Pregenerated sensors for TAF11 (Homo sapiens)
Ensembl gene IDs: ENSG00000064995Ensembl transcript IDs: ENST00000361288.9, ENST00000420584.3, ENST00000650109.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGAATCCTTGGAGGCCTaGGATACTAAAGCACCAATG | + |
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Preference number: 2 (lower is better) Translates to: NQATYFLGVTNIRVLRKTESLEA*DTKAPM Trigger: CATTGGTGCTTTAGTATCTCAGGCCTCCAAGGATTC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGATCGCGGAGATGCCTaGGGCAGAAGCTCGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLDRGDA*GRSSET Trigger: GGTTTCCGAGCTTCTGCCTCAGGCATCTCCGCGATC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGGCAGGAGGACTGCTTaGAGCCAGGAGTTCACGACC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLGRRTA*SQEFTT Trigger: GGTCGTGAACTCCTGGCTTCAAGCAGTCCTCCTGCC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCTCGCCTTCCTCCGCTaGAGCTTCTTTCAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLAFLR*SFFQVH Trigger: GTGGACTTGAAAGAAGCTGCAGCGGAGGAAGGCGAG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCTCACACACATCCAGTaGATCCCACACAGGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLTHIQ*IPHRSP Trigger: GGGTGACCTGTGTGGGATGCACTGGATGTGTGTGAG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCTCAGGAGACTGAGGTaGGAGGGTCACTTAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLRRLR*EGHLSP Trigger: TGGGCTTAAGTGACCCTCCCACCTCAGTCTCCTGAG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTAAATCTGAGACATCCTaGCTCTCGAGCTCGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLKSETS*LSSSPS Trigger: GGAAGGCGAGCTCGAGAGTCAGGATGTCTCAGATTT...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGATCGCGGAGATGCCTaGGGCAGAAGCTCGGAAACC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTDRGDA*GRSSET Trigger: GGTTTCCGAGCTTCTGCCTCAGGCATCTCCGCGATC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACATCGGAGGGCGACTCGTaGGCATCGTCCATCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTSEGDS*ASSITD Trigger: ATCCGTGATGGACGATGCCCACGAGTCGCCCTCCGA...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGTGCCAGTGATGGACTaGATCAGCCTTTTGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLVPVMD*ISLLMA Trigger: AGCCATCAAAAGGCTGATCCAGTCCATCACTGGCAC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGCAATAACAACATTCTaGGACACAGAGGTGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLAITTF*DTEVPV Trigger: CACTGGCACCTCTGTGTCTCAGAATGTTGTTATTGC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGAATCCTTGGAGGCCTaGGATACTAAAGCACCAATG | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLESLEA*DTKAPM Trigger: CATTGGTGCTTTAGTATCTCAGGCCTCCAAGGATTC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGAAAGGTTTTCTCTCTaGAAGCAGTTCCCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLERFSL*KQFPCP Trigger: TGGACAGGGGAACTGCTTTCAGAGAGAAAACCTTTC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTTTTCAAGTCCACATCTaGGTCTCCGTCAGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLFQVHI*VSVSFL Trigger: GAGGAAACTGACGGAGACGCAGATGTGGACTTGAAA...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACCAGGAGTTCAAGGCTaGAGTCATGCCGCTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTPGVQG*SHAAAL Trigger: GAGTGCAGCGGCATGACTGCAGCCTTGAACTCCTGG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCTCACACACATCCAGTaGCTTTTGATGGCTGCCTTA | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLTHIQ*LLMAAL Trigger: TAAGGCAGCCATCAAAAGGCACTGGATGTGTGTGAG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420584.3 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACTCGCCTTCCTCCGCTaGAGCTTCTTTCAAGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTLAFLR*SFFQVH Trigger: GTGGACTTGAAAGAAGCTGCAGCGGAGGAAGGCGAG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACTCGGAAACCCGAGCTaGACAGGCCAGGATCTTACT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTLGNPS*TGQDLT Trigger: AGTAAGATCCTGGCCTGTGCAGCTCGGGTTTCCGAG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420584.3 |
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| CDS-3UTR CCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTTCCAGAAGATGCTTATaGCCCACGTATCTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLSRRCL*PTYLLP Trigger: TGGAAGAAGATACGTGGGCCATAAGCATCTTCTGGA...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACTCAGGAGACTGAGGTaGGAGGGTCACTTAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTLRRLR*EGHLSP Trigger: TGGGCTTAAGTGACCCTCCCACCTCAGTCTCCTGAG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAAAATCTGAGACATCCTaGCTCTCGAGCTCGCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTKSETS*LSSSPS Trigger: GGAAGGCGAGCTCGAGAGTCAGGATGTCTCAGATTT...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAACACAGAGGTGCCAGTaGTGGACTGGATCAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTTQRCQ*WTGSAF Trigger: AAAGGCTGATCCAGTCCATCACTGGCACCTCTGTGT...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCAGCTAGACAGAAAATaGATACACCTAGGGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLQLDRK*IHLGQV Trigger: AACTTGCCCTAGGTGTATTCATTTTCTGTCTAGCTG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTTTATTCTGCTATTCCTaGCATTACCGCATCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLFCYS*HYRILH Trigger: ATGAAGGATGCGGTAATGGCAGGAATAGCAGAATAA...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGTGCCAGTGATGGACTaGATCAGCCTTTTGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTVPVMD*ISLLMA Trigger: AGCCATCAAAAGGCTGATCCAGTCCATCACTGGCAC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACTACTTCTTTCACCCTaGGCTTCTTCTACCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTLLLSP*ASSTTS Trigger: GGAGGTGGTAGAAGAAGCCCAGGGTGAAAGAAGTAG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACATGCCTTAGGGAAAGCTaGGCGGCGATACATTTCATA | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTCLRES*AAIHFI Trigger: TATGAAATGTATCGCCGCTCAGCTTTCCCTAAGGCA...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGAAAGGTTTTCTCTCTaGAAGCAGTTCCCCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTERFSL*KQFPCP Trigger: TGGACAGGGGAACTGCTTTCAGAGAGAAAACCTTTC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACATTTCAAGTCCACATCTaGGTCTCCGTCAGTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTFQVHI*VSVSFL Trigger: GAGGAAACTGACGGAGACGCAGATGTGGACTTGAAA...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACATCCAGAAGATGCTTATaGCCCACGTATCTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTSRRCL*PTYLLP Trigger: TGGAAGAAGATACGTGGGCCATAAGCATCTTCTGGA...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR TCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACAGCTAGACAGAAAATaGATACACCTAGGGCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTQLDRK*IHLGQV Trigger: AACTTGCCCTAGGTGTATTCATTTTCTGTCTAGCTG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACATTATTCTGCTATTCCTaGCATTACCGCATCCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTLFCYS*HYRILH Trigger: ATGAAGGATGCGGTAATGGCAGGAATAGCAGAATAA...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR GCA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGGTCACCCCTGTGATTaGTTTTCTTGTATCTTTACT | + |
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Preference number: 4 (lower is better) Translates to: NQATYFLGVTNIRVLRKTGHPCD*FSCIFT Trigger: AGTAAAGATACAAGAAAAGCAATCACAGGGGTGACC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000650109.1 |
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| CDS CCA 90 bp | TGCAGCTTCTTTCAAGTCCACATCTGCGTCTCCGTCAGTTTCCTCTaGGATTCCATCGGTGTCGGTAGCCCCCGGGTCCCCGGGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: CSFFQVHICVSVSFL*DSIGVGSPRVPGHS Trigger: GCTGTGCCCGGGGACCCGGGGGCTACCGACACCGATGGAATCCCAGAGGAAACTGACGGAGACGCAGATGTGGACTTGAAAGAAGCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS GCA 90 bp | TCGTCCATCACGGATAGGATTGGAGGGGAGAGGAGATCGCGGAGATaGCTGAGGCAGAAGCTCGGAAACCCGAGCTGCACAGGCCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: SSITDRIGGERRSRR*LRQKLGNPSCTGQD Trigger: ATCCTGGCCTGTGCAGCTCGGGTTTCCGAGCTTCTGCCTCAGGCATCTCCGCGATCTCCTCTCCCCTCCAATCCTATCCGTGATGGACGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000420584.3 |
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| CDS GCA 90 bp | AGGAGATCGCGGAGATGCCTGAGGCAGAAGCTCGGAAACCCGAGCTaGACAGGCCAGGATCTTACTTCCTGTCGTCGCGCAGCGATGACA | + |
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Preference number: 5 (lower is better) Translates to: RRSRRCLRQKLGNPS*TGQDLTSCRRAAMT Trigger: TGTCATCGCTGCGCGACGACAGGAAGTAAGATCCTGGCCTGTGCAGCTCGGGTTTCCGAGCTTCTGCCTCAGGCATCTCCGCGATCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420584.3 |
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| CDS GCA 90 bp | CTCGAGCTCGCCTTCCTCCGCTGCAGCTTCTTTCAAGTCCACATCTaGGTCTCCGTCAGTTTCCTCTGGGATTCCATCGGTGTCGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LELAFLRCSFFQVHI*VSVSFLWDSIGVGS Trigger: GCTACCGACACCGATGGAATCCCAGAGGAAACTGACGGAGACGCAGATGTGGACTTGAAAGAAGCTGCAGCGGAGGAAGGCGAGCTCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCCTGTCTCTCCACCTTaGTCGGAGGGCGACTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLPVSPP*SEGDSW Trigger: CCACGAGTCGCCCTCCGACAAAGGTGGAGAGACAGG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCCATCACGGATAGGATaGGAGGGGAGAGGAGATCGC | + |
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Preference number: 5 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLPSRIG*EGRGDR Trigger: GCGATCTCCTCTCCCCTCCAATCCTATCCGTGATGG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACCTGTCTCTCCACCTTaGTCGGAGGGCGACTCGTGG | + |
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Preference number: 5 (lower is better) Translates to: NQATYFLGVTNIRVLRKTPVSPP*SEGDSW Trigger: CCACGAGTCGCCCTCCGACAAAGGTGGAGAGACAGG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTTCCCCGACGAAAACCTaGGAAATACCAGACATAGCA | + |
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Preference number: 5 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLSPTKT*EIPDIA Trigger: TGCTATGTCTGGTATTTCCAAGGTTTTCGTCGGGGA...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000361288.9 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTGCTTCCCTCATATGTTaGGGTTGTAGTGGTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLASLIC*GCSGGI Trigger: AATGCCACCACTACAACCCAAACATATGAGGGAAGC...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACACACATCCAGTGCCTTTaGATGGCTGCCTTAGGGAAA | + |
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Preference number: 5 (lower is better) Translates to: NQATYFLGVTNIRVLRKTHIQCL*MAALGK Trigger: TTTCCCTAAGGCAGCCATCAAAAGGCACTGGATGTG...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420584.3 |
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| CDS-3UTR CAA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAGCTTCCCTCATATGTTaGGGTTGTAGTGGTGGCATT | + |
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Preference number: 5 (lower is better) Translates to: NQATYFLGVTNIRVLRKTASLIC*GCSGGI Trigger: AATGCCACCACTACAACCCAAACATATGAGGGAAGC...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | CAGTCTTATAGGAAGTCTGGAACCAATACTTCTTCCGTCAGTAACATAGGCCTTCTTGTATCTTTACTTTaGGCAGCAGAAATGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QSYRKSGTNTSSVSNIGLLVSLL*AAEMSK Trigger: TTTGCTCATTTCTGCTGCCAAAAGTAAAGATACAAG...AAGGCCTATGTTACTGACGGAAGAAGTATTGGTTCCAGACTTCCTATAAGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650109.1 |
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| CDS GCA 90 bp | TTTCTTGTATCTTTACTTTTGGCAGCAGAAATGAGCAAAGTCCACTaGAGAAAATACAAAGTCTACTTCTTTCACCCTGGGCTTCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: FLVSLLLAAEMSKVH*RKYKVYFFHPGLLL Trigger: TAGAAGAAGCCCAGGGTGAAAGAAGTAGACTTTGTATTTTCTGCAGTGGACTTTGCTCATTTCTGCTGCCAAAAGTAAAGATACAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650109.1 |
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| CDS-3UTR CAA 90 bp | AATCAGGCTACATACTTTCTAGGTGTGACAAATATCAGAGTTTTGAGAAAGACAAGAAGAAACCAGGATTaGCATCTTCTGAATCTCATC | + |
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Preference number: 5 (lower is better) Translates to: NQATYFLGVTNIRVLRKTRRNQD*HLLNLI Trigger: GATGAGATTCAGAAGATGCAAATCCTGGTTTCTTCT...TGTCTTTCTCAAAACTCTGATATTTGTCACACCTAGAAAGTATGTAGCCTGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS CCA 72 bp | TCCCCTGTCTCTCCACCTTTGTCGGAGGGCGACTCGTaGGCATCGTCCATCACGGATAGGATTGGAGGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPVSPPLSEGDS*ASSITDRIGGE Trigger: CTCCCCTCCAATCCTATCCGTGATGGACGATGCCCACGAGTCGCCCTCCGACAAAGGTGGAGAGACAGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS GCA 72 bp | GCCTTCCTCCGCTGCAGCTTCTTTCAAGTCCACATCTaGGTCTCCGTCAGTTTCCTCTGGGATTCCATCGGT | + |
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Preference number: 6 (lower is better) Translates to: AFLRCSFFQVHI*VSVSFLWDSIG Trigger: ACCGATGGAATCCCAGAGGAAACTGACGGAGACGCAGATGTGGACTTGAAAGAAGCTGCAGCGGAGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000361288.9 ENST00000420584.3 ENST00000650109.1 |
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| CDS TCA 72 bp | CATCCAGTGCCTTTTGATGGCTGCCTTAGGGAAAGCTaGGCGGCGATACATTTCATAACGGTTCAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: HPVPFDGCLRES*AAIHFITVQLL Trigger: GAGCAGCTGAACCGTTATGAAATGTATCGCCGCTCAGCTTTCCCTAAGGCAGCCATCAAAAGGCACTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420584.3 |
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