Pregenerated sensors for TAF1A (Homo sapiens)
Ensembl gene IDs: ENSG00000143498Ensembl transcript IDs: ENST00000350027.8, ENST00000352967.9, ENST00000366890.5, ENST00000391883.2, ENST00000465263.1, ENST00000480065.1, ENST00000487009.5
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACTGGGATTAGAAGTGTaGGCCACTGCGCCCGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: VSGITNARHCAQLLFVFLLGLEV*ATAPGR Trigger: TCGGCCGGGCGCAGTGGCTCACACTTCTAATCCCAG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| 3UTR-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAAGAAGTGTGAGCCACTaGGCCCGGCCGAGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSGITNARHCAQLLFVFLRSVSH*ARPRKS Trigger: ACTCTTTCTCGGCCGGGCGCAGTGGCTCACACTTCT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| 3UTR-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACTGGTCTTGAACTCCTaGCCTCATGATCCACCCACC | + |
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Preference number: 2 (lower is better) Translates to: VSGITNARHCAQLLFVFLLVLNS*PHDPPT Trigger: GGTGGGTGGATCATGAGGTCAGGAGTTCAAGACCAG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACAGCAGGCGTATCGTTaGCCTCGCCTCGACCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLQQAYR*PRLDPG Trigger: TCCGGGGTCGAGGCGAGGCCAACGATACGCCTGCTG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACGACTCCGGCCCACGTaGAGAAATTCCCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLRLRPT*RNSHRK Trigger: CTTCCGGTGGGAATTTCTTCACGTGGGCCGGAGTCG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACGTAACTCCTCCTGCTaGAGCAGGCGTATCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLRNSSC*SRRIVG Trigger: GCCAACGATACGCCTGCTGCAGCAGGAGGAGTTACG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACAGGCAGGAGTACGGTaGTGCAATCTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLQAGVR*CNLGSL Trigger: CAGTGAGCCGAGATTGCACCACCGTACTCCTGCCTG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCTCGTAACTCCTCCTaGTGCAGCAGGCGTATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLARNSS*CSRRIV Trigger: AACGATACGCCTGCTGCAGCAGGAGGAGTTACGAGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAATCTGGGATTACAAATaGCCGCCACTGCGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLIWDYK*PPLRPA Trigger: AGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGAT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATCTTCCAGCTGTGGTTaGACACATCCTGGGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLSSSCG*THPGLL Trigger: CAGTAGCCCAGGATGTGTTCAACCACAGCTGGAAGA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCAGCAGGCGTATCGTTaGCCTCGCCTCGACCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFQQAYR*PRLDPG Trigger: TCCGGGGTCGAGGCGAGGCCAACGATACGCCTGCTG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCAGCTTGCTGCCATTaGTGCTTCAGCAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLAACCH*CFSRAS Trigger: AGAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATTGGTGAGTACCTCTTaGGCTCCATCTCGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLLVSTS*APSRSP Trigger: TGGGGATCGAGATGGAGCCCAAGAGGTACTCACCAA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCATTCCTGCACCACTaGGCACAGATGTTTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLAFLHH*AQMFPL Trigger: AAGTGGAAACATCTGTGCTCAGTGGTGCAGGAATGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGAGTTCCACTCTTCTTaGACCCACGCAAGGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLEFHSS*THARWF Trigger: AAACCACCTTGCGTGGGTTCAAGAAGAGTGGAACTC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGATGTCTTCCAGCTGTaGTTGAACACATCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLDVFQL*LNTSWA Trigger: AGCCCAGGATGTGTTCAACCACAGCTGGAAGACATC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCGACTCCGGCCCACGTaGAGAAATTCCCACCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFRLRPT*RNSHRK Trigger: CTTCCGGTGGGAATTTCTTCACGTGGGCCGGAGTCG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAATGTATTCTGCAGCTTaGTGCCATTGGTGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLMYSAA*CHWCFS Trigger: GCTGAAGCACCAATGGCAGCAAGCTGCAGAATACAT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATTCAAGCAATTCTCCTaGTTCAGCCTCCCGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLFKQFS*FSLPSI Trigger: GATACTCGGGAGGCTGAAGCAGGAGAATTGCTTGAA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCTGAAATGAAAGCCTaGCCACCAGTTTTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLAEMKA*PPVFPG Trigger: TCCAGGAAAAACTGGTGGCCAGGCTTTCATTTCAGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACATATGCATAATTGGTaGGTACCTCTTGGGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLHMHNW*VPLGLH Trigger: ATGGAGCCCAAGAGGTACTCACCAATTATGCATATG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCGTAACTCCTCCTGCTaGAGCAGGCGTATCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFRNSSC*SRRIVG Trigger: GCCAACGATACGCCTGCTGCAGCAGGAGGAGTTACG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAAGGAAAATGCATTCCTaGACCACTGAGCACAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLRKMHS*TTEHRC Trigger: ACATCTGTGCTCAGTGGTGCAGGAATGCATTTTCCT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCCACCAGTTTTTCCTaGAGTTCCACTCTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLATSFS*SSTLLE Trigger: TTCAAGAAGAGTGGAACTCCAGGAAAAACTGGTGGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCTCGTAACTCCTCCTaGTGCAGCAGGCGTATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFARNSS*CSRRIV Trigger: AACGATACGCCTGCTGCAGCAGGAGGAGTTACGAGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAATGTCTCCATGTCTCTaGCTCACTCAGATTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLMSPCL*LTQISL Trigger: AAGAGAAATCTGAGTGAGGCAGAGACATGGAGACAT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACACATCCTGGGCTACTaGATTGTAAGCATAATCATC | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLHILGY*IVSIII Trigger: GATGATTATGCTTACAATGCAGTAGCCCAGGATGTG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACTTTTAATTCTTCACTaGAATCACTCATACCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLLLILH*NHSYPP Trigger: AGGCGGGTATGAGTGATTTCAGTGAAGAATTAAAAG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACCTTTTGTAGCTATCTaGATCTTCCAAGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLPFVAI*IFQGLK Trigger: TTTCAGACCTTGGAAGATTCAGATAGCTACAAAAGG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCTCTTCCAGCTGTGGTTaGACACATCCTGGGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFSSSCG*THPGLL Trigger: CAGTAGCCCAGGATGTGTTCAACCACAGCTGGAAGA...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACACACTTATCAATTTTaGTCTTGGTGCCTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLHTYQF*SWCLLS Trigger: AGACAGAAGGCACCAAGATCAAAATTGATAAGTGTG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACAATGCAGAAATATTTaGAGATGTCTTCCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLQCRNI*RCLPAV Trigger: CACAGCTGGAAGACATCTGCAAATATTTCTGCATTG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCAGCTTGCTGCCATTaGTGCTTCAGCAGAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFAACCH*CFSRAS Trigger: AGAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCTTGGTGAGTACCTCTTaGGCTCCATCTCGATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFLVSTS*APSRSP Trigger: TGGGGATCGAGATGGAGCCCAAGAGGTACTCACCAA...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGTTTCTACGTATGTTTaGAGCCAAGGAAAATGCATT | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLVSTYV*SQGKCI Trigger: AATGCATTTTCCTTGGCTTCAAACATACGTAGAAAC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATCTTTAAGCATTCCATaGTGCAGAAGGTATAATGCA | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLSLSIP*CRRYNA Trigger: TGCATTATACCTTCTGCATCATGGAATGCTTAAAGA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGAGTTCCACTCTTCTTaGACCCACGCAAGGTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFEFHSS*THARWF Trigger: AAACCACCTTGCGTGGGTTCAAGAAGAGTGGAACTC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACTTCCAATCACTTTTTaGCCAAAAGTAGCTGAAATG | + |
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Preference number: 4 (lower is better) Translates to: VSGITNARHCAQLLFVFLLPITF*PKVAEM Trigger: CATTTCAGCTACTTTTGGGCAAAAAGTGATTGGAAG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCATGTATTCTGCAGCTTaGTGCCATTGGTGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFMYSAA*CHWCFS Trigger: GCTGAAGCACCAATGGCAGCAAGCTGCAGAATACAT...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCTGAAATGAAAGCCTaGCCACCAGTTTTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFAEMKA*PPVFPG Trigger: TCCAGGAAAAACTGGTGGCCAGGCTTTCATTTCAGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCATATGCATAATTGGTaGGTACCTCTTGGGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFHMHNW*VPLGLH Trigger: ATGGAGCCCAAGAGGTACTCACCAATTATGCATATG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCCACCAGTTTTTCCTaGAGTTCCACTCTTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFATSFS*SSTLLE Trigger: TTCAAGAAGAGTGGAACTCCAGGAAAAACTGGTGGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCATGTCTCCATGTCTCTaGCTCACTCAGATTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFMSPCL*LTQISL Trigger: AAGAGAAATCTGAGTGAGGCAGAGACATGGAGACAT...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCACATCCTGGGCTACTaGATTGTAAGCATAATCATC | + |
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Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFHILGY*IVSIII Trigger: GATGATTATGCTTACAATGCAGTAGCCCAGGATGTG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCTTTTAATTCTTCACTaGAATCACTCATACCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFLLILH*NHSYPP Trigger: AGGCGGGTATGAGTGATTTCAGTGAAGAATTAAAAG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCCTTTTGTAGCTATCTaGATCTTCCAAGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFPFVAI*IFQGLK Trigger: TTTCAGACCTTGGAAGATTCAGATAGCTACAAAAGG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCACACTTATCAATTTTaGTCTTGGTGCCTTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFHTYQF*SWCLLS Trigger: AGACAGAAGGCACCAAGATCAAAATTGATAAGTGTG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCAATGCAGAAATATTTaGAGATGTCTTCCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFQCRNI*RCLPAV Trigger: CACAGCTGGAAGACATCTGCAAATATTTCTGCATTG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGTTTCTACGTATGTTTaGAGCCAAGGAAAATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFVSTYV*SQGKCI Trigger: AATGCATTTTCCTTGGCTTCAAACATACGTAGAAAC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR TCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCTCTTTAAGCATTCCATaGTGCAGAAGGTATAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFSLSIP*CRRYNA Trigger: TGCATTATACCTTCTGCATCATGGAATGCTTAAAGA...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR GCA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCTTCCAATCACTTTTTaGCCAAAAGTAGCTGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: TIARGKVFANNNCCRAIFLPITF*PKVAEM Trigger: CATTTCAGCTACTTTTGGGCAAAAAGTGATTGGAAG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCAGCAGGCGTATCGTaGGCCTCGCCTCGACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLAAGVS*ASPRPR Trigger: CCGGGGTCGAGGCGAGGCCAACGATACGCCTGCTGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS CCA 90 bp | TCTGATCCTCTCTCCTCAGTCTCATCCGGGCAGCAGGGGATAGTGTaGATGATACATACATGGAGATGGCAGCTGGAGCCAACTTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDPLSSVSSGQQGIV*MIHTWRWQLEPTFS Trigger: AGAGAAAGTTGGCTCCAGCTGCCATCTCCATGTATGTATCATCCACACTATCCCCTGCTGCCCGGATGAGACTGAGGAGAGAGGATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480065.1 |
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| CDS TCA 90 bp | AAAATATCAGTGCAGAGTATTCCAACCAGGGTTGCACAAGACTTCTaGTCCTCTCTCCTCAGTCTCATCCGGGCAGCAGGGGATAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KISVQSIPTRVAQDF*SSLLSLIRAAGDSV Trigger: CACACTATCCCCTGCTGCCCGGATGAGACTGAGGAGAGAGGATCAGAAGTCTTGTGCAACCCTGGTTGGAATACTCTGCACTGATATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480065.1 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCAGCAGGCGTATCGTaGGCCTCGCCTCGACCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFAAGVS*ASPRPR Trigger: CCGGGGTCGAGGCGAGGCCAACGATACGCCTGCTGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATGCAGCTTGCTGCCATaGGTGCTTCAGCAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLCSLLP*VLQQSF Trigger: GAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGCA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAATTGGTGAGTACCTCTaGGGCTCCATCTCGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLIGEYL*GSISIP Trigger: GGGGATCGAGATGGAGCCCAAGAGGTACTCACCAAT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGTCTTCCAGCTGTGGTaGAACACATCCTGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLVFQLW*NTSWAT Trigger: AGTAGCCCAGGATGTGTTCAACCACAGCTGGAAGAC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGGAGTTCCACTCTTCTaGAACCCACGCAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLGVPLF*NPRKVV Trigger: AACCACCTTGCGTGGGTTCAAGAAGAGTGGAACTCC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACATGTATTCTGCAGCTaGCTGCCATTGGTGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLHVFCS*LPLVLQ Trigger: CTGAAGCACCAATGGCAGCAAGCTGCAGAATACATG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS TCA 90 bp | TTTCTACGTATGTTTGAAGCCAAGGAAAATGCATTCCTGCACCACTaGGCACAGATGTTTCCACTTCTTCATCATCTGTCACAGGCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRMFEAKENAFLHH*AQMFPLLHHLSQAL Trigger: AAGGGCCTGTGACAGATGATGAAGAAGTGGAAACATCTGTGCTCAGTGGTGCAGGAATGCATTTTCCTTGGCTTCAAACATACGTAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000366890.5 ENST00000391883.2 ENST00000465263.1 ENST00000487009.5 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCTGCAGCTTGCTGCCATaGGTGCTTCAGCAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFCSLLP*VLQQSF Trigger: GAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGCA...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCATTGGTGAGTACCTCTaGGGCTCCATCTCGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFIGEYL*GSISIP Trigger: GGGGATCGAGATGGAGCCCAAGAGGTACTCACCAAT...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAGCACACTTATCAATTTaGATCTTGGTGCCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLAHLSI*ILVPSV Trigger: GACAGAAGGCACCAAGATCAAAATTGATAAGTGTGC...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATTAAACAAGCACTTGTaGTCTGAGCAAAATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLLNKHL*SEQNPS Trigger: GGAAGGATTTTGCTCAGACAACAAGTGCTTGTTTAA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTACGGTTAGCAAAAGTATaGAAACTCTCCATGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLRLAKV*KLSMLL Trigger: AAGCAACATGGAGAGTTTCAATACTTTTGCTAACCG...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGTCTTCCAGCTGTGGTaGAACACATCCTGGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFVFQLW*NTSWAT Trigger: AGTAGCCCAGGATGTGTTCAACCACAGCTGGAAGAC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTATCAATGCAGAAATATTaGCAGATGTCTTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLSMQKY*QMSSSC Trigger: ACAGCTGGAAGACATCTGCAAATATTTCTGCATTGA...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGGAGTTCCACTCTTCTaGAACCCACGCAAGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFGVPLF*NPRKVV Trigger: AACCACCTTGCGTGGGTTCAAGAAGAGTGGAACTCC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAAGTTTCTACGTATGTTaGAAGCCAAGGAAAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLSFYVC*KPRKMH Trigger: ATGCATTTTCCTTGGCTTCAAACATACGTAGAAACT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000350027.8 ENST00000366890.5 |
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| CDS-3UTR CAA 90 bp | GTATCTGGGATTACAAATGCCCGCCACTGCGCCCAGCTACTTTTTGTATTTTTAAACTTAAACAAGCACTaGTTGTCTGAGCAAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSGITNARHCAQLLFVFLNLNKH*LSEQNP Trigger: AGGATTTTGCTCAGACAACAAGTGCTTGTTTAAGTT...TAAAAATACAAAAAGTAGCTGGGCGCAGTGGCGGGCATTTGTAATCCCAGATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000350027.8 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCATGTATTCTGCAGCTaGCTGCCATTGGTGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFHVFCS*LPLVLQ Trigger: CTGAAGCACCAATGGCAGCAAGCTGCAGAATACATG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCGCACACTTATCAATTTaGATCTTGGTGCCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFAHLSI*ILVPSV Trigger: GACAGAAGGCACCAAGATCAAAATTGATAAGTGTGC...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCGGTTAGCAAAAGTATaGAAACTCTCCATGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFRLAKV*KLSMLL Trigger: AAGCAACATGGAGAGTTTCAATACTTTTGCTAACCG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCTCAATGCAGAAATATTaGCAGATGTCTTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFSMQKY*QMSSSC Trigger: ACAGCTGGAAGACATCTGCAAATATTTCTGCATTGA...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCAGTTTCTACGTATGTTaGAAGCCAAGGAAAATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFSFYVC*KPRKMH Trigger: ATGCATTTTCCTTGGCTTCAAACATACGTAGAAACT...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCAACTTAAACAAGCACTaGTTGTCTGAGCAAAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFNLNKH*LSEQNP Trigger: AGGATTTTGCTCAGACAACAAGTGCTTGTTTAAGTT...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS-3UTR CAA 90 bp | ACAATAGCAAGAGGCAAAGTATTTGCAAACAATAACTGCTGTAGAGCTATATTCCAAGAGGCAAAGTATTaGCAAACAATAACTGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TIARGKVFANNNCCRAIFQEAKY*QTITAV Trigger: TACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTG...GAATATAGCTCTACAGCAGTTATTGTTTGCAAATACTTTGCCTCTTGCTATTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000352967.9 |
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| CDS TCA 72 bp | GTGCAGAGTATTCCAACCAGGGTTGCACAAGACTTCTaGTCCTCTCTCCTCAGTCTCATCCGGGCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQSIPTRVAQDF*SSLLSLIRAAG Trigger: CCCTGCTGCCCGGATGAGACTGAGGAGAGAGGATCAGAAGTCTTGTGCAACCCTGGTTGGAATACTCTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480065.1 |
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| CDS CCA 72 bp | CTCTCCTCAGTCTCATCCGGGCAGCAGGGGATAGTGTaGATGATACATACATGGAGATGGCAGCTGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSVSSGQQGIV*MIHTWRWQLEP Trigger: TGGCTCCAGCTGCCATCTCCATGTATGTATCATCCACACTATCCCCTGCTGCCCGGATGAGACTGAGGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480065.1 |
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| CDS TCA 72 bp | CTTTTCCCTCCAATGGCCACAGTTTCTACGTATGTTTaGAGCCAAGGAAAATGCATTCCTGCACCACTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LFPPMATVSTYV*SQGKCIPAPLS Trigger: GCTCAGTGGTGCAGGAATGCATTTTCCTTGGCTTCAAACATACGTAGAAACTGTGGCCATTGGAGGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000391883.2 ENST00000465263.1 ENST00000487009.5 |
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| CDS GCA 72 bp | ATCTTCCAAGGTCTGAAAATAACTGTACATGTATTCTaGAGCTTGCTGCCATTGGTGCTTCAGCAGAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFQGLKITVHVF*SLLPLVLQQSF Trigger: GAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGCAGAATACATGTACAGTTATTTTCAGACCTTGGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000391883.2 ENST00000465263.1 ENST00000487009.5 |
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| CDS CAA 72 bp | CAAGGTCTGAAAATAACTGTACATGTATTCTGCAGCTaGCTGCCATTGGTGCTTCAGCAGAGCTTCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QGLKITVHVFCS*LPLVLQQSFLD Trigger: ATCCAAGAAGCTCTGCTGAAGCACCAATGGCAGCAAGCTGCAGAATACATGTACAGTTATTTTCAGACCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000391883.2 ENST00000465263.1 ENST00000487009.5 |
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| CDS TCA 72 bp | AAGGCATTCTGGGGGCGACAGAAATGTTCTATATCATaGTTACCATGGTGGTTCATGAATGTAACGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: KAFWGRQKCSIS*LPWWFMNVTHP Trigger: TGGATGCGTTACATTCATGAACCACCATGGTAATCATGATATAGAACATTTCTGTCGCCCCCAGAATGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480065.1 |
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| CDS TCA 72 bp | CTTCATCATCTGTCACAGGCCCTTTTAATTCTTCACTaGAATCACTCATACCCGCCTAAATTTAGAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHHLSQALLILH*NHSYPPKFRAP Trigger: AGGAGCTCTAAATTTAGGCGGGTATGAGTGATTTCAGTGAAGAATTAAAAGGGCCTGTGACAGATGATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000366890.5 ENST00000391883.2 ENST00000465263.1 ENST00000487009.5 |
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| CDS CAA 72 bp | AAACTTTTCATCATATGCATAATTGGTGAGTACCTCTaGGGCTCCATCTCGATCCCCATAGAATTCCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KLFIICIIGEYL*GSISIPIEFQH Trigger: ATGCTGGAATTCTATGGGGATCGAGATGGAGCCCAAGAGGTACTCACCAATTATGCATATGATGAAAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000350027.8 ENST00000352967.9 ENST00000366890.5 ENST00000391883.2 ENST00000465263.1 ENST00000480065.1 ENST00000487009.5 |
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