger: AAAGTTGAGAAGAATCATCAAAAGACTGTTTCTCGG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.8
ENST00000627770.2
CDS-3UTR TCA 90 bp GGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCGGAGGCCTCTGCTCCTaGGCCCGGCCCCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: GGQNPSFTPQAQAQGQLAGGLCS*ARPRTV
Trigger: GACTGTCCGGGGCCGGGCTCAGGAGCAGAGGCCTCC...GGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCGAAGGATGGGGCCAGTaGTGCCAGGGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGAEGWGQ*CQGPTG
Trigger: CCCTGTGGGCCCCTGGCATCACTGGCCCCATCCTTC...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCTCGCTGCTAGTGCTGTaGGGTTGGCGTCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGASLLVL*GWRPAV
Trigger: GACAGCGGGACGCCAACCTCACAGCACTAGCAGCGA...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp TGGCTGAACCCACAGTCAAGGGGCAGGGAATTAGACTCCACCCCCTTAGTGGGGGGAGGCCTCTGCTCCTaGGCCCGGCCCCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: WLNPQSRGRELDSTPLVGGGLCS*ARPRTV
Trigger: GACTGTCCGGGGCCGGGCTCAGGAGCAGAGGCCTCC...CCCCACTAAGGGGGTGGAGTCTAATTCCCTGCCCCTTGACTGTGGGTTCAGCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp GGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCAGTGATGCCAGGCCGCTGCTTACTGAGTaGCACGGAGGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GTGQAWLAGVKDGASDARPLLTE*HGGLCS
Trigger: GGAGCAGAGGCCTCCGTGGCACTCAGTAAGCAGCGG...CCTGGCATCACTGGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACGAGCCCGCTGCTTACTaGGTGCCACGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHEPAAY*VPRRPL
Trigger: CAGAGGCCTCCGTGGCACTCAGTAAGCAGCGGGCTC...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGAAGGATGGGGCCAGTaGTGCCAGGGGCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GAWGSEPIIHSPSTSPGPEGWGQ*CQGPTG
Trigger: CCCTGTGGGCCCCTGGCATCACTGGCCCCATCCTTC...TGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAAGCGCAGTGGTGGCCTaGGAGGTGGGCGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQASAVVA*EVGGGG
Trigger: GCCGCCACCGCCCACCTCGCAGGCCACCACTGCGCT...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCCCGTCCCCCTCCCATaGGGTGGGGCTCGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHPVPLP*GGARIQ
Trigger: TTGGATGCGAGCCCCACCCCATGGGAGGGGGACGGG...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACAGAGCCCGCTGCTTACTaGGTGCCACGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VRTHHSLPKHKPRASWPTEPAAY*VPRRPL
Trigger: CAGAGGCCTCCGTGGCACTCAGTAAGCAGCGGGCTC...TGTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCCCAGGACGCTCTCCCTaGGCCCGCTGCTTACTGAGT +
Preference number: 4 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRAPGRSP*ARCLLS
Trigger: ACTCAGTAAGCAGCGGGCTCAGGGAGAGCGTCCTGG...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCCGTGGTTGGCAGGGGTaGAGGATGGGGCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRARGWQG*RMGPVM
Trigger: CATCACTGGCCCCATCCTTCACCCCTGCCAACCACG...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCGGGGCTCGCATCCAATaGCTGGTTCCAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGAGARIQ*LVPSVL
Trigger: GAGGACACTTGGAACCAGGCATTGGATGCGAGCCCC...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACTGCGAGGTGGGCGGTaGCGGCTGCTGCTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQALRGGR*RLLLAL
Trigger: CAGAGCCAGCAGCAGCCGCCACCGCCCACCTCGCAG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGGGCACTGGTCACGGTaGCCGCCGTCTTCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRGHWSR*PPSSRP
Trigger: CGGCCGGGAAGACGGCGGCCACCGTGACCAGTGCCC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGGGGCTGGAGGGCACTaGTCACGGTGGCCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAGAGGH*SRWPPS
Trigger: AGACGGCGGCCACCGTGACCAGTGCCCTCCAGCCCC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp TGGCTGAACCCACAGTCAAGGGGCAGGGAATTAGACTCCACCCCCTTAGTGGGGCCCGTCCCCCTCCCATaGGGTGGGGCTCGCATCCAA +
Preference number: 4 (lower is better)
Translates to: WLNPQSRGRELDSTPLVGPVPLP*GGARIQ
Trigger: TTGGATGCGAGCCCCACCCCATGGGAGGGGGACGGG...CCCCACTAAGGGGGTGGAGTCTAATTCCCTGCCCCTTGACTGTGGGTTCAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCCAGGACGCTCTCCCTaGGCCCGCTGCTTACTGAGT +
Preference number: 4 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHPGRSP*ARCLLS
Trigger: ACTCAGTAAGCAGCGGGCTCAGGGAGAGCGTCCTGG...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCGTGGTTGGCAGGGGTaGAGGATGGGGCCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHRGWQG*RMGPVM
Trigger: CATCACTGGCCCCATCCTTCACCCCTGCCAACCACG...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACCGACCTGCGTGGGCTaGGTGAGGCTGAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAPTCVG*VRLSTG
Trigger: CCCTGTGCTCAGCCTCACGCAGCCCACGCAGGTCGG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp GTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACACCGCTGCTTACTGAGTaGCACGGAGGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VRTHHSLPKHKPRASWPTPLLTE*HGGLCS
Trigger: GGAGCAGAGGCCTCCGTGGCACTCAGTAAGCAGCGG...TGTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp GGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCGCCCACAGGGGTGCATaGGGGTCAGAACCCATCATT +
Preference number: 4 (lower is better)
Translates to: GGQNPSFTPQAQAQGQLAAHRGA*GSEPII
Trigger: AATGATGGGTTCTGACCCCCATGCACCCCTGTGGGC...GGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCCCTCCTCATCTTACCTaGATGGTGACCATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGAPPHLT*MVTIQD
Trigger: GTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGG...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCCTCGCATCCAATGCCTaGTTCCAAGTGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGALASNA*FQVSSS
Trigger: TGAGGAGGACACTTGGAACCAGGCATTGGATGCGAG...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCGCCCACAGGGGTGCATaGGGGTCAGAACCCATCATT +
Preference number: 4 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRAAHRGA*GSEPII
Trigger: AATGATGGGTTCTGACCCCCATGCACCCCTGTGGGC...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR TCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCATCGCTGCTAGTGCTGTaGGGTTGGCGTCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQASLLVL*GWRPAV
Trigger: GACAGCGGGACGCCAACCTCACAGCACTAGCAGCGA...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCATCTTACCTGCATGGTaGCCATCCAGGACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRAILPAW*PSRTLS
Trigger: GGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGAT...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGGCTGCTGCTGGCTCTaGTGGATGAAGGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRGCCWL*WMKAAE
Trigger: CTCCGCGGCCTTCATCCAGCAGAGCCAGCAGCAGCC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACCTGGCTTCGGAGGCTaGTGGATGACCAGCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAPGFGG*WMTSGV
Trigger: CACACCGCTGGTCATCCAGCAGCCTCCGAAGCCAGG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp GGGAGCTTCAGAGGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCCCGCTGTCTCATTTGTaGCAGTTCCTGTTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GSFRGTGQAWLAGVKDGAPLSHL*QFLLLH
Trigger: ATGCAGCAACAGGAACTGGCACAAATGAGACAGCGG...GGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCCTCTGAAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGGTGGCGGCTGCTGCTaGCTCTGCTGGATGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRGGGCC*LCWMKA
Trigger: GGCCTTCATCCAGCAGAGCCAGCAGCAGCCGCCACC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp GGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAATCTTACCTGCATGGTaGCCATCCAGGACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GAWGSEPIIHSPSTSPGPILPAW*PSRTLS
Trigger: GGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGAT...TGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACCCTCCTCATCTTACCTaGATGGTGACCATCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHPPHLT*MVTIQD
Trigger: GTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGG...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp TGGCTGAACCCACAGTCAAGGGGCAGGGAATTAGACTCCACCCCCTTAGTGGGGGGGGCTCGCATCCAATaGCTGGTTCCAAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: WLNPQSRGRELDSTPLVGGARIQ*LVPSVL
Trigger: GAGGACACTTGGAACCAGGCATTGGATGCGAGCCCC...CCCCACTAAGGGGGTGGAGTCTAATTCCCTGCCCCTTGACTGTGGGTTCAGCCA
59% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCCTCGCATCCAATGCCTaGTTCCAAGTGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRALASNA*FQVSSS
Trigger: TGAGGAGGACACTTGGAACCAGGCATTGGATGCGAG...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACTGTGCCAGTTCCTGTTaGTGCATCTCCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHCASSC*CISFAF
Trigger: GAAGGCAAAGGAGATGCAGCAACAGGAACTGGCACA...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAAGAAGGAGCCACCTTTaGTGGGCTCGGCCTCTACCA +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQARRSHL*WARPLP
Trigger: TGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCT...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCTTTCCTCTTTTTCCTaGGCCCGATCGCTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHLSSFS*ARSLLV
Trigger: CACTAGCAGCGATCGGGCCCAGGAAAAAGAGGAAAG...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR GCA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATTGTGCCAGTTCCTGTTaGTGCATCTCCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHCASSC*CISFAF
Trigger: GAAGGCAAAGGAGATGCAGCAACAGGAACTGGCACA...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCATTTCACCACAGGGACTaGCTGCAGTGGGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAFHHRD*LQWVQL
Trigger: CAGCTGAACCCACTGCAGCCAGTCCCTGTGGTGAAA...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACTTTCCTCTTTTTCCTaGGCCCGATCGCTGCTAGTG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQALSSFS*ARSLLV
Trigger: CACTAGCAGCGATCGGGCCCAGGAAAAAGAGGAAAG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGTGGGGGTGCAACGATaGATTGTGTATTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRVGVQR*IVYSSR
Trigger: CCTGGAGGAATACACAATTCATCGTTGCACCCCCAC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAAATGCGATTACACTCTaGGGTGGGGGTGCAACGATG +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRNAITL*GGGATM
Trigger: CATCGTTGCACCCCCACCTCAGAGTGTAATCGCATT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAAGGATCTCCCGCTCCTaGTCATCCTTCCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRRISRS*SSFLCF
Trigger: AAAGCAGAGGAAGGATGAGCAGGAGCGGGAGATCCT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGATGGATCTTCTTGTCTTaGCCGAGACTTTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRWIFLS*PRLCCP
Trigger: AGGGCAGCAAAGTCTCGGTCAAGACAAGAAGATCCA...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCCGACCCCTCTGCTCCTaGGCCCGGCCCCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVRPLCS*ARPRTV
Trigger: GACTGTCCGGGGCCGGGCTCAGGAGCAGAGGGGTCG...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGATTTGTAGAGCAGCAGTaGATGGCTTGTCTCACGTTC +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRFVEQQ*MACLTF
Trigger: GAACGTGAGACAAGCCATTCACTGCTGCTCTACAAA...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACATTTGTACAGATGCTaGCCACACATTCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAHLYRC*PHIQKE
Trigger: CTCCTTCTGAATGTGTGGTCAGCATCTGTACAAATG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCATCTACCAAGCAGAAATaGGATTACACTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQASTKQK*DYTLRW
Trigger: CCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGA...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGCTGGCTCTGCTGGATaGAGGCCGCGGAGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDAGSAG*RPRSRG
Trigger: CCCCCGACTCCGCGGCCTTCATCCAGCAGAGCCAGC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATTCAGCACCACGGCCGTaGGCGCAGTGGTGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDSAPRP*AQWWPA
Trigger: CGCAGGCCACCACTGCGCTCACGGCCGTGGTGCTGA...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGAAACTGCTATGAGTTaGCAGAGGGCAGCTAATTAT +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAETAMS*QRAANY
Trigger: ATAATTAGCTGCCCTCTGTCAACTCATAGCAGTTTC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCATTGTTGCGTGGCATGTaGTACATAACTTACTACATC +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQALLRGM*YITYYI
Trigger: GATGTAGTAAGTTATGTATCACATGCCACGCAACAA...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGGTGTGGGTTGCCCCTaGTTGCCGACGCCGACCTGC +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDGVGCP*LPTPTC
Trigger: GCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAAAGGTAAGGTTGAGGTaGAGAATTAAGTTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRKVRLR*RIKFSV
Trigger: TACCGAGAACTTAATTCTTCACCTCAACCTTACCTT...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACTGCTGAGCTGTTTCTaGTATTTTCTCTACAAGATT +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQALLSCF*YFLYKI
Trigger: AATCTTGTAGAGAAAATATCAGAAACAGCTCAGCAG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAATGGGTTGCCCCTGCTTaGCGACGCCGACCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKWVAPA*RRRPAW
Trigger: CCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCA...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAACCAGCGGTGTGGGTTaGCCCTGCTTGCCGACGCCG +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKTSGVG*PCLPTP
Trigger: CGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGATACTCCAGCCATCGATaGAACATCATTAATGTCATC +
Preference number: 4 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRYSSHR*NIINVI
Trigger: GATGACATTAATGATGTTGCATCGATGGCTGGAGTA...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATTTCCGACACCCGAGCTaGCTGGGACCACTGAGCCGG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDFRHPS*LGPLSR
Trigger: CCGGCTCAGTGGTCCCAGGCAGCTCGGGTGTCGGAA...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCTTCCCGGCCGTGCGCTaGACCGAGCTACTCAGCACC +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVFPAVR*TELLST
Trigger: GGTGCTGAGTAGCTCGGTCCAGCGCACGGCCGGGAA...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCACCAATTCAGAGTTCGTaGCTAATATTCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAPIQSS*LIFLHF
Trigger: AAAGTGCAAGAATATTAGCCACGAACTCTGAATTGG...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAAGCATGATCCGGTTGTaGGGCTGCCGCAGGGCGACC +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKSMIRL*GCRRAT
Trigger: GGTCGCCCTGCGGCAGCCTCACAACCGGATCATGCT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACCGTCTTCCCGGCCGTaGGCTGGACCGAGCTACTCA +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKPSSRP*AGPSYS
Trigger: TGAGTAGCTCGGTCCAGCGCACGGCCGGGAAGACGG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGCGACCATGGGTGTCTaGGTCAACGTCACCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDATMGV*VNVTCG
Trigger: CCCGCAGGTGACGTTGACGCAGACACCCATGGTCGC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATTGCTGCTGGCTCTGCTaGATGAAGGCCGCGGAGTCG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDCCWLC*MKAAES
Trigger: CGACTCCGCGGCCTTCATCCAGCAGAGCCAGCAGCA...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGGCTTCGGAGGCTGCTaGATGACCAGCGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDGFGGC*MTSGVG
Trigger: ACCCACACCGCTGGTCATCCAGCAGCCTCCGAAGCC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGCCGCAGGGCGACCATaGGTGTCTGCGTCAACGTCA +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDAAGRP*VSASTS
Trigger: TGACGTTGACGCAGACACCCATGGTCGCCCTGCGGC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACCGGATCAGGGCTCCTaGCTTCGGAGGCTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKPDQGS*LRRLLD
Trigger: ATCCAGCAGCCTCCGAAGCCAGGAGCCCTGATCCGG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAAGGAGCCACCTTTGCTaGGCTCGGCCTCTACCAAGC +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKRSHLC*ARPLPS
Trigger: GCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATTTCAGCTGGATCTGCTaGGGCGTGGTGAGCATGATC +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDFSWIC*GVVSMI
Trigger: GATCATGCTCACCACGCCTCAGCAGATCCAGCTGAA...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAACCACAGGGACTGGCTaGAGTGGGTTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKTTGTG*SGFSWI
Trigger: GATCCAGCTGAACCCACTGCAGCCAGTCCCTGTGGT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCAGGACCGCGTTAGCGTaGCCACCAATTCAGAGTTCG +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVRTALA*PPIQSS
Trigger: CGAACTCTGAATTGGTGGGCACGCTAACGCGGTCCT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATCGGACGTCACTCGCCTaGTCATATCTGTCGTCATCC +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDRTSLA*SYLSSS
Trigger: GGATGACGACAGATATGAGCAGGCGAGTGACGTCCG...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCCAGCAGAAAGGGCTTTaGTTCCAGGTAACACGGCGG +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVQQKGL*FQVTRR
Trigger: CCGCCGTGTTACCTGGAACCAAAGCCCTTTCTGCTG...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGAAGGGGCTTTGCTCTaGACGTCTGTAAAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDEGALL*TSVKSA
Trigger: GGCCGACTTTACAGACGTCCAGAGCAAAGCCCCTTC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCTGTGCCAGTTCCTGTTaGTGCATCTCCTTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVCASSC*CISFAF
Trigger: GAAGGCAAAGGAGATGCAGCAACAGGAACTGGCACA...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACCGCTGTCTCATTTGTaGCAGTTCCTGTTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKPLSHL*QFLLLH
Trigger: ATGCAGCAACAGGAACTGGCACAAATGAGACAGCGG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAACTCTGCAAAGGCGCTTaGAGGAGGAAGGTTTCATCT +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKLCKGA*RRKVSS
Trigger: AGATGAAACCTTCCTCCTCCAAGCGCCTTTGCAGAG...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGATTACACTCTGAGGTaGGGGTGCAACGATGAATTG +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDDYTLR*GCNDEL
Trigger: CAATTCATCGTTGCACCCCCACCTCAGAGTGTAATC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR GCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCTCTAATATTCTTCTCTaGAAAGGCGCTTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVSNILL*KGAWRR
Trigger: CCTCCTCCAAGCGCCTTTGCAGAGAAGAATATTAGA...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATTCTTGCACTTTCTTCTaGCAAGTTTACTCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDSCTFF*QVYSSH
Trigger: ATGGCTGGAGTAAACTTGTCAGAAGAAAGTGCAAGA...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCCCATTTTTCAACACTTaGTTCACACCGAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVPFFNT*FTPRNS
Trigger: ACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGG...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAGTAGCCTTTGTTGCGTaGCATGTGATACATAACTTA +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKVAFVA*HVIHNL
Trigger: TAAGTTATGTATCACATGCCACGCAACAAAGGCTAC...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAATCAGTCTTTATATATaGCTTGTTTGGCAGGAAGGC +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKISLYI*LVWQEG
Trigger: GCCTTCCTGCCAAACAAGCCATATATAAAGACTGAT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR TCA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAGAAAAGTTCTTCTGCTaGGCTGTTTCTGATATTTTC +
Preference number: 4 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKEKFFC*AVSDIF
Trigger: GAAAATATCAGAAACAGCTCAGCAGAAGAACTTTTC...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS GCA 90 bp ACCATGCTGGCCGCCGTGCTGGCCGGGCCGCTGGCCGCCAGGGTCTaGGCCGCCGGGGGCGCCGCCTGCACCACCCTCTTGGGCGACTCG +
Preference number: 5 (lower is better)
Translates to: TMLAAVLAGPLAARV*AAGGAACTTLLGDS
Trigger: CGAGTCGCCCAAGAGGGTGGTGCAGGCGGCGCCCCCGGCGGCGCAGACCCTGGCGGCCAGCGGCCCGGCCAGCACGGCGGCCAGCATGGT
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 90 bp CCCGCTGGTGGTGGCCGTGGGCGTCCGGGACAGGCTCTGGGTCACTaGGCCGGCCGCGCCTTTGGGCAGCCCGGTGGGGGTCCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: PAGGGRGRPGQALGH*AGRAFGQPGGGPGG
Trigger: GCCCCCGGGACCCCCACCGGGCTGCCCAAAGGCGCGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GCACCTCGGGCGTGCGCGGCGCGAGGTGGTGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCCAGCGAGCCCACCAGGTCGCTCACCA +
Preference number: 5 (lower is better)
Translates to: APRACAARGGGGGPR*PPAATPASPPGRSP
Trigger: TGGTGAGCGACCTGGTGGGCTCGCTGGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGCCCGAGGTGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GCCCGAATCCCGCTGGTGGTGGCCGTGGGCGTCCGGGACAGGCTCTaGGTCACTGCGCCGGCCGCGCCTTTGGGCAGCCCGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: ARIPLVVAVGVRDRL*VTAPAAPLGSPVGV
Trigger: GACCCCCACCGGGCTGCCCAAAGGCGCGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GGGCCAGCACGGTGGGCGTCAGGGTGGCCCGAATCCCGCTGGTGGTaGCCGTGGGCGTCCGGGACAGGCTCTGGGTCACTGCGCCGGCCG +
Preference number: 5 (lower is better)
Translates to: GPARWASGWPESRWW*PWASGTGSGSLRRP
Trigger: CGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGCCACCCTGACGCCCACCGTGCTGGCCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GCACGGTGGGCGTCAGGGTGGCCCGAATCCCGCTGGTGGTGGCCGTaGGCGTCCGGGACAGGCTCTGGGTCACTGCGCCGGCCGCGCCTT +
Preference number: 5 (lower is better)
Translates to: ARWASGWPESRWWWP*ASGTGSGSLRRPRL
Trigger: AAGGCGCGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGCCACCCTGACGCCCACCGTGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 90 bp TCTTCCCGGCCGTGCGCTGGACCGAGCTACTCAGCACCACGGCCGTaGGCGCAGTGGTGGCCTGCGAGGTGGGCGGTGGCGGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSRPCAGPSYSAPRP*AQWWPARWAVAAAA
Trigger: AGCAGCAGCCGCCACCGCCCACCTCGCAGGCCACCACTGCGCTCACGGCCGTGGTGCTGAGTAGCTCGGTCCAGCGCACGGCCGGGAAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS CCA 90 bp TGGAGGGCACTGGTCACGGTGGCCGCCGTCTTCCCGGCCGTGCGCTaGACCGAGCTACTCAGCACCACGGCCGTGAGCGCAGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: WRALVTVAAVFPAVR*TELLSTTAVSAVVA
Trigger: GGCCACCACTGCGCTCACGGCCGTGGTGCTGAGTAGCTCGGTCCAGCGCACGGCCGGGAAGACGGCGGCCACCGTGACCAGTGCCCTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS GCA 90 bp CGGCAGCAGCGCGGCGGGCCCGTTGTTGACCAGGCTGACAGCAGGTaGGGCGGCGTGGTGCGAGTTCAGCAGCGCGGCGCTCCCATTCAA +
Preference number: 5 (lower is better)
Translates to: RQQRGGPVVDQADSR*GGVVRVQQRGAPIQ
Trigger: TTGAATGGGAGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGCCGCGCTGCTGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 90 bp GCCAAATGCAGAGTCGCCGTCCGCGGAACCGCCCGGTGCAGGGTCTaGGCCACCCAAACGTCAGGCCCCACACGGTCAGCACCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AKCRVAVRGTARCRV*ATQTSGPTRSAPGG
Trigger: GCCCCCAGGTGCTGACCGTGTGGGGCCTGACGTTTGGGTGGCGCAGACCCTGCACCGGGCGGTTCCGCGGACGGCGACTCTGCATTTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp GCGGGCCCGTTGTTGACCAGGCTGACAGCAGGTGCGGCGGCGTGGTaGGAGTTCAGCAGCGCGGCGCTCCCATTCAAAGTTTGCGCGGCG +
Preference number: 5 (lower is better)
Translates to: AGPLLTRLTAGAAAW*EFSSAALPFKVCAA
Trigger: CGCCGCGCAAACTTTGAATGGGAGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 90 bp ATGCTGTGCCCACAGCCGCCCCGGGCGGCGGGTAACAATAGCCTATaGCGCACACACTCCAGCCACCTCCGCCCCGAACGCGTACGTGCC +
Preference number: 5 (lower is better)
Translates to: MLCPQPPRAAGNNSL*RTHSSHLRPERVRA
Trigger: GGCACGTACGCGTTCGGGGCGGAGGTGGCTGGAGTGTGTGCGGCATAGGCTATTGTTACCCGCCGCCCGGGGCGGCTGTGGGCACAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp CTGTGCAGACCAGTCAGGCGCCCCTTCCATACCAGCGGTGTGGGTTaGCCCTGCTTGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LCRPVRRPFHTSGVG*PCLPTPTCVGCVRL
Trigger: CAGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGGTCTGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp GCGGCGGGCCCGTTGTTGACCAGGCTGACAGCAGGTGCGGCGGCGTaGTGCGAGTTCAGCAGCGCGGCGCTCCCATTCAAAGTTTGCGCG +
Preference number: 5 (lower is better)
Translates to: AAGPLLTRLTAGAAA*CEFSSAALPFKVCA
Trigger: CGCGCAAACTTTGAATGGGAGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GTGCCTGTACGGTGGAGATCTGGACGGGAGGGGCACTTGTGGGGGTaGCAGGGCGAGGCGCCATGGTGGTCTGAGGCTGGGCATGGGCCT +
Preference number: 5 (lower is better)
Translates to: VPVRWRSGREGHLWG*QGEAPWWSEAGHGP
Trigger: AGGCCCATGCCCAGCCTCAGACCACCATGGCGCCTCGCCCTGCCACCCCCACAAGTGCCCCTCCCGTCCAGATCTCCACCGTACAGGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS CCA 90 bp GGGTGTCTGCGTCAACGTCACCTGCGGGGGCCGGATCAGGGCTCCTaGCTTCGGAGGCTGCTGGATGACCAGCGGTGTGGGTTGCCCCTG +
Preference number: 5 (lower is better)
Translates to: GCLRQRHLRGPDQGS*LRRLLDDQRCGLPL
Trigger: CAGGGGCAACCCACACCGCTGGTCATCCAGCAGCCTCCGAAGCCAGGAGCCCTGATCCGGCCCCCGCAGGTGACGTTGACGCAGACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS CCA 90 bp GGGTGTCTGCGTCAACGTCACCTGCGGGGGCCGGATCAGGGCTCCTaGCTTCGGAGGCTGCTGGATGACCTGCGTGGGCTGCGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GCLRQRHLRGPDQGS*LRRLLDDLRGLREA
Trigger: AGCCTCACGCAGCCCACGCAGGTCATCCAGCAGCCTCCGAAGCCAGGAGCCCTGATCCGGCCCCCGCAGGTGACGTTGACGCAGACACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000488539.1
ENST00000626682.1
CDS TCA 90 bp CGTGCGCTGAGGAGTCCCCGTCTGAACAGCCGTCGCCGTCCCAAGTaGAGCCGTCTGGGCAGCGCCACCCAGAACGAGCTGAGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: RALRSPRLNSRRRPK*SRLGSATQNELRLD
Trigger: GTCCAGCCTCAGCTCGTTCTGGGTGGCGCTGCCCAGACGGCTTCACTTGGGACGGCGACGGCTGTTCAGACGGGGACTCCTCAGCGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 90 bp CGTGCGCTGAGGAGTCCCCGTCTGAACAGCCGTCGCCGTCCCAAGTaGAGCCGTCTGGGCAGCGCCACCCAGAACGAGCTGAGGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RALRSPRLNSRRRPK*SRLGSATQNELRLL
Trigger: GAGCAGCCTCAGCTCGTTCTGGGTGGCGCTGCCCAGACGGCTTCACTTGGGACGGCGACGGCTGTTCAGACGGGGACTCCTCAGCGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS GCA 90 bp TACTCCGCCACGGAGCCCCAGCCGAGCAATGGGTGGAGAATGCTGTaGCCACAGCCGCCCCGGGCGGCGGGTAACAATAGCCTATGCCGC +
Preference number: 5 (lower is better)
Translates to: YSATEPQPSNGWRML*PQPPRAAGNNSLCR
Trigger: GCGGCATAGGCTATTGTTACCCGCCGCCCGGGGCGGCTGTGGGCACAGCATTCTCCACCCATTGCTCGGCTGGGGCTCCGTGGCGGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp CAATGCTCAGGCCAGGCCCTGCGGCGCAGGGAACCTGCCATCAAATaGCCGGGCCAGGCCCTGCGGTGCAGGGAGCCTGTCATCGAATCA +
Preference number: 5 (lower is better)
Translates to: QCSGQALRRREPAIK*PGQALRCREPVIES
Trigger: TGATTCGATGACAGGCTCCCTGCACCGCAGGGCCTGGCCCGGGCATTTGATGGCAGGTTCCCTGCGCCGCAGGGCCTGGCCTGAGCATTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp TTCCAGGTGCCTGTACGGTGGAGATCTGGACGGGAGGGGCACTTGTaGGGGTGGCAGGGCGAGGCGCCATGGTGGTCTGAGGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: FQVPVRWRSGREGHL*GWQGEAPWWSEAGH
Trigger: ATGCCCAGCCTCAGACCACCATGGCGCCTCGCCCTGCCACCCCCACAAGTGCCCCTCCCGTCCAGATCTCCACCGTACAGGCACCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS GCA 90 bp AGTATCGAAGCCAAATGCAGAGTCGCCGTCCGCGGAACCGCCCGGTaGAGGGTCTGCGCCACCCAAACGTCAGGCCCCACACGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SIEAKCRVAVRGTAR*RVCATQTSGPTRSA
Trigger: TGCTGACCGTGTGGGGCCTGACGTTTGGGTGGCGCAGACCCTGCACCGGGCGGTTCCGCGGACGGCGACTCTGCATTTGGCTTCGATACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 90 bp GCCGCGGAGTCGGGGGTCAGCTGTCTCAAGGCGGGTAAGCTCCTCTaGGTGGAAAGACAGACACGAGGGGTCAGGCGGCTGCTCATGCGT +
Preference number: 5 (lower is better)
Translates to: AAESGVSCLKAGKLL*VERQTRGVRRLLMR
Trigger: ACGCATGAGCAGCCGCCTGACCCCTCGTGTCTGTCTTTCCACCCAGAGGAGCTTACCCGCCTTGAGACAGCTGACCCCCGACTCCGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 90 bp TCCTTTACTCCGCCACGGAGCCCCAGCCGAGCAATGGGTGGAGAATaGTGTGCCCACAGCCGCCCCGGGCGGCGGGTAACAATAGCCTAT +
Preference number: 5 (lower is better)
Translates to: SFTPPRSPSRAMGGE*CAHSRPGRRVTIAY
Trigger: ATAGGCTATTGTTACCCGCCGCCCGGGGCGGCTGTGGGCACAGCATTCTCCACCCATTGCTCGGCTGGGGCTCCGTGGCGGAGTAAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp CACCGTGCAGGTGGCATGGCCGGGAGTGAGTCCCAGAGCCTCCCTTaGCTCAGTGTAAGCGCCGCACCACGAGATGAAGGGAGCGATGTC +
Preference number: 5 (lower is better)
Translates to: HRAGGMAGSESQSLP*LSVSAAPRDEGSDV
Trigger: GACATCGCTCCCTTCATCTCGTGGTGCGGCGCTTACACTGAGGCAAGGGAGGCTCTGGGACTCACTCCCGGCCATGCCACCTGCACGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CCA 90 bp CGGAGTCGGGGGTCAGCTGTCTCAAGGCGGGTAAGCTCCTCTGGGTaGAAAGACAGACACGAGGGGTCAGGCGGCTGCTCATGCGTCGGT +
Preference number: 5 (lower is better)
Translates to: RSRGSAVSRRVSSSG*KDRHEGSGGCSCVG
Trigger: ACCGACGCATGAGCAGCCGCCTGACCCCTCGTGTCTGTCTTTCCACCCAGAGGAGCTTACCCGCCTTGAGACAGCTGACCCCCGACTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS TCA 90 bp AGACAGGATCCACACAGTCAGGGCATCCGCGCCTTCAGGAGCAGATaGCAGCTGTGCTCACCCCTGCAAGCGGCCAGGGTGCCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: RQDPHSQGIRAFRSR*QLCSPLQAARVPRV
Trigger: GACTCTGGGCACCCTGGCCGCTTGCAGGGGTGAGCACAGCTGTCATCTGCTCCTGAAGGCGCGGATGCCCTGACTGTGTGGATCCTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436129.2
ENST00000628040.1
CDS GCA 90 bp ACCCAGAACGAGCTGAGGCTGGACGCCGGGCGAGCGCTGCAGGGTTaGACTGGGCTGCACCGTTGTCTGGGCCTGAGACACTTGCTTAAT +
Preference number: 5 (lower is better)
Translates to: TQNELRLDAGRALQG*TGLHRCLGLRHLLN
Trigger: ATTAAGCAAGTGTCTCAGGCCCAGACAACGGTGCAGCCCAGTGCAACCCTGCAGCGCTCGCCCGGCGTCCAGCCTCAGCTCGTTCTGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp GGCTGCCAGCGGACCAAGGCCTTCTGTGCCCAACCCACACGGCAGTaGCAGTGGCTTTCCTCCCTAGATTCATCCAAACCCCTCACGGGC +
Preference number: 5 (lower is better)
Translates to: GCQRTKAFCAQPTRQ*QWLSSLDSSKPLTG
Trigger: GCCCGTGAGGGGTTTGGATGAATCTAGGGAGGAAAGCCACTGCCACTGCCGTGTGGGTTGGGCACAGAAGGCCTTGGTCCGCTGGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 90 bp GCCGTGGCCAATTTATCTAAGAAGCGGGCGGGAGCAGAGGCACGGTaGGCTGTGCAGACCAGTCAGGCGCCCCTTCCATACCAGCGGTGT +
Preference number: 5 (lower is better)
Translates to: AVANLSKKRAGAEAR*AVQTSQAPLPYQRC
Trigger: ACACCGCTGGTATGGAAGGGGCGCCTGACTGGTCTGCACAGCCCACCGTGCCTCTGCTCCCGCCCGCTTCTTAGATAAATTGGCCACGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGTGGGTTGCCCCTGCTaGCCGACGCCGACCTGCGTG +
Preference number: 5 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAVGCPC*PTPTCV
Trigger: CACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCAC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGACCAGCGGTGTGGGTaGCCCCTGCTTGCCGACGCC +
Preference number: 5 (lower is better)
Translates to: LTTHSEGATFAGLGLYQADQRCG*PLLADA
Trigger: GGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCAGTGATGCCAGGGCTAGTGCTGTGAGGTaGGCGTCCCGCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: GTGQAWLAGVKDGASDARASAVR*ASRCLI
Trigger: AATGAGACAGCGGGACGCCAACCTCACAGCACTAGC...CCTGGCATCACTGGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS GCA 90 bp CACACTCCAGCCACCTCCGCCCCGAACGCGTACGTGCCCTCTCCGTaGCTAACCATTTACGGGGTGTCACACACACAAGGCCAGGTCACT +
Preference number: 5 (lower is better)
Translates to: HTPATSAPNAYVPSP*LTIYGVSHTQGQVT
Trigger: AGTGACCTGGCCTTGTGTGTGTGACACCCCGTAAATGGTTAGGCACGGAGAGGGCACGTACGCGTTCGGGGCGGAGGTGGCTGGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp CCAATTTATCTAAGAAGCGGGCGGGAGCAGAGGCACGGTGGGCTGTaGAGACCAGTCAGGCGCCCCTTCCATACCAGCGGTGTGGGTTGC +
Preference number: 5 (lower is better)
Translates to: PIYLRSGREQRHGGL*RPVRRPFHTSGVGC
Trigger: GCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGGTCTGCACAGCCCACCGTGCCTCTGCTCCCGCCCGCTTCTTAGATAAATTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp CAGGCTTCAGGGTGCAGGCAATGGATTGGATGCCCTGGATCCCACTaGCTGTGCTCTGCAGACTCACACGTGGTCAGGAGGAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: QASGCRQWIGCPGSH*LCSADSHVVRRSPG
Trigger: CCCTGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS TCA 90 bp GCGAGCCCACCAGGTCGCTCACCACTTTCTCGTCCACCTCGCTGTTaGAGAAGACCTCGTCCAGCAGATCCGAGCCCGCCGCCATCTTTT +
Preference number: 5 (lower is better)
Translates to: ASPPGRSPLSRPPRC*RRPRPADPSPPPSF
Trigger: AAAAGATGGCGGCGGGCTCGGATCTGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGAGAAAGTGGTGAGCGACCTGGTGGGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 90 bp TACAGAACCCTTCTAGAACGATGCTCTCACTACAGACGAGGGATGTaGGCGGCAGGTGGCAGCGTGGCGTGGCAGGCACCGTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YRTLLERCSHYRRGM*AAGGSVAWQAPCRW
Trigger: CCACCTGCACGGTGCCTGCCACGCCACGCTGCCACCTGCCGCTCACATCCCTCGTCTGTAGTGAGAGCATCGTTCTAGAAGGGTTCTGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS GCA 90 bp TCAGGGTGCAGGCAATGGATTGGATGCCCTGGATCCCACTGGCTGTaGTCTGCAGACTCACACGTGGTCAGGAGGAGCCCAGGGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SGCRQWIGCPGSHWL*SADSHVVRRSPGKQ
Trigger: CTGCTTCCCTGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp AGGCCCTGCGGTGCAGGGAGCCTGTCATCGAATCAGGGAGAAGCCTaGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATTGGA +
Preference number: 5 (lower is better)
Translates to: RPCGAGSLSSNQGEA*VLPPQASGCRQWIG
Trigger: TCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCAGGCTTCTCCCTGATTCGATGACAGGCTCCCTGCACCGCAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS-3UTR CAA 90 bp GGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCAGCTGGCCCACGCTAGTGCTGTGAGGTaGGCGTCCCGCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: GQNPSFTPQAQAQGQLAHASAVR*ASRCLI
Trigger: AATGAGACAGCGGGACGCCAACCTCACAGCACTAGC...GTGGGCCAGCTGGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS TCA 90 bp GGCGAGCGCTGCAGGGTTGCACTGGGCTGCACCGTTGTCTGGGCCTaGGACACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTGCA +
Preference number: 5 (lower is better)
Translates to: GERCRVALGCTVVWA*DTCLIMVVGVTCRA
Trigger: TGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACAACGGTGCAGCCCAGTGCAACCCTGCAGCGCTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 90 bp TCAGGAGCAGATGACAGCTGTGCTCACCCCTGCAAGCGGCCAGGGTaGCCAGAGTCTACAGTCAGACAAAAGGGAGCCCAGAGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: SGADDSCAHPCKRPG*PESTVRQKGAQSKR
Trigger: CCTCTTGCTCTGGGCTCCCTTTTGTCTGACTGTAGACTCTGGGCACCCTGGCCGCTTGCAGGGGTGAGCACAGCTGTCATCTGCTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436129.2
ENST00000628040.1
CDS GCA 90 bp GTGCAGGCAATGGATTGGATGCCCTGGATCCCACTGGCTGTGCTCTaGAGACTCACACGTGGTCAGGAGGAGCCCAGGGAAGCAGAATGC +
Preference number: 5 (lower is better)
Translates to: VQAMDWMPWIPLAVL*RLTRGQEEPREAEC
Trigger: GCATTCTGCTTCCCTGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 90 bp CTCAGTGTAAGCGCCGCACCACGAGATGAAGGGAGCGATGTCATCTaGTTCCCAGGGTGCGGTGAAAGTTACGGTCCATGTGCCGCAGGC +
Preference number: 5 (lower is better)
Translates to: LSVSAAPRDEGSDVI*FPGCGESYGPCAAG
Trigger: GCCTGCGGCACATGGACCGTAACTTTCACCGCACCCTGGGAAGCAGATGACATCGCTCCCTTCATCTCGTGGTGCGGCGCTTACACTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CCA 90 bp GACTTCCCCATGTGGCCAGCAGACGGCACCAGGAAACCACAGATGTaGCAAATACCCCAAGGCCACCAGGGCAAAGGGACAGAGGCGGTA +
Preference number: 5 (lower is better)
Translates to: DFPMWPADGTRKPQM*QIPQGHQGKGTEAV
Trigger: TACCGCCTCTGTCCCTTTGCCCTGGTGGCCTTGGGGTATTTGCCACATCTGTGGTTTCCTGGTGCCGTCTGCTGGCCACATGGGGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 90 bp AGGACAACTTCCGTCCTGCACACCAGCAAGGACCCGCTCAAGACCTaGACTTCCCCATGTGGCCAGCAGACGGCACCAGGAAACCACAGA +
Preference number: 5 (lower is better)
Translates to: RTTSVLHTSKDPLKT*TSPCGQQTAPGNHR
Trigger: TCTGTGGTTTCCTGGTGCCGTCTGCTGGCCACATGGGGAAGTCCAGGTCTTGAGCGGGTCCTTGCTGGTGTGCAGGACGGAAGTTGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 90 bp TCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATTGGATGCCCTaGATCCCACTGGCTGTGCTCTGCAGACTCACACGTGGTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SASTGFRVQAMDWMP*IPLAVLCRLTRGQE
Trigger: CTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp AGCCTGGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATTaGATGCCCTGGATCCCACTGGCTGTGCTCTGCAGACTCACACGT +
Preference number: 5 (lower is better)
Translates to: SLGSASTGFRVQAMD*MPWIPLAVLCRLTR
Trigger: ACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 90 bp GGAGAAGCCTGGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATaGATTGGATGCCCTGGATCCCACTGGCTGTGCTCTGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: GEAWVLPPQASGCRQ*IGCPGSHWLCSADS
Trigger: TGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCAGGCTTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS-3UTR CAA 90 bp GGCACAGGGCAAGCGTGGTTGGCAGGGGTGAAGGATGGGGCCAGTGATGCCAGGTTGTGCCAGTTCCTGTaGCTGCATCTCCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: GTGQAWLAGVKDGASDARLCQFL*LHLLCL
Trigger: AAGGCAAAGGAGATGCAGCAACAGGAACTGGCACAA...CCTGGCATCACTGGCCCCATCCTTCACCCCTGCCAACCACGCTTGCCCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CAA 90 bp GGGTGCATGGGGGTCAGAACCCATCATTCACTCCCCAAGCACAAGCCCAGGGCCGTCCCGCTGTCTCATTaGTGCCAGTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GCMGVRTHHSLPKHKPRAVPLSH*CQFLLL
Trigger: CAGCAACAGGAACTGGCACAAATGAGACAGCGGGAC...GGCCCTGGGCTTGTGCTTGGGGAGTGAATGATGGGTTCTGACCCCCATGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS GCA 90 bp GGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCTTACCTaGATGGTGACCATCCAGGACGCTCTCCCTGAGCCCGCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: GSHPMPGSKCPPHLT*MVTIQDALPEPAAY
Trigger: GTAAGCAGCGGGCTCAGGGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CAA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATGTCCCGCTGTCTCATTaGTGCCAGTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHVPLSH*CQFLLL
Trigger: CAGCAACAGGAACTGGCACAAATGAGACAGCGGGAC...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS TCA 90 bp CCAGAACGAGCTGAGGCTGCTCTGGGACACGCTCCTCTCTGCAGATaGAAACGCTGTTCTAGAAACCAGCGGCCACCAGGGTGGATACAG +
Preference number: 5 (lower is better)
Translates to: PERAEAALGHAPLCR*KRCSRNQRPPGWIQ
Trigger: CTGTATCCACCCTGGTGGCCGCTGGTTTCTAGAACAGCGTTTTCATCTGCAGAGAGGAGCGTGTCCCAGAGCAGCCTCAGCTCGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGACCCGCGTGATTCTTaGTCGCGTGAACTGTCTGGG +
Preference number: 5 (lower is better)
Translates to: LTTHSEGATFAGLGLYQADPRDS*SRELSG
Trigger: CCCAGACAGTTCACGCGACAAAGAATCACGCGGGTC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS TCA 90 bp ATCCAATGCCTGGTTCCAAGTGTCCTCCTCATCTTACCTGCATGGTaGCCATCCAGGACGCTCTCCCTGAGCCCGCTGCTTACTGAGTGC +
Preference number: 5 (lower is better)
Translates to: IQCLVPSVLLILPAW*PSRTLSLSPLLTEC
Trigger: GCACTCAGTAAGCAGCGGGCTCAGGGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGGACACTTGGAACCAGGCATTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS-3UTR CAA 90 bp CCTCCCATGGGGTGGGGCTCGCATCCAATGCCTGGTTCCAAGTGTCCTCCTCATTTGTGCCAGTTCCTGTaGCTGCATCTCCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: PPMGWGSHPMPGSKCPPHLCQFL*LHLLCL
Trigger: AAGGCAAAGGAGATGCAGCAACAGGAACTGGCACAA...ATGAGGAGGACACTTGGAACCAGGCATTGGATGCGAGCCCCACCCCATGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS TCA 90 bp AGTCCACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCTAGTGCTGTaGGGTTGGCGTCCCGCTGTCTCATTTGTGCCAGTTCCTGTTGCT +
Preference number: 5 (lower is better)
Translates to: SPLSSFSWARSLLVL*GWRPAVSFVPVPVA
Trigger: AGCAACAGGAACTGGCACAAATGAGACAGCGGGACGCCAACCTCACAGCACTAGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000474089.5
ENST00000627770.2
ENST00000628040.1
ENST00000628525.2
CDS GCA 90 bp CTAAAAGTAACTCCATTATCAAAGCCAGCACTGCAAGTGCGGTGCTaGAGGAGGTCACAGCGTGCCAGGGGCCACACAGACAGGATCCAC +
Preference number: 5 (lower is better)
Translates to: LKVTPLSKPALQVRC*RRSQRARGHTDRIH
Trigger: GTGGATCCTGTCTGTGTGGCCCCTGGCACGCTGTGACCTCCTGCAGCACCGCACTTGCAGTGCTGGCTTTGATAATGGAGTTACTTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000436129.2
ENST00000628040.1
CDS-3UTR CAA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGAGTCCCGCTGTCTCATTaGTGCCAGTTCCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRVPLSH*CQFLLL
Trigger: CAGCAACAGGAACTGGCACAAATGAGACAGCGGGAC...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS TCA 90 bp AAAACCAAGAAAGCCAGATCCAAACTGCACATAAGTGAACCGCTATaGGCAGCCGCGGCTTCGCCTCCCGGGACTCACCTAAATCCACCC +
Preference number: 5 (lower is better)
Translates to: KTKKARSKLHISEPL*AAAASPPGTHLNPP
Trigger: GGGTGGATTTAGGTGAGTCCCGGGAGGCGAAGCCGCGGCTGCTCATAGCGGTTCACTTATGTGCAGTTTGGATCTGGCTTTCTTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 90 bp CTTAGAAAGTTAGCATCACTTCCGGGAGGCCGAAGACAACGTGGCTaGCGAGCTGATGTCTCCCAGCCTCTCTTCCAAACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LRKLASLPGGRRQRG*RADVSQPLFQTQFS
Trigger: GCTGAACTGTGTTTGGAAGAGAGGCTGGGAGACATCAGCTCGGCAGCCACGTTGTCTTCGGCCTCCCGGAAGTGATGCTAACTTTCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 90 bp GGCCTGAGACACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTaGAATGATAGGTGTTCCAGGTGCCTGTACGGTGGAGATCTGGAC +
Preference number: 5 (lower is better)
Translates to: GLRHLLNYGSWGHLP*NDRCSRCLYGGDLD
Trigger: GTCCAGATCTCCACCGTACAGGCACCTGGAACACCTATCATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 90 bp CTGCACCGTTGTCTGGGCCTGAGACACTTGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAATGATAGGTGTTCCAGGTGCCTGTAC +
Preference number: 5 (lower is better)
Translates to: LHRCLGLRHLLNYGS*GHLPCNDRCSRCLY
Trigger: GTACAGGCACCTGGAACACCTATCATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACAACGGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGGGTGCAACGATGAATaGTGTATTCCTCCAGGATTC +
Preference number: 5 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAGCNDE*CIPPGF
Trigger: GAATCCTGGAGGAATACACAATTCATCGTTGCACCC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS GCA 90 bp GCAGGAGGGGTCCAGACTCCCTGTCTTTCCCATAGGGTCTTTGCTTaGAGAATTCTATGTGGATTTTGGCTCCCGCAGAGAGTTTGTTGC +
Preference number: 5 (lower is better)
Translates to: AGGVQTPCLSHRVFA*RILCGFWLPQRVCC
Trigger: GCAACAAACTCTCTGCGGGAGCCAAAATCCACATAGAATTCTGCAAGCAAAGACCCTATGGGAAAGACAGGGAGTCTGGACCCCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS-3UTR CAA 90 bp CTGACCACACATTCAGAAGGAGCCACCTTTGCTGGGCTCGGCCTCTACCAAGCAGCAGCAGTGAATGGCTaGTCTCACGTTCATTTTCTA +
Preference number: 5 (lower is better)
Translates to: LTTHSEGATFAGLGLYQAAAVNG*SHVHFL
Trigger: TAGAAAATGAACGTGAGACAAGCCATTCACTGCTGC...TGCTTGGTAGAGGCCGAGCCCAGCAAAGGTGGCTCCTTCTGAATGTGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp CTCGGCCTCTACCAAGCAGAAATGCGATTACACTCTGAGGTGGGGGTGCAACGATACAAAGAAGGGGCTTaGCTCTGGACGTCTGTAAAG +
Preference number: 5 (lower is better)
Translates to: LGLYQAEMRLHSEVGVQRYKEGA*LWTSVK
Trigger: CTTTACAGACGTCCAGAGCAAAGCCCCTTCTTTGTA...TCGTTGCACCCCCACCTCAGAGTGTAATCGCATTTCTGCTTGGTAGAGGCCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS TCA 90 bp TATGTGGATTTTGGCTCCCGCAGAGAGTTTGTTGCTAAACTGCTCTaGAGATGGAGTGGAGATCTCGTAGGAACCTCCCCCTCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: YVDFGSRREFVAKLL*RWSGDLVGTSPSLL
Trigger: GAGAAGAGAGGGGGAGGTTCCTACGAGATCTCCACTCCATCTTCAGAGCAGTTTAGCAACAAACTCTCTGCGGGAGCCAAAATCCACATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS TCA 90 bp GGGACGTGCCGGTGGTTCAAAGCCAACTCAACTATTTCATTTTACTaGGACAAAATACAACATCCCAGGGCCTCAACCTCTGGTTTCTAT +
Preference number: 5 (lower is better)
Translates to: GTCRWFKANSTISFY*DKIQHPRASTSGFY
Trigger: ATAGAAACCAGAGGTTGAGGCCCTGGGATGTTGTATTTTGTCTCAGTAAAATGAAATAGTTGAGTTGGCTTTGAACCACCGGCACGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS TCA 90 bp TACGGTCCATGTGCCGCAGGCTGCTTCTGCTTCAGACATGCCTTATaGTCAAGTACTAGTAAGGACATAGTTTTAATGCTTCCAACATGG +
Preference number: 5 (lower is better)
Translates to: YGPCAAGCFCFRHAL*SSTSKDIVLMLPTW
Trigger: CCATGTTGGAAGCATTAAAACTATGTCCTTACTAGTACTTGATCATAAGGCATGTCTGAAGCAGAAGCAGCCTGCGGCACATGGACCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCGCTAGTGCTGTGAGGTaGGCGTCCCGCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVASAVR*ASRCLI
Trigger: AATGAGACAGCGGGACGCCAACCTCACAGCACTAGC...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAACAGCAGAAAGGGCTTaGGTTCCAGGTAACACGGCG +
Preference number: 5 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKTAERA*VPGNTA
Trigger: CGCCGTGTTACCTGGAACCAAAGCCCTTTCTGCTGT...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCTCTCTGCAAAGGCGCTaGGAGGAGGAAGGTTTCATC +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVSLQRR*EEEGFI
Trigger: GATGAAACCTTCCTCCTCCAAGCGCCTTTGCAGAGA...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp ACACCAACCATTTTTCAACACTTGATTCACACCGAGAAACAGTCTTTTGATGATGTCTTGACCGAGACTTaGCTGCCCTCATCAGGATCT +
Preference number: 5 (lower is better)
Translates to: TPTIFQHLIHTEKQSFDDVLTET*LPSSGS
Trigger: AGATCCTGATGAGGGCAGCAAAGTCTCGGTCAAGAC...ATCATCAAAAGACTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGTTGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCCTGGATCTTCTTGTCTaGACCGAGACTTTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVLDLLV*TETLLP
Trigger: GGGCAGCAAAGTCTCGGTCAAGACAAGAAGATCCAG...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATGAGGTCCCTGAGGTaGACCCGCGTGATTCTTTGT +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVMRSLR*TRVILC
Trigger: ACAAAGAATCACGCGGGTCAACCTCAGGGACCTCAT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAATTGTGCCAGTTCCTGTaGCTGCATCTCCTTTGCCTT +
Preference number: 5 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKLCQFL*LHLLCL
Trigger: AAGGCAAAGGAGATGCAGCAACAGGAACTGGCACAA...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCAGTATCCACAGGCCTTaGTGTTCTCTCTGTTACAGA +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVSIHRP*CSLCYR
Trigger: TCTGTAACAGAGAGAACACAAAGGCCTGTGGATACT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp AAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCATAAAAGTCTTTATATATGGCTaGTTTGGCAGGAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: KSNVRIHTEKARVFTVIKVFIYG*FGRKAT
Trigger: AGTGGCCTTCCTGCCAAACAAGCCATATATAAAGAC...TTTTATGACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS-3UTR CAA 90 bp GAATTAAAGTCTAATGTGAGAATTCACACGGAGAAAGCCAGAGTATTTACAGTCACCATTTTTCAACACTaGATTCACACCGAGAAACAG +
Preference number: 5 (lower is better)
Translates to: ELKSNVRIHTEKARVFTVTIFQH*IHTEKQ
Trigger: CTGTTTCTCGGTGTGAATCAAGTGTTGAAAAATGGT...GACTGTAAATACTCTGGCTTTCTCCGTGTGAATTCTCACATTAGACTTTAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627770.2
CDS TCA 90 bp CACTCTCAATACAGGAAAATCTGCTTAAGTGTGCACTTAAGGATATaGAAATCATCACCTCAAATCAGAACCTCAAAAACTAGGAGACAA +
Preference number: 5 (lower is better)
Translates to: HSQYRKICLSVHLRI*KSSPQIRTSKTRRQ
Trigger: TTGTCTCCTAGTTTTTGAGGTTCTGATTTGAGGTGATGATTTTCATATCCTTAAGTGCACACTTAAGCAGATTTTCCTGTATTGAGAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 90 bp CTGTTTCTGATATTTTCTCTACAAGATTCTGTAGCCTTTGTTGCGTaGCATGTGATACATAACTTACTACATCTGGATGTAATTCCGTTA +
Preference number: 5 (lower is better)
Translates to: LFLIFSLQDSVAFVA*HVIHNLLHLDVIPL
Trigger: TAACGGAATTACATCCAGATGTAGTAAGTTATGTATCACATGCCACGCAACAAAGGCTACAGAATCTTGTAGAGAAAATATCAGAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS CAA 90 bp CCCGGGGGCGGGCGGCGGGACGGCGGCCGGGCTGGGCAGCGCCCCTaGCATAGTTGGCCCGATGACCATGCTGGCCGCCGTGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: PGGGRRDGGRAGQRP*HSWPDDHAGRRAGR
Trigger: CCGGCCAGCACGGCGGCCAGCATGGTCATCGGGCCAACTATGCAAGGGGCGCTGCCCAGCCCGGCCGCCGTCCCGCCGCCCGCCCCCGGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp CGCACCTCGGGCGTGCGCGGCGCGAGGTGGTGGTGGTaGGCCGCGCTGGCCGCCAGCTGCGACTCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: RTSGVRGARWWW*AALAASCDSSE
Trigger: CTCGCTGGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGCCCGAGGTGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 72 bp GGTGGCCGTGGGCGTCCGGGACAGGCTCTGGGTCACTaGGCCGGCCGCGCCTTTGGGCAGCCCGGTGGGGGT +
Preference number: 6 (lower is better)
Translates to: GGRGRPGQALGH*AGRAFGQPGGG
Trigger: ACCCCCACCGGGCTGCCCAAAGGCGCGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp GCGTGCGCGGCGCGAGGTGGTGGTGGTGGGCCGCGCTaGCCGCCAGCTGCGACTCCAGCGAGCCCACCAGGT +
Preference number: 6 (lower is better)
Translates to: ACAARGGGGGPR*PPAATPASPPG
Trigger: ACCTGGTGGGCTCGCTGGAGTCGCAGCTGGCGGCCAGCGCGGCCCACCACCACCACCTCGCGCCGCGCACGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp CCGCTGGTGGTGGCCGTGGGCGTCCGGGACAGGCTCTaGGTCACTGCGCCGGCCGCGCCTTTGGGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: PLVVAVGVRDRL*VTAPAAPLGSP
Trigger: CGGGCTGCCCAAAGGCGCGGCCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CAA 72 bp GCGGGCTTGGGCAGCGGCAGCAGCGCGGCGGGCCCGTaGTTGACCAGGCTGACAGCAGGTGCGGCGGCGTGG +
Preference number: 6 (lower is better)
Translates to: AGLGSGSSAAGP*LTRLTAGAAAW
Trigger: CCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGCCGCGCTGCTGCCGCTGCCCAAGCCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp GACGGCGGCCGGGCTGGGCAGCGCCCCTTGCATAGTTaGCCCGATGACCATGCTGGCCGCCGTGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: DGGRAGQRPLHS*PDDHAGRRAGR
Trigger: CCGGCCAGCACGGCGGCCAGCATGGTCATCGGGCCAACTATGCAAGGGGCGCTGCCCAGCCCGGCCGCCGTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp GCGTCAGGGTGGCCCGAATCCCGCTGGTGGTGGCCGTaGGCGTCCGGGACAGGCTCTGGGTCACTGCGCCGG +
Preference number: 6 (lower is better)
Translates to: ASGWPESRWWWP*ASGTGSGSLRR
Trigger: CCGGCGCAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGCCACCCTGACGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp CCAGCACGGTGGGCGTCAGGGTGGCCCGAATCCCGCTaGTGGTGGCCGTGGGCGTCCGGGACAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: PARWASGWPESR*WWPWASGTGSG
Trigger: CCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGCCACCCTGACGCCCACCGTGCTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CAA 72 bp GGCTTGGGCAGCGGCAGCAGCGCGGCGGGCCCGTTGTaGACCAGGCTGACAGCAGGTGCGGCGGCGTGGTGC +
Preference number: 6 (lower is better)
Translates to: GLGSGSSAAGPL*TRLTAGAAAWC
Trigger: GCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGCCGCGCTGCTGCCGCTGCCCAAGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 72 bp CCGTGCGCTGGACCGAGCTACTCAGCACCACGGCCGTaGGCGCAGTGGTGGCCTGCGAGGTGGGCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: PCAGPSYSAPRP*AQWWPARWAVA
Trigger: CGCCACCGCCCACCTCGCAGGCCACCACTGCGCTCACGGCCGTGGTGCTGAGTAGCTCGGTCCAGCGCACGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp CGCGGCGGGCCCGTTGTTGACCAGGCTGACAGCAGGTaGGGCGGCGTGGTGCGAGTTCAGCAGCGCGGCGCT +
Preference number: 6 (lower is better)
Translates to: RGGPVVDQADSR*GGVVRVQQRGA
Trigger: AGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGGGCCCGCCGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp CGGTGGGCGTCAGGGTGGCCCGAATCCCGCTGGTGGTaGCCGTGGGCGTCCGGGACAGGCTCTGGGTCACTG +
Preference number: 6 (lower is better)
Translates to: RWASGWPESRWW*PWASGTGSGSL
Trigger: CAGTGACCCAGAGCCTGTCCCGGACGCCCACGGCCACCACCAGCGGGATTCGGGCCACCCTGACGCCCACCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp GTGGTGGCCTGCGAGGTGGGCGGTGGCGGCTGCTGCTaGCTCTGCTGGATGAAGGCCGCGGAGTCGGGGGTC +
Preference number: 6 (lower is better)
Translates to: VVACEVGGGGCC*LCWMKAAESGV
Trigger: GACCCCCGACTCCGCGGCCTTCATCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCTCGCAGGCCACCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS CCA 72 bp CGCCACCCAAACGTCAGGCCCCACACGGTCAGCACCTaGGGGCTGTCCGGGAGGAGCGCGTCTGCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RHPNVRPHTVST*GLSGRSASAPG
Trigger: CCCGGGAGCAGACGCGCTCCTCCCGGACAGCCCCCAGGTGCTGACCGTGTGGGGCCTGACGTTTGGGTGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp GCCTGCGAGGTGGGCGGTGGCGGCTGCTGCTGGCTCTaGTGGATGAAGGCCGCGGAGTCGGGGGTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: ACEVGGGGCCWL*WMKAAESGVSC
Trigger: ACAGCTGACCCCCGACTCCGCGGCCTTCATCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCTCGCAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp AGCGCAGTGGTGGCCTGCGAGGTGGGCGGTGGCGGCTaGTGCTGGCTCTGCTGGATGAAGGCCGCGGAGTCG +
Preference number: 6 (lower is better)
Translates to: SAVVACEVGGGG*CWLCWMKAAES
Trigger: CGACTCCGCGGCCTTCATCCAGCAGAGCCAGCAGCAGCCGCCACCGCCCACCTCGCAGGCCACCACTGCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp CCGCCACGGAGCCCCAGCCGAGCAATGGGTGGAGAATaGTGTGCCCACAGCCGCCCCGGGCGGCGGGTAACA +
Preference number: 6 (lower is better)
Translates to: PPRSPSRAMGGE*CAHSRPGRRVT
Trigger: TGTTACCCGCCGCCCGGGGCGGCTGTGGGCACAGCATTCTCCACCCATTGCTCGGCTGGGGCTCCGTGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp CTGGTCACGGTGGCCGCCGTCTTCCCGGCCGTGCGCTaGACCGAGCTACTCAGCACCACGGCCGTGAGCGCA +
Preference number: 6 (lower is better)
Translates to: LVTVAAVFPAVR*TELLSTTAVSA
Trigger: TGCGCTCACGGCCGTGGTGCTGAGTAGCTCGGTCCAGCGCACGGCCGGGAAGACGGCGGCCACCGTGACCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000609041.1
ENST00000625376.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp GGAGGCTGCTGGATGACCAGCGGTGTGGGTTGCCCCTaGTTGCCGACGCCGACCTGCGTGGGCTGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GGCWMTSGVGCP*LPTPTCVGCVR
Trigger: CCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTCATCCAGCAGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp GGCTTCGGAGGCTGCTGGATGACCAGCGGTGTGGGTTaGCCCTGCTTGCCGACGCCGACCTGCGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GFGGCWMTSGVG*PCLPTPTCVGC
Trigger: GCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTCATCCAGCAGCCTCCGAAGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS GCA 72 bp CCACAGCCGCCCCGGGCGGCGGGTAACAATAGCCTATaGCGCACACACTCCAGCCACCTCCGCCCCGAACGC +
Preference number: 6 (lower is better)
Translates to: PQPPRAAGNNSL*RTHSSHLRPER
Trigger: GCGTTCGGGGCGGAGGTGGCTGGAGTGTGTGCGGCATAGGCTATTGTTACCCGCCGCCCGGGGCGGCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp AGAGTCGCCGTCCGCGGAACCGCCCGGTGCAGGGTCTaGGCCACCCAAACGTCAGGCCCCACACGGTCAGCA +
Preference number: 6 (lower is better)
Translates to: RVAVRGTARCRV*ATQTSGPTRSA
Trigger: TGCTGACCGTGTGGGGCCTGACGTTTGGGTGGCGCAGACCCTGCACCGGGCGGTTCCGCGGACGGCGACTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp CCAGTCAGGCGCCCCTTCCATACCAGCGGTGTGGGTTaGCCCTGCTTGCCGACGCCGACCTGCGTGGGCTGC +
Preference number: 6 (lower is better)
Translates to: PVRRPFHTSGVG*PCLPTPTCVGC
Trigger: GCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp CGGTGGAGATCTGGACGGGAGGGGCACTTGTGGGGGTaGCAGGGCGAGGCGCCATGGTGGTCTGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RWRSGREGHLWG*QGEAPWWSEAG
Trigger: CCCAGCCTCAGACCACCATGGCGCCTCGCCCTGCCACCCCCACAAGTGCCCCTCCCGTCCAGATCTCCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS CAA 72 bp GGCTGCTGGATGACCAGCGGTGTGGGTTGCCCCTGCTaGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: GCWMTSGVGCPC*PTPTCVGCVRL
Trigger: CAGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTCATCCAGCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS CAA 72 bp CGCCCCTTCCATACCAGCGGTGTGGGTTGCCCCTGCTaGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCTG +
Preference number: 6 (lower is better)
Translates to: RPFHTSGVGCPC*PTPTCVGCVRL
Trigger: CAGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp GGCTTCGGAGGCTGCTGGATGACCAGCGGTGTGGGTTGCCCCTGCTaGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCTGAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: GFGGCWMTSGVGCPC*PTPTCVGCVRLSTG
Trigger: CCCTGTGCTCAGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTCATCCAGCAGCCTCCGAAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS CAA 90 bp CCAGTCAGGCGCCCCTTCCATACCAGCGGTGTGGGTTGCCCCTGCTaGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCTGAGCACAGGG +
Preference number: 6 (lower is better)
Translates to: PVRRPFHTSGVGCPC*PTPTCVGCVRLSTG
Trigger: CCCTGTGCTCAGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp GCTGTGCAGACCAGTCAGGCGCCCCTTCCATACCAGCGGTGTGGGTaGCCCCTGCTTGCCGACGCCGACCTGCGTGGGCTGCGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: AVQTSQAPLPYQRCG*PLLADADLRGLREA
Trigger: AGCCTCACGCAGCCCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGGTCTGCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp GCCAAATGCAGAGTCGCCGTCCGCGGAACCGCCCGGTaGAGGGTCTGCGCCACCCAAACGTCAGGCCCCACA +
Preference number: 6 (lower is better)
Translates to: AKCRVAVRGTAR*RVCATQTSGPT
Trigger: TGTGGGGCCTGACGTTTGGGTGGCGCAGACCCTGCACCGGGCGGTTCCGCGGACGGCGACTCTGCATTTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp CCGCCCAGCCCCTGCTGGGCCCCTCGTGGCAGGGTCTaGCCAGCTCTGCTGTCATCCTGCCTCTCACTCTCA +
Preference number: 6 (lower is better)
Translates to: PPSPCWAPRGRV*PALLSSCLSLS
Trigger: TGAGAGTGAGAGGCAGGATGACAGCAGAGCTGGGCAGACCCTGCCACGAGGGGCCCAGCAGGGGCTGGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp GCAGACCAGTCAGGCGCCCCTTCCATACCAGCGGTGTaGGTTGCCCCTGCTTGCCGACGCCGACCTGCGTGG +
Preference number: 6 (lower is better)
Translates to: ADQSGAPSIPAV*VAPACRRRPAW
Trigger: CCACGCAGGTCGGCGTCGGCAAGCAGGGGCAACCCACACCGCTGGTATGGAAGGGGCGCCTGACTGGTCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp TGGCAGCGTGGCGTGGCAGGCACCGTGCAGGTGGCATaGCCGGGAGTGAGTCCCAGAGCCTCCCTTGCCTCA +
Preference number: 6 (lower is better)
Translates to: WQRGVAGTVQVA*PGVSPRASLAS
Trigger: TGAGGCAAGGGAGGCTCTGGGACTCACTCCCGGCCATGCCACCTGCACGGTGCCTGCCACGCCACGCTGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CCA 72 bp ACTACAGACGAGGGATGTGAGCGGCAGGTGGCAGCGTaGCGTGGCAGGCACCGTGCAGGTGGCATGGCCGGG +
Preference number: 6 (lower is better)
Translates to: TTDEGCERQVAA*RGRHRAGGMAG
Trigger: CCCGGCCATGCCACCTGCACGGTGCCTGCCACGCCACGCTGCCACCTGCCGCTCACATCCCTCGTCTGTAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CAA 90 bp GTGTTCCAGGTGCCTGTACGGTGGAGATCTGGACGGGAGGGGCACTaGTGGGGGTGGCAGGGCGAGGCGCCATGGTGGTCTGAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VFQVPVRWRSGREGH*WGWQGEAPWWSEAG
Trigger: CCCAGCCTCAGACCACCATGGCGCCTCGCCCTGCCACCCCCACAAGTGCCCCTCCCGTCCAGATCTCCACCGTACAGGCACCTGGAACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS TCA 72 bp ACCATCCAGGACGCTCTCCCTGAGCCCGCTGCTTACTaGGTGCCACGGAGGCCTCTGCTCCTGAGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: TIQDALPEPAAY*VPRRPLLLSPA
Trigger: GGCCGGGCTCAGGAGCAGAGGCCTCCGTGGCACTCAGTAAGCAGCGGGCTCAGGGAGAGCGTCCTGGATGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS GCA 72 bp TGGCAGCTGAGGAAGTGGTGGTCGCCCCTGGTACCGTaGGCTGAGGAGTCCCCGTCTGAACAGCCGTCGCCG +
Preference number: 6 (lower is better)
Translates to: WQLRKWWSPLVP*AEESPSEQPSP
Trigger: CGGCGACGGCTGTTCAGACGGGGACTCCTCAGCGCACGGTACCAGGGGCGACCACCACTTCCTCAGCTGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000486599.1
CDS GCA 72 bp ACGGAGCCCCAGCCGAGCAATGGGTGGAGAATGCTGTaGCCACAGCCGCCCCGGGCGGCGGGTAACAATAGC +
Preference number: 6 (lower is better)
Translates to: TEPQPSNGWRML*PQPPRAAGNNS
Trigger: GCTATTGTTACCCGCCGCCCGGGGCGGCTGTGGGCACAGCATTCTCCACCCATTGCTCGGCTGGGGCTCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp CCTGTACGGTGGAGATCTGGACGGGAGGGGCACTTGTaGGGGTGGCAGGGCGAGGCGCCATGGTGGTCTGAG +
Preference number: 6 (lower is better)
Translates to: PVRWRSGREGHL*GWQGEAPWWSE
Trigger: CTCAGACCACCATGGCGCCTCGCCCTGCCACCCCCACAAGTGCCCCTCCCGTCCAGATCTCCACCGTACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS TCA 72 bp AGGAGTCCCCGTCTGAACAGCCGTCGCCGTCCCAAGTaGAGCCGTCTGGGCAGCGCCACCCAGAACGAGCTG +
Preference number: 6 (lower is better)
Translates to: RSPRLNSRRRPK*SRLGSATQNEL
Trigger: CAGCTCGTTCTGGGTGGCGCTGCCCAGACGGCTTCACTTGGGACGGCGACGGCTGTTCAGACGGGGACTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000609045.1
CDS CCA 72 bp CCGTTGTTGACCAGGCTGACAGCAGGTGCGGCGGCGTaGTGCGAGTTCAGCAGCGCGGCGCTCCCATTCAAA +
Preference number: 6 (lower is better)
Translates to: PLLTRLTAGAAA*CEFSSAALPFK
Trigger: TTTGAATGGGAGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS GCA 72 bp CGAGGACCATTCCTGGGTAGAGACTGCCCCTCGGCCTaGTCCAGCCACGGGCCTACGGGACAGATGACCTTA +
Preference number: 6 (lower is better)
Translates to: RGPFLGRDCPSA*SSHGPTGQMTL
Trigger: TAAGGTCATCTGTCCCGTAGGCCCGTGGCTGGAGCAGGCCGAGGGGCAGTCTCTACCCAGGAATGGTCCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000608887.1
CDS GCA 72 bp GCCACCTCCGCCCCGAACGCGTACGTGCCCTCTCCGTaGCTAACCATTTACGGGGTGTCACACACACAAGGC +
Preference number: 6 (lower is better)
Translates to: ATSAPNAYVPSP*LTIYGVSHTQG
Trigger: GCCTTGTGTGTGTGACACCCCGTAAATGGTTAGGCACGGAGAGGGCACGTACGCGTTCGGGGCGGAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp GCAGGGACTGGTCATGGAGCCTCTGACGCATGGCGCTaGAGACAGCCCTCGCCCCATCACAGGGCTCTCAAA +
Preference number: 6 (lower is better)
Translates to: AGTGHGASDAWR*RQPSPHHRALK
Trigger: TTTGAGAGCCCTGTGATGGGGCGAGGGCTGTCTGCAGCGCCATGCGTCAGAGGCTCCATGACCAGTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp TCGGGGGTCAGCTGTCTCAAGGCGGGTAAGCTCCTCTaGGTGGAAAGACAGACACGAGGGGTCAGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: SGVSCLKAGKLL*VERQTRGVRRL
Trigger: CAGCCGCCTGACCCCTCGTGTCTGTCTTTCCACCCAGAGGAGCTTACCCGCCTTGAGACAGCTGACCCCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS TCA 72 bp CCAGGTCGCTCACCACTTTCTCGTCCACCTCGCTGTTaGAGAAGACCTCGTCCAGCAGATCCGAGCCCGCCG +
Preference number: 6 (lower is better)
Translates to: PGRSPLSRPPRC*RRPRPADPSPP
Trigger: CGGCGGGCTCGGATCTGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGAGAAAGTGGTGAGCGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 72 bp CCTCCCTTGCCTCAGTGTAAGCGCCGCACCACGAGATaGAGGGAGCGATGTCATCTGCTTCCCAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: PPLPQCKRRTTR*RERCHLLPRVR
Trigger: CCGCACCCTGGGAAGCAGATGACATCGCTCCCTTCATCTCGTGGTGCGGCGCTTACACTGAGGCAAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS TCA 72 bp CTTCTAGAACGATGCTCTCACTACAGACGAGGGATGTaGGCGGCAGGTGGCAGCGTGGCGTGGCAGGCACCG +
Preference number: 6 (lower is better)
Translates to: LLERCSHYRRGM*AAGGSVAWQAP
Trigger: CGGTGCCTGCCACGCCACGCTGCCACCTGCCGCTCACATCCCTCGTCTGTAGTGAGAGCATCGTTCTAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS GCA 72 bp TTGTTGACCAGGCTGACAGCAGGTGCGGCGGCGTGGTaGGAGTTCAGCAGCGCGGCGCTCCCATTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: LLTRLTAGAAAW*EFSSAALPFKV
Trigger: AACTTTGAATGGGAGCGCCGCGCTGCTGAACTCGCACCACGCCGCCGCACCTGCTGTCAGCCTGGTCAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp GGGTCAGCTGTCTCAAGGCGGGTAAGCTCCTCTGGGTaGAAAGACAGACACGAGGGGTCAGGCGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: GSAVSRRVSSSG*KDRHEGSGGCS
Trigger: TGAGCAGCCGCCTGACCCCTCGTGTCTGTCTTTCCACCCAGAGGAGCTTACCCGCCTTGAGACAGCTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp AGCGAGCCCACCAGGTCGCTCACCACTTTCTCGTCCACCTCGCTGTaGAAGAAGACCTCGTCCAGCAGATCCGAGCCCGCCGCCATCTTT +
Preference number: 6 (lower is better)
Translates to: SEPTRSLTTFSSTSL*KKTSSSRSEPAAIF
Trigger: AAAGATGGCGGCGGGCTCGGATCTGCTGGACGAGGTCTTCTTCAACAGCGAGGTGGACGAGAAAGTGGTGAGCGACCTGGTGGGCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS TCA 72 bp TCTTACCTGCATGGTGACCATCCAGGACGCTCTCCCTaGGCCCGCTGCTTACTGAGTGCCACGGAGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SYLHGDHPGRSP*ARCLLSATEAS
Trigger: AGAGGCCTCCGTGGCACTCAGTAAGCAGCGGGCTCAGGGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS TCA 72 bp GACGGGAAGGGGTTGTCAAGGCAACACAGCATGTCCTaGGAGGAGCCCTTTGGCCACTGGGTGGTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: DGKGLSRQHSMS*EEPFGHWVVRQ
Trigger: CTGCCTCACCACCCAGTGGCCAAAGGGCTCCTCTCAGGACATGCTGTGTTGCCTTGACAACCCCTTCCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp CAGCAAGGACCCGCTCAAGACCTGGACTTCCCCATGTaGCCAGCAGACGGCACCAGGAAACCACAGATGTGG +
Preference number: 6 (lower is better)
Translates to: QQGPAQDLDFPM*PADGTRKPQMW
Trigger: CCACATCTGTGGTTTCCTGGTGCCGTCTGCTGGCCACATGGGGAAGTCCAGGTCTTGAGCGGGTCCTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp CTGGATCCCACTGGCTGTGCTCTGCAGACTCACACGTaGTCAGGAGGAGCCCAGGGAAGCAGAATGCAGAGG +
Preference number: 6 (lower is better)
Translates to: LDPTGCALQTHT*SGGAQGSRMQR
Trigger: CCTCTGCATTCTGCTTCCCTGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp GGGTGCAGGCAATGGATTGGATGCCCTGGATCCCACTaGCTGTGCTCTGCAGACTCACACGTGGTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: GCRQWIGCPGSH*LCSADSHVVRR
Trigger: CCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp GGTGCAGGGAGCCTGTCATCGAATCAGGGAGAAGCCTaGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAA +
Preference number: 6 (lower is better)
Translates to: GAGSLSSNQGEA*VLPPQASGCRQ
Trigger: TTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCAGGCTTCTCCCTGATTCGATGACAGGCTCCCTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp AAGCCTGGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATaGGATGCCCTGGATCCCACTGGCTGTGCTCTGCAGACTCACACG +
Preference number: 6 (lower is better)
Translates to: KPGFCLHRLQGAGNG*DALDPTGCALQTHT
Trigger: CGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCAGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp GAAAGGGCCGGGAGAACTGGAGGACAACTTCCGTCCTaGACACCAGCAAGGACCCGCTCAAGACCTGGACTT +
Preference number: 6 (lower is better)
Translates to: ERAGRTGGQLPS*TPARTRSRPGL
Trigger: AAGTCCAGGTCTTGAGCGGGTCCTTGCTGGTGTGCAGGACGGAAGTTGTCCTCCAGTTCTCCCGGCCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp ATGGATTGGATGCCCTGGATCCCACTGGCTGTGCTCTaGAGACTCACACGTGGTCAGGAGGAGCCCAGGGAA +
Preference number: 6 (lower is better)
Translates to: MDWMPWIPLAVL*RLTRGQEEPRE
Trigger: TTCCCTGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp AGGCAATGGATTGGATGCCCTGGATCCCACTGGCTGTaGTCTGCAGACTCACACGTGGTCAGGAGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: RQWIGCPGSHWL*SADSHVVRRSP
Trigger: TGGGCTCCTCCTGACCACGTGTGAGTCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp CGAGATGAAGGGAGCGATGTCATCTGCTTCCCAGGGTaGGGTGAAAGTTACGGTCCATGTGCCGCAGGCTGC +
Preference number: 6 (lower is better)
Translates to: RDEGSDVICFPG*GESYGPCAAGC
Trigger: GCAGCCTGCGGCACATGGACCGTAACTTTCACCGCACCCTGGGAAGCAGATGACATCGCTCCCTTCATCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CCA 72 bp GAAGTTCTGGGTCCTGCAGGAAAGGGCCGGGAGAACTaGAGGACAACTTCCGTCCTGCACACCAGCAAGGAC +
Preference number: 6 (lower is better)
Translates to: EVLGPAGKGREN*RTTSVLHTSKD
Trigger: GTCCTTGCTGGTGTGCAGGACGGAAGTTGTCCTCCAGTTCTCCCGGCCCTTTCCTGCAGGACCCAGAACTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp AATTTATCTAAGAAGCGGGCGGGAGCAGAGGCACGGTaGGCTGTGCAGACCAGTCAGGCGCCCCTTCCATAC +
Preference number: 6 (lower is better)
Translates to: NLSKKRAGAEAR*AVQTSQAPLPY
Trigger: GTATGGAAGGGGCGCCTGACTGGTCTGCACAGCCCACCGTGCCTCTGCTCCCGCCCGCTTCTTAGATAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp TCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATTaGATGCCCTGGATCCCACTGGCTGTGCTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SASTGFRVQAMD*MPWIPLAVLCR
Trigger: TCTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp TGGGTTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATaGATTGGATGCCCTGGATCCCACTGGCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: WVLPPQASGCRQ*IGCPGSHWLCS
Trigger: AGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 72 bp GCAGCAGCTGCTTGTGCCGAGACAGCAGAAAGGGCTTaGGTTCCAGGTAACACGGCGGGTTTCACCACAGGG +
Preference number: 6 (lower is better)
Translates to: AAAACAETAERA*VPGNTAGFTTG
Trigger: CCCTGTGGTGAAACCCGCCGTGTTACCTGGAACCAAAGCCCTTTCTGCTGTCTCGGCACAAGCAGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000488539.1
ENST00000626682.1
ENST00000627770.2
ENST00000628040.1
CDS CAA 72 bp TTCTGCCTCCACAGGCTTCAGGGTGCAGGCAATGGATaGGATGCCCTGGATCCCACTGGCTGTGCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: FCLHRLQGAGNG*DALDPTGCALQ
Trigger: CTGCAGAGCACAGCCAGTGGGATCCAGGGCATCCAATCCATTGCCTGCACCCTGAAGCCTGTGGAGGCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp CTTTTCTACTGGAGTGGGGTTAGAGTTCCTAAGTCCTGCCTGAACTaGGCCCTCAAGGGCCTCCACCCACTGCTCCCAGCATGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: LFYWSGVRVPKSCLN*ALKGLHPLLPAWPA
Trigger: AGCTGGCCATGCTGGGAGCAGTGGGTGGAGGCCCTTGAGGGCCAAGTTCAGGCAGGACTTAGGAACTCTAACCCCACTCCAGTAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS TCA 72 bp GCATGGGCCTGCGCCTGCATCTGGGCCAAGGCCTGCTaGGGAATCATTAACAACTGCCCATTCTCACTTCGG +
Preference number: 6 (lower is better)
Translates to: AWACACIWAKAC*GIINNCPFSLR
Trigger: CCGAAGTGAGAATGGGCAGTTGTTAATGATTCCTCAGCAGGCCTTGGCCCAGATGCAGGCGCAGGCCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS TCA 72 bp CTGGTTCCAAGTGTCCTCCTCATCTTACCTGCATGGTaGCCATCCAGGACGCTCTCCCTGAGCCCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: LVPSVLLILPAW*PSRTLSLSPLL
Trigger: AAGCAGCGGGCTCAGGGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGGACACTTGGAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS TCA 72 bp ACTTCCGGGAGGCCGAAGACAACGTGGCTGCCGAGCTaGTGTCTCCCAGCCTCTCTTCCAAACACAGTTCAG +
Preference number: 6 (lower is better)
Translates to: TSGRPKTTWLPS*CLPASLPNTVQ
Trigger: CTGAACTGTGTTTGGAAGAGAGGCTGGGAGACATCAGCTCGGCAGCCACGTTGTCTTCGGCCTCCCGGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp CCAATGCCTGGTTCCAAGTGTCCTCCTCATCTTACCTaGATGGTGACCATCCAGGACGCTCTCCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: PMPGSKCPPHLT*MVTIQDALPEP
Trigger: GGGCTCAGGGAGAGCGTCCTGGATGGTCACCATGCAGGTAAGATGAGGAGGACACTTGGAACCAGGCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474089.5
ENST00000628525.2
CDS GCA 72 bp CTGCACTGGACGAGGGCGCCTAGACTTCAAAATCACTaGAAGTCGGCGCAGAGTCAACACACGCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: LHWTRAPRLQNH*KSAQSQHTPEP
Trigger: AGGCTCAGGCGTGTGTTGACTCTGCGCCGACTTGCAGTGATTTTGAAGTCTAGGCGCCCTCGTCCAGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp AGCGCCGCACCACGAGATGAAGGGAGCGATGTCATCTaGTTCCCAGGGTGCGGTGAAAGTTACGGTCCATGT +
Preference number: 6 (lower is better)
Translates to: SAAPRDEGSDVI*FPGCGESYGPC
Trigger: ACATGGACCGTAACTTTCACCGCACCCTGGGAAGCAGATGACATCGCTCCCTTCATCTCGTGGTGCGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609045.1
CDS CCA 72 bp ATGTGGCCAGCAGACGGCACCAGGAAACCACAGATGTaGCAAATACCCCAAGGCCACCAGGGCAAAGGGACA +
Preference number: 6 (lower is better)
Translates to: MWPADGTRKPQM*QIPQGHQGKGT
Trigger: TGTCCCTTTGCCCTGGTGGCCTTGGGGTATTTGCCACATCTGTGGTTTCCTGGTGCCGTCTGCTGGCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS TCA 72 bp TCCTCTTTTTCCTGGGCCCGATCGCTGCTAGTGCTGTaGGGTTGGCGTCCCGCTGTCTCATTTGTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: SSFSWARSLLVL*GWRPAVSFVPV
Trigger: AACTGGCACAAATGAGACAGCGGGACGCCAACCTCACAGCACTAGCAGCGATCGGGCCCAGGAAAAAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000474089.5
ENST00000627770.2
ENST00000628040.1
ENST00000628525.2
CDS TCA 72 bp AAAGCCAGATCCAAACTGCACATAAGTGAACCGCTATaGGCAGCCGCGGCTTCGCCTCCCGGGACTCACCTA +
Preference number: 6 (lower is better)
Translates to: KARSKLHISEPL*AAAASPPGTHL
Trigger: TAGGTGAGTCCCGGGAGGCGAAGCCGCGGCTGCTCATAGCGGTTCACTTATGTGCAGTTTGGATCTGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp TTAGCATCACTTCCGGGAGGCCGAAGACAACGTGGCTaGCGAGCTGATGTCTCCCAGCCTCTCTTCCAAACA +
Preference number: 6 (lower is better)
Translates to: LASLPGGRRQRG*RADVSQPLFQT
Trigger: TGTTTGGAAGAGAGGCTGGGAGACATCAGCTCGGCAGCCACGTTGTCTTCGGCCTCCCGGAAGTGATGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp CCCACCTGTCCCACGCAGGTGCCCGTGTCTTACGCTTaGACCGCTGCTCCTAATCCAAGAGAACATCTATCT +
Preference number: 6 (lower is better)
Translates to: PTCPTQVPVSYA*TAAPNPREHLS
Trigger: AGATAGATGTTCTCTTGGATTAGGAGCAGCGGTCCAAGCGTAAGACACGGGCACCTGCGTGGGACAGGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 72 bp TGCACTGGGCTGCACCGTTGTCTGGGCCTGAGACACTaGCTTAATTATGGTAGTTGGGGTCACCTGCCGTGC +
Preference number: 6 (lower is better)
Translates to: CTGLHRCLGLRH*LNYGSWGHLPC
Trigger: GCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACAACGGTGCAGCCCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CAA 72 bp TTTTTCCTGGGCCCGATCGCTGCTAGTGCTGTGAGGTaGGCGTCCCGCTGTCTCATTTGTGCCAGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: FFLGPIAASAVR*ASRCLICASSC
Trigger: ACAGGAACTGGCACAAATGAGACAGCGGGACGCCAACCTCACAGCACTAGCAGCGATCGGGCCCAGGAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000474089.5
ENST00000627770.2
ENST00000628040.1
ENST00000628525.2
CDS CAA 90 bp CTGCAGGGTTGCACTGGGCTGCACCGTTGTCTGGGCCTGAGACACTaGCTTAATTATGGTAGTTGGGGTCACCTGCCGTGCAATGATAGG +
Preference number: 6 (lower is better)
Translates to: LQGCTGLHRCLGLRH*LNYGSWGHLPCNDR
Trigger: CCTATCATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACAACGGTGCAGCCCAGTGCAACCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CAA 90 bp ACTTTCCTCTTTTTCCTGGGCCCGATCGCTGCTAGTGCTGTGAGGTaGGCGTCCCGCTGTCTCATTTGTGCCAGTTCCTGTTGCTGCATC +
Preference number: 6 (lower is better)
Translates to: TFLFFLGPIAASAVR*ASRCLICASSCCCI
Trigger: GATGCAGCAACAGGAACTGGCACAAATGAGACAGCGGGACGCCAACCTCACAGCACTAGCAGCGATCGGGCCCAGGAAAAAGAGGAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000474089.5
ENST00000627770.2
ENST00000628040.1
ENST00000628525.2
CDS GCA 72 bp AGGCAGAAAAGAAGGAAAGGGGGAAGTTCTGGGTCCTaGAGGAAAGGGCCGGGAGAACTGGAGGACAACTTC +
Preference number: 6 (lower is better)
Translates to: RQKRRKGGSSGS*RKGPGELEDNF
Trigger: GAAGTTGTCCTCCAGTTCTCCCGGCCCTTTCCTGCAGGACCCAGAACTTCCCCCTTTCCTTCTTTTCTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CAA 72 bp AAATATGAGGTCCCTGAGGTTGACCCGCGTGATTCTTaGTCGCGTGAACTGTCTGGGGGTTCCGACACCCGA +
Preference number: 6 (lower is better)
Translates to: KYEVPEVDPRDS*SRELSGGSDTR
Trigger: TCGGGTGTCGGAACCCCCAGACAGTTCACGCGACAAAGAATCACGCGGGTCAACCTCAGGGACCTCATATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000608458.1
ENST00000626855.1
ENST00000627770.2
ENST00000628040.1
CDS CCA 72 bp AGGCTTCCTGCATGCTTGGAAAAGGTTTCTGAGCCGTaGCCAATTTATCTAAGAAGCGGGCGGGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: RLPACLEKVSEP*PIYLRSGREQR
Trigger: CCTCTGCTCCCGCCCGCTTCTTAGATAAATTGGCCACGGCTCAGAAACCTTTTCCAAGCATGCAGGAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp GCAAACATGTCTCCAACGAAACAGGAACACCCACACTaGACAGGAAGAGCCTCAGGCAGCTCAGGCAATGCT +
Preference number: 6 (lower is better)
Translates to: ANMSPTKQEHPH*TGRASGSSGNA
Trigger: AGCATTGCCTGAGCTGCCTGAGGCTCTTCCTGTCCAGTGTGGGTGTTCCTGTTTCGTTGGAGACATGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CCA 72 bp GCCCTGGCAGGTAAACTCTATGCTGCAGAACATGTGTaGGGACCTGGGGAAGCGGCCTATAATGCAAACATG +
Preference number: 6 (lower is better)
Translates to: ALAGKLYAAEHV*GPGEAAYNANM
Trigger: CATGTTTGCATTATAGGCCGCTTCCCCAGGTCCCCACACATGTTCTGCAGCATAGAGTTTACCTGCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp CCCAGGCAGGAGGGGTCCAGACTCCCTGTCTTTCCCATAGGGTCTTaGCTTGCAGAATTCTATGTGGATTTTGGCTCCCGCAGAGAGTTT +
Preference number: 6 (lower is better)
Translates to: PRQEGSRLPVFPIGS*LAEFYVDFGSRREF
Trigger: AAACTCTCTGCGGGAGCCAAAATCCACATAGAATTCTGCAAGCAAAGACCCTATGGGAAAGACAGGGAGTCTGGACCCCTCCTGCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS TCA 72 bp TTTGGCTCCCGCAGAGAGTTTGTTGCTAAACTGCTCTaGAGATGGAGTGGAGATCTCGTAGGAACCTCCCCC +
Preference number: 6 (lower is better)
Translates to: FGSRREFVAKLL*RWSGDLVGTSP
Trigger: GGGGGAGGTTCCTACGAGATCTCCACTCCATCTTCAGAGCAGTTTAGCAACAAACTCTCTGCGGGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp ACCAGTAACATCCCCAGACAAGGCAGGGCGGGGACGTaGCGGTGGTTCAAAGCCAACTCAACTATTTCATTT +
Preference number: 6 (lower is better)
Translates to: TSNIPRQGRAGT*RWFKANSTISF
Trigger: AAATGAAATAGTTGAGTTGGCTTTGAACCACCGGCACGTCCCCGCCCTGCCTTGTCTGGGGATGTTACTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 72 bp GAGGGGTCCAGACTCCCTGTCTTTCCCATAGGGTCTTaGCTTGCAGAATTCTATGTGGATTTTGGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: EGSRLPVFPIGS*LAEFYVDFGSR
Trigger: GCGGGAGCCAAAATCCACATAGAATTCTGCAAGCAAAGACCCTATGGGAAAGACAGGGAGTCTGGACCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp CACTTGCTTAATTATGGTAGTTGGGGTCACCTGCCGTaGAATGATAGGTGTTCCAGGTGCCTGTACGGTGGA +
Preference number: 6 (lower is better)
Translates to: HLLNYGSWGHLP*NDRCSRCLYGG
Trigger: TCCACCGTACAGGCACCTGGAACACCTATCATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000608887.1
CDS CCA 72 bp TGTCTGGGCCTGAGACACTTGCTTAATTATGGTAGTTaGGGTCACCTGCCGTGCAATGATAGGTGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: CLGLRHLLNYGS*GHLPCNDRCSR
Trigger: CCTGGAACACCTATCATTGCACGGCAGGTGACCCCAACTACCATAATTAAGCAAGTGTCTCAGGCCCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000252996.9
CDS CCA 72 bp CATTTACGGGGTGTCACACACACAAGGCCAGGTCACTaGCAGCACGTTTTGAAGAACAGCAGTAGTAGCGAA +
Preference number: 6 (lower is better)
Translates to: HLRGVTHTRPGH*QHVLKNSSSSE
Trigger: TTCGCTACTACTGCTGTTCTTCAAAACGTGCTGCCAGTGACCTGGCCTTGTGTGTGTGACACCCCGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CCA 72 bp TCCTTGTCAAAAGCCAATGCTCAAGTCCATAAGGCCTaGCCTCAAACCTCTGGGCCCAGGTGCTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: SLSKANAQVHKA*PQTSGPRCFRI
Trigger: AATTCTGAAGCACCTGGGCCCAGAGGTTTGAGGCCAGGCCTTATGGACTTGAGCATTGGCTTTTGACAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp TTACGGGGTGTCACACACACAAGGCCAGGTCACTGGCAGCACGTTTaGAAGAACAGCAGTAGTAGCGAAAAACACTCAGACACACAGCTT +
Preference number: 6 (lower is better)
Translates to: LRGVTHTRPGHWQHV*KNSSSSEKHSDTQL
Trigger: AAGCTGTGTGTCTGAGTGTTTTTCGCTACTACTGCTGTTCTTCAAAACGTGCTGCCAGTGACCTGGCCTTGTGTGTGTGACACCCCGTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS CAA 72 bp GTCACACACACAAGGCCAGGTCACTGGCAGCACGTTTaGAAGAACAGCAGTAGTAGCGAAAAACACTCAGAC +
Preference number: 6 (lower is better)
Translates to: VTHTRPGHWQHV*KNSSSSEKHSD
Trigger: GTCTGAGTGTTTTTCGCTACTACTGCTGTTCTTCAAAACGTGCTGCCAGTGACCTGGCCTTGTGTGTGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS TCA 72 bp TCACACACACAAGGCCAGGTCACTGGCAGCACGTTTTaGAGAACAGCAGTAGTAGCGAAAAACACTCAGACA +
Preference number: 6 (lower is better)
Translates to: SHTQGQVTGSTF*RTAVVAKNTQT
Trigger: TGTCTGAGTGTTTTTCGCTACTACTGCTGTTCTTCAAAACGTGCTGCCAGTGACCTGGCCTTGTGTGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1
CDS GCA 72 bp AATACCCAAGCTTCCTCTAGCAGGAGGCTTCCTGCATaGTTGGAAAAGGTTTCTGAGCCGTGGCCAATTTAT +
Preference number: 6 (lower is better)
Translates to: NTQASSSRRLPA*LEKVSEPWPIY
Trigger: ATAAATTGGCCACGGCTCAGAAACCTTTTCCAAGCATGCAGGAAGCCTCCTGCTAGAGGAAGCTTGGGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 72 bp CGTTCATTTTCTAAACAAAATATGAGGTCCCTGAGGTaGACCCGCGTGATTCTTTGTCGCGTGAACTGTCTG +
Preference number: 6 (lower is better)
Translates to: RSFSKQNMRSLR*TRVILCRVNCL
Trigger: CAGACAGTTCACGCGACAAAGAATCACGCGGGTCAACCTCAGGGACCTCATATTTTGTTTAGAAAATGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000608458.1
ENST00000626855.1
ENST00000627770.2
ENST00000628040.1
CDS CAA 72 bp CACATACCAGCTCATGATGAGGGAGCCCGCACCATTTaGTTGTTTAAGCTGTCTTTAGAGGAAGAAAACACC +
Preference number: 6 (lower is better)
Translates to: HIPAHDEGARTI*LFKLSLEEENT
Trigger: GGTGTTTTCTTCCTCTAAAGACAGCTTAAACAACAAAATGGTGCGGGCTCCCTCATCATGAGCTGGTATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS CAA 90 bp CCATCACAACACATACCAGCTCATGATGAGGGAGCCCGCACCATTTaGTTGTTTAAGCTGTCTTTAGAGGAAGAAAACACCTCTGAAATT +
Preference number: 6 (lower is better)
Translates to: PSQHIPAHDEGARTI*LFKLSLEEENTSEI
Trigger: AATTTCAGAGGTGTTTTCTTCCTCTAAAGACAGCTTAAACAACAAAATGGTGCGGGCTCCCTCATCATGAGCTGGTATGTGTTGTGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000609041.1
ENST00000625376.1
CDS GCA 72 bp ACGAGCTCTTTCACATTAGCTGCTGTCTCTGTAGACTaGTTGCCAGATGAAGCCAGTTTTATTAACGTAGAT +
Preference number: 6 (lower is better)
Translates to: TSSFTLAAVSVD*LPDEASFINVD
Trigger: ATCTACGTTAATAAAACTGGCTTCATCTGGCAAGCAGTCTACAGAGACAGCAGCTAATGTGAAAGAGCTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000486599.1
CDS GCA 72 bp GGGAATGTAAAGTCAAGGTTTCTCACCAGTAAATTCTaGACGAGCTCTTTCACATTAGCTGCTGTCTCTGTA +
Preference number: 6 (lower is better)
Translates to: GNVKSRFLTSKF*TSSFTLAAVSV
Trigger: TACAGAGACAGCAGCTAATGTGAAAGAGCTCGTGCAGAATTTACTGGTGAGAAACCTTGACTTTACATTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486599.1
CDS CAA 72 bp AGCTCTTTCACATTAGCTGCTGTCTCTGTAGACTGCTaGCCAGATGAAGCCAGTTTTATTAACGTAGATAGG +
Preference number: 6 (lower is better)
Translates to: SSFTLAAVSVDC*PDEASFINVDR
Trigger: CCTATCTACGTTAATAAAACTGGCTTCATCTGGCAAGCAGTCTACAGAGACAGCAGCTAATGTGAAAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000486599.1
CDS CAA 90 bp TTCTGCACGAGCTCTTTCACATTAGCTGCTGTCTCTGTAGACTGCTaGCCAGATGAAGCCAGTTTTATTAACGTAGATAGGAAATTTTTA +
Preference number: 6 (lower is better)
Translates to: FCTSSFTLAAVSVDC*PDEASFINVDRKFL
Trigger: TAAAAATTTCCTATCTACGTTAATAAAACTGGCTTCATCTGGCAAGCAGTCTACAGAGACAGCAGCTAATGTGAAAGAGCTCGTGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000252996.9
ENST00000486599.1
CDS CCA 72 bp ATATTTTCTCTACAAGATTCTGTAGCCTTTGTTGCGTaGCATGTGATACATAACTTACTACATCTGGATGTA +
Preference number: 6 (lower is better)
Translates to: IFSLQDSVAFVA*HVIHNLLHLDV
Trigger: TACATCCAGATGTAGTAAGTTATGTATCACATGCCACGCAACAAAGGCTACAGAATCTTGTAGAGAAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000252996.9
ENST00000436129.2
ENST00000627770.2
ENST00000628040.1
CDS TCA 72 bp TACAGGAAAATCTGCTTAAGTGTGCACTTAAGGATATaGAAATCATCACCTCAAATCAGAACCTCAAAAACT +
Preference number: 6 (lower is better)
Translates to: YRKICLSVHLRI*KSSPQIRTSKT
Trigger: AGTTTTTGAGGTTCTGATTTGAGGTGATGATTTTCATATCCTTAAGTGCACACTTAAGCAGATTTTCCTGTA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000608458.1
ENST00000626855.1