Pregenerated sensors for TAF1D (Homo sapiens)
Ensembl gene IDs: ENSG00000166012Ensembl transcript IDs: ENST00000323981.6, ENST00000393259.6, ENST00000448108.7, ENST00000526015.5, ENST00000527068.1, ENST00000527169.5, ENST00000527690.1, ENST00000528734.1, ENST00000529435.5, ENST00000529508.1, ENST00000529794.5, ENST00000530089.6, ENST00000530769.5, ENST00000532235.1, ENST00000532455.1, ENST00000533794.5, ENST00000534770.1, ENST00000546088.5
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTGAGATGAGTGTACAGTaGGTGAACATGAATGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RARAKEFHKVSITEGEGLEMSVQ*VNMNES Trigger: GGACTCATTCATGTTCACTCACTGTACACTCATCTC...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTTTCTGGTCTTCCCCGTaGTCTTCCTGTTGGCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCFWSSP*SSCWLV Trigger: TACCAGCCAACAGGAAGACCACGGGGAAGACCAGAA...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTGTGAGTGAACATGAATaGGTCCCTAGAACGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFVSEHE*VPRTSL Trigger: CAGGCTCGTTCTAGGGACTCATTCATGTTCACTCAC...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTCTCATAAGCCCTCTTTaGAATGACCCATACAAATGT | + |
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Preference number: 2 (lower is better) Translates to: RARAKEFHKVSITEGEGLLISPL*NDPYKC Trigger: ACATTTGTATGGGTCATTTCAAAGAGGGCTTATGAG...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTAAGCCCTCTTTGAAATaGCCCATACAAATGTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: RARAKEFHKVSITEGEGLKPSLK*PIQMSF Trigger: AAAAGACATTTGTATGGGTCATTTCAAAGAGGGCTT...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTTCCCTAGAACGAGCCTaGGTTAACTCTACTACAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFSLERA*VNSTTN Trigger: GTTTGTAGTAGAGTTAACTCAGGCTCGTTCTAGGGA...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR-3UTR TCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTCCCTCTCAACATGAATaGGTTCAAATCACATTCATT | + |
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Preference number: 2 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFPSQHE*VQITFI Trigger: AATGAATGTGATTTGAACTCATTCATGTTGAGAGGG...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| 3UTR GCA 72 bp | CTGAGGCAGAATCGCTTGAACCCGGGAGATGGAGGTTaGAGTAAGCCAAGACTGCGGCCATTGCACTACAGC | + |
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Preference number: 3 (lower is better) Translates to: LRQNRLNPGDGG*SKPRLRPLHYS Trigger: GCTGTAGTGCAATGGCCGCAGTCTTGGCTTACTGCAACCTCCATCTCCCGGGTTCAAGCGATTCTGCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| 3UTR-3UTR CAA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTCCCGTGGTCTTCCTGTaGGCTGGTACCTCCTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCPVVFL*AGTSSF Trigger: AAAAGAGGAGGTACCAGCCAACAGGAAGACCACGGG...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| 3UTR CCA 72 bp | GCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTaGGATAAAATTACAGCATTTCAAATCCCCTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: ASDRSLVMAEQS*DKITAFQIPSS Trigger: TGAAGAGGGGATTTGAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCCAAAAGATGAGTCACTaGATGAATCACTTGCGTGAA | + |
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Preference number: 3 (lower is better) Translates to: FFLSISEYIGFLLPSGLPQKMSH*MNHLRE Trigger: TTCACGCAAGTGATTCATCAAGTGACTCATCTTTTG...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534770.1 |
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| 3UTR TCA 72 bp | TTCAACATATCCACACAGGTTTACGTGACTTTAGGATaGAATATGTGTAACTGCCAGTTGAATAATGATGCA | + |
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Preference number: 3 (lower is better) Translates to: FNISTQVYVTLG*NMCNCQLNNDA Trigger: TGCATCATTATTCAACTGGCAGTTACACATATTTCATCCTAAAGTCACGTAAACCTGTGTGGATATGTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533794.5 |
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| CDS-3UTR CCA 90 bp | CTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCATTTCAAAACGGCCTCGCAGTaGCCCCAACCGCGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LTGHLSWLNKAGIKLQHFKTASQ*PQPRTC Trigger: GCAAGTGCGCGGTTGGGGCCACTGCGAGGCCGTTTT...GAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR GCA 90 bp | TACAATACTAAGCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATACAAGACTGCGGCCATTaGACTACAGCCTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: YNTKHLTGHLSWLNKAGIQDCGH*TTAWVT Trigger: TGTCACCCAGGCTGTAGTGCAATGGCCGCAGTCTTG...TATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGCTTAGTATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTAAAACGGCCTCGCAGTaGCCCCAACCGCGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFKTASQ*PQPRTC Trigger: GCAAGTGCGCGGTTGGGGCCACTGCGAGGCCGTTTT...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTAAAACGGCCTCGCAGTaGCCCCAACCGCGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCKTASQ*PQPRTC Trigger: GCAAGTGCGCGGTTGGGGCCACTGCGAGGCCGTTTT...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTTTCTGGTCTTCCCCGTaGTCTTCCTGTTGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLFWSSP*SSCWLV Trigger: TACCAGCCAACAGGAAGACCACGGGGAAGACCAGAA...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | TTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTATAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FWVSEFLHHQTGTYIHIYNPRLA*CPRALY Trigger: GTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTT...ATAAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: FFLSISEYIGFLLPSGLPNPRLA*CPRALY Trigger: GTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTT...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTCCCAAAACCCGCGACTaGCCTGGTGTCCTAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFPKTRD*PGVLEL Trigger: GAGCTCTAGGACACCAGGCCAGTCGCGGGTTTTGGG...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTCCGTGGTCTTCCTGTTaGCTGGTACCTCCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLPWSSC*LVPPLF Trigger: AAAAAGAGGAGGTACCAGCCAACAGGAAGACCACGG...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFNPRLA*CPRALY Trigger: GTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTT...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCNPRLA*CPRALY Trigger: GTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTT...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTTTCTGGTCTTCCCCGTaGTCTTCCTGTTGGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SSGFQNFFTTRLVHISTFFWSSP*SSCWLV Trigger: TACCAGCCAACAGGAAGACCACGGGGAAGACCAGAA...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTTTTCTCCCCTTTAGGTaGGTAAGGGATACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLFLPFR*VRDTLS Trigger: ACTCAGTGTATCCCTTACTCACCTAAAGGGGAGAAA...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR TCA 90 bp | TACAATACTAAGCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAGATGAATCACTTGCGTaGACACTTTCAGGTGTACGA | + |
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Preference number: 4 (lower is better) Translates to: YNTKHLTGHLSWLNKAGIDESLA*TLSGVR Trigger: TCGTACACCTGAAAGTGTTCACGCAAGTGATTCATC...TATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGCTTAGTATTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTTCCCTAGAACGAGCCTaGGTTAACTCTACTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLSLERA*VNSTTN Trigger: GTTTGTAGTAGAGTTAACTCAGGCTCGTTCTAGGGA...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTCCGTGGTCTTCCTGTTaGCTGGTACCTCCTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SSGFQNFFTTRLVHISTFPWSSC*LVPPLF Trigger: AAAAAGAGGAGGTACCAGCCAACAGGAAGACCACGG...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCTTCTGGTCTTCCCCGTaGTCTTCCTGTTGGCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: FFLSISEYIGFLLPSGLPFWSSP*SSCWLV Trigger: TACCAGCCAACAGGAAGACCACGGGGAAGACCAGAA...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | TTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTACTTTAAGATTTCTCCTTCCTTCTaGTCTTCCCCGTGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LQHFKSPLQDGWVSSYFKISPSF*SSPWSS Trigger: GGAAGACCACGGGGAAGACCAGAAGGAAGGAGAAAT...CTTAAAGTAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTCATTGCACTACAGCCTaGGTGACAGATCGAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: SSGFQNFFTTRLVHISTFHCTTA*VTDRDS Trigger: AGAGTCTCGATCTGTCACCCAGGCTGTAGTGCAATG...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | AAAGCTGGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGACAATACTAAGCATCTaGCAGGTCACTTGTCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KAGIKLQHFKSPLQDGWVTILSI*QVTCHG Trigger: GCCATGACAAGTGACCTGTCAGATGCTTAGTATTGT...CACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCCCGTGGTCTTCCTGTTaGCTGGTACCTCCTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: FFLSISEYIGFLLPSGLPPWSSC*LVPPLF Trigger: AAAAAGAGGAGGTACCAGCCAACAGGAAGACCACGG...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCATTTCTCCTTCCTTCTaGTCTTCCCCGTGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FFLSISEYIGFLLPSGLPISPSF*SSPWSS Trigger: GGAAGACCACGGGGAAGACCAGAAGGAAGGAGAAAT...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | AAAGCTGGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGACAGGTCACTTGTCATaGCTGAACAAAGCTGGGATA | + |
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Preference number: 4 (lower is better) Translates to: KAGIKLQHFKSPLQDGWVTGHLS*LNKAGI Trigger: TATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGT...CACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCCAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR GCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTGTTATCACTTCGATTTaGAAGTTCCACAGCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLVITSI*KFHSIR Trigger: TCTGATGCTGTGGAACTTGCAAATCGAAGTGATAAC...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR GCA 90 bp | AGCTGGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCGTTATCACTTCGATTTaGAAGTTCCACAGCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SWDKITAFQIPSSRWLGVVITSI*KFHSIR Trigger: TCTGATGCTGTGGAACTTGCAAATCGAAGTGATAAC...GACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCCAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR GCA 90 bp | GGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCATTTCAAATCCATCTTCAAGATGTGTTaGATCCTCATCCTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GHLSWLNKAGIKLQHFKSIFKMC*ILILCC Trigger: ACAGCAGAGGATGAGGATGCAACACATCTTGAAGAT...GGATTTGAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTGCATCAGATGTCACATaGTCAAGAGAATCTATTCCT | + |
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Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLASDVT*SRESIP Trigger: AGGAATAGATTCTCTTGACCATGTGACATCTGATGC...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | AAGCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGGCATCAGATGTCACATaGTCAAGAGAATCTATTCCT | + |
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Preference number: 4 (lower is better) Translates to: KHLTGHLSWLNKAGIKLQASDVT*SRESIP Trigger: AGGAATAGATTCTCTTGACCATGTGACATCTGATGC...CTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTCCGTGGTCTTCCTGTTaGCTGGTACCTCCTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCPWSSC*LVPPLF Trigger: AAAAAGAGGAGGTACCAGCCAACAGGAAGACCACGG...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTATTTCTCCTTCCTTCTaGTCTTCCCCGTGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFISPSF*SSPWSS Trigger: GGAAGACCACGGGGAAGACCAGAAGGAAGGAGAAAT...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTATTTCTCCTTCCTTCTaGTCTTCCCCGTGGTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCISPSF*SSPWSS Trigger: GGAAGACCACGGGGAAGACCAGAAGGAAGGAGAAAT...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR TCA 90 bp | GATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTATTTCTCCCCTTTAGGTaGGTAAGGGATACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: DKITAFQIPSSRWLGVKLFLPFR*VRDTLS Trigger: ACTCAGTGTATCCCTTACTCACCTAAAGGGGAGAAA...TAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCTTTCTCCCCTTTAGGTaGGTAAGGGATACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: FFLSISEYIGFLLPSGLPFLPFR*VRDTLS Trigger: ACTCAGTGTATCCCTTACTCACCTAAAGGGGAGAAA...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532455.1 |
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| CDS-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTTATCCCCTGCCAATTTaGTATCACATTCGTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLYPLPI*YHIRYL Trigger: AAGATAACGAATGTGATATCAAATTGGCAGGGGATA...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR TCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTATTCAGAACTTACTATaGAACTATCCCCTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLIQNLL*NYPLPI Trigger: AATTGGCAGGGGATAGTTTCATAGTAAGTTCTGAAT...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR TCA 90 bp | TACAATACTAAGCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAATTCAGAACTTACTATaGAACTATCCCCTGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: YNTKHLTGHLSWLNKAGIIQNLL*NYPLPI Trigger: AATTGGCAGGGGATAGTTTCATAGTAAGTTCTGAAT...TATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGCTTAGTATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTGATGAATCACTTGCGTaGACACTTTCAGGTGTACGA | + |
|
Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFDESLA*TLSGVR Trigger: TCGTACACCTGAAAGTGTTCACGCAAGTGATTCATC...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR GCA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTTATGAAACTATCCCCTaGCAATTTGATATCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RARAKEFHKVSITEGEGLYETIP*QFDITF Trigger: GAATGTGATATCAAATTGGCAGGGGATAGTTTCATA...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTTTCTCCCCTTCGATTTaGAAGTTCCACAGCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCFSPSI*KFHSIR Trigger: TCTGATGCTGTGGAACTTGCAAATCGAAGGGGAGAA...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000534770.1 |
||
| CDS-3UTR CCA 90 bp | GGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCATTTCAAATCCTCTTCACCACCAGACTaGTACATATATCCACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GHLSWLNKAGIKLQHFKSSSPPD*YIYPHL Trigger: TAAATGTGGATATATGTACCAGTCTGGTGGTGAAGA...GGATTTGAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CCA 90 bp | GATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTAATCCCCTCTTCAAGATaGTTGGGTGTCAAGTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: DKITAFQIPSSRWLGVKLIPSSR*LGVKLL Trigger: AAGTAACTTGACACCCAACCATCTTGAAGAGGGGAT...TAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000448108.7 |
||
| CDS-3UTR CCA 90 bp | CTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCATTTCATGGCTGAACAAAGCTaGGATAAAATTACAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTGHLSWLNKAGIKLQHFMAEQS*DKITAF Trigger: AAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCAT...GAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR GCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTATCTTCAAGATGTGTTaGATCCTCATCCTCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFIFKMC*ILILCC Trigger: ACAGCAGAGGATGAGGATGCAACACATCTTGAAGAT...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR CCA 90 bp | GATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTACCTCTTCAAGATGGTTaGGTGTCAAGTTACTTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKITAFQIPSSRWLGVKLPLQDG*VSSYFK Trigger: CTTAAAGTAACTTGACACCCAACCATCTTGAAGAGG...TAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
||
| CDS-3UTR TCA 90 bp | GATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTATATCCCCTGCCAATTTaGTATCACATTCGTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DKITAFQIPSSRWLGVKLYPLPI*YHIRYL Trigger: AAGATAACGAATGTGATATCAAATTGGCAGGGGATA...TAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR TCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTCTCATAAGCCCTCTTTaGAATGACCCATACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFLISPL*NDPYKC Trigger: ACATTTGTATGGGTCATTTCAAAGAGGGCTTATGAG...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTATTGATTCAACATATCCACACAGGTTTACGTGACTTTAGGATGAAATATTACGTGACTTTAGGATaGAATATGTGTAACTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLIQHIHTGLRDFRMKYYVTLG*NMCNCQ Trigger: CTGGCAGTTACACATATTTCATCCTAAAGTCACGTA...ATATTTCATCCTAAAGTCACGTAAACCTGTGTGGATATGTTGAATCAATAGGGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533794.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTGCATCAGATGTCACATaGTCAAGAGAATCTATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCASDVT*SRESIP Trigger: AGGAATAGATTCTCTTGACCATGTGACATCTGATGC...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534770.1 |
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| CDS-3UTR TCA 90 bp | TCCCTATTGATTCAACATATCCACACAGGTTTACGTGACTTTAGGATGAAATATTGTGTAACTGCCAGTTaGATAATGATGCAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLLIQHIHTGLRDFRMKYCVTAS*IMMQRT Trigger: TGTTCTTTGCATCATTATTCAACTGGCAGTTACACA...ATATTTCATCCTAAAGTCACGTAAACCTGTGTGGATATGTTGAATCAATAGGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533794.5 |
||
| CDS-3UTR GCA 90 bp | GATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTATCACCAACATTCATTTaGTTCAATGATTCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKITAFQIPSSRWLGVKLSPTFI*FNDSFR Trigger: CCTGAAAGAATCATTGAAGCAAATGAATGTTGGTGA...TAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
||
| CDS-3UTR GCA 90 bp | TTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTATTATGAAACTATCCCCTaGCAATTTGATATCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FWVSEFLHHQTGTYIHIYYETIP*QFDITF Trigger: GAATGTGATATCAAATTGGCAGGGGATAGTTTCATA...ATAAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR GCA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTTCACCAACATTCATTTaGTTCAATGATTCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFSPTFI*FNDSFR Trigger: CCTGAAAGAATCATTGAAGCAAATGAATGTTGGTGA...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTTCACCAACATTCATTTaGTTCAATGATTCTTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCSPTFI*FNDSFR Trigger: CCTGAAAGAATCATTGAAGCAAATGAATGTTGGTGA...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000534770.1 |
||
| CDS CCA 90 bp | TTGCTGCTTGTAACCCAGGCCTCGGCCCAAAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTACACACCACCCTCCCGACCTCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLLVTQASAQNPRLA*CPRALYTPPSRPQP Trigger: GGGCTGAGGTCGGGAGGGTGGTGTGTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTTTTGGGCCGAGGCCTGGGTTACAAGCAGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000323981.6 ENST00000448108.7 ENST00000526015.5 ENST00000527169.5 ENST00000529508.1 ENST00000532235.1 ENST00000532455.1 ENST00000534770.1 |
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| CDS CCA 90 bp | CAGCGTCCCGAGGAGGGAGCTTGCGGTGCGTTCTGGGAAAGTTGCTaGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPEEGACGAFWESC*ASSFVSSLSVAFGF Trigger: GAAACCGAACGCAACGCTCAGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS GCA 90 bp | CTAAGGAGGCTGAGGCAGAATCGCTTGAACCCGGGAGATGGAGGTTaGAGTAAGCCAAGACTGCGGCCATTGCACTACAGCCTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LRRLRQNRLNPGDGG*SKPRLRPLHYSLGD Trigger: GTCACCCAGGCTGTAGTGCAATGGCCGCAGTCTTGGCTTACTGCAACCTCCATCTCCCGGGTTCAAGCGATTCTGCCTCAGCCTCCTTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000530089.6 ENST00000530769.5 ENST00000546088.5 |
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| CDS GCA 90 bp | GAGGCTCAATGCAAAATGAAAATGCAGCGTCCCGAGGAGGGAGCTTaGGGTGCGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EAQCKMKMQRPEEGA*GAFWESCWASSFVS Trigger: GGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATTTTGCATTGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 90 bp | CTGCATTTGATCCACAGGGTCTGGGCAATGACGAAGCTCCAGGACTaGTATGGCATGTCCCTCACTGCCGTATTCAGCAGCAAGCCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHLIHRVWAMTKLQD*YGMSLTAVFSSKPS Trigger: GCTAGGCTTGCTGCTGAATACGGCAGTGAGGGACATGCCATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTGTGGATCAAATGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 90 bp | AAAATGAAAATGCAGCGTCCCGAGGAGGGAGCTTGCGGTGCGTTCTaGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KMKMQRPEEGACGAF*ESCWASSFVSSLSV Trigger: AACGCTCAGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 90 bp | AAGTCCGATCCTTTAGGCAGCCCACTGCATTTGATCCACAGGGTCTaGGCAATGACGAAGCTCCAGGACTGGTATGGCATGTCCCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: KSDPLGSPLHLIHRV*AMTKLQDWYGMSLT Trigger: AGTGAGGGACATGCCATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTGTGGATCAAATGCAGTGGGCTGCCTAAAGGATCGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS GCA 90 bp | TCAATGCAAAATGAAAATGCAGCGTCCCGAGGAGGGAGCTTGCGGTaGGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SMQNENAASRGGSLR*VLGKLLGQLLCFQS Trigger: AGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATTTTGCATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS GCA 90 bp | GCCGTATTCAGCAGCAAGCCTAGCTGTGTAATTTGTGAGGCTCAATaGAAAATGAAAATGCAGCGTCCCGAGGAGGGAGCTTGCGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: AVFSSKPSCVICEAQ*KMKMQRPEEGACGA Trigger: CGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATTTTGCATTGAGCCTCACAAATTACACAGCTAGGCTTGCTGCTGAATACGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTGCCCCAACCGCGCACTaGCTGCTTGTAACCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RARAKEFHKVSITEGEGLAPTAH*LLVTQA Trigger: GGCCTGGGTTACAAGCAGCAAGTGCGCGGTTGGGGC...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | GGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTGCCCCAACCGCGCACTaGCTGCTTGTAACCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GIKLQHFKSPLQDGWVSSAPTAH*LLVTQA Trigger: GGCCTGGGTTACAAGCAGCAAGTGCGCGGTTGGGGC...ACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCGCCCCAACCGCGCACTaGCTGCTTGTAACCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFLSISEYIGFLLPSGLPAPTAH*LLVTQA Trigger: GGCCTGGGTTACAAGCAGCAAGTGCGCGGTTGGGGC...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CAA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTCCCGTGGTCTTCCTGTaGGCTGGTACCTCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RARAKEFHKVSITEGEGLPVVFL*AGTSSF Trigger: AAAAGAGGAGGTACCAGCCAACAGGAAGACCACGGG...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTCCAAGACTGCGGCCATaGCACTACAGCCTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGFQNFFTTRLVHISTFPRLRP*HYSLGD Trigger: GTCACCCAGGCTGTAGTGCAATGGCCGCAGTCTTGG...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | TTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTACTTTAAGCCCGTGGTCTTCCTGTaGGCTGGTACCTCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LQHFKSPLQDGWVSSYFKPVVFL*AGTSSF Trigger: AAAAGAGGAGGTACCAGCCAACAGGAAGACCACGGG...CTTAAAGTAACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCCCCGTGGTCTTCCTGTaGGCTGGTACCTCCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFLSISEYIGFLLPSGLPPVVFL*AGTSSF Trigger: AAAAGAGGAGGTACCAGCCAACAGGAAGACCACGGG...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTCACTTGATGAATCACTaGCGTGAACACTTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RARAKEFHKVSITEGEGLHLMNH*REHFQV Trigger: CACCTGAAAGTGTTCACGCAAGTGATTCATCAAGTG...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | AAGCATCTGACAGGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCACTTGATGAATCACTaGCGTGAACACTTTCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KHLTGHLSWLNKAGIKLQHLMNH*REHFQV Trigger: CACCTGAAAGTGTTCACGCAAGTGATTCATCAAGTG...CTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGCATCTGACAGGTCACTaGTCATGGCTGAACAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAGIKLQHFKSPLQDGWVHLTGH*SWLNKA Trigger: AGCTTTGTTCAGCCATGACAAGTGACCTGTCAGATG...CACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCCAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | GGGATAAAATTACAGCATTTCAAATCCCCTCTTCAAGATGGTTGGGTGTCAAGTTATCTTCAAGATGTGTaGCATCCTCATCCTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIKLQHFKSPLQDGWVSSYLQDV*HPHPLL Trigger: CAGCAGAGGATGAGGATGCAACACATCTTGAAGATA...ACTTGACACCCAACCATCTTGAAGAGGGGATTTGAAATGCTGTAATTTTATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS CCA 90 bp | TCCACTCACCTTCGATTTGCAAGTTCCACAGCATCAGATGTCACATaGTCAAGAGAATCTATTCCTGATTTATCCATCAATTGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: STHLRFASSTASDVT*SRESIPDLSINCSL Trigger: CAAAGAGCAATTGATGGATAAATCAGGAATAGATTCTCTTGACCATGTGACATCTGATGCTGTGGAACTTGCAAATCGAAGGTGAGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529508.1 |
||
| CDS-3UTR CAA 90 bp | GGTCACTTGTCATGGCTGAACAAAGCTGGGATAAAATTACAGCATTTCAAATCCAGTTATCACTTCGATTaGCAAGTTCCACAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHLSWLNKAGIKLQHFKSSYHFD*QVPQHQ Trigger: CTGATGCTGTGGAACTTGCAAATCGAAGTGATAACT...GGATTTGAAATGCTGTAATTTTATCCCAGCTTTGTTCAGCCATGACAAGTGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
||
| CDS-3UTR CAA 90 bp | AGAGCAAGGGCAAAAGAATTCCATAAGGTGAGTATAACTGAGGGAGAAGGACTTCTATCCCCTGCCAATTaGATATCACATTCGTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: RARAKEFHKVSITEGEGLLSPAN*ISHSLS Trigger: AGATAACGAATGTGATATCAAATTGGCAGGGGATAG...AAGTCCTTCTCCCTCAGTTATACTCACCTTATGGAATTCTTTTGCCCTTGCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCTTTCTCCCCTTCGATTaGCAAGTTCCACAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFLSISEYIGFLLPSGLPFLPFD*QVPQHQ Trigger: CTGATGCTGTGGAACTTGCAAATCGAAGGGGAGAAA...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534770.1 |
||
| CDS CCA 90 bp | TTTTCTCCCCTTCGATTTGCAAGTTCCACAGCATCAGATGTCACATaGTCAAGAGAATCTATTCCTGATTTATCCATCAATTGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPLRFASSTASDVT*SRESIPDLSINCSL Trigger: CAAAGAGCAATTGATGGATAAATCAGGAATAGATTCTCTTGACCATGTGACATCTGATGCTGTGGAACTTGCAAATCGAAGGGGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534770.1 |
||
| CDS CCA 90 bp | AACAGCTTGCTTCGATTTGCAAGTTCCACAGCATCAGATGTCACATaGTCAAGAGAATCTATTCCTGATTTATCCATCAATTGCTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSLLRFASSTASDVT*SRESIPDLSINCSL Trigger: CAAAGAGCAATTGATGGATAAATCAGGAATAGATTCTCTTGACCATGTGACATCTGATGCTGTGGAACTTGCAAATCGAAGCAAGCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532235.1 |
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| CDS-3UTR CAA 90 bp | TTCTTCTTATCTATTAGTGAGTATATAGGATTTCTCCTTCCTTCTGGTCTTCCCCACTTGATGAATCACTaGCGTGAACACTTTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FFLSISEYIGFLLPSGLPHLMNH*REHFQV Trigger: CACCTGAAAGTGTTCACGCAAGTGATTCATCAAGTG...GGGAAGACCAGAAGGAAGGAGAAATCCTATATACTCACTAATAGATAAGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS CCA 90 bp | GAGTTATCACTTCGATTTGCAAGTTCCACAGCATCAGATGTCACATaGTCAAGAGAATCTATTCCTGATTTATCCATCAATTGCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ELSLRFASSTASDVT*SRESIPDLSINCSL Trigger: CAAAGAGCAATTGATGGATAAATCAGGAATAGATTCTCTTGACCATGTGACATCTGATGCTGTGGAACTTGCAAATCGAAGTGATAACTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000323981.6 ENST00000448108.7 ENST00000526015.5 ENST00000527169.5 |
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| CDS CCA 90 bp | GCAATACTAGTCAAAGGAAACACAAAATTTGAGAATTTTGTGTTCTaGAGAATTCTAGATGAACGGTGTGCCAAGCTTGGCTCAACTGTA | + |
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Preference number: 5 (lower is better) Translates to: AILVKGNTKFENFVF*RILDERCAKLGSTV Trigger: TACAGTTGAGCCAAGCTTGGCACACCGTTCATCTAGAATTCTCCAGAACACAAAATTCTCAAATTTTGTGTTTCCTTTGACTAGTATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527068.1 ENST00000528734.1 |
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| CDS-3UTR CAA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTCACTTGATGAATCACTaGCGTGAACACTTTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCHLMNH*REHFQV Trigger: CACCTGAAAGTGTTCACGCAAGTGATTCATCAAGTG...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS-3UTR CAA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTCAAAAGATGAGTCACTaGATGAATCACTTGCGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSGFQNFFTTRLVHISTFQKMSH*MNHLRE Trigger: TTCACGCAAGTGATTCATCAAGTGACTCATCTTTTG...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTTATCTTCAAGATGTGTaGCATCCTCATCCTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFYLQDV*HPHPLL Trigger: CAGCAGAGGATGAGGATGCAACACATCTTGAAGATA...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | AGTTCTGGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTCTATCCCCTGCCAATTaGATATCACATTCGTTATCT | + |
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Preference number: 5 (lower is better) Translates to: SSGFQNFFTTRLVHISTFLSPAN*ISHSLS Trigger: AGATAACGAATGTGATATCAAATTGGCAGGGGATAG...AAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCCAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS-3UTR CAA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTAGTTATCACTTCGATTaGCAAGTTCCACAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFSYHFD*QVPQHQ Trigger: CTGATGCTGTGGAACTTGCAAATCGAAGTGATAACT...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | GGGTTTCAGAATTTCTTCACCACCAGACTGGTACATATATCCACATTTATCTTTCTATATGCTTCACCTTaGACATTCATGATCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFQNFFTTRLVHISTFIFLYASP*TFMILS Trigger: TGACAGGATCATGAATGTCAAAGGTGAAGCATATAG...AAAGATAAATGTGGATATATGTACCAGTCTGGTGGTGAAGAAATTCTGAAACCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448108.7 |
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| CDS GCA 90 bp | ATCCCCTGCCAATTTGATATCACATTCGTTATCTTCAAGATGTGTTaGATCCTCATCCTCTGCTCTGTAATATTAAAATTTATCATCGAG | + |
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Preference number: 5 (lower is better) Translates to: IPCQFDITFVIFKMC*ILILCSVILKFIIE Trigger: CTCGATGATAAATTTTAATATTACAGAGCAGAGGATGAGGATGCAACACATCTTGAAGATAACGAATGTGATATCAAATTGGCAGGGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527068.1 ENST00000528734.1 |
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| CDS GCA 90 bp | TGCAGTGCAATTATGACTGAACTGTACAACTCGTATTCCCAAATTTaGAATATTGCTGAGAAATGCTTTCACAAACCTCTCAAATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: CSAIMTELYNSYSQI*NIAEKCFHKPLKFL Trigger: AAGGAATTTGAGAGGTTTGTGAAAGCATTTCTCAGCAATATTGCAAATTTGGGAATACGAGTTGTACAGTTCAGTCATAATTGCACTGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530769.5 |
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| CDS-3UTR CAA 90 bp | GCCCTCTTTGAAATGACCCATACAAATGTCTTTTCTAATGCATACATACCTTTTCAAAAGATGAGTCACTaGATGAATCACTTGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ALFEMTHTNVFSNAYIPFQKMSH*MNHLRE Trigger: TTCACGCAAGTGATTCATCAAGTGACTCATCTTTTG...AAAAGGTATGTATGCATTAGAAAAGACATTTGTATGGGTCATTTCAAAGAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000323981.6 |
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| CDS-3UTR CAA 90 bp | TTTTCATTCTCTGATTCTAAAAATGGGAAGCCAGATCCTCTGCTTCTAAATTGTCAAAAGATGAGTCACTaGATGAATCACTTGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSFSDSKNGKPDPLLLNCQKMSH*MNHLRE Trigger: TTCACGCAAGTGATTCATCAAGTGACTCATCTTTTG...ACAATTTAGAAGCAGAGGATCTGGCTTCCCATTTTTAGAATCAGAGAATGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000532455.1 ENST00000534770.1 |
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| CDS GCA 90 bp | GATATCACATTCGTTATCTTCAAGATGTGTTGCATCCTCATCCTCTaGTCTGTAATATTAAAATTTATCATCGAGATGACAGAATCTTCG | + |
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Preference number: 5 (lower is better) Translates to: DITFVIFKMCCILIL*SVILKFIIEMTESS Trigger: CGAAGATTCTGTCATCTCGATGATAAATTTTAATATTACAGAGCAGAGGATGAGGATGCAACACATCTTGAAGATAACGAATGTGATATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000527068.1 ENST00000528734.1 ENST00000529794.5 |
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| CDS CCA 72 bp | GTAACCCAGGCCTCGGCCCAAAACCCGCGACTGGCCTaGTGTCCTAGAGCTCTGTACACACCACCCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VTQASAQNPRLA*CPRALYTPPSR Trigger: TCGGGAGGGTGGTGTGTACAGAGCTCTAGGACACCAGGCCAGTCGCGGGTTTTGGGCCGAGGCCTGGGTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000323981.6 ENST00000448108.7 ENST00000526015.5 ENST00000527169.5 ENST00000529508.1 ENST00000532235.1 ENST00000532455.1 ENST00000534770.1 |
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| CDS CAA 90 bp | AATGCAGCGTCCCGAGGAGGGAGCTTGCGGTGCGTTCTGGGAAAGTaGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: NAASRGGSLRCVLGK*LGQLLCFQSERCVR Trigger: CCGAACGCAACGCTCAGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 72 bp | GAGGAGGGAGCTTGCGGTGCGTTCTGGGAAAGTTGCTaGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: EEGACGAFWESC*ASSFVSSLSVA Trigger: CGCAACGCTCAGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 72 bp | ATGCAGCGTCCCGAGGAGGGAGCTTGCGGTGCGTTCTaGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: MQRPEEGACGAF*ESCWASSFVSS Trigger: ACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CAA 72 bp | TCCCGAGGAGGGAGCTTGCGGTGCGTTCTGGGAAAGTaGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGT | + |
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Preference number: 6 (lower is better) Translates to: SRGGSLRCVLGK*LGQLLCFQSER Trigger: ACGCTCAGACTGGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 72 bp | CAGGGTCTGGGCAATGACGAAGCTCCAGGACTGGTATaGCATGTCCCTCACTGCCGTATTCAGCAGCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QGLGNDEAPGLV*HVPHCRIQQQA Trigger: GGCTTGCTGCTGAATACGGCAGTGAGGGACATGCCATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS GCA 72 bp | AATGAAAATGCAGCGTCCCGAGGAGGGAGCTTGCGGTaGGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: NENAASRGGSLR*VLGKLLGQLLC Trigger: ACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 72 bp | ATCCACAGGGTCTGGGCAATGACGAAGCTCCAGGACTaGTATGGCATGTCCCTCACTGCCGTATTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IHRVWAMTKLQD*YGMSLTAVFSS Trigger: GCTGCTGAATACGGCAGTGAGGGACATGCCATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CAA 72 bp | ATGCAAAATGAAAATGCAGCGTCCCGAGGAGGGAGCTaGCGGTGCGTTCTGGGAAAGTTGCTGGGCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: MQNENAASRGGS*RCVLGKLLGQL Trigger: GAGCTGGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGGGACGCTGCATTTTCATTTTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CCA 72 bp | CCTTTAGGCAGCCCACTGCATTTGATCCACAGGGTCTaGGCAATGACGAAGCTCCAGGACTGGTATGGCATG | + |
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Preference number: 6 (lower is better) Translates to: PLGSPLHLIHRV*AMTKLQDWYGM Trigger: CATGCCATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTGTGGATCAAATGCAGTGGGCTGCCTAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS TCA 72 bp | AGCAATACTCCCACCTTGGTGTGGGGATTGCAGGCTTaGCCCATTGCACCTGGCCTGGAACCAACCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: SNTPTLVWGLQA*PIAPGLEPTFM Trigger: CATAAAGGTTGGTTCCAGGCCAGGTGCAATGGGTCAAGCCTGCAATCCCCACACCAAGGTGGGAGTATTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000529435.5 ENST00000530089.6 ENST00000530769.5 ENST00000546088.5 |
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| CDS CAA 72 bp | AAGCAATACTCCCACCTTGGTGTGGGGATTGCAGGCTaGACCCATTGCACCTGGCCTGGAACCAACCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: KQYSHLGVGIAG*THCTWPGTNLY Trigger: ATAAAGGTTGGTTCCAGGCCAGGTGCAATGGGTCAAGCCTGCAATCCCCACACCAAGGTGGGAGTATTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000529435.5 ENST00000530089.6 ENST00000530769.5 ENST00000546088.5 |
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| CDS CAA 90 bp | AATTCCGGGGATAAAAAGTCCGATCCTTTAGGCAGCCCACTGCATTaGATCCACAGGGTCTGGGCAATGACGAAGCTCCAGGACTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: NSGDKKSDPLGSPLH*IHRVWAMTKLQDWY Trigger: ATACCAGTCCTGGAGCTTCGTCATTGCCCAGACCCTGTGGATCAAATGCAGTGGGCTGCCTAAAGGATCGGACTTTTTATCCCCGGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CAA 72 bp | GATAAAAAGTCCGATCCTTTAGGCAGCCCACTGCATTaGATCCACAGGGTCTGGGCAATGACGAAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DKKSDPLGSPLH*IHRVWAMTKLQ Trigger: CTGGAGCTTCGTCATTGCCCAGACCCTGTGGATCAAATGCAGTGGGCTGCCTAAAGGATCGGACTTTTTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS GCA 72 bp | AGCAGCAAGCCTAGCTGTGTAATTTGTGAGGCTCAATaGAAAATGAAAATGCAGCGTCCCGAGGAGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSKPSCVICEAQ*KMKMQRPEEGA Trigger: AGCTCCCTCCTCGGGACGCTGCATTTTCATTTTGCATTGAGCCTCACAAATTACACAGCTAGGCTTGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527690.1 |
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| CDS CAA 72 bp | GTATTGGTTCAAAAGATGAGTCACTTGATGAATCACTaGCGTGAACACTTTCAGGTGTACGAACAAATTTTC | + |
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Preference number: 6 (lower is better) Translates to: VLVQKMSHLMNH*REHFQVYEQIF Trigger: GAAAATTTGTTCGTACACCTGAAAGTGTTCACGCAAGTGATTCATCAAGTGACTCATCTTTTGAACCAATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000323981.6 ENST00000448108.7 ENST00000526015.5 ENST00000527169.5 ENST00000532455.1 ENST00000534770.1 |
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| CDS GCA 72 bp | CTTAACAGATCAGACAACAAACGTCAAGCTCATTGTTaGTCAAACTGCCAGTTACACAAAATTCTTTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LNRSDNKRQAHC*SNCQLHKILFM Trigger: CATAAAAAGAATTTTGTGTAACTGGCAGTTTGAGCAACAATGAGCTTGACGTTTGTTGTCTGATCTGTTAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530769.5 |
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| CDS GCA 72 bp | ATTATGACTGAACTGTACAACTCGTATTCCCAAATTTaGAATATTGCTGAGAAATGCTTTCACAAACCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: IMTELYNSYSQI*NIAEKCFHKPL Trigger: GAGAGGTTTGTGAAAGCATTTCTCAGCAATATTGCAAATTTGGGAATACGAGTTGTACAGTTCAGTCATAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530769.5 |
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| CDS CAA 72 bp | CTCAAGATAAAAGCTATGAAACTATCCCCTGCCAATTaGATATCACATTCGTTATCTTCAAGATGTGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LKIKAMKLSPAN*ISHSLSSRCVA Trigger: TGCAACACATCTTGAAGATAACGAATGTGATATCAAATTGGCAGGGGATAGTTTCATAGCTTTTATCTTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393259.6 |
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| CDS TCA 72 bp | AGCATCAGATGTCACATGGTCAAGAGAATCTATTCCTaGTTTATCCATCAATTGCTCTTTGTTTTAAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: SIRCHMVKRIYS*FIHQLLFVLNS Trigger: ACTGTTTAAAACAAAGAGCAATTGATGGATAAATCAGGAATAGATTCTCTTGACCATGTGACATCTGATGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000323981.6 ENST00000448108.7 ENST00000526015.5 ENST00000527169.5 ENST00000529508.1 ENST00000532235.1 ENST00000534770.1 |
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| CDS TCA 72 bp | ACTGTACAACTCGTATTCCCAAATTTGCAATATTGCTaGGAAATGCTTTCACAAACCTCTCAAATTCCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TVQLVFPNLQYC*EMLSQTSQIPL Trigger: TAAAGGAATTTGAGAGGTTTGTGAAAGCATTTCTCAGCAATATTGCAAATTTGGGAATACGAGTTGTACAGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530769.5 |
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