RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TAF1C (Homo sapiens)

Ensembl gene IDs: ENSG00000103168

Ensembl transcript IDs: ENST00000341690.10, ENST00000537450.5, ENST00000541676.5, ENST00000544090.5, ENST00000561955.1, ENST00000562330.5, ENST00000562445.5, ENST00000563428.5, ENST00000564208.5, ENST00000564345.5, ENST00000564454.1, ENST00000564774.5, ENST00000565279.5, ENST00000565544.1, ENST00000566183.1, ENST00000566732.6, ENST00000566903.5, ENST00000567759.5, ENST00000568265.1, ENST00000569505.5, ENST00000569609.5, ENST00000570117.5, ENST00000570270.1

Found 1056 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGCAGCTGCAGCTGCCCACCCTGGCCTCCGAGGAGCAGGGGCTaGACGCAGCTGGGCCGGGGCGGAGGCAGCAGTCGGGCCAGCAGG +
Preference number: 1 (lower is better)
Translates to: CSSCSCPPWPPRSRG*TQLGRGGGSSRASR
Trigger: CCTGCTGGCCCGACTGCTGCCTCCGCCCCGGCCCAGCTGCGTGCAGCCCCTGCTCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp CTGCAGCCGGCAGTGTCCTGGGAGGTCCAGGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCAGCATCTCTGCGG +
Preference number: 1 (lower is better)
Translates to: LQPAVSWEVQEAVGA*QSGWVSPGGPASLR
Trigger: CCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCTCCCAGGACACTGCCGGCTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 90 bp TCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACGAAGAGGAGTCCCGGAACACGAGGG +
Preference number: 1 (lower is better)
Translates to: SLRCGHPRSAPEGAQ*SLPNATKRSPGTRG
Trigger: CCCTCGTGTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 90 bp GGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGAGTCCCGGAACACGAGGGTCTCAGG +
Preference number: 1 (lower is better)
Translates to: GAVTHGQHPRVRSEV*PTPRRGVPEHEGLR
Trigger: CCTGAGACCCTCGTGTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 90 bp GGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCTGGGGGCGGAGCTGCTGGTAGAAGA +
Preference number: 1 (lower is better)
Translates to: GHGSQVGCRQEAQHL*GGWSPPGGGAAGRR
Trigger: TCTTCTACCAGCAGCTCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp GTGTCCTGGGAGGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTaGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTGGAGTCC +
Preference number: 1 (lower is better)
Translates to: VSWEVQEAVGAWQSG*VSPGGPASLRRLES
Trigger: GGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCTCCCAGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp TCTGAGGGATCCACATGGCCACTGAGCGAAAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAG +
Preference number: 1 (lower is better)
Translates to: SEGSTWPLSEKLLDS*VRRLGRLVCLPGSE
Trigger: CTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 90 bp GGCTATGAGGGGAGCTGGTGTCCTCTGAGGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCC +
Preference number: 1 (lower is better)
Translates to: GYEGSWCPLRDPHGH*AKSCWTAGSGAWAA
Trigger: GGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGAGGACACCAGCTCCCCTCATAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp CACACAGGAGGAGCCAGGGGCACTTTTAGCAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCCTGGGAGGTCCAGGAAGCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: HTGGARGTFSRAFSH*LQPAVSWEVQEAVG
Trigger: CCCCACAGCTTCCTGGACCTCCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCTGCTAAAAGTGCCCCTGGCTCCTCCTGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp TCCTCTTCCTCCCTCCGCAGCTCTGTGCTGCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTCCACACAGGAGGAGCCAGGGGCACT +
Preference number: 1 (lower is better)
Translates to: SSSSLRSSVLPSIWR*VKVGAVHTGGARGT
Trigger: AGTGCCCCTGGCTCCTCCTGTGTGGACAGCACCCACCTTCACCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGGAGGAAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTaGGCAGTGAAGTCTGCCCAACGCCACGAAGAGGAGTCCCGGAAC +
Preference number: 1 (lower is better)
Translates to: SIFTPVRSPTVSTRG*AVKSAQRHEEESRN
Trigger: GTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 90 bp GAGGTGTGGTGGCACAGCCTGGGGTGTCCCTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCATCTGCCGCTGCTCTGATGGGACGC +
Preference number: 1 (lower is better)
Translates to: EVWWHSLGCPSGVVA*PCSHGASAAALMGR
Trigger: GCGTCCCATCAGAGCAGCGGCAGATGCTCCGTGACTACATGGCCAAGCTACCACCCCAGAGGGACACCCCAGGCTGTGCCACCACACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR GCA 90 bp CGGACGGCCAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: RTASRVSPWTVHVTT*RTGPWSWMRPGFPR
Trigger: CCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTGGCCGTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR GCA 90 bp GGGACGACGGCAGCCAGACCTATGGTCGGTGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTAGGCTCCAGCAGAGGAAATGCAGGG +
Preference number: 1 (lower is better)
Translates to: GTTAARPMVGAFRRS*SRHWILGSSRGNAG
Trigger: CCCTGCATTTCCTCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCGTCGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 90 bp ACCTTGTGTCCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCC +
Preference number: 1 (lower is better)
Translates to: TLCPQKPIRGFFRRG*ELERTGVCCWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACACAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CCA 90 bp CCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCTGGG +
Preference number: 1 (lower is better)
Translates to: PWTVHVTTCRTGPWS*MRPGFPRNWGLSPG
Trigger: CCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CCA 90 bp GCCAGACCTATGGTCGGTGCTTTCAGGCGCTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGAGGAAATGCAGGGAGGGAGTCGATC +
Preference number: 1 (lower is better)
Translates to: ARPMVGAFRRSCSRH*ILGSSRGNAGRESI
Trigger: GATCGACTCCCTCCCTGCATTTCCTCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 90 bp GGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCTGGGGTCA +
Preference number: 1 (lower is better)
Translates to: GRCMSPLAGQVPGAG*VQVSQGIGDCHLGS
Trigger: TGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR GCA 90 bp GTGAGGGCTGAGGCTGATCCCCGTGGCCCCTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCCACAC +
Preference number: 1 (lower is better)
Translates to: VRAEADPRGPFLHLH*LQKGWLPLFTKLPH
Trigger: GTGTGGAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAGGGGCCACGGGGATCAGCCTCAGCCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR TCA 90 bp CTCAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATaGGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: LKFQLWKAHLVPEEG*GALWGLRAAHLVSS
Trigger: TGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR TCA 90 bp TTCTCCAGCATCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACG +
Preference number: 1 (lower is better)
Translates to: FSSISFPRGAKATSP*SKRNRLICSVTSST
Trigger: CGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGATGCTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569609.5
3UTR CCA 90 bp CGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTCAGAACGACCTCTTGGAAATGCAGC +
Preference number: 1 (lower is better)
Translates to: RTGPWSWMRPGFPRN*GLSPGVRTTSWKCS
Trigger: GCTGCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CCA 90 bp GTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCA +
Preference number: 1 (lower is better)
Translates to: VSPWTVHVTTCRTGP*SWMRPGFPRNWGLS
Trigger: TGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR GCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTaGTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGT +
Preference number: 1 (lower is better)
Translates to: RHNREFPQTDMTVTL*SEGTIDSPQVPDPC
Trigger: ACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 90 bp TGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCTG +
Preference number: 1 (lower is better)
Translates to: WLQIAWLIITVASRR*RALLLKFQLWKAHL
Trigger: CAGATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 90 bp ACAAAAGAAACTACTACTGTATTTTGTTGCCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGG +
Preference number: 1 (lower is better)
Translates to: TKETTTVFCCPVPST*LQIAWLIITVASRR
Trigger: CCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTTTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 2 (lower is better)
Translates to: RRLGRLVCLPGSEVLPCCSSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...GCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR TCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp AAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 2 (lower is better)
Translates to: KAAGQLGPALGPPGLSPGPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp CTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCCTCTCCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LGPPGLSPGLRGPALLPLPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...GAGAGGCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp GGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 2 (lower is better)
Translates to: GVPEHEGLRVPVDLPQPIRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...GATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR TCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 2 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp GACGGCAGCCAGACCTATGGTCGGTGCTTTCAGGCGCTCCTGCAGCCGCCACTGCGACGCCCCTTCTCCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 2 (lower is better)
Translates to: DGSQTYGRCFQALLQPPLRRPFS*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCG...CAGTGGCGGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 2 (lower is better)
Translates to: RTGVCCWERVARTLEAWEAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: RTGVCCWERVARTLEAWEVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGGCTCCACCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: QEGLRVPVDLPQPILRAPPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...TGGAGCCCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGCAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 2 (lower is better)
Translates to: RTGVCCWERVARTLEAWEQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CAA 90 bp AGTGTCCTGGGAGGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTaGGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTGGAGTC +
Preference number: 2 (lower is better)
Translates to: SVLGGPGSCGGMAVR*GVARRPSISAEAGV
Trigger: GACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCTCCCAGGACACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp GGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: GPGSCGGMAVRLGVARRPVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...GGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp AAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 2 (lower is better)
Translates to: KAAGQLGPALGPPGLSPGVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...CCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 2 (lower is better)
Translates to: ASAAALMGRPGRMHPESTPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 2 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 2 (lower is better)
Translates to: RTGVCCWERVARTLEAWESGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 2 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 2 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp AGGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 2 (lower is better)
Translates to: RSRKLWGHGSQVGCRQEAASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...GGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCACGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 2 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp ACCACAGCCCGGCGGGCCCTGAGTGTCCAGCATCTTCACTCCGGTGCGGTCACCACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: TTARRALSVQHLHSGAVTTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...GGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp GAGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 2 (lower is better)
Translates to: ERKAAGQLGPALGPPGLSEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...AGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CAA 90 bp GCGGACGGCCAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAG +
Preference number: 2 (lower is better)
Translates to: ADGQQSFSLDGACHH*PDRSLELDASRFPK
Trigger: CTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTGGCCGTCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR GCA 90 bp GACGGCAGCCAGACCTATGGTCGGTGCTTTCAGGCGCTCCTGCAGCCGCCACTGACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: DGSQTYGRCFQALLQPPLTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...CAGTGGCGGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp CACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTGCTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: HSGAVTHGQHPRVRSEVCCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...GCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: ASAAALMGRPGRMHPESTGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp TGGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTGGAGTCCACCTGGGGGTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: WVSPGGPASLRRLESTWGWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...CCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 2 (lower is better)
Translates to: AQRALSTAHRCQTHVPRERSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 2 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR GCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 2 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp TTGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 2 (lower is better)
Translates to: LPDRSLELDASRFPKELGTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...CCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp GAGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: ERKAAGQLGPALGPPGLSGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...AGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: SGLQKVASSASQVSTVEGGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 2 (lower is better)
Translates to: RSICRCSDGTPWAHASGVCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp GAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: EFLPGRCMSPLAGQVPGAVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...AGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVRSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp GTCTGCCCAACGCCACGAAGAGGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 2 (lower is better)
Translates to: VCPTPRRGVPEHEGLRVPLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...AGGGACCCTGAGACCCTCGTGTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 2 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp AAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: KLPHGTVVVRADGQQSFSCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...GGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR TCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 2 (lower is better)
Translates to: AQRALSTAHRCQTHVPREACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 2 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGATGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp CAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGGCTCCAGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: QEGLRVPVDLPQPILRAPVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...TGGAGCCCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp CCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 2 (lower is better)
Translates to: PEHEGLRVPVDLPQPILRSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CAA 90 bp GGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACGACCTCTTGGAAATGCAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: GPWSWMRPGFPRNWG*SPGVRTTSWKCSLS
Trigger: GGACAGGCTGCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CAA 90 bp CCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGTCAGAACGACCTCTTGGAAATGCAG +
Preference number: 2 (lower is better)
Translates to: PDRSLELDASRFPKE*GIVTWGQNDLLEMQ
Trigger: CTGCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: RHLQPALRDDLQANIQNTGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 2 (lower is better)
Translates to: LIITVASRRWRALLLKFQQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 2 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp AGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 2 (lower is better)
Translates to: RSLELDASRFPKELGIVTTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...GGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR TCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 2 (lower is better)
Translates to: HRKTESSTAARETPRKRDGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: PGTRGSQGPCRFAAAHPQEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...CTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 2 (lower is better)
Translates to: LIITVASRRWRALLLKFQGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 2 (lower is better)
Translates to: HRKTESSTAARETPRKRDPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp GCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 2 (lower is better)
Translates to: AKSCWTGGSQGPCRFAAACRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...GGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 2 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGCGAGGAAGAGGGACTTaGTGCTTTAGACATCAAAAT +
Preference number: 2 (lower is better)
Translates to: AQRALSTAHRCQTHVPRERGRGT*CFRHQN
Trigger: ATTTTGATGTCTAAAGCATCAAGTCCCTCTTCCTCG...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 2 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: APNCLAHHHSGLQKVASSCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 2 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: HRKTESSTAARETPRKRDGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 2 (lower is better)
Translates to: YYVIRNQTDPGPCKISSERSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: LQIAWLIITVASRRWRALEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 2 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: LIITVASRRWRALLLKFQCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 2 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMTSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: LIITVASRRWRALLLKFQQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 2 (lower is better)
Translates to: HRKTESSTAARETPRKRDCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LAHHHSGLQKVASSASQVLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: RHLQPALRDDLQANIQNTWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 2 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPARIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LIITVASRRWRALLLKFQLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR TCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 2 (lower is better)
Translates to: KTESSTAARETPRKRDLMQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CAA 90 bp TACAAAAGAAACTACTACTGTATTTTGTTGCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: YKRNYYCILLPCPFN*APNCLAHHHSGLQK
Trigger: CTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTTTCTTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR GCA 72 bp GGCACCGACGCCCCTTCTCCTGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCTCCGAGGAGCAGGGGC +
Preference number: 3 (lower is better)
Translates to: GTDAPSPARCSS*SCPPWPPRSRG
Trigger: GCCCCTGCTCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCGGTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 72 bp CCGGCGGGCCCTGAGTGTCCAGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCACCCGAGGGTGCGCAG +
Preference number: 3 (lower is better)
Translates to: PAGPECPASSLR*GHPRSAPEGAQ
Trigger: CTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGGCCCGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 72 bp AGTCAGGTTGGGTGTCGCCAGGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCTGGGGGCGGAGCTGCT +
Preference number: 3 (lower is better)
Translates to: SQVGCRQEAQHL*GGWSPPGGGAA
Trigger: AGCAGCTCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCAACCTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp GGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTaGAGTCCACCTGGGGGCGGAGCTGCTGGTAGAAGA +
Preference number: 3 (lower is better)
Translates to: GCRQEAQHLCGG*SPPGGGAAGRR
Trigger: TCTTCTACCAGCAGCTCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 72 bp TGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACGAAGAGGAGTCCCGGA +
Preference number: 3 (lower is better)
Translates to: CGHPRSAPEGAQ*SLPNATKRSPG
Trigger: TCCGGGACTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 72 bp ACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTaGGCAGTGAAGTCTGCCCAACGCCACGAAGAGGAG +
Preference number: 3 (lower is better)
Translates to: TPVRSPTVSTRG*AVKSAQRHEEE
Trigger: CTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp GCAGTGTCCTGGGAGGTCCAGGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: AVSWEVQEAVGA*QSGWVSPGGPA
Trigger: TGCTGGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCTCCCAGGACACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp TCCCTCCGCAGCTCTGTGCTGCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTCCACACAGGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: SLRSSVLPSIWR*VKVGAVHTGGA
Trigger: GGCTCCTCCTGTGTGGACAGCACCCACCTTCACCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp TCCACATGGCCACTGAGCGAAAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCG +
Preference number: 3 (lower is better)
Translates to: STWPLSEKLLDS*VRRLGRLVCLP
Trigger: CGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp TCACGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTCAACTCCTGGGAGGGC +
Preference number: 3 (lower is better)
Translates to: SRSICRCSDGTP*AHASGVNSWEG
Trigger: GCCCTCCCAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVLSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp GGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 3 (lower is better)
Translates to: GPGSCGGMAVRLGVARRPRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...GGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 72 bp ACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGAGTCCCGGAACACGAG +
Preference number: 3 (lower is better)
Translates to: THGQHPRVRSEV*PTPRRGVPEHE
Trigger: CTCGTGTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR GCA 72 bp CCAGGGGCACTTTTAGCAGGGCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGGAGGTCCAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: PGALLAGPSATG*SRQCPGRSRKL
Trigger: CAGCTTCCTGGACCTCCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCTGCTAAAAGTGCCCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 72 bp GGGAGCTGGTGTCCTCTGAGGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCT +
Preference number: 3 (lower is better)
Translates to: GSWCPLRDPHGH*AKSCWTAGSGA
Trigger: AGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGAGGACACCAGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CCA 72 bp TGGCACAGCCTGGGGTGTCCCTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCATCTGCCGCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: WHSLGCPSGVVA*PCSHGASAAAL
Trigger: CAGAGCAGCGGCAGATGCTCCGTGACTACATGGCCAAGCTACCACCCCAGAGGGACACCCCAGGCTGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCACACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 3 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CAA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 3 (lower is better)
Translates to: RTGVCCWERVARTLEAWEQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR TCA 72 bp CTTGGCCATGTAGTCACGGAGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCATGCATCCGGAGTCAA +
Preference number: 3 (lower is better)
Translates to: LGHVVTEHLPLL*WDALGACIRSQ
Trigger: TTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCGTGACTACATGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR TCA 72 bp CCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGTGTGTGCTGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: PQKPIRGFFRRG*ELERTGVCCWE
Trigger: CTCCCAGCAGCACACACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR GCA 72 bp GCAGCCAGACCTATGGTCGGTGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTAGGCTCCAGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: AARPMVGAFRRS*SRHWILGSSRG
Trigger: TCCTCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CAA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: ASAAALMGRPGRMHPESTGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp GGGCAGCCCACCTTGTGTCCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: GQPTLCPQKPIRGFFRRGGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...GCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACACAAGGTGGGCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 3 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CAA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 3 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACCTCGGGCCATGGCCTaGCGGAGCACACCCAGCCGC +
Preference number: 3 (lower is better)
Translates to: LIITVASRRWRALLLKFQPRAMA*RSTPSR
Trigger: GCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR TCA 72 bp CAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATaGGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTT +
Preference number: 3 (lower is better)
Translates to: QLWKAHLVPEEG*GALWGLRAAHL
Trigger: AAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
3UTR TCA 72 bp GGGAGCTGGTGTCCTCTGAGGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: GSWCPLRDPHGH*AKSCWTGGSQG
Trigger: ACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGAGGACACCAGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR GCA 72 bp AGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGT +
Preference number: 3 (lower is better)
Translates to: SRVSPWTVHVTT*RTGPWSWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CCA 72 bp ACTCCACCCTCACCAAACACGAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACAGGAAGGCGTGAGAAC +
Preference number: 3 (lower is better)
Translates to: TPPSPNTRSQHS*PPFHWTGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCTCGTGTTTGGTGAGGGTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 72 bp CAGGGACACCCCCAGGGCTGGTGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTGACCACTGTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: QGHPQGWCPPRS*SSFFTLTTVFF
Trigger: GAAGAAGACAGTGGTCAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569505.5
3UTR-3UTR CAA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGATACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 3 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 72 bp TGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGG +
Preference number: 3 (lower is better)
Translates to: WTVHVTTCRTGP*SWMRPGFPRNW
Trigger: CCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: ASAAALMGRPGRMHPESTLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGGCTCCACCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: QEGLRVPVDLPQPILRAPPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...TGGAGCCCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR-3UTR CAA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: LQIAWLIITVASRRWRALGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 3 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 72 bp GTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTG +
Preference number: 3 (lower is better)
Translates to: VHVTTCRTGPWS*MRPGFPRNWGL
Trigger: CAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 3 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 3 (lower is better)
Translates to: LIITVASRRWRALLLKFQHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR TCA 72 bp ATCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTGATCTGCTCAGTCACA +
Preference number: 3 (lower is better)
Translates to: ISFPRGAKATSP*SKRNRLICSVT
Trigger: TGTGACTGAGCAGATCAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569609.5
3UTR GCA 72 bp AGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTaGTCAGAGGGCACTATCGACAGCCCACAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: REFPQTDMTVTL*SEGTIDSPQVP
Trigger: TGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR GCA 72 bp ATGTCACCACTTGCCGGACAGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGAATTGGGGATTGTCAC +
Preference number: 3 (lower is better)
Translates to: MSPLAGQVPGAG*VQVSQGIGDCH
Trigger: GTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: ASAAALMGRPGRMHPESTNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR GCA 72 bp CCTTTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTCCACACGGCACAGTGG +
Preference number: 3 (lower is better)
Translates to: PFSTCIACRRVG*HCLPNFHTAQW
Trigger: CCACTGTGCCGTGTGGAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR CCA 72 bp GCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTGGAAATGCAGCCTGTC +
Preference number: 3 (lower is better)
Translates to: ASRFPKELGIVT*GQNDLLEMQPV
Trigger: GACAGGCTGCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGTACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 3 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCCACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 3 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: LQIAWLIITVASRRWRALLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 3 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR TCA 72 bp ACAGGCCCACCGGCACCTCCAGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACAAAATACAAAAGAAAC +
Preference number: 3 (lower is better)
Translates to: TGPPAPPACLAG*SSGEYTKYKRN
Trigger: GTTTCTTTTGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCGGTGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 72 bp ATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAG +
Preference number: 3 (lower is better)
Translates to: IAWLIITVASRR*RALLLKFQLWK
Trigger: CTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 3 (lower is better)
Translates to: LIITVASRRWRALLLKFQQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 3 (lower is better)
Translates to: LIITVASRRWRALLLKFQWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: KTESSTAARETPRKRDLMLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: LIITVASRRWRALLLKFQNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: HRKTESSTAARETPRKRDNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR-3UTR CAA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 3 (lower is better)
Translates to: KTESSTAARETPRKRDLMWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CCA 72 bp ACTACTACTGTATTTTGTTGCCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTCATCATCACAGTGGCC +
Preference number: 3 (lower is better)
Translates to: TTTVFCCPVPST*LQIAWLIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGCTCGGGCCATGGCCTTaGGGAGCACACCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LDSWVRRLGRLVCLPGSELGPWP*GAHPAA
Trigger: AGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAG...CTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp GGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: GPGSCGGMAVRLGVARRPAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...GGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp AGCTCTGCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: SSAKWLATDVPRMGPPRIGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...TATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGCAGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR GCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: RTGVCCWERVARTLEAWERTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RTGVCCWERVARTLEAWEKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
3UTR CAA 72 bp CGGCCTGCCCAGGCTTCCCCCAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCGGGTGCAGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPAQASPRRSLS*SSRPDSGAGGG
Trigger: GCCACCCCCTGCACCCGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGGAAGCCTGGGCAGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp GCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGCGGCGCTGGGTCCCAGGGATCGATaGGGGGAGGCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: ARHRRAQDGAPEDREAALGPRDR*GEAAWG
Trigger: TCCCCATGCTGCCTCCCCTCATCGATCCCTGGGACC...CAGCGCCGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR TCA 90 bp TCTCCCGCCGCCGAGAGCTGGAAGAGCACCAGGCCTGGTGTGGGCGCTGAGGGCCAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: SPAAESWKSTRPGVGAEGQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...GCCCTCAGCGCCCACACCAGGCCTGGTGCTCTTCCAGCTCTCGGCGGCGGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGATCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: RTGVCCWERVARTLEAWEPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCCTCTCCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LGPPGLSPGLRGPALLPLLCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...GAGAGGCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: LDSWVRRLGRLVCLPGSEDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...CTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RSICRCSDGTPWAHASGVPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLGASSRVDQLPELGCPSPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp ACCACAGCCCGGCGGGCCCTGAGTGTCCAGCATCTTCACTCCGGTGCGGTCACCCTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: TTARRALSVQHLHSGAVTLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...GGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTGTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCGCTGGGTCCGGCGCTTaGGCCGCCTGGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSICRCSDGTPWAHASGVAGSGA*AAWSVS
Trigger: GGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTGCCCAACGCGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VRSPTVSTRGCAVKSAQRAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...GCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVSSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp GTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTGCCCAACGCCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: VRSPTVSTRGCAVKSAQRPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...GCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: RRLGRLVCLPGSEVLPCCQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...GCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp TGGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTGGAGTCCACCTGGGGGGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WVSPGGPASLRRLESTWGEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...CCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCAGCTCTGCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGAACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: AALPSGSPPTCPGWGPRGTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...TCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGCAGAGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp AGCTCTGCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGGACACCCCCAGGGCTaGTGTCCACCGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSAKWLATDVPRMGPPRIGHPQG*CPPRSW
Trigger: CCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCC...TATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGCAGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GGGCAGCCCACCTTGTGTCCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GQPTLCPQKPIRGFFRRGGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...GCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACACAAGGTGGGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVATSRD*KLVRGA
Trigger: GGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGC...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR TCA 90 bp GCCCAGGGACACCCCCAGGGCTGGTGTCCACCGAGGTCCTGGAGCAGCTTCTTCGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: AQGHPQGWCPPRSWSSFFGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...GAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCCCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR TCA 90 bp ACCACAGCCCGGCGGGCCCTGAGTGTCCAGCATCTTCACTCCGGTGCGGTCACCCCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TTARRALSVQHLHSGAVTPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...GGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTGTGGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GPGSCGGMAVRLGVARRPPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...GGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGACGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKARCSS*SCPPWP
Trigger: AGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCTCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPGSCGGMAVRLGVARRPSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...GGGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLGASSRVDQLPELGCPSRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCCTCTCCGGCAGCCAGACCTATaGTCGGTGCTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGPPGLSPGLRGPALLPLRQPDL*SVLSGA
Trigger: AGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCG...GAGAGGCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: ERKAAGQLGPALGPPGLSTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...AGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp GTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGAACCCAGGCCAGCGCGCCGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VDQLPELGCPSRNPGQRAGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...GGCGCGCTGGCCTGGGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGTCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp AGGGACACCCCCAGGGCTGGTGTCCACCGAGGTCCTGGAGCAGCTTCTTCACACGAGAGGCCCAGGGGTTaGCGGCTCCCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RDTPRAGVHRGPGAASSHERPRG*RLPQQV
Trigger: GACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTC...GTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR GCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RSICRCSDGTPWAHASGVEAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCGGGCTCCGAGGTCCTaGCCTGCTGCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQRAPRS*PAASPT
Trigger: GGTGGGAGAGGCAGCAGGGCAGGACCTCGGAGCCCG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: KAAGQLGPALGPPGLSPGLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...CCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCGATACCGGCACCCTCCGCACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: AQSHPARLGAASDTGTLRTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...GCGGAGGGTGCCGGTATCGGAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp CGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGCGGCGCTGTCGCCCACAGCAGGTCCTTaGTCACATGCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: RHRRAQDGAPEDREAALSPTAGP*SHAVPH
Trigger: ATGGGGCACTGCATGTGACCAAGGACCTGCTGTGGG...CGACAGCGCCGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGATCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRSCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGCATCTCTGCGGAGGCTaGAGTCCACCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVHLCGG*SPPGGG
Trigger: TCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATG...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GTCTGCCCAACGCCACGAAGAGGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTGCTGCCCTCGGGCCATaGCCTTGCGGAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: VCPTPRRGVPEHEGLRVPAALGP*PCGAHP
Trigger: TGGGTGTGCTCCGCAAGGCCATGGCCCGAGGGCAGC...AGGGACCCTGAGACCCTCGTGTTCCGGGACTCCTCTTCGTGGCGTTGGGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGCTGGGTCCGGCGCTTaGGCCGCCTGGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQAGSGA*AAWSVS
Trigger: GGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TCTCCCGCCGCCGAGAGCTGGAAGAGCACCAGGCCTGGTGTGGGCGCTGAGGGCCAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: SPAAESWKSTRPGVGAEGQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...GCCCTCAGCGCCCACACCAGGCCTGGTGCTCTTCCAGCTCTCGGCGGCGGGAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGCAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: VLGASSRVDQLPELGCPSPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGATGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPKWASA*CSPDPG
Trigger: GCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTT...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACTCTGGCAGAGTCAGTaGGTCTCGCCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKLWQSQ*VSPGDP
Trigger: GGGGTCACCTGGCGAGACGCACTGACTCTGCCAGAG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000341690.10
CDS-3UTR GCA 90 bp GTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTGCCCAACGCGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VRSPTVSTRGCAVKSAQRVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...GCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VLGASSRVDQLPELGCPSVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPRERTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAGCTCTGCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATCCAAGAGGAACCGGCTaGTCAGTCACATCCAGCACG +
Preference number: 4 (lower is better)
Translates to: QLCQVARHRRAQDGAPEDPRGTG*SVTSST
Trigger: CGTGCTGGATGTGACTGAGCAGCCGGTTCCTCTTGG...ATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGCAGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR GCA 90 bp GACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGCGGCGCTGTCGGTTGCTGCTTGGTCACATGCAGTaGCCCATTGTGACCCCGGCC +
Preference number: 4 (lower is better)
Translates to: DVPRMGPPRIEKRRCRLLLGHMQ*PIVTPA
Trigger: GGCCGGGGTCACAATGGGGCACTGCATGTGACCAAG...CAGCAACCGACAGCGCCGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp GACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGCGGCGCTGTCGGTTGCTGATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: DVPRMGPPRIEKRRCRLLMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...CAGCAACCGACAGCGCCGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp CTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCGATACCGGCACCCTCCGCGATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: LSHIQHDSGPLPIPAPSAMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...CGCGGAGGGTGCCGGTATCGGAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGGACACCCCCAGGGCTaGTGTCCACCGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREGHPQG*CPPRSW
Trigger: CCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAATGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGAACCCAGGCCAGCGCGCCACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VDQLPELGCPSRNPGQRATRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...GGCGCGCTGGCCTGGGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGTCTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAAGTCTGCCCAACGCGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: VRSPTVSTRGCAVKSAQREAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...GCGTTGGGCAGACTTCACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGCTGCCCTCGGGCCATaGCCTTGCGGAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREAALGP*PCGAHP
Trigger: TGGGTGTGCTCCGCAAGGCCATGGCCCGAGGGCAGC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGAAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGKWASA*CSPDPG
Trigger: GCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTT...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGGTCCCAGGGATCGATaGGGGGAGGCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQGPRDR*GEAAWG
Trigger: TCCCCATGCTGCCTCCCCTCATCGATCCCTGGGACC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp GAGCGAAAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: ERKAAGQLGPALGPPGLSFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...AGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTTTCGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR TCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHREAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: ASAAALMGRPGRMHPESTDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp CCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: PEHEGLRVPVDLPQPILRERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: RTGVCCWERVARTLEAWELGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CTTGGGCCGCCTGGTCTGTCTCCCGGGCTCCGAGGTCCTGCCCTGCTGCCTCTCGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LGPPGLSPGLRGPALLPLGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...GAGAGGCAGCAGGGCAGGACCTCGGAGCCCGGGAGACAGACCAGGCGGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGAACCCAGGCCAGCGCGCCGAGTGCCCCAGGTACTaGGTAAGCAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: VDQLPELGCPSRNPGQRAECPRY*VSRTRS
Trigger: GGAACGTGTCCTGCTTACCCAGTACCTGGGGCACTC...GGCGCGCTGGCCTGGGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGTCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EFLPGRCMSPLAGQVPGASGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...AGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: AKWLATDVPRMGPPRIEKKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...CTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR TCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: PGTRGSQGPCRFAAAHPQLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...CTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GCTGAGGGCAAGGGCGGGACGACGGCAGCCAGACCTATGGTCGGTGCTTTCAGGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AEGKGGTTAARPMVGAFRVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...CCTGAAAGCACCGACCATAGGTCTGGCTGCCGTCGTCCCGCCCTTGCCCTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TGGGTGTCGCCAGGAGGCCCAGCATCTCTGCGGAGGCTGGAGTCCACCTGGGGGTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: WVSPGGPASLRRLESTWGFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...CCCCCAGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTCCTGGCGACACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QQSFSLDGACHHLPDRSLRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...CAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp TCCAAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACTCGGGGCCGCGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKRNRLICSVTSSTTRGRAGQKQ*RAEGAG
Trigger: CCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGC...GCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp CAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGAACCCAGGCCAATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: QQGRPAARTGVSFQEPRPMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...TGGCCTGGGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp AGCTCTGCCAAGTGGCTCGCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATATGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: SSAKWLATDVPRMGPPRICPPRS*SSFFTL
Trigger: CAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACA...TATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCCACTTGGCAGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp GGGCAGCCCACCTTGTGTCCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: GQPTLCPQKPIRGFFRRGTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...GCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACACAAGGTGGGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPRECRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRTRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKRSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LPDRSLELDASRFPKELGRAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...CCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GVPEHEGLRVPVDLPQPIVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...GATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGGACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGATCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: PEHEGLRVPVDLPQPILRPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPRSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQATSRD*KLVRGA
Trigger: GGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGAACTTGCCCCCAGGGCTaGTGTCCACCGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGTCPQG*CPPRSW
Trigger: CCAGGACCTCGGTGGACACCAGCCCTGGGGGCAAGT...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGTGCGTCTCGCCAGGTaGCCCCGGCCTCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALVRLAR*PRPRRG
Trigger: ACCACGACGAGGCCGGGGTCACCTGGCGAGACGCAC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341690.10
CDS-3UTR TCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGTGCGTCTCGCCAGGTaGCCCCGGCCTCGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLVRLAR*PRPRRG
Trigger: ACCACGACGAGGCCGGGGTCACCTGGCGAGACGCAC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341690.10
ENST00000570117.5
CDS-3UTR TCA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGACAGTGCCCCATTCTCTaGGTTCTGGGGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGQCPIL*VLGLGL
Trigger: GAGGCCCAGCCCCAGAACTCAGAGAATGGGGCACTG...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGCCTGGTGTGGGCGCTaGGGGCAAGGGCGGGACGAC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSAWCGR*GQGRDD
Trigger: GTCGTCCCGCCCTTGCCCTCAGCGCCCACACCAGGC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp AGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RSLELDASRFPKELGIVTHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...GGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp GCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACT +
Preference number: 4 (lower is better)
Translates to: AKSCWTGGSQGPCRFAAAGAVGC*GKPRDT
Trigger: AGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...GGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR TCA 90 bp CTCCAGCATCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATGATCCAAGAGGGTCCCAGGGATCTCTaGGTTCTGGGGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LQHQLPQGRKGYVSMIQEGPRDL*VLGLGL
Trigger: GAGGCCCAGCCCCAGAACTCAGAGATCCCTGGGACC...CTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGATGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGAGAGGCCCAGGGGTTaGCGGCTCCCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGERPRG*RLPQQV
Trigger: GACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGCTCGCCACCGACGTaGCCAGGATGGGGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGSPPT*PGWGPR
Trigger: TCGGGGGCCCCATCCTGGGCACGTCGGTGGCGAGCC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGTGGGGAGGTGTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: CAAGSEWPGRWRPGSGEVCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...CACCTCCCCACTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGARCSS*SCPPWP
Trigger: AGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCGGGCTCCGAGGTCCTaGCCTGCTGCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGRAPRS*PAASPT
Trigger: GGTGGGAGAGGCAGCAGGGCAGGACCTCGGAGCCCG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPTSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRTSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: AKSCWTGGSQGPCRFAAAPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...GGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CCA 90 bp GGGCAGCCCACCTTGTGTCCTCAGAAGCCCATTCGAGGCTTCTTCCGGAGGGGCCCCACAGCAGGTCCTTaGTCACATGCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: GQPTLCPQKPIRGFFRRGPTAGP*SHAVPH
Trigger: ATGGGGCACTGCATGTGACCAAGGACCTGCTGTGGG...GCCCCTCCGGAAGAAGCCTCGAATGGGCTTCTGAGGACACAAGGTGGGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAATGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKCPPRS*SSFFTL
Trigger: CAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACA...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGATGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPRSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVRAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGCTGGGTCCGGCGCTTaGGCCGCCTGGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLAGSGA*AAWSVS
Trigger: GGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGACCAAGCACCACACTaGCCACCTCGAGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPDQAPH*PPRETG
Trigger: TCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CAA 72 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QQSFSLDGACHH*PDRSLELDASR
Trigger: CCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCAGTGCCCCATTCTCTaGGTTCTGGGGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVQCPIL*VLGLGL
Trigger: GAGGCCCAGCCCCAGAACTCAGAGAATGGGGCACTG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAACTAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASAAALMGRPGRMHPESTKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...AGTTGACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSSSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 4 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGAGAGGCCCAGGGGTTaGCGGCTCCCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGERPRG*RLPQQV
Trigger: GACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACGGCTCCCGAGCGGCTaGAGATGGCCAGCTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQRLPSG*RWPAPR
Trigger: CCGGGGAGCTGGCCATCTGCAGCCGCTCGGGAGCCG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPLQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: PGTRGSQGPCRFAAAHPQAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...CTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCGGGCTCCGAGGTCCTaGCCTGCTGCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLRAPRS*PAASPT
Trigger: GGTGGGAGAGGCAGCAGGGCAGGACCTCGGAGCCCG...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCGGGCTCCGAGGTCCTaGCCTGCTGCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIRAPRS*PAASPT
Trigger: GGTGGGAGAGGCAGCAGGGCAGGACCTCGGAGCCCG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGGGCTCCGAGGTCCTaGCCTGCTGCCTCTCCCACC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSRAPRS*PAASPT
Trigger: GGTGGGAGAGGCAGCAGGGCAGGACCTCGGAGCCCG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: QQSFSLDGACHHLPDRSLVEPQL*HSGRVS
Trigger: GCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTAC...CAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CCAGGGCTGGTGTCCACCGAGGTCCTGGAGCAGCTTCTTCACACTGACCACTGTCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: PGLVSTEVLEQLLHTDHCLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...ACAGTGGTCAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CCA 90 bp AAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: KRNRLICSVTSSTTRGRFLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...GAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPCPPRS*SSFFTL
Trigger: CAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACACCCCCAGGGCTaGTGTCCACCGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLGHPQG*CPPRSW
Trigger: CCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCCGAGCGGCTGCAGATaGCCAGCTCCCCGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEPSGCR*PAPRAG
Trigger: ACCTGCCCGGGGAGCTGGCCATCTGCAGCCGCTCGG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGAGTGCCCCAGGTACTaGGTAAGCAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREECPRY*VSRTRS
Trigger: GGAACGTGTCCTGCTTACCCAGTACCTGGGGCACTC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGAGTGCCCCAGGTACTaGGTAAGCAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQECPRY*VSRTRS
Trigger: GGAACGTGTCCTGCTTACCCAGTACCTGGGGCACTC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCATCTCTGCGGAGGCTaGAGTCCACCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGHLCGG*SPPGGG
Trigger: TCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGCTGCCCTCGGGCCATaGCCTTGCGGAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLAALGP*PCGAHP
Trigger: TGGGTGTGCTCCGCAAGGCCATGGCCCGAGGGCAGC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGCTGGGTCCGGCGCTTaGGCCGCCTGGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVAGSGA*AAWSVS
Trigger: GGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGGTCCCAGGGATCGATaGGGGGAGGCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALGPRDR*GEAAWG
Trigger: TCCCCATGCTGCCTCCCCTCATCGATCCCTGGGACC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGGTCCCAGGGATCGATaGGGGGAGGCAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGGPRDR*GEAAWG
Trigger: TCCCCATGCTGCCTCCCCTCATCGATCCCTGGGACC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCCCGAGGGTGCGCAGTaGAGTCTGCCCAACGCCACG +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEPEGAQ*SLPNAT
Trigger: CGTGGCGTTGGGCAGACTTCACTGCGCACCCTCGGG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREDPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCATCTGCCGCTGCTCTaGTGGGACGCCCTGGGCGCA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSHLPLL*WDALGA
Trigger: TGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGAGGTCCTTGGTCACATaGAGTGCCCCATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRRSLVT*SAPFSE
Trigger: CTCAGAGAATGGGGCACTGCATGTGACCAAGGACCT...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: QQSFSLDGACHHLPDRSLHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVARCSS*SCPPWP
Trigger: AGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSARCSS*SCPPWP
Trigger: AGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGCTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: PEHEGLRVPVDLPQPILRLQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGGGCCATGGCCTTaGGGAGCACACCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLGPWP*GAHPAA
Trigger: AGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSLCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTAGGACGGGTGTGTGCTaGTGGGAGCGAGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVRTGVC*WERVAR
Trigger: CCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCTCTGGCAGAGTCAGTaGGTCTCGCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: KRNRLICSVTSSTTRGRFLWQSQ*VSPAAH
Trigger: ATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAG...GAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp AAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: KLPHGTVVVRADGQQSFSTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...GGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: EFLPGRCMSPLAGQVPGARSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...AGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALRAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGCTGCCCTCGGGCCATaGCCTTGCGGAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGAALGP*PCGAHP
Trigger: TGGGTGTGCTCCGCAAGGCCATGGCCCGAGGGCAGC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGAACCCAGGCCATCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QQGRPAARTGVSFQEPRPSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...TGGCCTGGGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSSGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVSGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLSGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTACGGGTGTGTGCTGCTaGGAGCGAGTGGCCCGGACG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLTGVCC*ERVART
Trigger: CGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LPDRSLELDASRFPKELGVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp TTGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LPDRSLELDASRFPKELGGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...CCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp TCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATGATCCAAGAGGAACCGGCGACCAAGCACCACACTaGCCACCTCGAGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: SASPGAQRLRLHDPRGTGDQAPH*PPRETG
Trigger: TCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTC...GCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTKWASA*CSPDPG
Trigger: GCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTT...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACTCGGGGCCGCTTCAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: KRNRLICSVTSSTTRGRFKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...GAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR TCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDSSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp GAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: EFLPGRCMSPLAGQVPGADPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...AGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: KLPHGTVVVRADGQQSFSSTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...GGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTARCSS*SCPPWP
Trigger: AGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCACCGACGCCCCTTCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSHRRPF*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGAAGGGGCGTCGGTG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341690.10
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSEAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTTCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCCCTCCGCAGCTCTGTaGTGCCCAGCATCTGGCGGT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSPSAAL*CPASGG
Trigger: ACCGCCAGATGCTGGGCAGCACAGAGCTGCGGAGGG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTCGGGCCATGGCCTTaGGGAGCACACCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQLGPWP*GAHPAA
Trigger: AGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACTCGGGCCATGGCCTTaGGGAGCACACCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLGPWP*GAHPAA
Trigger: AGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSLCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCGGAGCATCTGCCGCTaGTCTGATGGGACGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRSICR*SDGTPW
Trigger: CCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSAGQKQ*RAEGAG
Trigger: CCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCGACGCCCCTTCTCCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRRPFS*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGACGCCCCTTCTCCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSRRPFS*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCGACGCCCCTTCTCCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIRRPFS*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AQRALSTAHRCQTHVPREGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCATCTCTGCGGAGGCTaGAGTCCACCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSHLCGG*SPPGGG
Trigger: TCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSERAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVRAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTAGGGCCTTCAGCCACTaGCTGCAGCCGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSRAFSH*LQPAVS
Trigger: GGACACTGCCGGCTGCAGCCAGTGGCTGAAGGCCCT...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGGCGCTTGGGCCGCCTaGTCTGTCTCCCGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAGAWAA*SVSRAP
Trigger: CGGAGCCCGGGAGACAGACCAGGCGGCCCAAGCGCC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGCTGCTGGGAGCGAGTaGCCCGGACGCTGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDAAGSE*PGRWRP
Trigger: AGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RSRKLWGHGSQVGCRQEALKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...GGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSATSRD*KLVRGA
Trigger: GGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTCTCCATGATCCAAGAGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VSMIQEEPADLLSHIQHDATSRD*KLVRGA
Trigger: GGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGC...GTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCTCTTGGATCATGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR TCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCAGTGCCCCATTCTCTaGGTTCTGGGGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIQCPIL*VLGLGL
Trigger: GAGGCCCAGCCCCAGAACTCAGAGAATGGGGCACTG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSESSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCAGCTCCCCGGGCAGGTaGGGGCTGAGGCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPASSPGR*GLRLIP
Trigger: GGGGATCAGCCTCAGCCCTCACCTGCCCGGGGAGCT...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp TCCCTCCAGCTTGAAATTCTCCAGCATCAGCTTCCCCAGGGGCGCAAAGGCTACCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: SLQLEILQHQLPQGRKGYLASCT*KRGQGR
Trigger: ACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAG...GTAGCCTTTGCGCCCCTGGGGAAGCTGATGCTGGAGAATTTCAAGCTGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCTGGCAGAGTCAGTaGGTCTCGCCAGGTGACCCC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLWQSQ*VSPGDP
Trigger: GGGGTCACCTGGCGAGACGCACTGACTCTGCCAGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341690.10
ENST00000570117.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGAGAGGCCCAGGGGTTaGCGGCTCCCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDERPRG*RLPQQV
Trigger: GACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGSTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTPARPQ*RPHPEA
Trigger: TGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGAGCTCTGGCACGAAGCCTCTaGCCCCAAACGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: EFLPGRCMSPLAGQVPGALARSL*PQTKKQ
Trigger: TTGCTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAG...AGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSEAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATCCGCAGCTCTGTGCTaGCCAGCATCTGGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTSAALC*PASGGG
Trigger: CCCACCGCCAGATGCTGGGCAGCACAGAGCTGCGGA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGACGCCCTGGGCGCATaGATCCGGAGTCAACTCCTG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGDALGA*IRSQLL
Trigger: CAGGAGTTGACTCCGGATGCATGCGCCCAGGGCGTC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: VLGASSRVDQLPELGCPSTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGGCGCAGCGGAGCCCTaGCTCCCAGCACAGACTAAA +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGGAAEP*LPAQTK
Trigger: TTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLAGQKQ*RAEGAG
Trigger: CCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp ATTCTCCAGCATCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATGATCCAAGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ILQHQLPQGRKGYVSMIQVEPQL*HSGRVS
Trigger: GCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTAC...TTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGATGCTGGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHITPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QQSFSLDGACHHLPDRSLVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...CAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: AKSCWTGGSQGPCRFAAASRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...GGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALTRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLTRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCCAGCATCTGGCGGTaGGTGAAGGTGGGTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPSIWR*VKVGAV
Trigger: GACAGCACCCACCTTCACCCACCGCCAGATGCTGGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTCTGATGGGACGCCCTaGGCGCATGCATCCGGAGTC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSSDGTP*AHASGV
Trigger: GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GGAAGGATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGATGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRMRGSLGLEGSPPCVLRWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...TCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCATCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGRSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGACCAAGCACCACACTaGCCACCTCGAGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGDQAPH*PPRETG
Trigger: TCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEKWASA*CSPDPG
Trigger: GCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACCAGCCCGGCGGGCCCTaGGTGTCCAGCATCTTCACT +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDQPGGP*VSSIFT
Trigger: AGTGAAGATGCTGGACACTCAGGGCCCGCCGGGCTG...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSLASCT*KRGQGR
Trigger: ACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGLASCT*KRGQGR
Trigger: ACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAG...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGAGAGGCCCAGGGGTTaGCGGCTCCCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAERPRG*RLPQQV
Trigger: GACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSSTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGLQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTEAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDLCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGAGAGGACGGGTGTGTaGTGCTGGGAGCGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDERTGV*CWERVA
Trigger: GGCCACTCGCTCCCAGCAGCACACACCCGTCCTCTC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: GVPEHEGLRVPVDLPQPIEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...GATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALTSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACCTCATCAGCAGCTCTaGAGGGGCCTCACTCCACCC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQPHQQL*RGLTPP
Trigger: GGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATGAGG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTAGQKQ*RAEGAG
Trigger: CCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTCTGGCAGAGTCAGTaGGTCTCGCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALLWQSQ*VSPAAH
Trigger: ATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCTCTGGCAGAGTCAGTaGGTCTCGCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGLWQSQ*VSPAAH
Trigger: ATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCCCAAGGAATTGGGGATTGTCACCTGGGGTCAGAACGACCTCTTGGAAATCGACGCCCCTTCTCCTaGCAGGTGCAGCAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VSQGIGDCHLGSERPLGNRRPFS*QVQQLQ
Trigger: CTGCAGCTGCTGCACCTGGCAGGAGAAGGGGCGTCG...ATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEVEPQL*HSGRVS
Trigger: GCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTAC...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSELVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSETSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTCRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSTRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGAGTGCCCCAGGTACTaGGTAAGCAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLECPRY*VSRTRS
Trigger: GGAACGTGTCCTGCTTACCCAGTACCTGGGGCACTC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGSCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGSCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLSCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCGGCAGCCAGACCTATaGTCGGTGCTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRQPDL*SVLSGA
Trigger: AGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSRSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCTCGGGTGCAGGGGGTaGCTCTGCCGCAGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMLGCRG*LCRREG
Trigger: TCCCTCCCTGCGGCAGAGCCACCCCCTGCACCCGAG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGCTGGGTCCGGCGCTTaGGCCGCCTGGTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMAGSGA*AAWSVS
Trigger: GGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAAGCTGCTGGACAGCTaGGTCCGGCGCTTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEKLLDS*VRRLGR
Trigger: GCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSESGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: KLPHGTVVVRADGQQSFSSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...GGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGACCAAGCACCACACTaGCCACCTCGAGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSDQAPH*PPRETG
Trigger: TCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CAA 72 bp TCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SLELDASRFPKE*GIVTWGQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMKWASA*CSPDPG
Trigger: GCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGGGCGCTGTCGGTTGCTaGGGTAAGCCCAGGGACACC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEGAVGC*GKPRDT
Trigger: GGTGTCCCTGGGCTTACCTCAGCAACCGACAGCGCC...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLDPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGCCACTCAGGGCTATaGGGGGAGCTGGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDGHSGL*GELVSS
Trigger: AGAGGACACCAGCTCCCCTCATAGCCCTGAGTGGCC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGCGAGGAAGAGGGACTTaGTGCTTTAGACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRRGRGT*CFRHQN
Trigger: ATTTTGATGTCTAAAGCATCAAGTCCCTCTTCCTCG...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGT +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHILASCT*KRGQGR
Trigger: ACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAG...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTSTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQSTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHITTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQVHVTT*RTGPWS
Trigger: GCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCAC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCTGGCACGAAGCCTCTaGCCCCAAACGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGLARSL*PQTKKQ
Trigger: TTGCTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCCCTTCAGCCACTGGCTaGAGCCGGCAGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAPSATG*SRQCPG
Trigger: CCCAGGACACTGCCGGCTGCAGCCAGTGGCTGAAGG...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCTCGGGCCATGGCCTTaGGGAGCACACCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMLGPWP*GAHPAA
Trigger: AGCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCCTCTGCAGCAGGAGCTaGCCTCGGGCCATGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPALCSRS*PRAMAL
Trigger: CAAGGCCATGGCCCGAGGGCAGCTCCTGCTGCAGAG...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSTSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQVEPQL*HSGRVS
Trigger: GCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTAC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCCCACAGCAGGTCCTTaGTCACATGCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVPTAGP*SHAVPH
Trigger: ATGGGGCACTGCATGTGACCAAGGACCTGCTGTGGG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCCACAGCAGGTCCTTaGTCACATGCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPTAGP*SHAVPH
Trigger: ATGGGGCACTGCATGTGACCAAGGACCTGCTGTGGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLCPPRS*SSFFTL
Trigger: CAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGGACACCCCCAGGGCTaGTGTCCACCGAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMGHPQG*CPPRSW
Trigger: CCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAACCAGCTGCCCGAACTaGGGTGTCCTTCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQTSCPN*GVLPGT
Trigger: GGTTCCTGGAAGGACACCCCAGTTCGGGCAGCTGGT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLTGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGAGTGCCCCAGGTACTaGGTAAGCAGGACACGTTCC +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSECPRY*VSRTRS
Trigger: GGAACGTGTCCTGCTTACCCAGTACCTGGGGCACTC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGGGAGGGGAGGCCATaGTTCCACTTCAGCATCGGC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDGEGRP*FHFSIG
Trigger: GCCGATGCTGAAGTGGAACCATGGCCTCCCCTCCCC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSSCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACGGCAGCCAGACCTATaGTCGGTGCTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQRQPDL*SVLSGA
Trigger: AGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCATCTCTGCGGAGGCTaGAGTCCACCTGGGGGCGGA +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEHLCGG*SPPGGG
Trigger: TCCGCCCCCAGGTGGACTCCAGCCTCCGCAGAGATG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGAAGCTGTGGGGGCATaGCAGTCAGGTTGGGTGTCG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQEAVGA*QSGWVS
Trigger: CGACACCCAACCTGACTGCCATGCCCCCACAGCTTC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGRSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAGGTCCAGGAAGCTGTaGGGGCATGGCAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRSRKL*GHGSQV
Trigger: AACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGCTGCCCTCGGGCCATaGCCTTGCGGAGCACACCCA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMAALGP*PCGAHP
Trigger: TGGGTGTGCTCCGCAAGGCCATGGCCCGAGGGCAGC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGTCCGGAGTCAACTCCTaGGAGGGCGGGGTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMSGVNS*EGGVVG
Trigger: CCCCACGACCCCGCCCTCCCAGGAGTTGACTCCGGA...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGGCTCATCATCACAGTaGCCTCCAGAAGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLGSSSQ*PPEGGE
Trigger: CTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAGGCTACGTCTCCATGATCCAAGAGGAACCGGCTGATCTGCTCAGTCACATCGGGATCTCTGAGTTCTaGGGCTGGGCCTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KGYVSMIQEEPADLLSHIGISEF*GWASGR
Trigger: TCTGCCAGAGGCCCAGCCCCAGAACTCAGAGATCCC...GATGTGACTGAGCAGATCAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCCCCCAGGCGCTCACTaGGCTTGTCCTCTAGGCCTG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMPPGAH*ACPLGL
Trigger: CAGGCCTAGAGGACAAGCTCAGTGAGCGCCTGGGGG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR TCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEDPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSDPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR TCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGGGCTCTCTGGGGCTTaGGGGCAGCCCACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMGLSGA*GQPTLC
Trigger: ACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGGAAGGCGTGAGAACTaGGGGACCTGCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMGRREN*GTCLRP
Trigger: GGGCCTCAGGCAGGTCCCTCAGTTCTCACGCCTTCC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAACGACCTCTTGGAAATaGAGCCTGTCCTGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQTTSWK*SLSWAP
Trigger: AGGCGCCCAGGACAGGCTGCATTTCCAAGAGGTCGT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGTGCGCAGTGAAGTCTaGCCAACGCCACGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQVRSEV*PTPRRG
Trigger: TCCTCTTCGTGGCGTTGGGCAGACTTCACTGCGCAC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCCTGGCACGAAGCCTCTaGCCCCAAACGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGLARSL*PQTKKQ
Trigger: TTGCTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAG...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCTGGCACGAAGCCTCTaGCCCCAAACGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLLARSL*PQTKKQ
Trigger: TTGCTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGCCCCTTCTGCCAGGTaGAGCAGCTGCAGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMAPSAR*SSCSCP
Trigger: TGGGCAGCTGCAGCTGCTGCACCTGGCAGAAGGGGC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341690.10
CDS-3UTR GCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTCTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSLQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSELQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAGCTTTCAGGCGCTCCTaGAGCCGCCACTGGATCTTA +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTAFRRS*SRHWIL
Trigger: TAAGATCCAGTGGCGGCTGCAGGAGCGCCTGAAAGC...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGAGCCCAGGTCTCTCTaGAGCAGGAGCTGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMEPRSL*SRSCPR
Trigger: CCGAGGGCAGCTCCTGCTGCAGAGAGACCTGGGCTC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp ATGAGGGGCTCTCTGGGGCTTGAGGGCAGCCCACCTTGTGTCCTCAGAAGCCCAAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: MRGSLGLEGSPPCVLRSPNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...TGGGCTTCTGAGGACACAAGGTGGGCTGCCCTCAAGCCCCAGAGAGCCCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGATGACCGTGACCCTCTaGTCAGAGGGCACTATCGAC +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEMTVTL*SEGTID
Trigger: GTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCAT...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QTSTRHSGSQSGRPAEFLTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...GAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCAAGCCCAGGGACACTTaGCCCCAGGGCTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAKPRDT*PQGWCP
Trigger: TGGACACCAGCCCTGGGGGCAAGTGTCCCTGGGCTT...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPACRTGP*SWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCA...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACAGAGCATCAGCAGGTaGCCACTCAGGGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQQSISR*PLRAMR
Trigger: CCTCATAGCCCTGAGTGGCCACCTGCTGATGCTCTG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSESGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTCTGGGGTGGTAGCTTaGCCATGTAGTCACGGAGCA +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSSGVVA*PCSHGA
Trigger: TGCTCCGTGACTACATGGCCAAGCTACCACCCCAGA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCCTGGGGTGTCCCTCTaGGGTGGTAGCTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEPGVSL*GGSLAM
Trigger: CATGGCCAAGCTACCACCCCAGAGGGACACCCCAGG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGAGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
3UTR CAA 72 bp AGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACGACCTCTTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SWMRPGFPRNWG*SPGVRTTSWKC
Trigger: GCATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTKATSP*SKRNRL
Trigger: CAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTT...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGATCCACATGGCCACTaGGCGAAAAGCTGCTGGACA +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQDPHGH*AKSCWT
Trigger: TGTCCAGCAGCTTTTCGCTCAGTGGCCATGTGGATC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCTTCTTCCGGAGGGGCTaGGAGCTAGAGAGGACGGGT +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAFFRRG*ELERTG
Trigger: ACCCGTCCTCTCTAGCTCTCAGCCCCTCCGGAAGAA...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGCCTGCCTTGCGGGATaGTCTTCAGGCGAATATACA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSACLAG*SSGEYT
Trigger: TGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCAGAATTCCCCCAAACTaGCATGACCGTGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGRIPPN*HDRDPL
Trigger: CAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCAGGTCCTTGGTCACATaGAGTGCCCCATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIRSLVT*SAPFSE
Trigger: CTCAGAGAATGGGGCACTGCATGTGACCAAGGACCT...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCTCGTGCAGCAGCTCTaGCAAGTGGCTCGCCACCGA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMLVQQL*QVARHR
Trigger: TCGGTGGCGAGCCACTTGGCAGAGCTGCTGCACGAG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAGCACCAGCTCCTCGTaGAGCAGCTCTGCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSESTSSS*SSSAKW
Trigger: CCACTTGGCAGAGCTGCTGCACGAGGAGCTGGTGCT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAASSLR*GHPRSA
Trigger: TGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGCACGAAGCCTCTaGCCCCAAACGAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLARSL*PQTKKQ
Trigger: TTGCTTTTTCGTTTGGGGGCAGAGGCTTCGTGCCAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACTCCAGCAGAGGAAATaGAGGGAGGGAGTCGATCCT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLQQRK*REGVDP
Trigger: AGGATCGACTCCCTCCCTGCATTTCCTCTGCTGGAG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGAGGCCCAGCATCTCTaGGGAGGCTGGAGTCCACCT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMEAQHL*GGWSPP
Trigger: AGGTGGACTCCAGCCTCCGCAGAGATGCTGGGCCTC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEVEPQL*HSGRVS
Trigger: GCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTAC...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSELVVVV*KMGLGV
Trigger: CACGCCGAGGCCCATTTTCCAGACGACCACGACGAG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGACCCCGGCCTCGTCGTaGTCGTCTGGAAAATGGGCC +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMTPASS*SSGKWA
Trigger: GGCCCATTTTCCAGACGACCACGACGAGGCCGGGGT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGACACGTTCCCCTTTCTaGCACGAAGCCTCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSETRSPF*HEASAP
Trigger: GGGGGCAGAGGCTTCGTGCCAGAAAGGGGAACGTGT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGTGCTGCCCAGCATCTaGCGGTGGGTGAAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMVLPSI*RWVKVG
Trigger: ACCCACCTTCACCCACCGCCAGATGCTGGGCAGCAC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSSEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTGGCCCCCATTCCACTaGACAGGAAGGCGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDWPPFH*TGRREN
Trigger: GTTCTCACGCCTTCCTGTCCAGTGGAATGGGGGCCA...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGCCTTACTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLALLSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567759.5
CDS-3UTR TCA 90 bp GCGAAAAGCTGCTGGACAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: AKSCWTGGSQGPCRFAAAFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...GGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTGTCCAGCAGCTTTTCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGGTCCCTGGAGCTGGATaGGTCCAGGTTTCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEVPGAG*VQVSQG
Trigger: TCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGAC...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LQIAWLIITVASRRWRALCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCATTTGGGGCTGGAGTaGCCCAGGTACTGGGTAAGC +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEHLGLE*PRYWVS
Trigger: GCTTACCCAGTACCTGGGGCACTCCAGCCCCAAATG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGACCTCCAGCCTGCCTTaGGGGATGATCTTCAGGCGA +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSETSSLP*GMIFRR
Trigger: TCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCTCTGGCAGAGTCAGTaGGTCTCGCCAGCTGCACAT +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSELWQSQ*VSPAAH
Trigger: ATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGATGCTCGCCGGACCCTaGCACCACGAGGGAAATCTC +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMMLAGP*HHEGNL
Trigger: GAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCAT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAGTCAGAACGACCTCTTaGAAATGCAGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQVRTTS*KCSLSW
Trigger: CCAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGAC...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGACAGGTCCCTGGAGCTaGATGCGTCCAGGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSETGPWS*MRPGFP
Trigger: TGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAAGCAGAGTTTCTCCCTaGACGGTGCATGTCACCACT +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQSRVSP*TVHVTT
Trigger: AGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
CDS-3UTR CCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCTCCTGCAGCCGCCACTaGATCTTAGGCTCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPASCSRH*ILGSSR
Trigger: TCTGCTGGAGCCTAAGATCCAGTGGCGGCTGCAGGA...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCGGCAGCCAGACCTATaGTCGGTGCTTTCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMRQPDL*SVLSGA
Trigger: AGCGCCTGAAAGCACCGACCATAGGTCTGGCTGCCG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCTGTGGAAGGCACATCTaGTCCCAGAGGAAGGATGAG +
Preference number: 4 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFCGRHI*SQRKDE
Trigger: CTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACA...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGAGGAGCCAGCACTCCTaGCCCCCATTCCACTGGACA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMRSQHS*PPFHWT
Trigger: TGTCCAGTGGAATGGGGGCCAGGAGTGCTGGCTCCT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACAGGTCCTTGGTCACATaGAGTGCCCCATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDRSLVT*SAPFSE
Trigger: CTCAGAGAATGGGGCACTGCATGTGACCAAGGACCT...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHICRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCAGACCTATGGTCGGTaGTTTCAGGCGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMQTYGR*FQALLQ
Trigger: CTGCAGGAGCGCCTGAAAGCACCGACCATAGGTCTG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAACTTCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: QTSTRHSGSQSGRPAEFLNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...GAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGAAGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAACAGACCCGGGTCCCTaGAAAATCTCAAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTTDPGP*KISSEH
Trigger: ATGCTCACTTGAGATTTTGCAGGGACCCGGGTCTGT...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCCCACAGCAGGTCCTTaGTCACATGCAGTGCCCCAT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMPTAGP*SHAVPH
Trigger: ATGGGGCACTGCATGTGACCAAGGACCTGCTGTGGG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDGFPRN*GLSPGV
Trigger: GACCCCAGGTGACAATCCCCAATTCCTTGGGAAACC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGTGGCCTCCAGAAGGTaGCGAGCTCTGCTTCTCAAG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMVASRR*RALLLK
Trigger: CTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCAC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCTGGCTCCAAATTGCTTaGCTCATCATCACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFWLQIA*LIITVA
Trigger: GGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCA...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACCTGTCCCTTCAACTTaGCTCCAAATTGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQPVPST*LQIAWL
Trigger: GAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: APNCLAHHHSGLQKVASSESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGAGTCAGTGTATGATTaGGCTAGCTCCTGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLESVYD*ASSCLC
Trigger: ACACAAACAGGAGCTAGCCCAATCATACACTGACTC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCCGAGGAAGAGGGACTTaGTGCTTTAGACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGRGRGT*CFRHQN
Trigger: ATTTTGATGTCTAAAGCATCAAGTCCCTCTTCCTCG...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: LIITVASRRWRALLLKFQCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCTTTCTCCACCTGCATTaGCTGCAGAAGGGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAFLHLH*LQKGWL
Trigger: CAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAA...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: SGLQKVASSASQVSTVEGNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGTCTGAGGGATCCACATaGCCACTGAGCGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSESEGST*PLSEKL
Trigger: CAGCTTTTCGCTCAGTGGCCATGTGGATCCCTCAGA...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CAA 72 bp CCACGCGAGTCAGTGTATGATTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATTCCTTTCACCAGCCAA +
Preference number: 4 (lower is better)
Translates to: PRESVYDWASSC*CESHAIPFTSQ
Trigger: TTGGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCATACACTGACTCGCGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTCGAGGAAGAGGGACTTaGTGCTTTAGACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVRGRGT*CFRHQN
Trigger: ATTTTGATGTCTAAAGCATCAAGTCCCTCTTCCTCG...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTGCAGAAGGGTTGGCTaGCACTGTTTACCAAACTTC +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDCRRVG*HCLPNF
Trigger: GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCA...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLNLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: QIAWLIITVASRRWRALLTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCAGCCATCATCTCTCTaGATGAGCTCAGTGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEQPSSL*MSSVSG
Trigger: ACCTGACACTGAGCTCATGCAGAGAGATGATGGCTG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGTTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMLGIVT*GQNDLL
Trigger: CAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAA...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACGAGGAAGAGGGACTTaGTGCTTTAGACATCAAAAT +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTRGRGT*CFRHQN
Trigger: ATTTTGATGTCTAAAGCATCAAGTCCCTCTTCCTCG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCACATCTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PPEGGELCFSSFNCGRHIFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...GATGTGCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: LAHHHSGLQKVASSASQVFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACAACTACTGTATTTTGTTaGCCTGTCCCTTCAACTTGG +
Preference number: 4 (lower is better)
Translates to: RHLQPALRDDLQANIQNTTTVFC*PVPSTW
Trigger: CCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGT...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGGAAGGTGGCGAGCTCTaGTTCTCAAGTTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMEGGEL*FSSFNC
Trigger: ACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTC...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CCA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGCTCAAGTTTCAACTGTaGAAGGCACATCTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KTESSTAARETPRKRDLMLKFQL*KAHLVP
Trigger: TGGGACCAGATGTGCCTTCCACAGTTGAAACTTGAG...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR TCA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTTCACCAGCCAACCTaGAAAAAGACCTTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: HRKTESSTAARETPRKRDFHQPT*KKTFLL
Trigger: TAAGAGAAAGGTCTTTTTTCAGGTTGGCTGGTGAAA...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR GCA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGAACTTGGCTCCAAATTaGTTGGCTCATCATCACAGT +
Preference number: 4 (lower is better)
Translates to: YYVIRNQTDPGPCKISSENLAPN*LAHHHS
Trigger: ACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTT...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
3UTR CAA 72 bp AACTACTACTGTATTTTGTTGCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCTCATCATCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: NYYCILLPCPFN*APNCLAHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCCACCGACGTGCCCAGGATGGGGCCCCCGAGGATAGAGAAGCGGCGCTGTCGGGGAGAGGCCCAGGGGTaGCCGGCTCCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: ATDVPRMGPPRIEKRRCRGEAQG*PAPTAG
Trigger: ACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCC...CCGACAGCGCCGCTTCTCTATCCTCGGGGGCCCCATCCTGGGCACGTCGGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS CCA 90 bp AGGCCAGGGTCCCAGGGATGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCCTGGCACCAC +
Preference number: 5 (lower is better)
Translates to: RPGSQGCDPGLVVVV*KMGLGVMLAGPWHH
Trigger: GTGGTGCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACATCCCTGGGACCCTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000563428.5
CDS CCA 90 bp AGCCTGTGCTCGAGGCACGCCTACGAATGTCCCCGGGAGGGCGGGTaGAGGACAGACCTGCTTCCTCAGAGCCCCCGCCTCCTGCACAGC +
Preference number: 5 (lower is better)
Translates to: SLCSRHAYECPREGG*RTDLLPQSPRLLHS
Trigger: GCTGTGCAGGAGGCGGGGGCTCTGAGGAAGCAGGTCTGTCCTCCACCCGCCCTCCCGGGGACATTCGTAGGCGTGCCTCGAGCACAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS-3UTR CAA 90 bp AGGACGGGTGTGTGCTGCTGGGAGCGAGTGGCCCGGACGCTGGAGGCCTGGGAGGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RTGVCCWERVARTLEAWEGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...CTCCCAGGCCTCCAGCGTCCGGGCCACTCGCTCCCAGCAGCACACACCCGTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS CCA 90 bp AGTCAGTGCGTCTCGCCAGGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCCTGGCACCAC +
Preference number: 5 (lower is better)
Translates to: SQCVSPGDPGLVVVV*KMGLGVMLAGPWHH
Trigger: GTGGTGCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACCTGGCGAGACGCACTGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000564208.5
ENST00000570117.5
CDS-3UTR CAA 90 bp AAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KAAGQLGPALGPPGLSPGGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...CCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS GCA 90 bp GGCACGCCTACGAATGTCCCCGGGAGGGCGGGTGGAGGACAGACCTaGTTCCTCAGAGCCCCCGCCTCCTGCACAGCAGAAACTCTCCAG +
Preference number: 5 (lower is better)
Translates to: GTPTNVPGRAGGGQT*FLRAPASCTAETLQ
Trigger: CTGGAGAGTTTCTGCTGTGCAGGAGGCGGGGGCTCTGAGGAAGCAGGTCTGTCCTCCACCCGCCCTCCCGGGGACATTCGTAGGCGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS GCA 90 bp CAGTCTCCAGGCTACGCAGCACTGTCCCCCGTGGGCCCACTCACCTaGTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCGATACCGG +
Preference number: 5 (lower is better)
Translates to: QSPGYAALSPVGPLT*SVTSSTTRGRFRYR
Trigger: CCGGTATCGGAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGGTGAGTGGGCCCACGGGGGACAGTGCTGCGTAGCCTGGAGACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566183.1
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGGAGAGGCCCAGGGGTaGCCGGCTCCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQGEAQG*PAPTAG
Trigger: ACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS TCA 90 bp GGGGCTGGGCCTCTGGCAGAGTCAGTGCGTCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGTCGCTCAGACCAAGGGGGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: GAGPLAESVRLASCT*KRGQGRRSDQGGRS
Trigger: TGACCGGCCCCCTTGGTCTGAGCGACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAGGCCCAGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000537450.5
ENST00000562330.5
ENST00000564345.5
ENST00000564454.1
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS-3UTR CAA 90 bp CTGCCTGAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGAGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LPEAPTAEAQRSPASQHRGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...TCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTCAGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RSICRCSDGTPWAHASGVRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CAA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: VLGASSRVDQLPELGCPSRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS CCA 90 bp CAGGTCACTAAGCACAGTCTCCAGGCTACGCAGCACTGTCCCCCGTaGGCCCACTCACCTGCTCAGTCACATCCAGCACGACTCGGGGCC +
Preference number: 5 (lower is better)
Translates to: QVTKHSLQATQHCPP*AHSPAQSHPARLGA
Trigger: GGCCCCGAGTCGTGCTGGATGTGACTGAGCAGGTGAGTGGGCCCACGGGGGACAGTGCTGCGTAGCCTGGAGACTGTGCTTAGTGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566183.1
CDS-3UTR CAA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVSRTPA*ALGTGQ
Trigger: CTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACT...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp CCCAGGGACACCCCCAGGGCTGGTGTCCACCGAGGTCCTGGAGCAGCTTCTTCAAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PRDTPRAGVHRGPGAASSSRTPA*ALGTGQ
Trigger: CTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACT...TGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGGGAGAGGCCCAGGGGTaGCCGGCTCCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVGEAQG*PAPTAG
Trigger: ACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCC...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCCTCGGGCCATGGCCTaGCGGAGCACACCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGPRAMA*RSTPSR
Trigger: GCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS TCA 90 bp GTGACCCCGGCCTCGTCGTGGTCGTCTGGAAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGCACCACGAGGGAAATCTCAAGTAGA +
Preference number: 5 (lower is better)
Translates to: VTPASSWSSGKWASA*CSPDPGTTREISSR
Trigger: TCTACTTGAGATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000563428.5
ENST00000564208.5
ENST00000564345.5
ENST00000564454.1
ENST00000564774.5
ENST00000565279.5
ENST00000565544.1
ENST00000566732.6
ENST00000567759.5
ENST00000569505.5
ENST00000569609.5
ENST00000570117.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGGGAGAGGCCCAGGGGTaGCCGGCTCCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGGEAQG*PAPTAG
Trigger: ACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCC...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAACCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CCCAGGGACACCCCCAGGGCTGGTGTCCACCGAGGTCCTGGAGCAGCTTCTTCACCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: PRDTPRAGVHRGPGAASSPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...TGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGTGTCCCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569505.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCTCGGGCCATGGCCTaGCGGAGCACACCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPRAMA*RSTPSR
Trigger: GCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS GCA 90 bp GAGGTCAGGGACGTCGCTCAGACCAAGGGGGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGGGAAGTCCATCCTGGAAACAAGGAC +
Preference number: 5 (lower is better)
Translates to: EVRDVAQTKGAGQKQ*RAEGAGEVHPGNKD
Trigger: GTCCTTGTTTCCAGGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTCCCTGACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000562330.5
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS CCA 90 bp TCCTGGAAACAAGGACCAAGCACCACACTGGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCCAGAGTTCGTGACCCCGGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: SWKQGPSTTLATSRD*KLVRGARVRDPGLV
Trigger: GACGAGGCCGGGGTCACGAACTCTGGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTCCTTGTTTCCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQSRTPA*ALGTGQ
Trigger: CTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACT...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
CDS-3UTR CAA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAGAGGCCCAGGGGTaGCCGGCTCCCACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLGEAQG*PAPTAG
Trigger: ACCTGCTGTGGGAGCCGGCAACCCCTGGGCCTCTCC...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCCCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AGGTCCAGGAAGCTGTGGGGGCATGGCAGTCAGGTTGGGTGTCGCCAGGAGGCCGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RSRKLWGHGSQVGCRQEAGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...GGCCTCCTGGCGACACCCAACCTGACTGCCATGCCCCCACAGCTTCCTGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp GAGGCCCCCACAGCTGAGGCGCAGCGGAGCCCTGCCTCCCAGCACAGACTAAAAGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EAPTAEAQRSPASQHRLKGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...TTTTAGTCTGTGCTGGGAGGCAGGGCTCCGCTGCGCCTCAGCTGTGGGGGCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CGGAGCATCTGCCGCTGCTCTGATGGGACGCCCTGGGCGCATGCATCCGGAGTCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: RSICRCSDGTPWAHASGVRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...GACTCCGGATGCATGCGCCCAGGGCGTCCCATCAGAGCAGCGGCAGATGCTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CAA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCTCGGGCCATGGCCTaGCGGAGCACACCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPRAMA*RSTPSR
Trigger: GCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CAA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGACACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp AGGAACCGGCTGATCTGCTCAGTCACATCCAGCACGACTCGGGGCCGCTTCCGACCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: RNRLICSVTSSTTRGRFRPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...TCGGAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGATCAGCCGGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569609.5
CDS-3UTR CAA 90 bp AGCATCTTCACTCCGGTGCGGTCACCCACGGTCAGCACCCGAGGGTGCGCAGTGAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SIFTPVRSPTVSTRGCAVRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...CACTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp AGAAGACATCTCCCGCCGCCGAGAGCTGGAAGAGCACCAGGCCTGGTGTGGGCGTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: RRHLPPPRAGRAPGLVWALPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...CGCCCACACCAGGCCTGGTGCTCTTCCAGCTCTCGGCGGCGGGAGATGTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp AAAGCTGCTGGACAGCTGGGTCCGGCGCTTGGGCCGCCTGGTCTGTCTCCCGGGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: KAAGQLGPALGPPGLSPGQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CCCGGGAGACAGACCAGGCGGCCCAAGCGCCGGACCCAGCTGTCCAGCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563428.5
CDS-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS TCA 90 bp CTCCCATCAGCCTCCACGTGCCTCTCAGACTTCACCTGCCAGCCCTaGACAGGTGCCGCTTCCTTCACCAATTCTGACCGACAGTCCGGT +
Preference number: 5 (lower is better)
Translates to: LPSASTCLSDFTCQP*TGAASFTNSDRQSG
Trigger: ACCGGACTGTCGGTCAGAATTGGTGAAGGAAGCGGCACCTGTTCAGGGCTGGCAGGTGAAGTCTGAGAGGCACGTGGAGGCTGATGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS CCA 90 bp AAGGGTCGCGACATGCTCAACAGGGCGGAGTTCAGTTCGTTAGGGTaGGGGGTTTCACAGGAAGCGGCGATACCCATCCTCAGGGCTCCA +
Preference number: 5 (lower is better)
Translates to: KGRDMLNRAEFSSLG*GVSQEAAIPILRAP
Trigger: TGGAGCCCTGAGGATGGGTATCGCCGCTTCCTGTGAAACCCCCCACCCTAACGAACTGAACTCCGCCCTGTTGAGCATGTCGCGACCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537450.5
ENST00000544090.5
ENST00000564208.5
ENST00000564774.5
CDS CCA 90 bp CGGTCAGAAACAATGCAGGGCGGAGGGAGCTGGGGAAGTCCATCCTaGAAACAAGGACCAAGCACCACACTGGCCACCTCGAGAGACTGG +
Preference number: 5 (lower is better)
Translates to: RSETMQGGGSWGSPS*KQGPSTTLATSRDW
Trigger: CCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTCCTTGTTTCCAGGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000562330.5
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS CCA 90 bp TCTGGACCATGCCAAGAGCACCTCCTCTACCAGAGGCGAGCCCGCTaGAATCTCCTGTCTCGCAAGAAAGGATACGCAGCCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SGPCQEHLLYQRRAR*NLLSRKKGYAACPG
Trigger: CCCAGGACAGGCTGCGTATCCTTTCTTGCGAGACAGGAGATTCCAGCGGGCTCGCCTCTGGTAGAGGAGGTGCTCTTGGCATGGTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS CCA 90 bp AAGCCCAGGGACACTTGCCCCCAGGGCTGGTGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTGACCACTGTCTTCTTCTTAGTGCGG +
Preference number: 5 (lower is better)
Translates to: KPRDTCPQGWCPPRS*SSFFTLTTVFFLVR
Trigger: CCGCACTAAGAAGAAGACAGTGGTCAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGCAAGTGTCCCTGGGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp CAGCAGAGTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTGCCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: QQSFSLDGACHHLPDRSLPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...CAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAACTCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS GCA 90 bp GAGGTCAGGGACGTCGCTCAGACCAAGGGGGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGGGAAGTCCATCATTTACAGACTACA +
Preference number: 5 (lower is better)
Translates to: EVRDVAQTKGAGQKQ*RAEGAGEVHHLQTT
Trigger: TGTAGTCTGTAAATGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTCCCTGACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537450.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGSRTPA*ALGTGQ
Trigger: CTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000570117.5
CDS-3UTR CAA 90 bp GCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCATGTCCCAAGGGAGAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: AQRALSTAHRCQTHVPRERFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...CTCCCTTGGGACATGGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCCTCGGGCCATGGCCTaGCGGAGCACACCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEPRAMA*RSTPSR
Trigger: GCGGCTGGGTGTGCTCCGCAAGGCCATGGCCCGAGG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: LQIAWLIITVASRRWRALHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS TCA 90 bp ACTGTGGGATCCACTGCGTGTTTGGGCCACAGATTCATCCAGGGTTaGGTTTGGTTTGCTGGGTGGTTGTCTGGGCCCAGCAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: TVGSTACLGHRFIQG*VWFAGWLSGPSRAA
Trigger: AGCGGCTCTGCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAACACGCAGTGGATCCCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS CCA 90 bp CGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTaGGGATTGTCACCTGGGGTCAGAACGACCTCTTGGAAATCTGGG +
Preference number: 5 (lower is better)
Translates to: RTGPWSWMRPGFPRN*GLSPGVRTTSWKSG
Trigger: CCCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS CCA 90 bp CTTTCTCCCTGGACGGTGCATGTCACCACTTGCCGGACAGGTCCCTaGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCA +
Preference number: 5 (lower is better)
Translates to: LSPWTVHVTTCRTGP*SWMRPGFPRNWGLS
Trigger: TGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS-3UTR CAA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAG +
Preference number: 5 (lower is better)
Translates to: APNCLAHHHSGLQKVASSSRTPA*ALGTGQ
Trigger: CTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACT...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
CDS-3UTR CAA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp TCCACACGGCACAGTGGTAGTCAGAGCGGACGGCCAGCAGAGTTTCTCCCTGGATTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: STRHSGSQSGRPAEFLPGLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...TCCAGGGAGAAACTCTGCTGGCCGTCCGCTCTGACTACCACTGTGCCGTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CAA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: APNCLAHHHSGLQKVASSRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CAA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000567759.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAGGAGGGTCTCAGGGTCCCTGTAGATTTGCCGCAGCCCATCCTCAGGGCTCCATTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: QEGLRVPVDLPQPILRAPLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...TGGAGCCCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp GCGGAGCCCTGCCTCCCAGCACAGACTAAAATCCCAGCAACACAGGCCCACCGGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: AEPCLPAQTKIPATQAHRQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CCGGTGGGCCTGTGTTGCTGGGATTTTAGTCTGTGCTGGGAGGCAGGGCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GTCCTGGGCGCCTCCAGCAGGGTAGACCAGCTGCCCGAACTGGGGTGTCCTTCCAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: VLGASSRVDQLPELGCPSNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...GGAAGGACACCCCAGTTCGGGCAGCTGGTCTACCCTGCTGGAGGCGCCCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCACCTCCAGCCTGCCTaGCGGGATGATCTTCAGGCG +
Preference number: 5 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEHLQPA*RDDLQA
Trigger: CGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS GCA 90 bp TATATAAGGGCCTTACTTTCTCCCTGGACGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: YIRALLSPWTVHVTT*RTGPWSWMRPGFPR
Trigger: CCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGCCCTTATATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS-3UTR CAA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGLSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAGGCGCTCACTGAGCTaGTCCTCTAGGCCTGACTCG +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRRSLS*SSRPDS
Trigger: CGAGTCAGGCCTAGAGGACAAGCTCAGTGAGCGCCT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CATCAGCAGCTCTGCAGGGGCCTCACTCCACCCTCACCAAACACGAGGAGCCAGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: HQQLCRGLTPPSPNTRSQQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CTGGCTCCTCGTGTTTGGTGAGGGTGGAGTGAGGCCCCTGCAGAGCTGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAACTTGGCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCCCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: QLGSKLLGSSSQWPPEGGPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...GCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCCCGCTCCCTCCAGCTaGAAATTCTCCAGCATCAGC +
Preference number: 5 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEPAPSS*KFSSIS
Trigger: GCTGATGCTGGAGAATTTCAAGCTGGAGGGAGCGGG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: APNCLAHHHSGLQKVASSGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: LQIAWLIITVASRRWRALPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: HRKTESSTAARETPRKRDGACHH*PDRSLE
Trigger: CTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACC...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGGTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: FNCGRHIWSQRKDEGLSGLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...CCCAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLLSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAAAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LIITVASRRWRALLLKFQRVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGCCAGACCCAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: DRDPLLRGHYRQPTGARPNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...GGGTCTGGCACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS GCA 90 bp AGCAGCTTCTTCACACTGACCACTGTCTTCTTCTTAGTGCGGCTCTaGATGGAAAGGCCTTGTCAGGCTCACACACCCTCGAGTTCACCC +
Preference number: 5 (lower is better)
Translates to: SSFFTLTTVFFLVRL*MERPCQAHTPSSSP
Trigger: GGGTGAACTCGAGGGTGTGTGAGCCTGACAAGGCCTTTCCATGCAGAGCCGCACTAAGAAGAAGACAGTGGTCAGTGTGAAGAAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS-3UTR CAA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp AGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACTGTGGAAGGCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SGLQKVASSASQVSTVEGRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...GCCTTCCACAGTTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RHNREFPQTDMTVTLCSELSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GCTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: APNCLAHHHSGLQKVASSPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...AGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAACCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: LIITVASRRWRALLLKFQPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563428.5
ENST00000566903.5
CDS-3UTR CAA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSRFPKE*GIVTWG
Trigger: ACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCT...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: LAHHHSGLQKVASSASQVLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS-3UTR CAA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACACTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: RHLQPALRDDLQANIQNTLSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCAGGGTCCCTGTAGATTaGCCGCAGCCCATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPARVPVD*PQPILR
Trigger: CCTGAGGATGGGCTGCGGCAAATCTACAGGGACCCT...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AGGCACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: RHNREFPQTDMTVTLCSEPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...CTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCCACACGGCACACCCTGTCCCTTCAACTaGGCTCCAAATTGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: HCLQKGWLPLFTKLPHGTPCPFN*APNCLA
Trigger: AGCCAAGCAATTTGGAGCCAAGTTGAAGGGACAGGG...TGTGCCGTGTGGAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp CTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTCAATTGCCTGCAGAAGGGTaGGCTGCCACTGTTTACCAA +
Preference number: 5 (lower is better)
Translates to: LIITVASRRWRALLLKFQLPAEG*AATVYQ
Trigger: TTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAA...TTGAAACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: QVSTVEGTSGPRGRMRGSLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...AGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CTCCAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: LQIAWLIITVASRRWRALQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000563428.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGTACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 5 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp ACTGACATGACCGTGACCCTCTGCTCAGAGGGCACTATCGACAGCCCACAGGTGAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: TDMTVTLCSEGTIDSPQVNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...CACCTGTGGGCTGTCGATAGTGCCCTCTGAGCAGAGGGTCACGGTCATGTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS TCA 90 bp GTCAACAACTGTGAAAATCCTAGAGCAGTGAAGTGTGTGAGAAAATaGGGCAGCCAGAGTGAGCGAGGTGGAGAGCGGTGGAGATGGAGT +
Preference number: 5 (lower is better)
Translates to: VNNCENPRAVKCVRK*GSQSERGGERWRWS
Trigger: ACTCCATCTCCACCGCTCTCCACCTCGCTCACTCTGGCTGCCTCATTTTCTCACACACTTCACTGCTCTAGGATTTTCACAGTTGTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565544.1
CDS CCA 90 bp TTCCCAAGGAATTGGGGATTGTCACCTGGGGTCAGAACGACCTCTTaGAAATCTGGGCCTCTCACTAAGGATCAGTGCACGAGCTATGAT +
Preference number: 5 (lower is better)
Translates to: FPRNWGLSPGVRTTS*KSGPLTKDQCTSYD
Trigger: ATCATAGCTCGTGCACTGATCCTTAGTGAGAGGCCCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS-3UTR CAA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCGGTCAGAACGACCTCTaGGAAATGCAGCCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPAGQNDL*EMQPVL
Trigger: CAGGACAGGCTGCATTTCCAAGAGGTCGTTCTGACC...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACG +
Preference number: 5 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEPRNWG*SPGVRT
Trigger: CGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp ATGATTGGGCTAGCTCCTGTTTGTGTGAGTCACATGCAATTCCTTTCACCAGCCCTTTCTCCACCTGCATaGCCTGCAGAAGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: MIGLAPVCVSHMQFLSPALSPPA*PAEGLA
Trigger: AGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAAAG...GGCTGGTGAAAGGAATTGCATGTGACTCACACAAACAGGAGCTAGCCCAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CAAATTGCTTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 5 (lower is better)
Translates to: QIAWLIITVASRRWRALLWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...AAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAAGCAATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 5 (lower is better)
Translates to: LAHHHSGLQKVASSASQVWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AGTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 5 (lower is better)
Translates to: SFNCGRHIWSQRKDEGLSWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...AGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CACAGGAAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGGCTCCAAATTGCTaGGCTCATCATCACAGTGGC +
Preference number: 5 (lower is better)
Translates to: HRKTESSTAARETPRKRDLAPNC*AHHHSG
Trigger: GCCACTGTGATGATGAGCCAAGCAATTTGGAGCCAA...GTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTTCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CACAACAGAGAATTCCCCCAAACTGACATGACCGTGACCCTCTGCTCAGAGGGCTACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 5 (lower is better)
Translates to: HNREFPQTDMTVTLCSEGYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...GCCCTCTGAGCAGAGGGTCACGGTCATGTCAGTTTGGGGGAATTCTCTGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp GTTTCAACTGTGGAAGGCACATCTGGTCCCAGAGGAAGGATGAGGGGCTCTCTGTACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 5 (lower is better)
Translates to: VSTVEGTSGPRGRMRGSLYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...CAGAGAGCCCCTCATCCTTCCTCTGGGACCAGATGTGCCTTCCACAGTTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTCTCCACCTGCATTGCCTGCAGAAGGGTTGGCTGCCACTGTTTACCAAACTTCTGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 5 (lower is better)
Translates to: FSTCIACRRVGCHCLPNFWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...GAAGTTTGGTAAACAGTGGCAGCCAACCCTTCTGCAGGCAATGCAGGTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS-3UTR CAA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATGGGCTAGCTCCTGTTaGTGTGAGTCACATGCAATT +
Preference number: 5 (lower is better)
Translates to: RHLQPALRDDLQANIQNTWASSC*CESHAI
Trigger: AATTGCATGTGACTCACACAAACAGGAGCTAGCCCA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TTGGCTCATCATCACAGTGGCCTCCAGAAGGTGGCGAGCTCTGCTTCTCAAGTTAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: LAHHHSGLQKVASSASQVNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...AACTTGAGAAGCAGAGCTCGCCACCTTCTGGAGGCCACTGTGATGATGAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp TACTATGTCATCAGAAACCAGACAGACCCGGGTCCCTGCAAAATCTCAAGTGAGCAACTTGGCTCCAAATaGCTTGGCTCATCATCACAG +
Preference number: 5 (lower is better)
Translates to: YYVIRNQTDPGPCKISSEQLGSK*LGSSSQ
Trigger: CTGTGATGATGAGCCAAGCAATTTGGAGCCAAGTTG...CTCACTTGAGATTTTGCAGGGACCCGGGTCTGTCTGGTTTCTGATGACATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp CGGCACCTCCAGCCTGCCTTGCGGGATGATCTTCAGGCGAATATACAAAATACATACTACTGTATTTTGTaGCCCTGTCCCTTCAACTTG +
Preference number: 5 (lower is better)
Translates to: RHLQPALRDDLQANIQNTYYCIL*PCPFNL
Trigger: CAAGTTGAAGGGACAGGGCAACAAAATACAGTAGTA...TGTATTTTGTATATTCGCCTGAAGATCATCCCGCAAGGCAGGCTGGAGGTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS-3UTR CAA 90 bp AAAACAGAATCTTCCACTGCAGCTAGAGAAACTCCGAGGAAGAGGGACTTGATGAACTACTACTGTATTTaGTTGCCCTGTCCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: KTESSTAARETPRKRDLMNYYCI*LPCPFN
Trigger: GTTGAAGGGACAGGGCAACAAAATACAGTAGTAGTT...CATCAAGTCCCTCTTCCTCGGAGTTTCTCTAGCTGCAGTGGAAGATTCTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
CDS GCA 72 bp GGGACGACGGCAGCCAGACCTGCCAGGTGCAGCAGCTaGAGCTGCCCACCCTGGCCTCCGAGGAGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: GTTAARPARCSS*SCPPWPPRSRG
Trigger: GCCCCTGCTCCTCGGAGGCCAGGGTGGGCAGCTGCAGCTGCTGCACCTGGCAGGTCTGGCTGCCGTCGTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568265.1
CDS CCA 72 bp GTCTCGCCAGGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCC +
Preference number: 6 (lower is better)
Translates to: VSPGDPGLVVVV*KMGLGVMLAGP
Trigger: GGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACCTGGCGAGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341690.10
ENST00000564208.5
ENST00000570117.5
CDS CCA 72 bp TCGAGGCACGCCTACGAATGTCCCCGGGAGGGCGGGTaGAGGACAGACCTGCTTCCTCAGAGCCCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: SRHAYECPREGG*RTDLLPQSPRL
Trigger: GAGGCGGGGGCTCTGAGGAAGCAGGTCTGTCCTCCACCCGCCCTCCCGGGGACATTCGTAGGCGTGCCTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS TCA 72 bp GCAGTCGGGGTGGGTCCTCTGCCGCCAGCCCGTACCTaGGTGTCCAGCATCTTCACTCCGGTGCGGTCACCC +
Preference number: 6 (lower is better)
Translates to: AVGVGPLPPART*VSSIFTPVRSP
Trigger: GGGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGTACGGGCTGGCGGCAGAGGACCCACCCCGACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562445.5
CDS GCA 72 bp GTGTCCTTCCAGGAACCCAGGCCAGCGCGCCCCCAGTaGAGGCCTCATCCAGAAGCAGCTGCTCCCACCGCA +
Preference number: 6 (lower is better)
Translates to: VSFQEPRPARPQ*RPHPEAAAPTA
Trigger: TGCGGTGGGAGCAGCTGCTTCTGGATGAGGCCTGCACTGGGGGCGCGCTGGCCTGGGTTCCTGGAAGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000341690.10
ENST00000537450.5
ENST00000541676.5
ENST00000544090.5
ENST00000562330.5
ENST00000563428.5
ENST00000564208.5
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000570117.5
CDS GCA 72 bp GGCTACGCAGCACTGTCCCCCGTGGGCCCACTCACCTaGTCAGTCACATCCAGCACGACTCGGGGCCGCTTC +
Preference number: 6 (lower is better)
Translates to: GYAALSPVGPLT*SVTSSTTRGRF
Trigger: GAAGCGGCCCCGAGTCGTGCTGGATGTGACTGAGCAGGTGAGTGGGCCCACGGGGGACAGTGCTGCGTAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566183.1
CDS CCA 72 bp TCCCAGGGATGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCC +
Preference number: 6 (lower is better)
Translates to: SQGCDPGLVVVV*KMGLGVMLAGP
Trigger: GGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACATCCCTGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000563428.5
CDS CCA 72 bp GCCAGAGTTCGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCC +
Preference number: 6 (lower is better)
Translates to: ARVRDPGLVVVV*KMGLGVMLAGP
Trigger: GGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACGAACTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS GCA 72 bp CAGCCCGTACCTGAGTGTCCAGCATCTTCACTCCGGTaGGGTCACCCACGGTCAGCACCCGAGGGTGCGCAG +
Preference number: 6 (lower is better)
Translates to: QPVPECPASSLR*GHPRSAPEGAQ
Trigger: CTGCGCACCCTCGGGTGCTGACCGTGGGTGACCGCACCGGAGTGAAGATGCTGGACACTCAGGTACGGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562445.5
CDS CCA 72 bp GAAGTCCATCGTGACCCCGGCCTCGTCGTGGTCGTCTaGAAAATGGGCCTCGGCGTGATGCTCGCCGGACCC +
Preference number: 6 (lower is better)
Translates to: EVHRDPGLVVVV*KMGLGVMLAGP
Trigger: GGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGCCGGGGTCACGATGGACTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564345.5
ENST00000564454.1
CDS TCA 72 bp GCCTCGTCGTGGTCGTCTGGAAAATGGGCCTCGGCGTaGTGCTCGCCGGACCCTGGCACCACGAGGGAAATC +
Preference number: 6 (lower is better)
Translates to: ASSWSSGKWASA*CSPDPGTTREI
Trigger: GATTTCCCTCGTGGTGCCAGGGTCCGGCGAGCATCACGCCGAGGCCCATTTTCCAGACGACCACGACGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000341690.10
ENST00000537450.5
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000563428.5
ENST00000564208.5
ENST00000564345.5
ENST00000564454.1
ENST00000564774.5
ENST00000565279.5
ENST00000565544.1
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569505.5
ENST00000569609.5
ENST00000570117.5
CDS CAA 90 bp CGAAGAGGAGTCCCGGAACACGAGGGTCTCAGGGTCCCTGTAGATTaGCCGCAGCCTTGGGGAGACAGGCAAGCCGTGGGCAGGGGGACA +
Preference number: 6 (lower is better)
Translates to: RRGVPEHEGLRVPVD*PQPWGDRQAVGRGT
Trigger: TGTCCCCCTGCCCACGGCTTGCCTGTCTCCCCAAGGCTGCGGCAAATCTACAGGGACCCTGAGACCCTCGTGTTCCGGGACTCCTCTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000544090.5
ENST00000564208.5
ENST00000564774.5
CDS GCA 72 bp GACGTCGCTCAGACCAAGGGGGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGGGAAGTCCATCCTGGA +
Preference number: 6 (lower is better)
Translates to: DVAQTKGAGQKQ*RAEGAGEVHPG
Trigger: TCCAGGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000562330.5
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS GCA 72 bp GACGTCGCTCAGACCAAGGGGGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGGGAAGTCCATCGTGAC +
Preference number: 6 (lower is better)
Translates to: DVAQTKGAGQKQ*RAEGAGEVHRD
Trigger: GTCACGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000564345.5
ENST00000564454.1
CDS CCA 72 bp GCACCACGAGGGAAATCTCAAGTAGAACCCCAGCTTTaGCACTCGGGACGGGTCAGCCCCGCCGCAGCTACC +
Preference number: 6 (lower is better)
Translates to: APRGKSQVEPQL*HSGRVSPAAAT
Trigger: GGTAGCTGCGGCGGGGCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACTTGAGATTTCCCTCGTGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000564208.5
ENST00000564345.5
ENST00000564454.1
ENST00000565279.5
ENST00000565544.1
ENST00000566732.6
ENST00000569609.5
ENST00000570117.5
CDS CCA 72 bp GGCAGCCAGAGTGAGCGAGGTGGAGAGCGGTGGAGATaGAGTCAGAAAGACGGCAAGGGGCAGCCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: GSQSERGGERWR*SQKDGKGQPLS
Trigger: GGAGAGAGGCTGCCCCTTGCCGTCTTTCTGACTCCATCTCCACCGCTCTCCACCTCGCTCACTCTGGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565544.1
CDS CAA 72 bp GGCACCACGAGGGAAATCTCAAGTAGAACCCCAGCTTaGGCACTCGGGACGGGTCAGCCCCGCCGCAGCTAC +
Preference number: 6 (lower is better)
Translates to: GTTREISSRTPA*ALGTGQPRRSY
Trigger: GTAGCTGCGGCGGGGCTGACCCGTCCCGAGTGCCAAAGCTGGGGTTCTACTTGAGATTTCCCTCGTGGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000341690.10
ENST00000541676.5
ENST00000544090.5
ENST00000561955.1
ENST00000564208.5
ENST00000564345.5
ENST00000564454.1
ENST00000565279.5
ENST00000565544.1
ENST00000566732.6
ENST00000569609.5
ENST00000570117.5
CDS CCA 72 bp CAAGGACCAAGCACCACACTGGCCACCTCGAGAGACTaGAAGCTGGTAAGGGGCGCCAGAGTTCGTGACCCC +
Preference number: 6 (lower is better)
Translates to: QGPSTTLATSRD*KLVRGARVRDP
Trigger: GGGGTCACGAACTCTGGCGCCCCTTACCAGCTTCCAGTCTCTCGAGGTGGCCAGTGTGGTGCTTGGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS CAA 72 bp GGCCTTACTTTCTCCCTGGACGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: GLTFSLDGACHH*PDRSLELDASR
Trigger: CCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS CAA 72 bp TGGGAAAGGGGTGCTCAGAAGAGGTGTGGGGGAGCCTaGCCAGCAGAAACCTGCCTGGCCTTCTCGCAGCCA +
Preference number: 6 (lower is better)
Translates to: WERGAQKRCGGA*PAETCLAFSQP
Trigger: TGGCTGCGAGAAGGCCAGGCAGGTTTCTGCTGGCAAGGCTCCCCCACACCTCTTCTGAGCACCCCTTTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS TCA 72 bp CCTCTGGCAGAGTCAGTGCGTCTCGCCAGCTGCACATaGAAGAGAGGTCAGGGACGTCGCTCAGACCAAGGG +
Preference number: 6 (lower is better)
Translates to: PLAESVRLASCT*KRGQGRRSDQG
Trigger: CCCTTGGTCTGAGCGACGTCCCTGACCTCTCTTTCATGTGCAGCTGGCGAGACGCACTGACTCTGCCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000537450.5
ENST00000562330.5
ENST00000564345.5
ENST00000564454.1
ENST00000564774.5
ENST00000565279.5
ENST00000566732.6
ENST00000566903.5
ENST00000567759.5
ENST00000569609.5
CDS GCA 72 bp GCCTTACTTTCTCCCTGGACGGTGCATGTCACCACTTaGCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: ALLSPWTVHVTT*RTGPWSWMRPG
Trigger: ACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS CAA 72 bp CCATCTGAGACAGAGCAGAGGTGGGGCGGGGCGGTGTaGTGTGCCACTCACCTGGGTACAGACGAGATGAAG +
Preference number: 6 (lower is better)
Translates to: PSETEQRWGGAV*CATHLGTDEMK
Trigger: CTTCATCTCGTCTGTACCCAGGTGAGTGGCACACAACACCGCCCCGCCCCACCTCTGCTCTGTCTCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS TCA 72 bp GCCTCCACGTGCCTCTCAGACTTCACCTGCCAGCCCTaGACAGGTGCCGCTTCCTTCACCAATTCTGACCGA +
Preference number: 6 (lower is better)
Translates to: ASTCLSDFTCQP*TGAASFTNSDR
Trigger: TCGGTCAGAATTGGTGAAGGAAGCGGCACCTGTTCAGGGCTGGCAGGTGAAGTCTGAGAGGCACGTGGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS GCA 72 bp GACGTCGCTCAGACCAAGGGGGCCGGTCAGAAACAATaGAGGGCGGAGGGAGCTGGGGAAGTCCATCATTTA +
Preference number: 6 (lower is better)
Translates to: DVAQTKGAGQKQ*RAEGAGEVHHL
Trigger: TAAATGATGGACTTCCCCAGCTCCCTCCGCCCTGCATTGTTTCTGACCGGCCCCCTTGGTCTGAGCGACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537450.5
CDS CCA 72 bp TGCCAAGAGCACCTCCTCTACCAGAGGCGAGCCCGCTaGAATCTCCTGTCTCGCAAGAAAGGATACGCAGCC +
Preference number: 6 (lower is better)
Translates to: CQEHLLYQRRAR*NLLSRKKGYAA
Trigger: GGCTGCGTATCCTTTCTTGCGAGACAGGAGATTCCAGCGGGCTCGCCTCTGGTAGAGGAGGTGCTCTTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS CCA 72 bp GACACTTGCCCCCAGGGCTGGTGTCCACCGAGGTCCTaGAGCAGCTTCTTCACACTGACCACTGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: DTCPQGWCPPRS*SSFFTLTTVFF
Trigger: GAAGAAGACAGTGGTCAGTGTGAAGAAGCTGCTCCAGGACCTCGGTGGACACCAGCCCTGGGGGCAAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566903.5
CDS CAA 90 bp CCACTGCGTGTTTGGGCCACAGATTCATCCAGGGTTGAGTTTGGTTaGCTGGGTGGTTGTCTGGGCCCAGCAGAGCCGCTGGTAAGCAGC +
Preference number: 6 (lower is better)
Translates to: PLRVWATDSSRVEFG*LGGCLGPAEPLVSS
Trigger: GCTGCTTACCAGCGGCTCTGCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAACACGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS CAA 90 bp GGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACGACCTCTTGGAAATCTGGGCCTCTC +
Preference number: 6 (lower is better)
Translates to: GPWSWMRPGFPRNWG*SPGVRTTSWKSGPL
Trigger: GAGAGGCCCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS CAA 90 bp CCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAGGAATaGGGGATTGTCACCTGGGGTCAGAACGACCTCTTGGAAATCTGG +
Preference number: 6 (lower is better)
Translates to: PDRSLELDASRFPKE*GIVTWGQNDLLEIW
Trigger: CCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS TCA 72 bp ATCAGCTTCCCCAGGGGCGCAAAGGCTACGTCTCCATaGTCCAAGAGGAACCGGCTGCTCAGTCACATCCAG +
Preference number: 6 (lower is better)
Translates to: ISFPRGAKATSP*SKRNRLLSHIQ
Trigger: CTGGATGTGACTGAGCAGCCGGTTCCTCTTGGATCATGGAGACGTAGCCTTTGCGCCCCTGGGGAAGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000544090.5
ENST00000561955.1
ENST00000562330.5
ENST00000569505.5
CDS TCA 72 bp CCAGCCCTGAACAGGTGCCGCTTCCTTCACCAATTCTaGCCGACAGTCCGGTGGACAGACAGAACAAGTGGG +
Preference number: 6 (lower is better)
Translates to: PALNRCRFLHQF*PTVRWTDRTSG
Trigger: CCCACTTGTTCTGTCTGTCCACCGGACTGTCGGTCAGAATTGGTGAAGGAAGCGGCACCTGTTCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS GCA 72 bp TTTGGGCCACAGATTCATCCAGGGTTGAGTTTGGTTTaGTGGGTGGTTGTCTGGGCCCAGCAGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: FGPQIHPGLSLV*WVVVWAQQSRW
Trigger: CCAGCGGCTCTGCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS GCA 72 bp CCCCACCTGCCTGTTAGCACCGACTGTGGGATCCACTaGGTGTTTGGGCCACAGATTCATCCAGGGTTGAGT +
Preference number: 6 (lower is better)
Translates to: PHLPVSTDCGIH*VFGPQIHPGLS
Trigger: ACTCAACCCTGGATGAATCTGTGGCCCAAACACGCAGTGGATCCCACAGTCGGTGCTAACAGGCAGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564774.5
CDS CCA 72 bp GACATGCTCAACAGGGCGGAGTTCAGTTCGTTAGGGTaGGGGGTTTCACAGGAAGCGGCGATACCCATCCTC +
Preference number: 6 (lower is better)
Translates to: DMLNRAEFSSLG*GVSQEAAIPIL
Trigger: GAGGATGGGTATCGCCGCTTCCTGTGAAACCCCCCACCCTAACGAACTGAACTCCGCCCTGTTGAGCATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537450.5
ENST00000544090.5
ENST00000564208.5
ENST00000564774.5
CDS CAA 72 bp GTTTGGGCCACAGATTCATCCAGGGTTGAGTTTGGTTaGCTGGGTGGTTGTCTGGGCCCAGCAGAGCCGCTG +
Preference number: 6 (lower is better)
Translates to: VWATDSSRVEFG*LGGCLGPAEPL
Trigger: CAGCGGCTCTGCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS CAA 90 bp GTATATAAGGGCCTTACTTTCTCCCTGGACGGTGCATGTCACCACTaGCCGGACAGGTCCCTGGAGCTGGATGCGTCCAGGTTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: VYKGLTFSLDGACHH*PDRSLELDASRFPK
Trigger: CTTGGGAAACCTGGACGCATCCAGCTCCAGGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGCCCTTATATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS TCA 72 bp TCCACTGCGTGTTTGGGCCACAGATTCATCCAGGGTTaGGTTTGGTTTGCTGGGTGGTTGTCTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: STACLGHRFIQG*VWFAGWLSGPS
Trigger: GCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAACACGCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS CAA 72 bp TGCGTGTTTGGGCCACAGATTCATCCAGGGTTGAGTTaGGTTTGCTGGGTGGTTGTCTGGGCCCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: CVFGPQIHPGLS*VCWVVVWAQQS
Trigger: GCTCTGCTGGGCCCAGACAACCACCCAGCAAACCAAACTCAACCCTGGATGAATCTGTGGCCCAAACACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544090.5
ENST00000564774.5
CDS CAA 90 bp ACTGACCACTGTCTTCTTCTTAGTGCGGCTCTGCATGGAAAGGCCTaGTCAGGCTCACACACCCTCGAGTTCACCCCTGAAGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: TDHCLLLSAALHGKA*SGSHTLEFTPEGQQ
Trigger: CTGCTGTCCTTCAGGGGTGAACTCGAGGGTGTGTGAGCCTGACAAGGCCTTTCCATGCAGAGCCGCACTAAGAAGAAGACAGTGGTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS CCA 72 bp GCGTCCAGGTTTCCCAAGGAATTGGGGATTGTCACCTaGGGTCAGAACGACCTCTTGGAAATCTGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: ASRFPKELGIVT*GQNDLLEIWAS
Trigger: AGAGGCCCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS CCA 72 bp GGGAGGAAAGTGTATATAAGGGCCTTACTTTCTCCCTaGACGGTGCATGTCACCACTTGCCGGACAGGTCCC +
Preference number: 6 (lower is better)
Translates to: GRKVYIRALLSP*TVHVTTCRTGP
Trigger: GGGACCTGTCCGGCAAGTGGTGACATGCACCGTCCAGGGAGAAAGTAAGGCCCTTATATACACTTTCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567759.5
ENST00000570270.1
CDS TCA 72 bp AGACGCTCAAGTTACTCCACAGCCAGGGACTGCATCTaGGCATCGTCTTCCTACTGTCAAGCACAGTGCCTC +
Preference number: 6 (lower is better)
Translates to: RRSSYSTARDCI*ASSSYCQAQCL
Trigger: GAGGCACTGTGCTTGACAGTAGGAAGACGATGCTCAGATGCAGTCCCTGGCTGTGGAGTAACTTGAGCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537450.5
ENST00000565544.1
CDS TCA 72 bp AGCAGTGAAGTGTGTGAGAAAATGAGGCAGCCAGAGTaGGCGAGGTGGAGAGCGGTGGAGATGGAGTCAGAA +
Preference number: 6 (lower is better)
Translates to: SSEVCEKMRQPE*ARWRAVEMESE
Trigger: TTCTGACTCCATCTCCACCGCTCTCCACCTCGCTCACTCTGGCTGCCTCATTTTCTCACACACTTCACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565544.1
CDS GCA 72 bp TTCACACTGACCACTGTCTTCTTCTTAGTGCGGCTCTaGATGGAAAGGCCTTGTCAGGCTCACACACCCTCG +
Preference number: 6 (lower is better)
Translates to: FTLTTVFFLVRL*MERPCQAHTPS
Trigger: CGAGGGTGTGTGAGCCTGACAAGGCCTTTCCATGCAGAGCCGCACTAAGAAGAAGACAGTGGTCAGTGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS CAA 72 bp TGTCTTCTTCTTAGTGCGGCTCTGCATGGAAAGGCCTaGTCAGGCTCACACACCCTCGAGTTCACCCCTGAA +
Preference number: 6 (lower is better)
Translates to: CLLLSAALHGKA*SGSHTLEFTPE
Trigger: TTCAGGGGTGAACTCGAGGGTGTGTGAGCCTGACAAGGCCTTTCCATGCAGAGCCGCACTAAGAAGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562330.5
CDS TCA 72 bp TGTGAAAATCCTAGAGCAGTGAAGTGTGTGAGAAAATaGGGCAGCCAGAGTGAGCGAGGTGGAGAGCGGTGG +
Preference number: 6 (lower is better)
Translates to: CENPRAVKCVRK*GSQSERGGERW
Trigger: CCACCGCTCTCCACCTCGCTCACTCTGGCTGCCTCATTTTCTCACACACTTCACTGCTCTAGGATTTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565544.1
CDS GCA 72 bp AGAGAGAGAACTGTTAGCACCGACTGTGGGATCCACTaGGTGTTTGGGCCACAGATTCATCCAGGGTTGAGT +
Preference number: 6 (lower is better)
Translates to: RERTVSTDCGIH*VFGPQIHPGLS
Trigger: ACTCAACCCTGGATGAATCTGTGGCCCAAACACGCAGTGGATCCCACAGTCGGTGCTAACAGTTCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544090.5
CDS CCA 72 bp AATTGGGGATTGTCACCTGGGGTCAGAACGACCTCTTaGAAATCTGGGCCTCTCACTAAGGATCAGTGCACG +
Preference number: 6 (lower is better)
Translates to: NWGLSPGVRTTS*KSGPLTKDQCT
Trigger: CGTGCACTGATCCTTAGTGAGAGGCCCAGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570270.1
CDS CAA 72 bp AGCTGGATGCGTCCAGGTTTCCCAAGGAATTGGGGATaGTCACCTGGGGTCAGAACGACCTCTTGGAAATCT +
Preference number: 6 (lower is better)
Translates to: SWMRPGFPRNWG*SPGVRTTSWKS
Trigger: AGATTTCCAAGAGGTCGTTCTGACCCCAGGTGACAATCCCCAATTCCTTGGGAAACCTGGACGCATCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570270.1