Pregenerated sensors for TAF1B (Homo sapiens)
Ensembl gene IDs: ENSG00000115750Ensembl transcript IDs: ENST00000263663.10, ENST00000402170.5, ENST00000404869.7, ENST00000416181.1, ENST00000434858.5, ENST00000469895.5, ENST00000480197.5, ENST00000490432.1, ENST00000492648.2, ENST00000497182.1, ENST00000625239.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTGGCAAGTTAAGCTATaGATTTCATCAGGGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: GLPEGCVHGNTFYQCPLQWQVKL*ISSGRL Trigger: CAACCTCCCTGATGAAATGCATAGCTTAACTTGCCA...CTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTTGGTTTGTCGACAAATaGGTAGTAGAGTGGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SGLPEGCVHGNTFYQCPLWFVDK*VVEWLF Trigger: GAAAAGCCACTCTACTACTCATTTGTCGACAAACCA...AAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| 3UTR-3UTR TCA 90 bp | AATAAGATCAGTGTTTGTAACTTCCTGATATCTATTCAAGTCCTGGTACTTGGGAACTCACTCAACTTCTaGGCCCTATCAATAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NKISVCNFLISIQVLVLGNSLNF*ALSIGS Trigger: AGAGCCTATTGATAGGGCTCAGAAGTTGAGTGAGTT...CCCAAGTACCAGGACTTGAATAGATATCAGGAAGTTACAAACACTGATCTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| 3UTR-3UTR GCA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTTATACTGTGGTATCCTaGATTGGATCATGGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: GIFILGEHSNYICCKVTFYTVVS*IGSWNR Trigger: TCTGTTCCATGATCCAATGCAGGATACCACAGTATA...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTTCCTGCATTGGATCATaGAACAGAAAGAGGACATTA | + |
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Preference number: 2 (lower is better) Translates to: GIFILGEHSNYICCKVTFSCIGS*NRKRTL Trigger: TAATGTCCTCTTTCTGTTCCATGATCCAATGCAGGA...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCTTTTCCACAGGTACTaGGCCCTTGCTTCTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: SGLPEGCVHGNTFYQCPLLFHRY*ALASSH Trigger: ATGGGAAGAAGCAAGGGCCAAGTACCTGTGGAAAAG...AAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| 3UTR TCA 72 bp | GTCAGCAGTGATTGGCCTTTCTCTTTCAGGACTCCCTaGAGGCTGTGTCCATGGAAACACGTTCTATCAGTG | + |
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Preference number: 3 (lower is better) Translates to: VSSDWPFSFRTP*RLCPWKHVLSV Trigger: CACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGAAAGAGAAAGGCCAATCACTGCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATCTGTGGTATCCTGCATaGGATCATGGAACAGAAAGA | + |
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Preference number: 3 (lower is better) Translates to: ERGRGRSIRNIGKSHANYLWYPA*DHGTER Trigger: TCTTTCTGTTCCATGATCCAATGCAGGATACCACAG...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| 3UTR CCA 72 bp | TATAAAAAGTATACTGTGGTATCCTGCATTGGATCATaGAACAGAAAGAGGACATTAATAAAAACACTGGTG | + |
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Preference number: 3 (lower is better) Translates to: YKKYTVVSCIGS*NRKRTLIKTLV Trigger: CACCAGTGTTTTTATTAATGTCCTCTTTCTGTTCCATGATCCAATGCAGGATACCACAGTATACTTTTTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR TCA 90 bp | TCAGGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: SGLPEGCVHGNTFYQCPLETAAH*VQRSLN Trigger: GTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTC...AAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | GCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCCAGTTGAACTGATCAGTAAGACCCCATaGGACAGCAGCACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: AVSMETRSISVLFSPVELISKTP*DSSTLS Trigger: ACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGAT...CAGTTCAACTGGACTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | TCAGGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTTTTCATCAGGGAGGTTaGCTTCCATCAAGTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: SGLPEGCVHGNTFYQCPLFHQGG*LPSSIS Trigger: TGAAATACTTGATGGAAGTCAACCTCCCTGATGAAA...AAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR GCA 90 bp | GCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCCAGTTGAACTGTGGGTTCTTACAATATaGCTGCTTGCTCTTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AVSMETRSISVLFSPVELWVLTI*LLALLK Trigger: CTTCAGAAGAGCAAGCAGGCATATTGTAAGAACCCA...CAGTTCAACTGGACTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CCA 90 bp | GGACTCCCTGAAGGCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCATACACAGTATGTTaGGATGAAGATAGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GLPEGCVHGNTFYQCPLQSYTVC*DEDSSL Trigger: AAGACTGCTATCTTCATCCCAACATACTGTGTATGA...CTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGCCTTCAGGGAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: LPDIYSSPGTWVTLANSLETAAH*VQRSLN Trigger: GTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTC...GAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR TCA 90 bp | AGCAGTTTCAATACCACCACAATGATAGCTACAGCTTGTACATCGTACTTAACAGTGTGGATGTCAGACTaGGACTCCGCTCCACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: SSFNTTTMIATACTSYLTVWMSD*DSAPLS Trigger: TGAAAGTGGAGCGGAGTCTCAGTCTGACATCCACAC...TGTTAAGTACGATGTACAAGCTGTAGCTATCATTGTGGTGGTATTGAAACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | GACCACTCGAAACTGTCATCCAATAGAAAGAGCAGTTTCAATACCACCACAATGATTGTGATGCTTTGCTaGCGGGGAAAGGTTTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: DHSKLSSNRKSSFNTTTMIVMLC*RGKVFE Trigger: CTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAAT...CATTGTGGTGGTATTGAAACTGCTCTTTCTATTGGATGACAGTTTCGAGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CCA 90 bp | GCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCCAGTTGAACTGTCCAGTGGTATAAACTaGGTTCTTACAATATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: AVSMETRSISVLFSPVELSSGIN*VLTICL Trigger: CAGGCATATTGTAAGAACCCAGTTTATACCACTGGA...CAGTTCAACTGGACTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCAACTCACTCAACTTCTaGGCCCTATCAATAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPDIYSSPGTWVTLANSLNSLNF*ALSIGS Trigger: AGAGCCTATTGATAGGGCTCAGAAGTTGAGTGAGTT...GAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR GCA 90 bp | GACCACTCGAAACTGTCATCCAATAGAAAGAGCAGTTTCAATACCACCACAATGTACAATATGCCTGCTTaGTCTTCTGAAGGTAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: DHSKLSSNRKSSFNTTTMYNMPA*SSEGSA Trigger: AGCGCTACCTTCAGAAGAGCAAGCAGGCATATTGTA...CATTGTGGTGGTATTGAAACTGCTCTTTCTATTGGATGACAGTTTCGAGTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CCA 90 bp | GCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCCAGTTGAACTGAAGCTCACTTCTTCATaGAGAAGGGAAGTCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: AVSMETRSISVLFSPVELKLTSS*RREVFI Trigger: AATAAAGACTTCCCTTCTCCATGAAGAAGTGAGCTT...CAGTTCAACTGGACTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | AATAAGATCAGTGTTTGTAACTTCCTGATATCTATTCAAGTCCTGGTACTTGGGATCAGTAAGACCCCATaGGACAGCAGCACACTGAGT | + |
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Preference number: 4 (lower is better) Translates to: NKISVCNFLISIQVLVLGISKTP*DSSTLS Trigger: ACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGAT...CCCAAGTACCAGGACTTGAATAGATATCAGGAAGTTACAAACACTGATCTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR CCA 90 bp | GACCACTCGAAACTGTCATCCAATAGAAAGAGCAGTTTCAATACCACCACAATGTTAGTCAGCAGTGATTaGCCTTTCTCTTTCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: DHSKLSSNRKSSFNTTTMLVSSD*PFSFRT Trigger: AGTCCTGAAAGAGAAAGGCCAATCACTGCTGACTAA...CATTGTGGTGGTATTGAAACTGCTCTTTCTATTGGATGACAGTTTCGAGTGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | CAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTACTGTTTGAAAAGGAGGACAGCTaGCATCACTTAGCAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QLCLENEANLKMFQLLLFEKEDS*HHLAAQ Trigger: CTGAGCTGCTAAGTGATGTCAGCTGTCCTCCTTTTC...AAACAGTAGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | AGTCTTCAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTATCCAGCAGTTGCTGTTaGCTCGACCAGTGTGCTAAA | + |
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Preference number: 4 (lower is better) Translates to: SLQLCLENEANLKMFQLLSSSCC*LDQCAK Trigger: TTTAGCACACTGGTCGAGTCAACAGCAACTGCTGGA...TAGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTGAAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | AGTCTTCAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTATCTTTCAGGACTCCCTaGAGGCTGTGTCCATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SLQLCLENEANLKMFQLLSFRTP*RLCPWK Trigger: TTTCCATGGACACAGCCTTCAGGGAGTCCTGAAAGA...TAGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTGAAGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | AGCAGTTTCAATACCACCACAATGATAGCTACAGCTTGTACATCGTACTTAACAGGGAAGTCTTTATTCTaGGCAGGAAGGAGAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SSFNTTTMIATACTSYLTGKSLF*AGRRRD Trigger: ATCTCTTCTCCTTCCTGCTCAGAATAAAGACTTCCC...TGTTAAGTACGATGTACAAGCTGTAGCTATCATTGTGGTGGTATTGAAACTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | CCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCAACGTGATGAGGAGGAAATaGGATAATGGATCCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: PDIYSSPGTWVTLANSLNVMRRK*DNGSKN Trigger: GTTTTTGGATCCATTATCTCATTTCCTCCTCATCAC...GTTGAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR TCA 90 bp | CCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCAACGTGTTTGTAACTTCCTaGTATCTATTCAAGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PDIYSSPGTWVTLANSLNVFVTS*YLFKSW Trigger: CCAGGACTTGAATAGATATCAGGAAGTTACAAACAC...GTTGAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR CCA 90 bp | CCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCAACTATCTATTCAAGTCCTaGTACTTGGGTAACTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PDIYSSPGTWVTLANSLNYLFKS*YLGNFG Trigger: GCCAAAGTTACCCAAGTACCAGGACTTGAATAGATA...GTTGAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATGAAGGAGAACATACTTaGCCCTTGCTTCTTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: ERGRGRSIRNIGKSHANYEGEHT*PLLLPI Trigger: AATGGGAAGAAGCAAGGGCCAAGTATGTTCTCCTTC...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTTTCAATACCACCACAATGATAGCTACAGCTTGTACATCGTACTTAACATGGCAAGTTAAGCTATaGATTTCATCAGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSFNTTTMIATACTSYLTWQVKL*ISSGRL Trigger: CAACCTCCCTGATGAAATGCATAGCTTAACTTGCCA...TGTTAAGTACGATGTACAAGCTGTAGCTATCATTGTGGTGGTATTGAAACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CCA 90 bp | CAGTCTTCAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTTTTTCCACAGGTACTTaGCCCTTGCTTCTTCCCATT | + |
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Preference number: 4 (lower is better) Translates to: QSSVMSGKRGKSKNVPTSFSTGT*PLLLPI Trigger: AATGGGAAGAAGCAAGGGCCAAGTACCTGTGGAAAA...AGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTGAAGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | AAGACCACTCGAAACTGTCATCCAATAGAAAGAGCAGTTTCAATACCACCACAAGTGTTTGTAACTTCCTaGTATCTCTCTGTAACATTG | + |
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Preference number: 4 (lower is better) Translates to: KTTRNCHPIERAVSIPPQVFVTS*YLSVTL Trigger: CAATGTTACAGAGAGATATCAGGAAGTTACAAACAC...TTGTGGTGGTATTGAAACTGCTCTTTCTATTGGATGACAGTTTCGAGTGGTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATTTTCATCAGGGAGGTTaGCTTCCATCAAGTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: ERGRGRSIRNIGKSHANYFHQGG*LPSSIS Trigger: TGAAATACTTGATGGAAGTCAACCTCCCTGATGAAA...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATTATACTGTGGTATCCTaGATTGGATCATGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: ERGRGRSIRNIGKSHANYYTVVS*IGSWNR Trigger: TCTGTTCCATGATCCAATGCAGGATACCACAGTATA...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATTCCTGCATTGGATCATaGAACAGAAAGAGGACATTA | + |
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Preference number: 4 (lower is better) Translates to: ERGRGRSIRNIGKSHANYSCIGS*NRKRTL Trigger: TAATGTCCTCTTTCTGTTCCATGATCCAATGCAGGA...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| 3UTR CAA 72 bp | GAGCAGTTTCAATACCACCACAATGATAGCTACAGCTaGTACATCGTACTTAACAGTTTTTGCCATTTTAGC | + |
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Preference number: 4 (lower is better) Translates to: EQFQYHHNDSYS*YIVLNSFCHFS Trigger: GCTAAAATGGCAAAAACTGTTAAGTACGATGTACAAGCTGTAGCTATCATTGTGGTGGTATTGAAACTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR TCA 90 bp | TTTCAATACCACCACAATGATAGCTACAGCTTGTACATCGTACTTAACAGTTTTATTCTTAGTCAGCAGTaGTTGGCCTTTCTCTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FQYHHNDSYSLYIVLNSFILSQQ*LAFLFQ Trigger: CTGAAAGAGAAAGGCCAATCACTGCTGACTAAGAAT...AAAACTGTTAAGTACGATGTACAAGCTGTAGCTATCATTGTGGTGGTATTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR GCA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTTGGCAAGTTAAGCTATaGATTTCATCAGGGAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GIFILGEHSNYICCKVTFWQVKL*ISSGRL Trigger: CAACCTCCCTGATGAAATGCATAGCTTAACTTGCCA...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATTCATACACAGTATGTTaGGATGAAGATAGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ERGRGRSIRNIGKSHANYSYTVC*DEDSSL Trigger: AAGACTGCTATCTTCATCCCAACATACTGTGTATGA...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS TCA 90 bp | TGTCTGTGGCATGGTCATCTTCACGATTCCCTTCTCCTTTCGTTGTaGGTATTCAACTCCATCCAGAGATCCAGAGCAGACAGACGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CLWHGHLHDSLLLSL*VFNSIQRSRADRRF Trigger: GAAACGTCTGTCTGCTCTGGATCTCTGGATGGAGTTGAATACTCACAACGAAAGGAGAAGGGAATCGTGAAGATGACCATGCCACAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS TCA 90 bp | GTGGCAAGAAGTGCAATAATATTTGCCTTCATCAGTAAGACCCCATaGGACAGCAGCACACTGAGTACAGCGTTCTTTAAACTCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: VARSAIIFAFISKTP*DSSTLSTAFFKLFR Trigger: GCGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGGCAAATATTATTGCACTTCTTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000263663.10 ENST00000402170.5 ENST00000404869.7 ENST00000416181.1 ENST00000434858.5 ENST00000497182.1 ENST00000625239.2 |
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| CDS TCA 90 bp | GTGGCAAGAAGTGCAATAATATTTGCCTTCATCAGTAAGACCCCATaGGACAGCAGCACACTGAGTACAGCGTTCTTTAAACTCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: VARSAIIFAFISKTP*DSSTLSTAFFKLFL Trigger: GAGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGGCAAATATTATTGCACTTCTTGCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480197.5 |
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| CDS CCA 90 bp | TCTGCCAAAGTAAGGACAGATAACAGAAGGCAAGTGTCTGTGGCATaGTCATCTTCACGATTCCCTTCTCCTTTCGTTGTGAGTATTCAA | + |
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Preference number: 5 (lower is better) Translates to: SAKVRTDNRRQVSVA*SSSRFPSPFVVSIQ Trigger: TTGAATACTCACAACGAAAGGAGAAGGGAATCGTGAAGATGACCATGCCACAGACACTTGCCTTCTGTTATCTGTCCTTACTTTGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS TCA 90 bp | GTGGCAAGAAGTGCAATAATATTTGCCTTCATCAGTAAGACCCCATaGGACAGCAGCACACTGAGTACAGCGTTCTTTAAACTCTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: VARSAIIFAFISKTP*DSSTLSTAFFKLFQ Trigger: TTGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGGCAAATATTATTGCACTTCTTGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469895.5 |
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| CDS TCA 90 bp | GTGGCAAGAAGTGCAATAATATTTGCCTTCATCAGTAAGACCCCATaGGACAGCAGCACACTGAGTACAGCGTTCTTTAAACTCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: VARSAIIFAFISKTP*DSSTLSTAFFKLFH Trigger: ATGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGGCAAATATTATTGCACTTCTTGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490432.1 |
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| CDS-3UTR CAA 90 bp | GCTGTGTCCATGGAAACACGTTCTATCAGTGTCCTCTTCAGTCCAGTTGAACTGTTGATTCTTCATAGGTaGTCACATGTGTACAATAGC | + |
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Preference number: 5 (lower is better) Translates to: AVSMETRSISVLFSPVELLILHR*SHVYNS Trigger: GCTATTGTACACATGTGACAACCTATGAAGAATCAA...CAGTTCAACTGGACTGAAGAGGACACTGATAGAACGTGTTTCCATGGACACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CAA 90 bp | CTTCCTGATATCTATTCAAGTCCTGGTACTTGGGTAACTTTGGCAAACTCACTCGGTACTTGGGTAACTTaGGCAAACTCACTCAACTTC | + |
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Preference number: 5 (lower is better) Translates to: LPDIYSSPGTWVTLANSLGTWVT*ANSLNF Trigger: GAAGTTGAGTGAGTTTGCCAAAGTTACCCAAGTACC...GAGTGAGTTTGCCAAAGTTACCCAAGTACCAGGACTTGAATAGATATCAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTCAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTCTTTTCCACAGGTACTaGGCCCTTGCTTCTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: QSSVMSGKRGKSKNVPTSLFHRY*ALASSH Trigger: ATGGGAAGAAGCAAGGGCCAAGTACCTGTGGAAAAG...AGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTGAAGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CAA 90 bp | GCCAAGACTCTATACCAAAGATTCCTCTGTCACGTCCATATAATTTCATCTGTTCCTGATTGTGATGCTTaGCTGACGGGGAAAGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: AKTLYQRFLCHVHIISSVPDCDA*LTGKGF Trigger: AAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGG...AACAGATGAAATTATATGGACGTGACAGAGGAATCTTTGGTATAGAGTCTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CAA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTGGAAGGAGAACATACTaGGCCCTTGCTTCTTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: GIFILGEHSNYICCKVTFGRRTY*ALASSH Trigger: ATGGGAAGAAGCAAGGGCCAAGTATGTTCTCCTTCC...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS TCA 90 bp | CTGAGCCCTATCAATAGGCTCTCACAGTTAGTGATGAGGAGGAAATaGGATAATGGATCCAAAAACTTTGTAATCTGTAAGGTACTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LSPINRLSQLVMRRK*DNGSKNFVICKVLC Trigger: ACAGAGTACCTTACAGATTACAAAGTTTTTGGATCCATTATCTCATTTCCTCCTCATCACTAACTGTGAGAGCCTATTGATAGGGCTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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| CDS GCA 90 bp | GTTTCCTTCCAGTGGTATAAACTGGGTTCTTACAATATGCCTGCTTaGTCTTCTGAAGGTAGCGCTTCCAAAAATTATGTAAAACATCGT | + |
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Preference number: 5 (lower is better) Translates to: VSFQWYKLGSYNMPA*SSEGSASKNYVKHR Trigger: ACGATGTTTTACATAATTTTTGGAAGCGCTACCTTCAGAAGAGCAAGCAGGCATATTGTAAGAACCCAGTTTATACCACTGGAAGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000263663.10 ENST00000402170.5 ENST00000434858.5 ENST00000469895.5 ENST00000480197.5 |
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| CDS TCA 90 bp | TTTAGCATATCGCTGTCCAAAGTGCATTCTGTGGAACTCAAGTCCTaGTGGACGTTATGTACATACACCAAACGATTTTGTTCTCAAATT | + |
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Preference number: 5 (lower is better) Translates to: FSISLSKVHSVELKS*WTLCTYTKRFCSQI Trigger: AATTTGAGAACAAAATCGTTTGGTGTATGTACATAACGTCCATCAGGACTTGAGTTCCACAGAATGCACTTTGGACAGCGATATGCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000404869.7 ENST00000490432.1 |
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| CDS-3UTR CAA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATATTTCATCAGGGAGGTaGACTTCCATCAAGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: ERGRGRSIRNIGKSHANYISSGR*TSIKYF Trigger: GAAATACTTGATGGAAGTCAACCTCCCTGATGAAAT...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CAA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTCTGTGGTATCCTGCATaGGATCATGGAACAGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GIFILGEHSNYICCKVTFLWYPA*DHGTER Trigger: TCTTTCTGTTCCATGATCCAATGCAGGATACCACAG...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CAA 90 bp | GCCAAGACTCTATACCAAAGATTCCTCTGTCACGTCCATATAATTTCATCTGTTGTTGAGGGCTTTTATTaGGGTATTAGGAATAAGATC | + |
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Preference number: 5 (lower is better) Translates to: AKTLYQRFLCHVHIISSVVEGFY*GIRNKI Trigger: GATCTTATTCCTAATACCCAAATAAAAGCCCTCAAC...AACAGATGAAATTATATGGACGTGACAGAGGAATCTTTGGTATAGAGTCTTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CAA 90 bp | GAAAGGGGAAGAGGGAGGAGTATTAGAAATATAGGCAAGTCTCATGCAAATTATAATGATAGCTACAGCTaGTACATCGTACTTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: ERGRGRSIRNIGKSHANYNDSYS*YIVLNS Trigger: ACTGTTAAGTACGATGTACAAGCTGTAGCTATCATT...ATAATTTGCATGAGACTTGCCTATATTTCTAATACTCCTCCCTCTTCCCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CAA 90 bp | CAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTACTGTTTATTTCATCAGGGAGGTaGACTTCCATCAAGTATTTC | + |
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Preference number: 5 (lower is better) Translates to: QLCLENEANLKMFQLLLFISSGR*TSIKYF Trigger: GAAATACTTGATGGAAGTCAACCTCCCTGATGAAAT...AAACAGTAGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS-3UTR CAA 90 bp | GGGATCTTTATTTTGGGGGAACATTCCAATTACATATGTTGCAAGGTAACATTTACAGGGATCTTTATTTaGGGGGAACATTCCAATTAC | + |
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Preference number: 5 (lower is better) Translates to: GIFILGEHSNYICCKVTFTGIFI*GEHSNY Trigger: GTAATTGGAATGTTCCCCCAAAATAAAGATCCCTGT...AAATGTTACCTTGCAACATATGTAATTGGAATGTTCCCCCAAAATAAAGATCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000492648.2 |
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| CDS-3UTR CAA 90 bp | CAGTTATGTCTGGAAAACGAGGCAAATCTAAAAATGTTCCAACTTCTACTGTTTAATGATAGCTACAGCTaGTACATCGTACTTAACAGT | + |
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Preference number: 5 (lower is better) Translates to: QLCLENEANLKMFQLLLFNDSYS*YIVLNS Trigger: ACTGTTAAGTACGATGTACAAGCTGTAGCTATCATT...AAACAGTAGAAGTTGGAACATTTTTAGATTTGCCTCGTTTTCCAGACATAACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS CCA 72 bp | CGTTCTTTAAACTCTTCCATCAAAGCGTGTGCCATTTaGCCGAGGGCGGGGGATCACCCCTATAATCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSLNSSIKACAI*PRAGDHPYNPS Trigger: GCTGGGATTATAGGGGTGATCCCCCGCCCTCGGCCAAATGGCACACGCTTTGATGGAAGAGTTTAAAGAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000490432.1 |
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| CDS TCA 72 bp | CCTTCATCAGTAAGACCCCATGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAACTCTTCCGCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: PSSVRPHETAAH*VQRSLNSSASS Trigger: CGAGGAGGCGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000263663.10 ENST00000402170.5 ENST00000404869.7 ENST00000416181.1 ENST00000434858.5 ENST00000497182.1 ENST00000625239.2 |
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| CDS TCA 72 bp | CCTTCATCAGTAAGACCCCATGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAACTCTTCCTCGCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSSVRPHETAAH*VQRSLNSSSPS Trigger: GCTCGGCGAGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480197.5 |
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| CDS TCA 72 bp | CCTTCATCAGTAAGACCCCATGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAACTCTTCCAAAGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: PSSVRPHETAAH*VQRSLNSSKAA Trigger: CGCGGCTTTGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469895.5 |
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| CDS TCA 72 bp | CAGAGCAGACAGACGTTTCTGATTGTGATGCTTTGCTaGCGGGGAAAGGTTTTCGAGTGTGGATGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: QSRQTFLIVMLC*RGKVFECGCQT Trigger: AGTCTGACATCCACACTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGAAACGTCTGTCTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS CAA 72 bp | GATCCAGAGCAGACAGACGTTTCTGATTGTGATGCTTaGCTGACGGGGAAAGGTTTTCGAGTGTGGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: DPEQTDVSDCDA*LTGKGFRVWMS Trigger: TGACATCCACACTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGAAACGTCTGTCTGCTCTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS TCA 72 bp | TGGTCCTCTTCAACAAACCTGATTGTGATGCTTTGCTaGCGGGGAAAGGTTTTCGAGTGTGGATGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: WSSSTNLIVMLC*RGKVFECGCQT Trigger: AGTCTGACATCCACACTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGGTTTGTTGAAGAGGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434858.5 |
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| CDS TCA 72 bp | CCTTCATCAGTAAGACCCCATGAGACAGCAGCACACTaGGTACAGCGTTCTTTAAACTCTTCCATCAAAGCG | + |
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Preference number: 6 (lower is better) Translates to: PSSVRPHETAAH*VQRSLNSSIKA Trigger: CGCTTTGATGGAAGAGTTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490432.1 |
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| CDS CCA 72 bp | GTAAGGACAGATAACAGAAGGCAAGTGTCTGTGGCATaGTCATCTTCACGATTCCCTTCTCCTTTCGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: VRTDNRRQVSVA*SSSRFPSPFVV Trigger: CACAACGAAAGGAGAAGGGAATCGTGAAGATGACCATGCCACAGACACTTGCCTTCTGTTATCTGTCCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS TCA 72 bp | CACTTGAACTTTATGTCCCTGATTGTGATGCTTTGCTaGCGGGGAAAGGTTTTCGAGTGTGGATGTCAGACT | + |
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Preference number: 6 (lower is better) Translates to: HLNFMSLIVMLC*RGKVFECGCQT Trigger: AGTCTGACATCCACACTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGGGACATAAAGTTCAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000402170.5 |
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| CDS CAA 72 bp | GATCCACTTGAACTTTATGTCCCTGATTGTGATGCTTaGCTGACGGGGAAAGGTTTTCGAGTGTGGATGTCA | + |
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Preference number: 6 (lower is better) Translates to: DPLELYVPDCDA*LTGKGFRVWMS Trigger: TGACATCCACACTCGAAAACCTTTCCCCGTCAGCAAAGCATCACAATCAGGGACATAAAGTTCAAGTGGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000402170.5 |
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| CDS CCA 72 bp | ACTGGTTTAGCATATCGCTGTCCAAAGTGCATTCTGTaGAACTCAAGTCCTGATGGACGTTATGTACATACA | + |
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Preference number: 6 (lower is better) Translates to: TGLAYRCPKCIL*NSSPDGRYVHT Trigger: TGTATGTACATAACGTCCATCAGGACTTGAGTTCCACAGAATGCACTTTGGACAGCGATATGCTAAACCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000404869.7 ENST00000490432.1 |
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| CDS TCA 72 bp | AGTGCAATAATATTTGCCTTCATCAGTAAGACCCCATaGGACAGCAGCACACTGAGTACAGCGTTCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SAIIFAFISKTP*DSSTLSTAFFK Trigger: TTTAAAGAACGCTGTACTCAGTGTGCTGCTGTCTCATGGGGTCTTACTGATGAAGGCAAATATTATTGCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000263663.10 ENST00000402170.5 ENST00000404869.7 ENST00000416181.1 ENST00000434858.5 ENST00000469895.5 ENST00000480197.5 ENST00000490432.1 ENST00000497182.1 ENST00000625239.2 |
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| CDS GCA 72 bp | CAGTGGTATAAACTGGGTTCTTACAATATGCCTGCTTaGTCTTCTGAAGGTAGCGCTTCCAAAAATTATGTA | + |
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Preference number: 6 (lower is better) Translates to: QWYKLGSYNMPA*SSEGSASKNYV Trigger: TACATAATTTTTGGAAGCGCTACCTTCAGAAGAGCAAGCAGGCATATTGTAAGAACCCAGTTTATACCACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000263663.10 ENST00000402170.5 ENST00000434858.5 ENST00000469895.5 ENST00000480197.5 |
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| CDS CAA 72 bp | CCTCTTCAACAAACCTCAAAAGATCTGAAAGTGTTATaGCTTCTCTCTGCCAAAGTAAGGACAGATAACAGA | + |
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Preference number: 6 (lower is better) Translates to: PLQQTSKDLKVL*LLSAKVRTDNR Trigger: TCTGTTATCTGTCCTTACTTTGGCAGAGAGAAGCAATAACACTTTCAGATCTTTTGAGGTTTGTTGAAGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000263663.10 |
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| CDS TCA 72 bp | TATGTACATACACCAAACGATTTTGTTCTCAAATTGTaGATAACACACAGGACATTCCCTTTAACTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: YVHTPNDFVLKL*ITHRTFPLTLG Trigger: GCCCAGAGTTAAAGGGAATGTCCTGTGTGTTATTCACAATTTGAGAACAAAATCGTTTGGTGTATGTACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000404869.7 ENST00000490432.1 |
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| CDS CAA 90 bp | TTGGAATGTTGGCATTGCATGAGTGACAAAAATCAACCCAATTCTTaGGGACTTAGACTACATATCAGGCTGAAATGGCAATTTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: LECWHCMSDKNQPNS*GLRLHIRLKWQFLK Trigger: TTTTAAAAATTGCCATTTCAGCCTGATATGTAGTCTAAGTCCCAAAGAATTGGGTTGATTTTTGTCACTCATGCAATGCCAACATTCCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000497182.1 |
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| CDS TCA 72 bp | ATCAATAGGCTCTCACAGTTAGTGATGAGGAGGAAATaGGATAATGGATCCAAAAACTTTGTAATCTGTAAG | + |
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Preference number: 6 (lower is better) Translates to: INRLSQLVMRRK*DNGSKNFVICK Trigger: CTTACAGATTACAAAGTTTTTGGATCCATTATCTCATTTCCTCCTCATCACTAACTGTGAGAGCCTATTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000416181.1 |
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