RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TADA2B (Homo sapiens)

Ensembl gene IDs: ENSG00000173011

Ensembl transcript IDs: ENST00000310074.8, ENST00000506692.1, ENST00000510704.1, ENST00000512388.1, ENST00000515646.1

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGACGGCTCTTaGCTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCCTGGCGACAC +
Preference number: 1 (lower is better)
Translates to: RAPPEPPPANWSDGS*LASLRPQLARAWRH
Trigger: GTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp CCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTaGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCTGGCG +
Preference number: 1 (lower is better)
Translates to: PPGLPRAPPEPPPAN*SDGSCLASLRPQLA
Trigger: CGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp AACCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTaGGGCCTCAGCTGGCGCGGGCCTGGCGACACTCTTACAGATGCC +
Preference number: 1 (lower is better)
Translates to: NHRQPTGQTALAWLV*GLSWRGPGDTLTDA
Trigger: GGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp GACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCCTaGCGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCA +
Preference number: 1 (lower is better)
Translates to: DGSCLASLRPQLARA*RHSYRCLLARRACS
Trigger: TGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp GGGCAGCGTGGGCTCAGAAAACGGGAGCCTGCAGGCAGCCCCGCCTaGGAAGAGCTTGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGT +
Preference number: 1 (lower is better)
Translates to: GQRGLRKREPAGSPA*EELVSPGNSWWLAG
Trigger: ACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTGAGCCCACGCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 90 bp GAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTaGTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCA +
Preference number: 1 (lower is better)
Translates to: EGLAVHTCPTSLPLT*FPIRGDVVTMGACP
Trigger: TGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp CACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTaGGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTA +
Preference number: 1 (lower is better)
Translates to: HSRLNSSTEQPRKMD*EGLAVHTCPTSLPL
Trigger: TAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp CCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTaGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCT +
Preference number: 1 (lower is better)
Translates to: PHVSYVPPTNVLSHS*GRGHYGSLPKRHGS
Trigger: AGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp TGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTaGACCAGCAGGCTCTGGCCGTATTCAAATGGGGCGCAGGGTCAG +
Preference number: 1 (lower is better)
Translates to: WSLWEPAQEARLYPK*TSRLWPYSNGAQGQ
Trigger: CTGACCCTGCGCCCCATTTGAATACGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp AAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATaGACTGAGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCC +
Preference number: 1 (lower is better)
Translates to: KCTHVLTAAPSSPGK*TERAWRSTRVLRPS
Trigger: GGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 90 bp CTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTaGCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTG +
Preference number: 1 (lower is better)
Translates to: LTCFPIRGDVVTMGA*PRGTALPKVNQQAL
Trigger: CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp GGCTCTGGCCGTATTCAAATGGGGCGCAGGGTCAGCTTTGGGGTTTaGGAACTGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGT +
Preference number: 1 (lower is better)
Translates to: GSGRIQMGRRVSFGV*ELHAETAAAGEMEG
Trigger: ACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp GCTCGCTGCACCCTGCCGCACACCATTTTGATTCAGGAGGCCAGGTaGGGCCTGCGCGTCTGCATTCTAACAAACAAGTTGCTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: ARCTLPHTILIQEAR*GLRVCILTNKLLLL
Trigger: CAGCAGCAGCAACTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAATCAAAATGGTGTGCGGCAGGGTGCAGCGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
3UTR GCA 90 bp GCCGTATTCAAATGGGGCGCAGGGTCAGCTTTGGGGTTTGGGAACTaGACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTGG +
Preference number: 1 (lower is better)
Translates to: AVFKWGAGSALGFGN*TLKLLPPVKWKVIW
Trigger: CCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCCCCATTTGAATACGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 90 bp AGTCTGAGGCCTCAGCTGGCGCGGGCCTGGCGACACTCTTACAGATaGCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGAAAGGT +
Preference number: 1 (lower is better)
Translates to: SLRPQLARAWRHSYR*LLARRACSYFQWKG
Trigger: ACCTTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp CAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTTaGAGAACGGAGCGCTGGAGTCTGAGCACGCCAAAGACTCTCTTT +
Preference number: 1 (lower is better)
Translates to: QSLGTYGAREASQPP*RTERWSLSTPKTLF
Trigger: AAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp TCCTCTTCAGTTCCCAACAAAACGCCAGCCTGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACACAGCGGAGGAGTCTGGGCCCAAGC +
Preference number: 1 (lower is better)
Translates to: SSSVPNKTPACCPLA*FSSSATQRRSLGPS
Trigger: GCTTGGGCCCAGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAACTGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp CCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTaGGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAG +
Preference number: 1 (lower is better)
Translates to: PERQVNLLEERSAGV*ARQRLSLKQGLGPE
Trigger: CTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp CAGATTCCTCTTCAGTTCCCAACAAAACGCCAGCCTGTTGTCCTCTaGCCTGATTTTCCTCATCTGCTACACAGCGGAGGAGTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: QIPLQFPTKRQPVVL*PDFPHLLHSGGVWA
Trigger: GGCCCAGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAACTGAAGAGGAATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp TTGGGGTTTGGGAACTGCACGCTGAAACTGCTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTGTGTTCAACAGATTCCTCTTCAGTT +
Preference number: 1 (lower is better)
Translates to: LGFGNCTLKLLPPVK*KVIWSLCSTDSSSV
Trigger: AACTGAAGAGGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 90 bp AACTGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGATTCCTCTTCAGTTCCCAACAAAACG +
Preference number: 1 (lower is better)
Translates to: NCTLKLLPPVKWKVI*SLCSTDSSSVPNKT
Trigger: CGTTTTGTTGGGAACTGAAGAGGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp AAGCTCCCAACTGAACGGGTAAAGGCGGAGCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCA +
Preference number: 1 (lower is better)
Translates to: KLPTERVKAEHHRSV*LAGTHLKYTHLLPP
Trigger: TGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGTTCAGTTGGGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 90 bp ACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGAACCCTaGGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAG +
Preference number: 1 (lower is better)
Translates to: TPKTLFKAGSWTREP*AAGRQKTSSSFRRK
Trigger: CTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAGGGTTCTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGGCAGGCAGCCCCGCCTaGGAAGAGCTTGTGTCACCA +
Preference number: 2 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQAGSPA*EELVSP
Trigger: TGGTGACACAAGCTCTTCTCAGGCGGGGCTGCCTGC...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGTGCCCGGGGCTGCGCTaGGGTCAGCTGTGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTCPGLR*GQLWAA
Trigger: CGCTGCCCACAGCTGACCCCAGCGCAGCCCCGGGCA...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATGCCCCCATGTAAAGTaGCGCGTGCCCGGGGCTGCG +
Preference number: 2 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPCPHVK*RVPGAA
Trigger: CGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGAGTCTGGGCCCAAGCTaGCCCCATGTAAAGTGCCGC +
Preference number: 2 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQSLGPS*PHVKCR
Trigger: GCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACT...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGCCATTCGTGGGGACGTaGTCACTATGGGAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQPFVGT*SLWEPA
Trigger: GGCAGGCTCCCATAGTGACCACGTCCCCACGAATGG...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGTCCCTCCCACTAACGTaGTTTCCCATTCGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQSLPLT*FPIRGD
Trigger: GTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGA...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGCTGGCCGTATTCAAATaGGGCGCAGGGTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQLAVFK*GAGSAL
Trigger: CAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAG...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTGCCCGGGGCTGCGCTaGGGTCAGCTGTGGGCAGCG +
Preference number: 2 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDCPGLR*GQLWAA
Trigger: CGCTGCCCACAGCTGACCCCAGCGCAGCCCCGGGCA...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 90 bp GGCTCAGAAAACGGGAGCCTGCAGGCAGCCCCGCCTGAGAAGAGCTaGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAA +
Preference number: 2 (lower is better)
Translates to: GSENGSLQAAPPEKS*CHQEIAGGLRVQQE
Trigger: TTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCAGCTGTGGGCAGCGTaGGCTCAGAAAACGGGAGCC +
Preference number: 2 (lower is better)
Translates to: TMGACPRGTALPKVNQQAQLWAA*AQKTGA
Trigger: GGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCTG...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAACTGCTGCCGCCGGTaGAATGGAAGGTCATCTGGT +
Preference number: 2 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPNCCRR*NGRSSG
Trigger: ACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTT...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGATGCCCCCATGTAAAGTaGCGCGTGCCCGGGGCTGCG +
Preference number: 2 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRCPHVK*RVPGAA
Trigger: CGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCA...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGAGCGCAGGGTCAGCTTTaGGGTTTGGGAACTGCACGC +
Preference number: 2 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGAQGQL*GLGTAR
Trigger: GCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGC...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 90 bp AACCAGCAGGCTCTGGCCGTATTCAAATGGGGCGCAGGGTCAGCTTaGGGGTTTGGGAACTGCACGCTGAAACTGCTGCCGCCGGTGAAA +
Preference number: 2 (lower is better)
Translates to: NQQALAVFKWGAGSA*GFGNCTLKLLPPVK
Trigger: TTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAGAGCCTGCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp GTTCTTCCAAGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGCGGCTCTACCCAAAGTaGACCAGCAGGCTCTGGCCG +
Preference number: 2 (lower is better)
Translates to: VLPSEMHSRLNSSTEQPRRLYPK*TSRLWP
Trigger: CGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCG...CCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTCCATTCGTGGGGACGTaGTCACTATGGGAGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GGKQSLGTYGAREASQPPPFVGT*SLWEPA
Trigger: GGCAGGCTCCCATAGTGACCACGTCCCCACGAATGG...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGTGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACA +
Preference number: 2 (lower is better)
Translates to: PPPANWSDGSCLASLRPQCCPLA*FSSSAT
Trigger: TGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACA...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCCAGAAAACGGGAGCCTaGAGGCAGCCCCGCCTGAGA +
Preference number: 2 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGQKTGA*RQPRLR
Trigger: TCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTG...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGATTGGGGTTTGGGAACTaGACGCTGAAACTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGLGFGN*TLKLLP
Trigger: CGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAA...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 90 bp ACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTaGAAGAACGGAGCGCTGGAGTCTGAGCACGCCAAAGACTCTCTT +
Preference number: 2 (lower is better)
Translates to: TVSWYLRGPRGKSTS*KNGALESEHAKDSL
Trigger: AAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACA +
Preference number: 2 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPCCPLA*FSSSAT
Trigger: TGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp TGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTGGTCGCTGTGTTCACCAGGAAATAGCTaGTGGCTTGCGGGTCCAGCA +
Preference number: 2 (lower is better)
Translates to: CTLKLLPPVKWKVIWSLCSPGNS*WLAGPA
Trigger: TGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA...ACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGCACAGCGGAGGAGTCTaGGCCCAAGCTGCCCCCATG +
Preference number: 2 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVHSGGV*AQAAPM
Trigger: CATGGGGGCAGCTTGGGCCCAGACTCCTCCGCTGTG...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGCGCAGGGTCAGCTTTaGGGTTTGGGAACTGCACGC +
Preference number: 2 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRAQGQL*GLGTAR
Trigger: GCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGC...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCACAGCTGGCGCGGGCCTaGCGACACTCTTACAGATGC +
Preference number: 2 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPQLARA*RHSYRC
Trigger: GCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTG...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGCTGATTTTCCTCATCTaGTACACAGCGGAGGAGTCT +
Preference number: 2 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSLIFLI*YTAEES
Trigger: AGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAG...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCTGGTCAGACGGCTCTTaGCTGGCTAGTCTGAGGCCT +
Preference number: 2 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGWSDGS*LASLRP
Trigger: AGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCA...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGCAGCTGTGGGCAGCGTaGGCTCAGAAAACGGGAGCC +
Preference number: 2 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVQLWAA*AQKTGA
Trigger: GGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCTG...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp ATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: ILGGKQSLGTYGAREASQLPPVK*KVIWSL
Trigger: CAGCGACCAGATGACCTTCCATTTCACCGGCGGCAG...TTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTGTCAGCTTTGGGGTTTaGGAACTGCACGCTGAAACT +
Preference number: 2 (lower is better)
Translates to: TMGACPRGTALPKVNQQAVSFGV*ELHAET
Trigger: AGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGAC...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCACTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTG +
Preference number: 2 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPLPPVK*KVIWSL
Trigger: CAGCGACCAGATGACCTTCCATTTCACCGGCGGCAG...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAATGGACTGAGAGGGCCTaGCGGTCCACACGTGTCCTA +
Preference number: 2 (lower is better)
Translates to: DILERGPQRKTCRQGWEEWTERA*RSTRVL
Trigger: TAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCA...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 2 (lower is better)
Translates to: PPPANWSDGSCLASLRPQHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CTAACAAACAAGTTGCTGCTGCTGGGCCAGGAGCCCCACCTTGAGAACCACTGGCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTA +
Preference number: 2 (lower is better)
Translates to: LTNKLLLLGQEPHLENHWHHRSV*LAGTHL
Trigger: TAAGTGAGTTCCTGCGAGTCATACACTGCGATGATG...CCAGTGGTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
3UTR-3UTR GCA 90 bp CGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGTTGGGGTTTGGGAACTaGACGCTGAAACTGCTGCCG +
Preference number: 2 (lower is better)
Translates to: RHSYRCLLARRACSYFQWLGFGN*TLKLLP
Trigger: CGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAA...CCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp ATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAATCCCCCAAGTCATTTTaGCTGGCACACTGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: ILGGKQSLGTYGAREASQSPKSF*LAHCLS
Trigger: GCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGA...TTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCCCAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAACACTCAAAAGGAAATaGTCCAATCTCACAATAAGC +
Preference number: 2 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPTLKRK*SNLTIS
Trigger: GCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGT...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGACAGCCTGTTGTCCTCTaGCCTGATTTTCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRQPVVL*PDFPHL
Trigger: CAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTG...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR GCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGACTAGCCAGGCGGGCATaGTCATATTTTCAGTGGAAA +
Preference number: 2 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRLARRA*SYFQWK
Trigger: TTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAG...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 2 (lower is better)
Translates to: TMGACPRGTALPKVNQQAHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGAT +
Preference number: 2 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDKWKVI*SLCSTD
Trigger: ATCTGTTGAACACAGCGACCAGATGACCTTCCATTT...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 90 bp CCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGAAAGGTACTaGCAACTGAAGAAAATCCTGAGGAAGCTGACGCCAGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: PTSQAGMLIFSVERY*QLKKILRKLTPEFR
Trigger: TCTGAATTCTGGCGTCAGCTTCCTCAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGGGCTGGCACACTGTCTaGGCATCACCCTGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKGWHTV*ASPWLS
Trigger: TGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCC...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
3UTR-3UTR CCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGTGCTTTCCCATTCGTaGGGACGTGGTCACTATGGG +
Preference number: 2 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYVLSHS*GRGHYG
Trigger: CCCATAGTGACCACGTCCCCACGAATGGGAAAGCAC...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCACACTCAAAAGGAAATaGTCCAATCTCACAATAAGC +
Preference number: 2 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGTLKRK*SNLTIS
Trigger: GCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGT...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGAT +
Preference number: 2 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVKWKVI*SLCSTD
Trigger: ATCTGTTGAACACAGCGACCAGATGACCTTCCATTT...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp CACTTTAATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTCTGGCCGTATTCAAATaGGGCGCAGGGTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: HFNVTSSPNILGGKQSLGLAVFK*GAGSAL
Trigger: CAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAG...ACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR TCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGGCTGGCACACTGTCTaGGCATCACCCTGGCTTTCA +
Preference number: 2 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIGWHTV*ASPWLS
Trigger: TGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCC...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
3UTR-3UTR TCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 2 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
3UTR-3UTR TCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTACATCATCGCAGTGTATaGCTCGCAGGAACTCACTTA +
Preference number: 2 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVHHRSV*LAGTHL
Trigger: TAAGTGAGTTCCTGCGAGTCATACACTGCGATGATG...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTTCCCCCAAGTCATTTTaGCTGGCACACTGTCTGAGC +
Preference number: 2 (lower is better)
Translates to: IHTFASPMIQYKIVTIASSPKSF*LAHCLS
Trigger: GCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGA...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
3UTR GCA 72 bp CCAGAACCACCGCCAGCCAACTGGTCAGACGGCTCTTaGCTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCC +
Preference number: 3 (lower is better)
Translates to: PEPPPANWSDGS*LASLRPQLARA
Trigger: GGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 72 bp TCATCTGCTACACAGCGGAGGAGTCTGGGCCCAAGCTaGCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCG +
Preference number: 3 (lower is better)
Translates to: SSATQRRSLGPS*PHVKCRVPGAA
Trigger: CGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTCCGCTGTGTAGCAGATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp CAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTaGGGCCTCAGCTGGCGCGGGCCTGGCGACACTCTT +
Preference number: 3 (lower is better)
Translates to: QPTGQTALAWLV*GLSWRGPGDTL
Trigger: AAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp TGCCTGGCTAGTCTGAGGCCTCAGCTGGCGCGGGCCTaGCGACACTCTTACAGATGCCTACTAGCCAGGCGG +
Preference number: 3 (lower is better)
Translates to: CLASLRPQLARA*RHSYRCLLARR
Trigger: CCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp CTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTaGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: LPRAPPEPPPAN*SDGSCLASLRP
Trigger: AGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCCCGCCTGAGAAGAGCTaGTGTCACCAGGAAATAGCT +
Preference number: 3 (lower is better)
Translates to: EESGPKLPPCKVPRARGCPPEKS*CHQEIA
Trigger: AGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGG...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp CTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTaGGAGGGCCTGGCGGTCCACACGTGTCCTACGTCC +
Preference number: 3 (lower is better)
Translates to: LNSSTEQPRKMD*EGLAVHTCPTS
Trigger: GGACGTAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp TGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTaGACCAGCAGGCTCTGGCCGTATTCAAATGGGGCG +
Preference number: 3 (lower is better)
Translates to: WEPAQEARLYPK*TSRLWPYSNGA
Trigger: CGCCCCATTTGAATACGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp GGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTTaGAGAACGGAGCGCTGGAGTCTGAGCACGCCAAAG +
Preference number: 3 (lower is better)
Translates to: GTYGAREASQPP*RTERWSLSTPK
Trigger: CTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp CACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATaGACTGAGAGGGCCTGGCGGTCCACACGTGTCCTA +
Preference number: 3 (lower is better)
Translates to: HVLTAAPSSPGK*TERAWRSTRVL
Trigger: TAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSLPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCACTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPLPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTGGCGCAGGGTCAGCTTaGGGGTTTGGGAACTGCACG +
Preference number: 3 (lower is better)
Translates to: GGKQSLGTYGAREASQPPGAGSA*GFGNCT
Trigger: CGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCC...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 72 bp GCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTaGTTTCCCATTCGTGGGGACGTGGTCACTATGGGA +
Preference number: 3 (lower is better)
Translates to: AVHTCPTSLPLT*FPIRGDVVTMG
Trigger: TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 72 bp CCTCAGCTGGCGCGGGCCTGGCGACACTCTTACAGATaGCTACTAGCCAGGCGGGCATGCTCATATTTTCAG +
Preference number: 3 (lower is better)
Translates to: PQLARAWRHSYR*LLARRACSYFQ
Trigger: CTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp TCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTaGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: SYVPPTNVLSHS*GRGHYGSLPKR
Trigger: CCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp CGTATTCAAATGGGGCGCAGGGTCAGCTTTGGGGTTTaGGAACTGCACGCTGAAACTGCTGCCGCCGGTGAA +
Preference number: 3 (lower is better)
Translates to: RIQMGRRVSFGV*ELHAETAAAGE
Trigger: TTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCCCCATTTGAATACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACAAAACGCCAGCCTGTaGTCCTCTGGCCTGATTTTC +
Preference number: 3 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGQNASL*SSGLIF
Trigger: GAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTG...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR GCA 72 bp ATTTTGATTCAGGAGGCCAGGTGGGGCCTGCGCGTCTaGATTCTAACAAACAAGTTGCTGCTGCTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: ILIQEARWGLRV*ILTNKLLLLGQ
Trigger: CTGGCCCAGCAGCAGCAACTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAATCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
3UTR CCA 72 bp GGGAACTGCACGCTGAAACTGCTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTGTGTTCAACAGATTCC +
Preference number: 3 (lower is better)
Translates to: GNCTLKLLPPVK*KVIWSLCSTDS
Trigger: GGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCAGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp ACCCTGCCGCACACCATTTTGATTCAGGAGGCCAGGTaGGGCCTGCGCGTCTGCATTCTAACAAACAAGTTG +
Preference number: 3 (lower is better)
Translates to: TLPHTILIQEAR*GLRVCILTNKL
Trigger: CAACTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAATCAAAATGGTGTGCGGCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
3UTR TCA 72 bp GTTCCCAACAAAACGCCAGCCTGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACACAGCGGAGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: VPNKTPACCPLA*FSSSATQRRSL
Trigger: CAGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp CTTCAGTTCCCAACAAAACGCCAGCCTGTTGTCCTCTaGCCTGATTTTCCTCATCTGCTACACAGCGGAGGA +
Preference number: 3 (lower is better)
Translates to: LQFPTKRQPVVL*PDFPHLLHSGG
Trigger: TCCTCCGCTGTGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTGTTGGGAACTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CCA 72 bp CTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGATTCCTCTTCAGTTCCC +
Preference number: 3 (lower is better)
Translates to: LKLLPPVKWKVI*SLCSTDSSSVP
Trigger: GGGAACTGAAGAGGAATCTGTTGAACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp CAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTaGGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: QVNLLEERSAGV*ARQRLSLKQGL
Trigger: AAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTTCAGAACTCTTAGCCTaGAACTTTGTACAATGGGTT +
Preference number: 3 (lower is better)
Translates to: GGKQSLGTYGAREASQPPSELLA*NFVQWV
Trigger: AACCCATTGTACAAAGTTCAAGGCTAAGAGTTCTGA...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR-3UTR CAA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 3 (lower is better)
Translates to: CMTRRNSLKIHTFASPMILPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
3UTR TCA 72 bp ACTGAACGGGTAAAGGCGGAGCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTAAAATACACACATTTG +
Preference number: 3 (lower is better)
Translates to: TERVKAEHHRSV*LAGTHLKYTHL
Trigger: CAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp GCTTTTGTACCAAAGAGAAGAACACTCAAAAGGAAATaGTCCAATCTCACAATAAGCTCCCAACTGAACGGG +
Preference number: 3 (lower is better)
Translates to: AFVPKRRTLKRK*SNLTISSQLNG
Trigger: CCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTTCTTCTCTTTGGTACAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR TCA 72 bp GGAACTCACTTAAAATACACACATTTGCTTCCCCCATaGTCCAATATAAGATTGTTACTATTGCTTCTTTCA +
Preference number: 3 (lower is better)
Translates to: GTHLKYTHLLPP*SNIRLLLLLLS
Trigger: TGAAAGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCCCCGGAAAATGGACTaGGAGGGCCTGGCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGPRKMD*EGLAVH
Trigger: GTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCAGCTGGCGCGGGCCTaGCGACACTCTTACAGATGC +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGQLARA*RHSYRC
Trigger: GCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCCACCGCCAGCCAACTaGTCAGACGGCTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGPPPAN*SDGSCL
Trigger: CAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGTGCGCACTCATTCCCTaGCCACCGCCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGCALIP*PPPLSH
Trigger: GTGGCTGAGAGGCGGTGGCCAGGGAATGAGTGCGCA...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCACCTTCTCGCGATCTaGCAGGAGCTCGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGHLLAI*QELEAW
Trigger: CCAGGCTTCGAGCTCCTGTCAGATCGCGAGAAGGTG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCCAGGACACCTCTGTaGCGCTTGTCCTGGCCGCAC +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCARTPL*RLSWPH
Trigger: GTGCGGCCAGGACAAGCGTCACAGAGGTGTCCTGGC...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCACAAGGTCTTGGGGTaGGCTGGTGGCAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGHKVLG*AGGRAE
Trigger: CTCAGCTCTGCCACCAGCTCACCCCAAGACCTTGTG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGACCCGGGCTCCCTCGTaGTCCACCAGAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQTRAPS*STRTTA
Trigger: GGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGT...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCAGGCAGCCCCGCCTaGGAAGAGCTTGTGTCACCA +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCAGSPA*EELVSP
Trigger: TGGTGACACAAGCTCTTCTCAGGCGGGGCTGCCTGC...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGGTCTGTCACGCGGTTaGGGATGGTGTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCGLSRG*GWCRGC
Trigger: GCATCCCCGACACCATCCCCAACCGCGTGACAGACC...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGLPPVK*KVIWSL
Trigger: CAGCGACCAGATGACCTTCCATTTCACCGGCGGCAG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGCTGCCTCTGCCCGCCTaGGTGTGGAACCAGCACTGC +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQLPLPA*VWNQHC
Trigger: GCAGTGCTGGTTCCACACCCAGGCGGGCAGAGGCAG...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGAGAGGGGGCCTCCGCTaGGACAGGTGTGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQRGGLR*DRCGLS
Trigger: TGACAGACCACACCTGTCCCAGCGGAGGCCCCCTCT...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGAGCCGAACTGCTCGATaGCGTCCAGCAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQSRTAR*RPAAAA
Trigger: AGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCT...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCCGCTGGGACAGGTGTaGTCTGTCACGCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPANWSDGSCLASLRPQPLGQV*SVTRLG
Trigger: CCCCAACCGCGTGACAGACCACACCTGTCCCAGCGG...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCCTGCCGCCGGTGAAATaGAAGGTCATCTGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCLPPVK*KVIWSL
Trigger: CAGCGACCAGATGACCTTCCATTTCACCGGCGGCAG...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGGGGACGTGGTCACTATaGGAGCCTGCCCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQGTWSL*EPAQEA
Trigger: TGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCC...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGTACCGTGGACATCCTTaGAAGAGGACCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGYRGHP*KRTPEK
Trigger: TTTCTCTGGGGTCCTCTTTCAAGGATGTCCACGGTA...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCCGACACTCTTACAGATaGCTACTAGCCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCRHSYR*LLARRA
Trigger: TGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCG...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CGGGGCCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTGAGCACTGCAGCGCTGCCTaGAGCACTGCCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGPRGKSTSLKNGALESEHCSAA*STARGP
Trigger: TGGGCCTCTGGCAGTGCTGCAGGCAGCGCTGCAGTG...CTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCAGCTGGCTGGGAGTCTaGCACTGGCTGAAAGCATTC +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCSWLGV*HWLKAF
Trigger: GAATGCTTTCAGCCAGTGGCAGACTCCCAGCCAGCT...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCTGATGACTATGAGCTaGCGTCTGGGAGAGAAGTGT +
Preference number: 4 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGLMTMS*RLGEKC
Trigger: ACACTTCTCTCCCAGACGCCAGCTCATAGTCATCAG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACTTGCCTGGCTAGTCTaGGGCCTCAGCTGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGLAWLV*GLSWRG
Trigger: CCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAG...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CGGGGCCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTGAGAGCAGCCCCGGAAAATaGACTGAGAGGGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RGPRGKSTSLKNGALESESSPGK*TERAWR
Trigger: CCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCT...CTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CGGGGCCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTGAGCCACCGCCAGCCAACTaGTCAGACGGCTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGPRGKSTSLKNGALESEPPPAN*SDGSCL
Trigger: CAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG...CTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCAGTGACTGCAGAAGATaGGCCTGTGGCTCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCSDCRR*ACGSSR
Trigger: CCTTGAAGAGCCACAGGCCCATCTTCTGCAGTCACT...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp ATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGCGGCTCTACCCAAAGTaGACCAGCAGGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: MGACPRGTALPKVNQQALRLYPK*TSRLWP
Trigger: CGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCG...CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCGGAGCGCTGGAGTCTaGGCACGCCAAAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSRSAGV*ARQRLS
Trigger: AGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCG...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCTGTCCTGGCACTCGGTaGAGCGGAAGCGCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFCPGTR*SGSAAG
Trigger: GCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACA...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGGGATGGTGTCGGGGATaGAGGCCTTCCCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSGWCRG*RPSPGS
Trigger: GGAACCTGGGGAAGGCCTGCATCCCCGACACCATCC...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGTCACGCGGTTGGGGATaGTGTCGGGGATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: MGACPRGTALPKVNQQALSRGWG*CRGCRP
Trigger: AGGCCTGCATCCCCGACACCATCCCCAACCGCGTGA...CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACACAGCGGAGGAGTCTaGGCCCAAGCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGHSGGV*AQAAPM
Trigger: CATGGGGGCAGCTTGGGCCCAGACTCCTCCGCTGTG...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGAGCAGCCCCGGAAAATaGACTGAGAGGGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTSSPGK*TERAWR
Trigger: CCGCCAGGCCCTCTCAGTCCATTTTCCGGGGCTGCT...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGAGCTGGGGCTTCCTCTaGCACACATGCCTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTSWGFL*HTCLEP
Trigger: CGGCTCCAGGCATGTGTGCCAGAGGAAGCCCCAGCT...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
3UTR CAA 72 bp GTGAAAACAGCTCGCTGCACCCTGCCGCACACCATTTaGATTCAGGAGGCCAGGTGGGGCCTGCGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VKTARCTLPHTI*IQEARWGLRVC
Trigger: GCAGACGCGCAGGCCCCACCTGGCCTCCTGAATCAAAATGGTGTGCGGCAGGGTGCAGCGAGCTGTTTTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR TCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACGGGCCCCCAGAGCGTaGAGCGCCCGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKRAPRA*SARRPP
Trigger: TGGTGGACGGCGGGCGCTTCACGCTCTGGGGGCCCG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR TCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCGGCTGGCACACTGTCTaGGCATCACCCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSGWHTV*ASPWLS
Trigger: TGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCC...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTA +
Preference number: 4 (lower is better)
Translates to: EESGPKLPPCKVPRARGCHHRSV*LAGTHL
Trigger: TAAGTGAGTTCCTGCGAGTCATACACTGCGATGATG...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATTTCCGAAGCCGAACTaGTCGATGGCGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPFPKPN*SMASSS
Trigger: GCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGAAA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCGCTGCCTCGTACTCTaGCGACTCTTCCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PPPANWSDGSCLASLRPQRCLVL*RLFHLG
Trigger: ACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCG...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATGGTCAGACGGCTCTTaGCTGGCTAGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPWSDGS*LASLRP
Trigger: AGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGTTCCTCTGGCACACATaGCTGGAGCCGAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTFLWHT*LEPRCW
Trigger: CCAGCACCTCGGCTCCAGGCATGTGTGCCAGAGGAA...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCCAGGAAATAGCTGGTaGCTTGCGGGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSPGNSW*LAGPAG
Trigger: TCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGG...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGAGGAGGAAGGTACCGTaGACATCCTTGAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQRRKVP*TSLKED
Trigger: GTCCTCTTTCAAGGATGTCCACGGTACCTTCCTCCT...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGACAAGTTGCTGCTGCTaGGCCAGGAGCCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTTSCCC*ARSPTL
Trigger: CAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGT...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTGGCTCCAGGAACGGATaGGATCCCACAGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQAGSRNG*DPTAGA
Trigger: AGCCCCAGCTGTGGGATCCCATCCGTTCCTGGAGCC...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGGAGCGCTGGAGTCTaGGCACGCCAAAGACTCTCT +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGRSAGV*ARQRLS
Trigger: AGAGAGTCTTTGGCGTGCTCAGACTCCAGCGCTCCG...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACGCTTGTGCCAGGGTGTaGGACCAGGCCAAGTCCACG +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHACARV*DQAKST
Trigger: CGTGGACTTGGCCTGGTCTCACACCCTGGCACAAGC...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCGGATGGTGTCGGGGATaGAGGCCTTCCCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFGWCRG*RPSPGS
Trigger: GGAACCTGGGGAAGGCCTGCATCCCCGACACCATCC...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp TGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTGGTCGCTGTGTCAGAAAACGGGAGCCTaGAGGCAGCCCCGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: CTLKLLPPVKWKVIWSLCQKTGA*RQPRLR
Trigger: TCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTG...ACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATTGGGGTTTGGGAACTaGACGCTGAAACTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPLGFGN*TLKLLP
Trigger: CGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGTCAGACGGCTCTTaGCTGGCTAGTCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSWSDGS*LASLRP
Trigger: AGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCA...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCGTTCCACCATCAGGGTaGCAGATTTGGGTTCCGCAC +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSVPPSG*QIWVPH
Trigger: GTGCGGAACCCAAATCTGGCACCCTGATGGTGGAAC...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTTCACGCGGTTGGGGATaGTGTCGGGGATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPSRGWG*CRGCRP
Trigger: AGGCCTGCATCCCCGACACCATCCCCAACCGCGTGA...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAATGCCCGGGGCTGCGCTaGGGTCAGCTGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: DILERGPQRKTCRQGWEECPGLR*GQLWAA
Trigger: CGCTGCCCACAGCTGACCCCAGCGCAGCCCCGGGCA...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACCATTCGTGGGGACGTaGTCACTATGGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGPFVGT*SLWEPA
Trigger: GGCAGGCTCCCATAGTGACCACGTCCCCACGAATGG...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCGTGCTTTCCCATTCGTaGGGACGTGGTCACTATGGG +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSVLSHS*GRGHYG
Trigger: CCCATAGTGACCACGTCCCCACGAATGGGAAAGCAC...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGGGAGAGAAGTGTTCTaGGCTCCAGGAACGGATGGG +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTGREVF*APGTDG
Trigger: CCCATCCGTTCCTGGAGCCCAGAACACTTCTCTCCC...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
3UTR CAA 72 bp TGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTaGAAGAACGGAGCGCTGGAGTCTGAGCACGCCAAA +
Preference number: 4 (lower is better)
Translates to: WYLRGPRGKSTS*KNGALESEHAK
Trigger: TTTGGCGTGCTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 72 bp AGGTGGGGCCTGCGCGTCTGCATTCTAACAAACAAGTaGCTGCTGCTGGGCCAGGAGCCCCACCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RWGLRVCILTNK*LLLGQEPHLEN
Trigger: GTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAGAATGCAGACGCGCAGGCCCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR TCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCCTTCTCCTCCTTGGTaGTCTTGCGCTTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQAPSPPW*SCASAP
Trigger: AGGCGCTGAAGCGCAAGATCACCAAGGAGGAGAAGG...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp ATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGGCCAGAACCCCTGGCTaGGGTTTGGACTTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: MGACPRGTALPKVNQQALARTPG*GLDFVL
Trigger: GAGAACAAAGTCCAAACCTCAGCCAGGGGTTCTGGC...CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTCACACACTGTCTTATaGGCTGGGCTCAGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSSHTVL*AGLRGE
Trigger: CTCTCCCCTGAGCCCAGCTCATAAGACAGTGTGTGA...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTCCGTTTATGCCGCGCTaGCTCGTACTCTGCCGACTC +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPPFMPR*LVLCRL
Trigger: GAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGG...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACCCGTTTATGCCGCGCTaGCTCGTACTCTGCCGACTC +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHPFMPR*LVLCRL
Trigger: GAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGG...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGCGAACTCGCTGTCTTTaGCGTCCTCCTTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTRTRCL*RPPFPV
Trigger: AACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCG...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CTAACAAACAAGTTGCTGCTGCTGGGCCAGGAGCCCCACCTTGAGAACCACTGGCAAACAAGTTGCTGCTaGTGGGCCAGGAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LTNKLLLLGQEPHLENHWQTSCC*WARSPT
Trigger: GGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTG...CCAGTGGTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCAGTAACTGCCCAAAGTaGGCACTCATTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSSNCPK*ALIPWP
Trigger: TGGCCAGGGAATGAGTGCGCACTTTGGGCAGTTACT...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGACCGCTGGGACAGGTGTaGTCTGTCACGCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRPLGQV*SVTRLG
Trigger: CCCCAACCGCGTGACAGACCACACCTGTCCCAGCGG...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTACGTACATGTCCACGTaGGCGCGCTTCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQATYMST*ARFSSI
Trigger: GATCGAGCTGAAGCGCGCCCACGTGGACATGTACGT...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATCCCCCAAGTCATTTTaGCTGGCACACTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPSPKSF*LAHCLS
Trigger: GCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTCACCAGGAAATAGCTaGTGGCTTGCGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSSPGNS*WLAGPA
Trigger: TGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCAGCTGTGGGCAGCGTaGGCTCAGAAAACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCQLWAA*AQKTGA
Trigger: GGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCTG...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCAGCTGGCGCGGGCCTaGCGACACTCTTACAGATGC +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCQLARA*RHSYRC
Trigger: GCATCTGTAAGAGTGTCGCCAGGCCCGCGCCAGCTG...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGAACTCTTCCATCTTGGTaGTCCCGTTTCGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGTLPSW*SRFAGT
Trigger: GGTACCGGCGAAACGGGATCACCAAGATGGAAGAGT...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCAAGCTGGTGGCAGAGCTaGGGCCAGAACCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPSWWQS*GQNPWL
Trigger: CAGCCAGGGGTTCTGGCCTCAGCTCTGCCACCAGCT...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCTGATTTTCCTCATCTaGTACACAGCGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: PPPANWSDGSCLASLRPQLIFLI*YTAEES
Trigger: AGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAG...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTGGTCGCTGTGTGTCACTATGGGAGCCTaGCCAAGAGGCACGGCTCTA +
Preference number: 4 (lower is better)
Translates to: CTLKLLPPVKWKVIWSLCVTMGA*PRGTAL
Trigger: TAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGAC...ACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGATCCCTCCCACTAACGTaGTTTCCCATTCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGSLPLT*FPIRGD
Trigger: GTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGA...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCGTCAGCTTTGGGGTTTaGGAACTGCACGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSVSFGV*ELHAET
Trigger: AGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGAC...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGGACGGGAATAGTCGATaGGCTAACAGGCAGCCAATC +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSDGNSR*ANRQPI
Trigger: GATTGGCTGCCTGTTAGCCCATCGACTATTCCCGTC...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTCTGGCACACATGCCTaGAGCCGAGGTGCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDSGTHA*SRGAGP
Trigger: GGGTCCAGCACCTCGGCTCCAGGCATGTGTGCCAGA...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTATGGGATCCCACAGCTaGGGCTTCCTCTGGCACACA +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPMGSHS*GFLWHT
Trigger: TGTGTGCCAGAGGAAGCCCCAGCTGTGGGATCCCAT...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp CTTGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCCCACGGTTAAGCAGCTaGCTGGGAGTCTGCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVSPGNSWWLAGPAGKHCPRLSS*LGVCHW
Trigger: CCAGTGGCAGACTCCCAGCCAGCTGCTTAACCGTGG...GCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTCAGAAGATGGGCCTGTaGCTCTTCAAGGGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPQKMGL*LFKGAG
Trigger: GCCTGCTCCCTTGAAGAGCCACAGGCCCATCTTCTG...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACCATGTTGCCACCCGCTaGAAAAGCAAGGGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHHVATR*KSKGQD
Trigger: GTCCTGGCCCTTGCTTTTCCAGCGGGTGGCAACATG...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGTGCCAGAGGCCCAGCTaGAACCAGAGGGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVCQRPS*NQRDRH
Trigger: GTGGCGGTCCCTCTGGTTTCAGCTGGGCCTCTGGCA...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CTTGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTTTCGCCGGTACCGCTaGAGTTCTCGGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LVSPGNSWWLAGPAGKHCFRRYR*SSRILA
Trigger: GGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAA...GCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCCGCTGCCTCGTACTCTaGCGACTCTTCCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFRCLVL*RLFHLG
Trigger: ACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCG...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGACGACACTCTTACAGATaGCTACTAGCCAGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGRHSYR*LLARRA
Trigger: TGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCG...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGGACTACAGAAGGCAGTaGCAAAACTCAACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSDYRRQ*QNSTVG
Trigger: GCCCACAGTTGAGTTTTGGCACTGCCTTCTGTAGTC...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGATTCCTAGGCAGTGACTaGAGAAGATGGGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGFLGSD*RRWACG
Trigger: GCCACAGGCCCATCTTCTGCAGTCACTGCCTAGGAA...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCCCAAGTCCACGGCACTaGAGGAGGGGACCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGPSPRH*RRGPSS
Trigger: AGAACTGGGTCCCCTCCTGCAGTGCCGTGGACTTGG...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp ATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGTACTGCCATAAACCCTaGACTCAGGGGCTGTCTGAA +
Preference number: 4 (lower is better)
Translates to: MGACPRGTALPKVNQQALYCHKP*TQGLSE
Trigger: TTCAGACAGCCCCTGAGTGCAGGGTTTATGGCAGTA...CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp CTTGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTTCTCATTCCCCACCTaGGACCAGAGGAGCCCACCT +
Preference number: 4 (lower is better)
Translates to: LVSPGNSWWLAGPAGKHCFSFPT*DQRSPP
Trigger: AGGTGGGCTCCTCTGGTCGCAGGTGGGGAATGAGAA...GCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGACACAGCTCGATGTCCTaGCACTCGGTGCAGCGGAAG +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRHSSMS*HSVQRK
Trigger: CTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTG...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGGAAGGTTCTCAATaGCGGCGAACTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQALEGSQ*RRTRCL
Trigger: AAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAG...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACACAGCGGAGGAGTCTaGGCCCAAGCTGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKHSGGV*AQAAPM
Trigger: CATGGGGGCAGCTTGGGCCCAGACTCCTCCGCTGTG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCCCCTGGCTGAGGTTTaGACTTTGTTCTCATTCCCC +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQAPLAEV*TLFSFP
Trigger: GGGGAATGAGAACAAAGTCCAAACCTCAGCCAGGGG...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAACTCCTTGCATGACATaGACTGGTACAGCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGTPCMT*TGTAAS
Trigger: TGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGT...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp ATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAAGGCTGGCACACTGTCTaGGCATCACCCTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: ILGGKQSLGTYGAREASQGWHTV*ASPWLS
Trigger: TGAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCC...TTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCCCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGCATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TGCACGCTGAAACTGCTGCCGCCGGTGAAATGGAAGGTCATCTGGTCGCTGTGTTCTGATTCAAGACAGTaGCAGAGAGCAGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: CTLKLLPPVKWKVIWSLCSDSRQ*QRAARG
Trigger: GCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGA...ACACAGCGACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTTTCAGCGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGATCTGATTCAAGACAGTaGCAGAGAGCAGCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGSDSRQ*QRAARG
Trigger: GCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGA...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTGCAAGTCAACCTCCTTaGAGAACGGAGCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCASQPP*RTERWS
Trigger: ACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGC...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTGCTCCATCACCTCTTaGGGAGTCCGGGAAGCACCA +
Preference number: 4 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDCSITS*GVREAP
Trigger: TGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCA...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAATCACGCGGTTGGGGATaGTGTCGGGGATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKSRGWG*CRGCRP
Trigger: AGGCCTGCATCCCCGACACCATCCCCAACCGCGTGA...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCCCTCCTTTCCCCGTTTaGAGCCGGCTAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFPPFPV*SRLGFC
Trigger: ACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGG...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CTAACAAACAAGTTGCTGCTGCTGGGCCAGGAGCCCCACCTTGAGAACCACTGGCTGGAAGGTTCTCAATaGCGGCGAACTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LTNKLLLLGQEPHLENHWLEGSQ*RRTRCL
Trigger: AAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAG...CCAGTGGTTCTCAAGGTGGGGCTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCTGCCCGGGGCTGCGCTaGGGTCAGCTGTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMICPGLR*GQLWAA
Trigger: CGCTGCCCACAGCTGACCCCAGCGCAGCCCCGGGCA...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GTTCTTCCAAGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGGTGCTTTCCCATTCGTaGGGACGTGGTCACTATGGG +
Preference number: 4 (lower is better)
Translates to: VLPSEMHSRLNSSTEQPRVLSHS*GRGHYG
Trigger: CCCATAGTGACCACGTCCCCACGAATGGGAAAGCAC...CCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACAATAGCTTTTGTACCCCTTCTCCTCCTTGGTaGTCTTGCGCTTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRVQQENTAPVTHNSFCTPSPPW*SCASAP
Trigger: AGGCGCTGAAGCGCAAGATCACCAAGGAGGAGAAGG...GGTACAAAAGCTATTGTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACACCTTCTCGCGATCTaGCAGGAGCTCGAAGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKHLLAI*QELEAW
Trigger: CCAGGCTTCGAGCTCCTGTCAGATCGCGAGAAGGTG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGATGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGCCPLA*FSSSAT
Trigger: TGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACA...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACCGCTGCCTCGTACTCTaGCGACTCTTCCATCTTGGT +
Preference number: 4 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDRCLVL*RLFHLG
Trigger: ACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCG...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGATTGGAGGGGATTCCTTaGCGCTTCTGGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRLEGIP*RFWRWS
Trigger: AGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAA...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACTCCCTCCCACTAACGTaGTTTCCCATTCGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDSLPLT*FPIRGD
Trigger: GTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGA...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGAGCCCACCTGGTACTaGCATAAACCCTGCACTCAG +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTREPTWY*HKPCTQ
Trigger: CTGAGTGCAGGGTTTATGGCAGTACCAGGTGGGCTC...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCGCTGCTCCTCGCGACTaGTCCAGCCGCCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASAAPRD*SSRPRP
Trigger: AGGCCGAGGGCGGCTGGACCAGTCGCGAGGAGCAGC...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp TTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACAATAGCTTTTGTACCACGTACATGTCCACGTaGGCGCGCTTCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: LRVQQENTAPVTHNSFCTTYMST*ARFSSI
Trigger: GATCGAGCTGAAGCGCGCCCACGTGGACATGTACGT...GGTACAAAAGCTATTGTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCACAGGAGCTCGAAGCCTaGAAGGTTCTCAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPQELEA*KVLNGG
Trigger: GCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTG...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACCAGCCTGTTGTCCTCTaGCCTGATTTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHQPVVL*PDFPHL
Trigger: CAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTG...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGAT +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPKWKVI*SLCSTD
Trigger: ATCTGTTGAACACAGCGACCAGATGACCTTCCATTT...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGGCGCAGGGTCAGCTTTaGGGTTTGGGAACTGCACGC +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVAQGQL*GLGTAR
Trigger: GCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGC...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGAAGGGACGTGGTCACTATaGGAGCCTGCCCAAGAGGCA +
Preference number: 4 (lower is better)
Translates to: WSLSTPKTLFKAGSWTREGTWSL*EPAQEA
Trigger: TGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCC...TTCTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
3UTR CAA 72 bp CTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTaGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: LQAQTFWEVNSL*VPTGPERQVNL
Trigger: GAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACCTTCTCCTCCTTGGTaGTCTTGCGCTTCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKPSPPW*SCASAP
Trigger: AGGCGCTGAAGCGCAAGATCACCAAGGAGGAGAAGG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp TTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACAATAGCTTTTGTACCGCAAGTCAACCTCCTTaGAGAACGGAGCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LRVQQENTAPVTHNSFCTASQPP*RTERWS
Trigger: ACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGC...GGTACAAAAGCTATTGTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACGAATCTCCAGGACTCTaGCTACAGAAGGCAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDESPGL*LQKAVP
Trigger: TGGCACTGCCTTCTGTAGTCAGAGTCCTGGAGATTC...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGATCAAGTTTAAAGAGCTaGAGAGCACCTTCTCGCGAT +
Preference number: 4 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGSSLKS*RAPSRD
Trigger: ATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGA...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCTGCCCCCATGTAAAGTaGCGCGTGCCCGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMICPHVK*RVPGAA
Trigger: CGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCA...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACCTAGCCAGGCGGGCATaGTCATATTTTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHLARRA*SYFQWK
Trigger: TTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAG...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACACCCGGGCTCCCTCGTaGTCCACCAGAACCACCGCC +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYTRAPS*STRTTA
Trigger: GGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGT...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGCAGGAGCTCGAAGCCTaGAAGGTTCTCAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVQELEA*KVLNGG
Trigger: GCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTG...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACCAGGAAATAGCTGGTaGCTTGCGGGTCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKPGNSW*LAGPAG
Trigger: TCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTGTCAGCTTTGGGGTTTaGGAACTGCACGCTGAAACT +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCVSFGV*ELHAET
Trigger: AGTTTCAGCGTGCAGTTCCCAAACCCCAAAGCTGAC...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCCTGGGAGTCTGCCACTaGCTGAAAGCATTCATCATT +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFLGVCH*LKAFII
Trigger: AATGATGAATGCTTTCAGCCAGTGGCAGACTCCCAG...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCACATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAAACTGCTGCCGCCGGTaGAATGGAAGGTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: DILERGPQRKTCRQGWEENCCRR*NGRSSG
Trigger: ACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTT...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTACTTGCCTGGCTAGTCTaGGGCCTCAGCTGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVLAWLV*GLSWRG
Trigger: CCCGCGCCAGCTGAGGCCTCAGACTAGCCAGGCAAG...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGCGTCCAGCAGCAGCTaGTCCTCGCGACTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYASSSS*SSRLVQ
Trigger: CTGGACCAGTCGCGAGGAGCAGCTGCTGCTGGACGC...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAACTCTTCTCCCGTTTATaGCGCGCTGCCTCGTACTCT +
Preference number: 4 (lower is better)
Translates to: DILERGPQRKTCRQGWEELFSRL*RAASYS
Trigger: AGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAG...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGCGAACTCGCTGTCTTTaGCGTCCTCCTTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVRTRCL*RPPFPV
Trigger: AACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCG...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCTGATTTTCCTCATCTaGTACACAGCGGAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCLIFLI*YTAEES
Trigger: AGACTCCTCCGCTGTGTAGCAGATGAGGAAAATCAG...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGTTCAAGACGCGTCCCTaGAGATCCAGCCGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVFKTRP*RSSRFL
Trigger: CAGAAAGCGGCTGGATCTCCAGGGACGCGTCTTGAA...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCATCCCCCAAGTCATTTTaGCTGGCACACTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPSPKSF*LAHCLS
Trigger: GCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGA...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAATCACCAGGAAATAGCTaGTGGCTTGCGGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DILERGPQRKTCRQGWEESPGNS*WLAGPA
Trigger: TGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTAAATGGAAGGTCATCTaGTCGCTGTGTTCAACAGAT +
Preference number: 4 (lower is better)
Translates to: TMGACPRGTALPKVNQQAKWKVI*SLCSTD
Trigger: ATCTGTTGAACACAGCGACCAGATGACCTTCCATTT...AGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGAACTGGCCGTATTCAAATaGGGCGCAGGGTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: WSLSTPKTLFKAGSWTRELAVFK*GAGSAL
Trigger: CAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAG...TTCTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAACTTGTAGGCAGGGCTaGGAAGAAGCCATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRTCRQG*EEAISE
Trigger: CTCAGAAATGGCTTCTTCCCAGCCCTGCCTACAAGT...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CTTGTGTCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCAGAACCCTGAGCAGCTaGAAGACAAAAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVSPGNSWWLAGPAGKHCRTLSS*KTKDFL
Trigger: GAGGAAGTCTTTTGTCTTCCAGCTGCTCAGGGTTCT...GCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGACACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCTCCAGCCGCTTTCTGTaGGGAAATTCAAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFSSRFL*GNSKSF
Trigger: AAAGGATTTTGAATTTCCTCACAGAAAGCGGCTGGA...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGATCCAGCCGCTTTCTGTaGGGAAATTCAAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGSSRFL*GNSKSF
Trigger: AAAGGATTTTGAATTTCCTCACAGAAAGCGGCTGGA...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGACACTCAAAAGGAAATaGTCCAATCTCACAATAAGC +
Preference number: 4 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSTLKRK*SNLTIS
Trigger: GCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGT...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCTGTTGTCCTCTGGCCTaGTTTTCCTCATCTGCTACA +
Preference number: 4 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGCCPLA*FSSSAT
Trigger: TGTAGCAGATGAGGAAAATCAGGCCAGAGGACAACA...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCCCCGGAAAATGGACTaGGAGGGCCTGGCGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKPRKMD*EGLAVH
Trigger: GTGGACCGCCAGGCCCTCTCAGTCCATTTTCCGGGG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGAGGCCAAGGAATGCCTaGACTCGCCTCATTCAGACT +
Preference number: 4 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVRPRNA*TRLIQT
Trigger: AGTCTGAATGAGGCGAGTTCAGGCATTCCTTGGCCT...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTCGTTTTTACAAAGGCTaGCCTAGAGTACTTCCTACA +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPRFYKG*PRVLPT
Trigger: TGTAGGAAGTACTCTAGGTCAGCCTTTGTAAAAACG...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTCAGAAAACGGGAGCCTaGAGGCAGCCCCGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAQKTGA*RQPRLR
Trigger: TCTCAGGCGGGGCTGCCTGCAGGCTCCCGTTTTCTG...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCCTAGCCAGGCGGGCATaGTCATATTTTCAGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGLARRA*SYFQWK
Trigger: TTTCCACTGAAAATATGAGCATGCCCGCCTGGCTAG...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCCGCTGGGACAGGTGTaGTCTGTCACGCGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKPLGQV*SVTRLG
Trigger: CCCCAACCGCGTGACAGACCACACCTGTCCCAGCGG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCAGAGGGGGCCTCCGCTaGGACAGGTGTGGTCTGTCA +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMIRGGLR*DRCGLS
Trigger: TGACAGACCACACCTGTCCCAGCGGAGGCCCCCTCT...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAGCTGTGGGCAGCGTaGGCTCAGAAAACGGGAGCC +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMIQLWAA*AQKTGA
Trigger: GGCTCCCGTTTTCTGAGCCCACGCTGCCCACAGCTG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGATCAAACTCCTTGCATaGCATGAACTGGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: RHSYRCLLARRACSYFQWIKLLA*HELVQR
Trigger: CCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGAT...CCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CACTTTAATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTCGGCTCTACCCAAAGTaGACCAGCAGGCTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: HFNVTSSPNILGGKQSLGRLYPK*TSRLWP
Trigger: CGGCCAGAGCCTGCTGGTTCACTTTGGGTAGAGCCG...ACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCAGAGTCTGCCACTGGCTaGAAGCATTCATCATTCCTA +
Preference number: 4 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPESATG*KHSSFL
Trigger: TAGGAATGATGAATGCTTTCAGCCAGTGGCAGACTC...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTTTCTTCCAAGTGAAATaGACTCACGTCTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPFFQVK*THVLTA
Trigger: TGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAA...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGGGTCTGTCACGCGGTTaGGGATGGTGTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKGLSRG*GWCRGC
Trigger: GCATCCCCGACACCATCCCCAACCGCGTGACAGACC...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAATTGCATGACATGAACTaGTACAGCGGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKLHDMN*YSGLSF
Trigger: GAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAA...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAACAGCCTGTTGTCCTCTaGCCTGATTTTCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKQPVVL*PDFPHL
Trigger: CAGATGAGGAAAATCAGGCCAGAGGACAACAGGCTG...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACCCATTCGTGGGGACGTaGTCACTATGGGAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYPFVGT*SLWEPA
Trigger: GGCAGGCTCCCATAGTGACCACGTCCCCACGAATGG...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACTGGACTGAGAGGGCCTaGCGGTCCACACGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYWTERA*RSTRVL
Trigger: TAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCA...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTGGACTGAGAGGGCCTaGCGGTCCACACGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAWTERA*RSTRVL
Trigger: TAGGACACGTGTGGACCGCCAGGCCCTCTCAGTCCA...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAACTTGTAGGCAGGGCTaGGAAGAAGCCATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKTCRQG*EEAISE
Trigger: CTCAGAAATGGCTTCTTCCCAGCCCTGCCTACAAGT...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTCACCCACACATTCTTGGGATGTTaGCCATTCAGACAGCATTAT +
Preference number: 4 (lower is better)
Translates to: EIAGGLRVQQENTAPVTHTFLGC*PFRQHY
Trigger: ATAATGCTGTCTGAATGGCCAACATCCCAAGAATGT...GTGGGTGACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR TCA 90 bp GGAGGTAAACAGTCTCTTGGTACCTACGGGGCCCGAGAGGCAAGTCAACCTCCTACACTCAAAAGGAAATaGTCCAATCTCACAATAAGC +
Preference number: 4 (lower is better)
Translates to: GGKQSLGTYGAREASQPPTLKRK*SNLTIS
Trigger: GCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGT...AGGAGGTTGACTTGCCTCTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp CGCTGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGACATATCTTCCTACGATaGCAAAGGGCAGAAGTTAGT +
Preference number: 4 (lower is better)
Translates to: RWSLSTPKTLFKAGSWTRHIFLR*QRAEVS
Trigger: ACTAACTTCTGCCCTTTGTCATCGTAGGAAGATATG...TCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR GCA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAATCCCGTGGATGTACATaGTCACGTAATGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKSRGCT*SRNAPS
Trigger: TGATGGAGCATTACGTGAGCATGTACATCCACGGGA...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTTTCGCCGGTACCGCTaGAGTTCTCGGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAFRRYR*SSRILA
Trigger: GGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAA...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGAGTCTGGGCCCAAGCTaGCCCCATGTAAAGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKSLGPS*PHVKCR
Trigger: GCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACT...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTTTCTTCCAAGTGAAATaGACTCACGTCTTAACAGCA +
Preference number: 4 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCFFQVK*THVLTA
Trigger: TGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAA...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACCGGGAAGCACCAACGTaGGCAGCCATATCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYREAPT*AAISSQ
Trigger: CTGGGAAGATATGGCTGCCCACGTTGGTGCTTCCCG...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAGGAGCTCGAAGCCTaGAAGGTTCTCAATGGCGGC +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMIQELEA*KVLNGG
Trigger: GCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTAGCGCAGGGTCAGCTTTaGGGTTTGGGAACTGCACGC +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVAQGQL*GLGTAR
Trigger: GCGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGC...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCGGGAAGCACCAACGTaGGCAGCCATATCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASREAPT*AAISSS
Trigger: CGAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCG...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512388.1
3UTR CAA 72 bp CAGGCGGGCATGCTCATATTTTCAGTGGAAAGGTACTaGCAACTGAAGAAAATCCTGAGGAAGCTGACGCCA +
Preference number: 4 (lower is better)
Translates to: QAGMLIFSVERY*QLKKILRKLTP
Trigger: TGGCGTCAGCTTCCTCAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGAAAATATGAGCATGCCCGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTACTCTTCCATCTTGGTaGTCCCGTTTCGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFATLPSW*SRFAGT
Trigger: GGTACCGGCGAAACGGGATCACCAAGATGGAAGAGT...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCACTCTTCCATCTTGGTaGTCCCGTTTCGCCGGTACC +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASTLPSW*SRFAGT
Trigger: GGTACCGGCGAAACGGGATCACCAAGATGGAAGAGT...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp CACTTTAATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTTGCCGCACACCATTTTaGTTCAGGAGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: HFNVTSSPNILGGKQSLGCRTPF*FRRPGG
Trigger: CCCACCTGGCCTCCTGAATCAAAATGGTGTGCGGCA...ACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTCGAACTCGCTGTCTTTaGCGTCCTCCTTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFARTRCL*RPPFPV
Trigger: AACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCG...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTTGGAGGGGATTCCTTaGCGCTTCTGGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFALEGIP*RFWRWS
Trigger: AGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAA...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGGTCACTATGGGAGCCTaGCCAAGAGGCACGGCTCTA +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKVTMGA*PRGTAL
Trigger: TAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGAC...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTCCAGCACTGCAGCGCTaGCTGCAGCACTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASPALQR*LQHCQR
Trigger: CCTCTGGCAGTGCTGCAGGCAGCGCTGCAGTGCTGG...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCTTCCCCAGGAAGGCTaGCACCAGATTGTAGTCACG +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASLPQEG*HQIVVT
Trigger: CGTGACTACAATCTGGTGCCAGCCTTCCTGGGGAAG...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCTTCCCCAGGAAGGCTaGCACCAGATTGTAGTCACG +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMILPQEG*HQIVVT
Trigger: CGTGACTACAATCTGGTGCCAGCCTTCCTGGGGAAG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCTTCAAGACGCGTCCCTaGAGATCCAGCCGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMIFKTRP*RSSRFL
Trigger: CAGAAAGCGGCTGGATCTCCAGGGACGCGTCTTGAA...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCTGGCCGTATTCAAATaGGGCGCAGGGTCAGCTTTG +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMILAVFK*GAGSAL
Trigger: CAAAGCTGACCCTGCGCCCCATTTGAATACGGCCAG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTAAACTGCTGCCGCCGGTaGAATGGAAGGTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVNCCRR*NGRSSG
Trigger: ACCAGATGACCTTCCATTTCACCGGCGGCAGCAGTT...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTGGATGGTGTCGGGGATaGAGGCCTTCCCCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASGWCRG*RPSPGS
Trigger: GGAACCTGGGGAAGGCCTGCATCCCCGACACCATCC...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp CACTTTAATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTTTGGAGGGGATTCCTTaGCGCTTCTGGAGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HFNVTSSPNILGGKQSLGLEGIP*RFWRWS
Trigger: AGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAA...ACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTTGGGGTTTGGGAACTaGACGCTGAAACTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLGFGN*TLKLLP
Trigger: CGGCAGCAGTTTCAGCGTGCAGTTCCCAAACCCCAA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR GCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTAGGGCAGGCCAAGGAATaGCTGAACTCGCCTCATTCA +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVGQAKE*LNSPHS
Trigger: TGAATGAGGCGAGTTCAGGCATTCCTTGGCCTGCCC...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTGGTCTGTCACGCGGTTaGGGATGGTGTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASGLSRG*GWCRGC
Trigger: GCATCCCCGACACCATCCCCAACCGCGTGACAGACC...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCTTCCCCAGGAAGGCTaGCACCAGATTGTAGTCACG +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLPQEG*HQIVVT
Trigger: CGTGACTACAATCTGGTGCCAGCCTTCCTGGGGAAG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTCCTCCTTTCCCCGTTTaGAGCCGGCTAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAPPFPV*SRLGFC
Trigger: ACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGG...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CGACACTCTTACAGATGCCTACTAGCCAGGCGGGCATGCTCATATTTTCAGTGGATTCCTTGCCGCTTCTaGAGGTGGTCTTTAATTATA +
Preference number: 4 (lower is better)
Translates to: RHSYRCLLARRACSYFQWIPCRF*RWSLII
Trigger: TATAATTAAAGACCACCTCCAGAAGCGGCAAGGAAT...CCACTGAAAATATGAGCATGCCCGCCTGGCTAGTAGGCATCTGTAAGAGTGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCTCCCCCAAGTCATTTTaGCTGGCACACTGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASSPKSF*LAHCLS
Trigger: GCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGA...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACCACTGTCTTATGAGCTaGGCTCAGGGGAGAGATGAC +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYHCLMS*AQGRDD
Trigger: GTCATCTCTCCCCTGAGCCCAGCTCATAAGACAGTG...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTACCGTGGACATCCTTaGAAGAGGACCCCAGAGAAA +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAYRGHP*KRTPEK
Trigger: TTTCTCTGGGGTCCTCTTTCAAGGATGTCCACGGTA...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTATGGAGGTGGCCCTCATaGTACCACTGCTCAGTACTT +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVWRWPS*YHCSVL
Trigger: AAGTACTGAGCAGTGGTATCATGAGGGCCACCTCCA...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTCCGTTTATGCCGCGCTaGCTCGTACTCTGCCGACTC +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIPFMPR*LVLCRL
Trigger: GAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGG...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCTGGAAGGTTCTCAATaGCGGCGAACTCGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLEGSQ*RRTRCL
Trigger: AAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCAGGAGGAAGGTACCGTaGACATCCTTGAAAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASRRKVP*TSLKED
Trigger: GTCCTCTTTCAAGGATGTCCACGGTACCTTCCTCCT...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTATTCAGGAGGCCAGGTaGGGCCTGCGCGTCTGCATT +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIIQEAR*GLRVCI
Trigger: AATGCAGACGCGCAGGCCCCACCTGGCCTCCTGAAT...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTGCTGGCACAAGGTCTTaGGGTGAGCTGGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASAGTRS*GELVAE
Trigger: CTCTGCCACCAGCTCACCCCAAGACCTTGTGCCAGC...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCTCAGGGTGCCAGATTTaGGTTCCGCACAGATTCTCT +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASSGCQI*VPHRFS
Trigger: AGAGAATCTGTGCGGAACCCAAATCTGGCACCCTGA...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTATCAAACTCCTTGCATaGCATGAACTGGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAIKLLA*HELVQR
Trigger: CCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGAT...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACATCAAACTCCTTGCATaGCATGAACTGGTACAGCGG +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYIKLLA*HELVQR
Trigger: CCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGAT...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR TCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTA +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMIHHRSV*LAGTHL
Trigger: TAAGTGAGTTCCTGCGAGTCATACACTGCGATGATG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCTCCCGTGGATGTACATaGTCACGTAATGCTCCATCA +
Preference number: 4 (lower is better)
Translates to: CMTRRNSLKIHTFASPMISRGCT*SRNAPS
Trigger: TGATGGAGCATTACGTGAGCATGTACATCCACGGGA...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTTTTCGCCGGTACCGCTaGAGTTCTCGGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIFRRYR*SSRILA
Trigger: GGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAA...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTACCAGTTCTACCATGTTaGCACCCGCTGGAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVPVLPC*HPLEKQ
Trigger: TTGCTTTTCCAGCGGGTGGCAACATGGTAGAACTGG...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTACGTACATGTCCACGTaGGCGCGCTTCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKITYMST*ARFSSI
Trigger: GATCGAGCTGAAGCGCGCCCACGTGGACATGTACGT...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTTGCATGACATGAACTaGTACAGCGGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLHDMN*YSGLSF
Trigger: GAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCATTGAACTTTGTACAATaGGTTCTTCCAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPLNFVQ*VLPSEM
Trigger: CATTTCACTTGGAAGAACCCATTGTACAAAGTTCAA...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp TCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCAGAACCCTGAGCAGCTaGAAGACAAAAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: SSQCMTRRNSLKIHTFASRTLSS*KTKDFL
Trigger: GAGGAAGTCTTTTGTCTTCCAGCTGCTCAGGGTTCT...GGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTACCAAACTAGGATCCTaGCGCTGTAGAAAATCAGGG +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFATKLGS*RCRKSG
Trigger: CCCTGATTTTCTACAGCGCCAGGATCCTAGTTTGGT...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR TCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGACAAAGTTTTTCATTTaGCAGCTCTTGGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKTKFFI*QLLAWA
Trigger: GGCCCAGGCCAAGAGCTGTCAAATGAAAAACTTTGT...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR GCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTCTCTTCTCCCGTTTATaGCGCGCTGCCTCGTACTCT +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASLFSRL*RAASYS
Trigger: AGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAG...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACTCAAGTTTAAAGAGCTaGAGAGCACCTTCTCGCGAT +
Preference number: 4 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYSSLKS*RAPSRD
Trigger: ATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGA...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTCGGGAAGCACCAACGTaGGCAGCCATATCTTCCTAC +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASREAPT*AAISSY
Trigger: GTAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCG...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR TCA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCAGCCGCTTTCTGTaGGGAAATTCAAAATCCTTT +
Preference number: 4 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFASSRFL*GNSKSF
Trigger: AAAGGATTTTGAATTTCCTCACAGAAAGCGGCTGGA...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTCCTCCTTTCCCCGTTTaGAGCCGGCTAGGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIPPFPV*SRLGFC
Trigger: ACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGG...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGACTTCAGAAAGTAACTaGCCAAAGTGCGCACTCATT +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKTSESN*PKCALI
Trigger: AATGAGTGCGCACTTTGGGCAGTTACTTTCTGAAGT...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTTTGCATGACATGAACTaGTACAGCGGCCTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKILHDMN*YSGLSF
Trigger: GAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAA...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTCATCATCGCAGTGTATaGCTCGCAGGAACTCACTTA +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIHHRSV*LAGTHL
Trigger: TAAGTGAGTTCCTGCGAGTCATACACTGCGATGATG...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR TCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCATTTGCTTCCCCCATaGTCCAATATAAGATTGTTA +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKHLLPP*SNIRLL
Trigger: TAACAATCTTATATTGGATCATGGGGGAAGCAAATG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR GCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTTCAAGTTTAAAGAGCTaGAGAGCACCTTCTCGCGAT +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASSSLKS*RAPSRD
Trigger: ATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGA...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTTGAACTTTGTACAATaGGTTCTTCCAAGTGAAATG +
Preference number: 4 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLNFVQ*VLPSEM
Trigger: CATTTCACTTGGAAGAACCCATTGTACAAAGTTCAA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CCA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTATTCCTTGCCGCTTCTaGAGGTGGTCTTTAATTATA +
Preference number: 4 (lower is better)
Translates to: IHTFASPMIQYKIVTIASIPCRF*RWSLII
Trigger: TATAATTAAAGACCACCTCCAGAAGCGGCAAGGAAT...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CCA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTATTCCTTGCCGCTTCTaGAGGTGGTCTTTAATTATA +
Preference number: 4 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIIPCRF*RWSLII
Trigger: TATAATTAAAGACCACCTCCAGAAGCGGCAAGGAAT...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 90 bp CCTCGCGACTGGTCCAGCCGCCCTCGGCCTCGGGCCCCCAGAGCGTaGAGCGCCCGCCGTCCACCAGCTGGTAGCCGTGGTAGCGGCGGT +
Preference number: 5 (lower is better)
Translates to: PRDWSSRPRPRAPRA*SARRPPAGSRGSGG
Trigger: ACCGCCGCTACCACGGCTACCAGCTGGTGGACGGCGGGCGCTTCACGCTCTGGGGGCCCGAGGCCGAGGGCGGCTGGACCAGTCGCGAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS CCA 90 bp ATCTCGGCGCCGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTaGCACTCGGTGCAGCGGAAGCGCAGCGGGCTCACCTCGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ISAPAEKHSGHSSMS*HSVQRKRSGLTSAR
Trigger: CCTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCGGCGCCGAGAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS GCA 90 bp CGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTGGCACTCGGTaGAGCGGAAGCGCAGCGGGCTCACCTCGGCCAGGCAGTACACGC +
Preference number: 5 (lower is better)
Translates to: RPRSTRGTARCPGTR*SGSAAGSPRPGSTR
Trigger: GCGTGTACTGCCTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS GCA 90 bp TCCCAGTTTCCGAAGCCGAACTGCTCGATGGCGTCCAGCAGCAGCTaGTCCTCGCGACTGGTCCAGCCGCCCTCGGCCTCGGGCCCCCAG +
Preference number: 5 (lower is better)
Translates to: SQFPKPNCSMASSSS*SSRLVQPPSASGPQ
Trigger: CTGGGGGCCCGAGGCCGAGGGCGGCTGGACCAGTCGCGAGGAGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGAAACTGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CAA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGGCGAACTCGCTGTCTTaGCCGTCCTCCTTTCCCCGT +
Preference number: 5 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGANSLS*PSSFPR
Trigger: ACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGC...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGCTAGGAAGGCGGCTTTaGGAGGGGATTCCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGLGRRL*EGIPCR
Trigger: GCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAG...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: EESGPKLPPCKVPRARGCMLHHL*GSPGST
Trigger: GGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCAT...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGAGGTAAACAGTCTCTaGGTACCTACGGGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: EESGPKLPPCKVPRARGCEVNSL*VPTGPE
Trigger: CTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTC...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS CCA 90 bp CGTGGGCAGCCATATCTTCCCAGTTTCCGAAGCCGAACTGCTCGATaGCGTCCAGCAGCAGCTGCTCCTCGCGACTGGTCCAGCCGCCCT +
Preference number: 5 (lower is better)
Translates to: RGQPYLPSFRSRTAR*RPAAAAPRDWSSRP
Trigger: AGGGCGGCTGGACCAGTCGCGAGGAGCAGCTGCTGCTGGACGCCATCGAGCAGTTCGGCTTCGGAAACTGGGAAGATATGGCTGCCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS-3UTR CAA 90 bp GAGGAGTCTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCCCCAGTTCTACCATGTaGCCACCCGCTGGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: EESGPKLPPCKVPRARGCPSSTM*PPAGKA
Trigger: TGCTTTTCCAGCGGGTGGCAACATGGTAGAACTGGG...GCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAGACTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS TCA 90 bp ACCATGTTGCCACCCGCTGGAAAAGCAAGGGCCAGGACACCTCTGTaGCGCTTGTCCTGGCCGCACACCCATCCTGGCCTTCATGCGCCG +
Preference number: 5 (lower is better)
Translates to: TMLPPAGKARARTPL*RLSWPHTHPGLHAP
Trigger: CGGCGCATGAAGGCCAGGATGGGTGTGCGGCCAGGACAAGCGTCACAGAGGTGTCCTGGCCCTTGCTTTTCCAGCGGGTGGCAACATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 90 bp GACCTGCAGTGGTACCACCAGGAGCTGGGCCAGTTGAAGCGGCAGTaGCAGGAGAAGCTCACCAGGGTGGAGAAGGAGTGGCGACGCTTC +
Preference number: 5 (lower is better)
Translates to: DLQWYHQELGQLKRQ*QEKLTRVEKEWRRF
Trigger: GAAGCGTCGCCACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCGCTTCAACTGGCCCAGCTCCTGGTGGTACCACTGCAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS GCA 90 bp CCCCACCTGCGACCAGAGGAGCCCACCTGGTACTGCCATAAACCCTaGACTCAGGGGCTGTCTGAATGTCCCAGGAGACAGCAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PHLRPEEPTWYCHKP*TQGLSECPRRQQGR
Trigger: CCTGCCCTGCTGTCTCCTGGGACATTCAGACAGCCCCTGAGTGCAGGGTTTATGGCAGTACCAGGTGGGCTCCTCTGGTCGCAGGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 90 bp GGAGAGAAGTGTTCTGGGCTCCAGGAACGGATGGGATCCCACAGCTaGGGCTTCCTCTGGCACACATGCCTGGAGCCGAGGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GEKCSGLQERMGSHS*GFLWHTCLEPRCWT
Trigger: GGTCCAGCACCTCGGCTCCAGGCATGTGTGCCAGAGGAAGCCCCAGCTGTGGGATCCCATCCGTTCCTGGAGCCCAGAACACTTCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGCTAGGAAGGCGGCTTTaGGAGGGGATTCCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: PPPANWSDGSCLASLRPQLGRRL*EGIPCR
Trigger: GCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAG...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS TCA 90 bp AGCAGGCAGACGACCTGCAGTGGTACCACCAGGAGCTGGGCCAGTTaGAGCGGCAGTGCCAGGAGAAGCTCACCAGGGTGGAGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SRQTTCSGTTRSWAS*SGSARRSSPGWRRS
Trigger: ACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCGCTTCAACTGGCCCAGCTCCTGGTGGTACCACTGCAGGTCGTCTGCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS GCA 90 bp GGCCAAGTCCACGGCACTGCAGGAGGGGACCCAGTTCTACCATGTTaGCACCCGCTGGAAAAGCAAGGGCCAGGACACCTCTGTGACGCT +
Preference number: 5 (lower is better)
Translates to: GQVHGTAGGDPVLPC*HPLEKQGPGHLCDA
Trigger: AGCGTCACAGAGGTGTCCTGGCCCTTGCTTTTCCAGCGGGTGGCAACATGGTAGAACTGGGTCCCCTCCTGCAGTGCCGTGGACTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 90 bp ACGGCACTGCAGGAGGGGACCCAGTTCTACCATGTTGCCACCCGCTaGAAAAGCAAGGGCCAGGACACCTCTGTGACGCTTGTCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TALQEGTQFYHVATR*KSKGQDTSVTLVLA
Trigger: GGCCAGGACAAGCGTCACAGAGGTGTCCTGGCCCTTGCTTTTCCAGCGGGTGGCAACATGGTAGAACTGGGTCCCCTCCTGCAGTGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp CTGGGCCCAAGCTGCCCCCATGTAAAGTGCCGCGTGCCCGGGGCTGCGCTGGGGAGGTCATCAAACTCCTaGCATGACATGAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LGPSCPHVKCRVPGAALGRSSNS*HDMNWY
Trigger: GTACCAGTTCATGTCATGCAAGGAGTTTGATGACCT...CCCCAGCGCAGCCCCGGGCACGCGGCACTTTACATGGGGGCAGCTTGGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS GCA 90 bp AACGGGCTTGTGCCAGGGTGTGAGACCAGGCCAAGTCCACGGCACTaGAGGAGGGGACCCAGTTCTACCATGTTGCCACCCGCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: NGLVPGCETRPSPRH*RRGPSSTMLPPAGK
Trigger: TTTTCCAGCGGGTGGCAACATGGTAGAACTGGGTCCCCTCCTGCAGTGCCGTGGACTTGGCCTGGTCTCACACCCTGGCACAAGCCCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 90 bp TTGAAGCGGCAGTGCCAGGAGAAGCTCACCAGGGTGGAGAAGGAGTaGCGACGCTTCCAGGCACTCAAGAAGCAGGTGGTGATGCAGGCC +
Preference number: 5 (lower is better)
Translates to: LKRQCQEKLTRVEKE*RRFQALKKQVVMQA
Trigger: GGCCTGCATCACCACCTGCTTCTTGAGTGCCTGGAAGCGTCGCCACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCGCTTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS-3UTR CAA 90 bp CGGGGCCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTGAGTTTGGAGGGGATTCCTaGCCGCTTCTGGAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RGPRGKSTSLKNGALESEFGGDS*PLLEVV
Trigger: GACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAA...CTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS TCA 90 bp GTTTATGCCGCGCTGCCTCGTACTCTGCCGACTCTTCCATCTTGGTaGTCCCGTTTCGCCGGTACCGCTGCAGTTCTCGGATCTTGGCCC +
Preference number: 5 (lower is better)
Translates to: VYAALPRTLPTLPSW*SRFAGTAAVLGSWP
Trigger: GGGCCAAGATCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 90 bp GAAACCAGAGGGACCGCCACCCCATCCAGGCTGATGACTATGAGCTaGCGTCTGGGAGAGAAGTGTTCTGGGCTCCAGGAACGGATGGGA +
Preference number: 5 (lower is better)
Translates to: ETRGTATPSRLMTMS*RLGEKCSGLQERMG
Trigger: TCCCATCCGTTCCTGGAGCCCAGAACACTTCTCTCCCAGACGCCAGCTCATAGTCATCAGCCTGGATGGGGTGGCGGTCCCTCTGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCATCCTCCTTTCCCCGTTaGGAGCCGGCTAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPSSFPR*EPARFL
Trigger: CAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGA...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp ATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCAAAGTGAACCAGCAGGCTCTGTTTGGAGGGGATTCCTaGCCGCTTCTGGAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: MGACPRGTALPKVNQQALFGGDS*PLLEVV
Trigger: GACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAA...CAGAGCCTGCTGGTTCACTTTGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CGGGGCCCGAGAGGCAAGTCAACCTCCTTGAAGAACGGAGCGCTGGAGTCTGAGCTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RGPRGKSTSLKNGALESELPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...CTCAGACTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCCTCTCGGGCCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS GCA 90 bp GTTCTCCTTCCTCTTCTCCCGTTTATGCCGCGCTGCCTCGTACTCTaGCGACTCTTCCATCTTGGTGATCCCGTTTCGCCGGTACCGCTG +
Preference number: 5 (lower is better)
Translates to: VLLPLLPFMPRCLVL*RLFHLGDPVSPVPL
Trigger: CAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 90 bp CCTTCTCGCGATCTGACAGGAGCTCGAAGCCTGGAAGGTTCTCAATaGCGGCGAACTCGCTGTCTTTGCCGTCCTCCTTTCCCCGTTTGG +
Preference number: 5 (lower is better)
Translates to: PSRDLTGARSLEGSQ*RRTRCLCRPPFPVW
Trigger: CCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGCTTCGAGCTCCTGTCAGATCGCGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CCCTCCCCCAAGTCATTTTGGCTGGCACACTGTCTGAGCATCACCCTGGCTTTCGCCGACTCTTCCATCTaGGTGATCCCGTTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: PSPKSFWLAHCLSITLAFADSSI*VIPFRR
Trigger: CCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGC...GAAAGCCAGGGTGATGCTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGCTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: PGGPHVSYVPPTNVLSHSLPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...CGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGGCTCTACCCACCGCCTGAGAAGAGCTaGTGTCACCAGGAAATAGCT +
Preference number: 5 (lower is better)
Translates to: FVGTWSLWEPAQEARLYPPPEKS*CHQEIA
Trigger: AGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGG...TGGGTAGAGCCGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp AGAGGGCCTGGCGGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCAAAACGCCAGCCTGTaGTCCTCTGGCCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: RGPGGPHVSYVPPTNVLSQNASL*SSGLIF
Trigger: GAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTG...GGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACCGCCAGGCCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS TCA 90 bp AGGCACAAGCTGGCACAAGGTCTTGGGGTGAGCTGGTGGCAGAGCTaGGGCCAGAACCCCTGGCTGAGGTTTGGACTTTGTTCTCATTCC +
Preference number: 5 (lower is better)
Translates to: RHKLAQGLGVSWWQS*GQNPWLRFGLCSHS
Trigger: GGAATGAGAACAAAGTCCAAACCTCAGCCAGGGGTTCTGGCCTCAGCTCTGCCACCAGCTCACCCCAAGACCTTGTGCCAGCTTGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 90 bp CCAGAACCCCTGGCTGAGGTTTGGACTTTGTTCTCATTCCCCACCTaGGACCAGAGGAGCCCACCTGGTACTGCCATAAACCCTGCACTC +
Preference number: 5 (lower is better)
Translates to: PEPLAEVWTLFSFPT*DQRSPPGTAINPAL
Trigger: GAGTGCAGGGTTTATGGCAGTACCAGGTGGGCTCCTCTGGTCGCAGGTGGGGAATGAGAACAAAGTCCAAACCTCAGCCAGGGGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp GTTCTTCCAAGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: VLPSEMHSRLNSSTEQPRMLHHL*GSPGST
Trigger: GGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCAT...CCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACTTGGAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TCACCAGGAAATAGCTGGTGGCTTGCGGGTCCAGCAGGAAAACACTGCTCCTGTGCGAACTCGCTGTCTTaGCCGTCCTCCTTTCCCCGT +
Preference number: 5 (lower is better)
Translates to: SPGNSWWLAGPAGKHCSCANSLS*PSSFPR
Trigger: ACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGC...ACAGGAGCAGTGTTTTCCTGCTGGACCCGCAAGCCACCAGCTATTTCCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CACCACCCGGGCTCCCTCGTGCTCCACCAGAACCACCGCCAGCCAACTGGTCAGTCAGTGGAAAGGTACTaGCAACTGAAGAAAATCCTG +
Preference number: 5 (lower is better)
Translates to: HHPGSLVLHQNHRQPTGQSVERY*QLKKIL
Trigger: CAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGA...CTGACCAGTTGGCTGGCGGTGGTTCTGGTGGAGCACGAGGGAGCCCGGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS GCA 90 bp GCTCGAAGCCTGGAAGGTTCTCAATGGCGGCGAACTCGCTGTCTTTaGCGTCCTCCTTTCCCCGTTTGGAGCCGGCTAGGTTTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: ARSLEGSQWRRTRCL*RPPFPVWSRLGFCS
Trigger: AGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGCTTCGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CCACCGCCAGCCAACTGGTCAGACGGCTCTTGCCTGGCTAGTCTGAGGCCTCAGAGGTCATCAAACTCCTaGCATGACATGAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: PPPANWSDGSCLASLRPQRSSNS*HDMNWY
Trigger: GTACCAGTTCATGTCATGCAAGGAGTTTGATGACCT...CTGAGGCCTCAGACTAGCCAGGCAAGAGCCGTCTGACCAGTTGGCTGGCGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp AGTGAAATGCACTCACGTCTTAACAGCAGCACCGAGCAGCCCCGGAAAATGGACGCCGACTCTTCCATCTaGGTGATCCCGTTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: SEMHSRLNSSTEQPRKMDADSSI*VIPFRR
Trigger: CCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGC...GTCCATTTTCCGGGGCTGCTCGGTGCTGCTGTTAAGACGTGAGTGCATTTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGAGCCTGCCCAAGAGGCACGATTCTAACAAACAAGTaGCTGCTGCTGGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: CFPIRGDVVTMGACPRGTILTNK*LLLGQE
Trigger: CTCCTGGCCCAGCAGCAGCAACTTGTTTGTTAGAAT...CGTGCCTCTTGGGCAGGCTCCCATAGTGACCACGTCCCCACGAATGGGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS GCA 90 bp GCCTCTTCCTCAAAGTCAACCGCTAAAGCCACTTCAGAAAGTAACTaGCCAAAGTGCGCACTCATTCCCTGGCCACCGCCTCTCAGCCAC +
Preference number: 5 (lower is better)
Translates to: ASSSKSTAKATSESN*PKCALIPWPPPLSH
Trigger: GTGGCTGAGAGGCGGTGGCCAGGGAATGAGTGCGCACTTTGGGCAGTTACTTTCTGAAGTGGCTTTAGCGGTTGACTTTGAGGAAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp ACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGACGTGGTCACTATGGGACAAAACGCCAGCCTGTaGTCCTCTGGCCTGATTTTC +
Preference number: 5 (lower is better)
Translates to: TSLPLTCFPIRGDVVTMGQNASL*SSGLIF
Trigger: GAAAATCAGGCCAGAGGACAACAGGCTGGCGTTTTG...TCCCATAGTGACCACGTCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CTGAGCAGCTGGAAGACAAAAGACTTCCTCAAGTTTCAGGAGGAAGGTACCGTGGGCGCAGGGTCAGCTTaGGGGTTTGGGAACTGCACG +
Preference number: 5 (lower is better)
Translates to: LSSWKTKDFLKFQEEGTVGAGSA*GFGNCT
Trigger: CGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCC...CACGGTACCTTCCTCCTGAAACTTGAGGAAGTCTTTTGTCTTCCAGCTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TGGAGTCTGAGCACGCCAAAGACTCTCTTTAAAGCAGGGTCTTGGACCAGAGAAGGCGCAGGGTCAGCTTaGGGGTTTGGGAACTGCACG +
Preference number: 5 (lower is better)
Translates to: WSLSTPKTLFKAGSWTREGAGSA*GFGNCT
Trigger: CGTGCAGTTCCCAAACCCCAAAGCTGACCCTGCGCC...TTCTCTGGTCCAAGACCCTGCTTTAAAGAGAGTCTTTGGCGTGCTCAGACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS TCA 90 bp GGGAGTCCGGGAAGCACCAACGTGGGCAGCCATATCTTCCTACGATaGCAAAGGGCAGAAGTTAGTTCCACCATCAGGGTGCCAGATTTG +
Preference number: 5 (lower is better)
Translates to: GSPGSTNVGSHIFLR*QRAEVSSTIRVPDL
Trigger: CAAATCTGGCACCCTGATGGTGGAACTAACTTCTGCCCTTTGTCATCGTAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 90 bp TTGGAGCCGGCTAGGTTTTTGTTCTCCTTCCTCTTCTCCCGTTTATaGCGCGCTGCCTCGTACTCTGCCGACTCTTCCATCTTGGTGATC +
Preference number: 5 (lower is better)
Translates to: LEPARFLFSFLFSRL*RAASYSADSSILVI
Trigger: GATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 90 bp CAATGGCGGCGAACTCGCTGTCTTTGCCGTCCTCCTTTCCCCGTTTaGAGCCGGCTAGGTTTTTGTTCTCCTTCCTCTTCTCCCGTTTAT +
Preference number: 5 (lower is better)
Translates to: QWRRTRCLCRPPFPV*SRLGFCSPSSSPVY
Trigger: ATAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 90 bp CCGTTACCCACCCTCCCCAAAGGCATTCAGTCACACACTGTCTTATaGGCTGGGCTCAGGGGAGAGATGACAATGTTGAAGCAACAACAC +
Preference number: 5 (lower is better)
Translates to: PLPTLPKGIQSHTVL*AGLRGEMTMLKQQH
Trigger: GTGTTGTTGCTTCAACATTGTCATCTCTCCCCTGAGCCCAGCTCATAAGACAGTGTGTGACTGAATGCCTTTGGGGAGGGTGGGTAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 90 bp ACCCACCCTCCCCAAAGGCATTCAGTCACACACTGTCTTATGAGCTaGGCTCAGGGGAGAGATGACAATGTTGAAGCAACAACACATGCT +
Preference number: 5 (lower is better)
Translates to: THPPQRHSVTHCLMS*AQGRDDNVEATTHA
Trigger: AGCATGTGTTGTTGCTTCAACATTGTCATCTCTCCCCTGAGCCCAGCTCATAAGACAGTGTGTGACTGAATGCCTTTGGGGAGGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp GACATCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAACCGCCTGAGAAGAGCTaGTGTCACCAGGAAATAGCT +
Preference number: 5 (lower is better)
Translates to: DILERGPQRKTCRQGWEEPPEKS*CHQEIA
Trigger: AGCTATTTCCTGGTGACACAAGCTCTTCTCAGGCGG...TTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp GGTCCACACGTGTCCTACGTCCCTCCCACTAACGTGCTTTCCCATTCGTGGGGATCAGAACTCTTAGCCTaGAACTTTGTACAATGGGTT +
Preference number: 5 (lower is better)
Translates to: GPHVSYVPPTNVLSHSWGSELLA*NFVQWV
Trigger: AACCCATTGTACAAAGTTCAAGGCTAAGAGTTCTGA...TCCCCACGAATGGGAAAGCACGTTAGTGGGAGGGACGTAGGACACGTGTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS CCA 90 bp TGCATGTTTTCAAAAAGGTCATCAAACTCCTTGCATGACATGAACTaGTACAGCGGCCTCAGCTTCAGGCGCAGCTCCTTCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: CMFSKRSSNSLHDMN*YSGLSFRRSSFSSL
Trigger: CAAGGAGGAGAAGGAGCTGCGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTGGTCTGTCACGCGGTaGGGGATGGTGTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKWSVTR*GMVSGM
Trigger: CATCCCCGACACCATCCCCAACCGCGTGACAGACCA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGCCGACTCTTCCATCTaGGTGATCCCGTTTCGCCGG +
Preference number: 5 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYADSSI*VIPFRR
Trigger: CCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGC...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCTAGGAAGGCGGCTTTaGGAGGGGATTCCTTGCCGC +
Preference number: 5 (lower is better)
Translates to: CMTRRNSLKIHTFASPMILGRRL*EGIPCR
Trigger: GCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAG...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 90 bp CTTTGTGCATGTTTTCAAAAAGGTCATCAAACTCCTTGCATGACATaGACTGGTACAGCGGCCTCAGCTTCAGGCGCAGCTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LCACFQKGHQTPCMT*TGTAASASGAAPSP
Trigger: AGGAGAAGGAGCTGCGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACATGCACAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CCATTTCTGAGTCTGATTCAAGACAGTGACAGAGAGCAGCTCGAGGCTCAGGGCTCAGTGGAAAGGTACTaGCAACTGAAGAAAATCCTG +
Preference number: 5 (lower is better)
Translates to: PFLSLIQDSDREQLEAQGSVERY*QLKKIL
Trigger: CAGGATTTTCTTCAGTTGCAAGTACCTTTCCACTGA...GCCCTGAGCCTCGAGCTGCTCTCTGTCACTGTCTTGAATCAGACTCAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGGCAAGTCAACCTCCTaGAAGAACGGAGCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYGKSTS*KNGALE
Trigger: CTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCC...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp GCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTGGCAAGTCAACCTCCTaGAAGAACGGAGCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ASSQCMTRRNSLKIHTFAGKSTS*KNGALE
Trigger: CTCCAGCGCTCCGTTCTTCAAGGAGGTTGACTTGCC...AGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACGAGGTAAACAGTCTCTaGGTACCTACGGGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYEVNSL*VPTGPE
Trigger: CTCGGGCCCCGTAGGTACCAAGAGACTGTTTACCTC...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp TCCTTGAAAGAGGACCCCAGAGAAAAACTTGTAGGCAGGGCTGGGAAGAAGCCAGGAGAGATGACAATGTaGAAGCAACAACACATGCTG +
Preference number: 5 (lower is better)
Translates to: SLKEDPREKLVGRAGKKPGEMTM*KQQHML
Trigger: CAGCATGTGTTGTTGCTTCAACATTGTCATCTCTCC...TGGCTTCTTCCCAGCCCTGCCTACAAGTTTTTCTCTGGGGTCCTCTTTCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp TGTATGACTCGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCTCCTCCTTGGTGATCTaGCGCTTCAGCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CMTRRNSLKIHTFASPMISSLVI*RFSAFS
Trigger: GGAAAAGGCGCTGAAGCGCAAGATCACCAAGGAGGA...GATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCGAGTCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp ACGGGTAAAGGCGGAGCATCATCGCAGTGTATGACTCGCAGGAACTCACTTAAAAGGTCATCAAACTCCTaGCATGACATGAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: TGKGGASSQCMTRRNSLKRSSNS*HDMNWY
Trigger: GTACCAGTTCATGTCATGCAAGGAGTTTGATGACCT...TTTAAGTGAGTTCCTGCGAGTCATACACTGCGATGATGCTCCGCCTTTACCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp AATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTACCTACTCCTCCTTTCCCCGTTaGGAGCCGGCTAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: NVTSSPNILGGKQSLGTYSSFPR*EPARFL
Trigger: CAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGA...GTAGGTACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTTTGGAGGGGATTCCTaGCCGCTTCTGGAGGTGGTC +
Preference number: 5 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKFGGDS*PLLEVV
Trigger: GACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS GCA 90 bp GGTTTAATGGGAGGAAACTGTATAACTCCCTCAATCTTTTCCTTCTaGCGAGAGGCCTCTTCCTCAAAGTCAACCGCTAAAGCCACTTCA +
Preference number: 5 (lower is better)
Translates to: GLMGGNCITPSIFSF*REASSSKSTAKATS
Trigger: TGAAGTGGCTTTAGCGGTTGACTTTGAGGAAGAGGCCTCTCGGCAGAAGGAAAAGATTGAGGGAGTTATACAGTTTCCTCCCATTAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTTGGTCTGTCACGCGGTaGGGGATGGTGTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: IHTFASPMIQYKIVTIASWSVTR*GMVSGM
Trigger: CATCCCCGACACCATCCCCAACCGCGTGACAGACCA...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp AACACTCAAAAGGAAATGATCCAATCTCACAATAAGCTCCCAACTGAACGGGTATCCTCCTTGGTGATCTaGCGCTTCAGCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: NTQKEMIQSHNKLPTERVSSLVI*RFSAFS
Trigger: GGAAAAGGCGCTGAAGCGCAAGATCACCAAGGAGGA...TACCCGTTCAGTTGGGAGCTTATTGTGAGATTGGATCATTTCCTTTTGAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS-3UTR CAA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTCCTCCTTGGTGATCTaGCGCTTCAGCGCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKSSLVI*RFSAFS
Trigger: GGAAAAGGCGCTGAAGCGCAAGATCACCAAGGAGGA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGTCCTCCTTTCCCCGTTaGGAGCCGGCTAGGTTTTTG +
Preference number: 5 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKSSFPR*EPARFL
Trigger: CAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGA...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CGCAGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGCTCCCCCAAGTCATTTaGGCTGGCACACTGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RRNSLKIHTFASPMIQYKLPQVI*AGTLSE
Trigger: CTCAGACAGTGTGCCAGCCAAAATGACTTGGGGGAG...CTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS GCA 90 bp TCTTCCTACGATGACAAAGGGCAGAAGTTAGTTCCACCATCAGGGTaGCAGATTTGGGTTCCGCACAGATTCTCTTCACGTTTTTACAAA +
Preference number: 5 (lower is better)
Translates to: SSYDDKGQKLVPPSG*QIWVPHRFSSRFYK
Trigger: TTTGTAAAAACGTGAAGAGAATCTGTGCGGAACCCAAATCTGGCACCCTGATGGTGGAACTAACTTCTGCCCTTTGTCATCGTAGGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp AGGAACTCACTTAAAATACACACATTTGCTTCCCCCATGATCCAATATAAGATTATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACC +
Preference number: 5 (lower is better)
Translates to: RNSLKIHTFASPMIQYKIMLHHL*GSPGST
Trigger: GGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCAT...AATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTATTTTAAGTGAGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTGCGAACTCGCTGTCTTaGCCGTCCTCCTTTCCCCGT +
Preference number: 5 (lower is better)
Translates to: IHTFASPMIQYKIVTIASANSLS*PSSFPR
Trigger: ACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGC...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS-3UTR CAA 90 bp CACTTTAATGTAACTTCAAGCCCAAACATTCTGGGAGGTAAACAGTCTCTTGGTATCAGGGTGCCAGATTaGGGTTCCGCACAGATTCTC +
Preference number: 5 (lower is better)
Translates to: HFNVTSSPNILGGKQSLGIRVPD*GSAQIL
Trigger: GAGAATCTGTGCGGAACCCAAATCTGGCACCCTGAT...ACCAAGAGACTGTTTACCTCCCAGAATGTTTGGGCTTGAAGTTACATTAAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS-3UTR CAA 90 bp ATACACACATTTGCTTCCCCCATGATCCAATATAAGATTGTTACTATTGCTTCTTCAGAACTCTTAGCCTaGAACTTTGTACAATGGGTT +
Preference number: 5 (lower is better)
Translates to: IHTFASPMIQYKIVTIASSELLA*NFVQWV
Trigger: AACCCATTGTACAAAGTTCAAGGCTAAGAGTTCTGA...AGAAGCAATAGTAACAATCTTATATTGGATCATGGGGGAAGCAAATGTGTGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310074.8
ENST00000515646.1
CDS TCA 72 bp TGGTCCAGCCGCCCTCGGCCTCGGGCCCCCAGAGCGTaGAGCGCCCGCCGTCCACCAGCTGGTAGCCGTGGT +
Preference number: 6 (lower is better)
Translates to: WSSRPRPRAPRA*SARRPPAGSRG
Trigger: ACCACGGCTACCAGCTGGTGGACGGCGGGCGCTTCACGCTCTGGGGGCCCGAGGCCGAGGGCGGCTGGACCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS GCA 72 bp AGCACTCGGGGCACAGCTCGATGTCCTGGCACTCGGTaGAGCGGAAGCGCAGCGGGCTCACCTCGGCCAGGC +
Preference number: 6 (lower is better)
Translates to: STRGTARCPGTR*SGSAAGSPRPG
Trigger: GCCTGGCCGAGGTGAGCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS CCA 72 bp CCGGCCGAGAAGCACTCGGGGCACAGCTCGATGTCCTaGCACTCGGTGCAGCGGAAGCGCAGCGGGCTCACC +
Preference number: 6 (lower is better)
Translates to: PAEKHSGHSSMS*HSVQRKRSGLT
Trigger: GGTGAGCCCGCTGCGCTTCCGCTGCACCGAGTGCCAGGACATCGAGCTGTGCCCCGAGTGCTTCTCGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS CCA 72 bp GGCCTCCGCTGGGACAGGTGTGGTCTGTCACGCGGTTaGGGATGGTGTCGGGGATGCAGGCCTTCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: GLRWDRCGLSRG*GWCRGCRPSPG
Trigger: ACCTGGGGAAGGCCTGCATCCCCGACACCATCCCCAACCGCGTGACAGACCACACCTGTCCCAGCGGAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310074.8
ENST00000506692.1
ENST00000510704.1
ENST00000512388.1
ENST00000515646.1
CDS TCA 72 bp CTGCAGCGCTGCCTGCAGCACTGCCAGAGGCCCAGCTaGAACCAGAGGGACCGCCACCCCATCCAGGCTGAT +
Preference number: 6 (lower is better)
Translates to: LQRCLQHCQRPS*NQRDRHPIQAD
Trigger: ATCAGCCTGGATGGGGTGGCGGTCCCTCTGGTTTCAGCTGGGCCTCTGGCAGTGCTGCAGGCAGCGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS TCA 72 bp CCACCCGCTGGAAAAGCAAGGGCCAGGACACCTCTGTaGCGCTTGTCCTGGCCGCACACCCATCCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: PPAGKARARTPL*RLSWPHTHPGL
Trigger: AAGGCCAGGATGGGTGTGCGGCCAGGACAAGCGTCACAGAGGTGTCCTGGCCCTTGCTTTTCCAGCGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 72 bp CAGGAACGGATGGGATCCCACAGCTGGGGCTTCCTCTaGCACACATGCCTGGAGCCGAGGTGCTGGACCCTT +
Preference number: 6 (lower is better)
Translates to: QERMGSHSWGFL*HTCLEPRCWTL
Trigger: AAGGGTCCAGCACCTCGGCTCCAGGCATGTGTGCCAGAGGAAGCCCCAGCTGTGGGATCCCATCCGTTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CAA 90 bp CAGCAGGCAGACGACCTGCAGTGGTACCACCAGGAGCTGGGCCAGTaGAAGCGGCAGTGCCAGGAGAAGCTCACCAGGGTGGAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: QQADDLQWYHQELGQ*KRQCQEKLTRVEKE
Trigger: CTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCGCTTCAACTGGCCCAGCTCCTGGTGGTACCACTGCAGGTCGTCTGCCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS GCA 72 bp TGGTACCACCAGGAGCTGGGCCAGTTGAAGCGGCAGTaGCAGGAGAAGCTCACCAGGGTGGAGAAGGAGTGG +
Preference number: 6 (lower is better)
Translates to: WYHQELGQLKRQ*QEKLTRVEKEW
Trigger: CCACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTGCCGCTTCAACTGGCCCAGCTCCTGGTGGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS TCA 72 bp GCGCTGCCTCGTACTCTGCCGACTCTTCCATCTTGGTaGTCCCGTTTCGCCGGTACCGCTGCAGTTCTCGGA +
Preference number: 6 (lower is better)
Translates to: ALPRTLPTLPSW*SRFAGTAAVLG
Trigger: TCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 72 bp CAGTGCCAGGAGAAGCTCACCAGGGTGGAGAAGGAGTaGCGACGCTTCCAGGCACTCAAGAAGCAGGTGGTG +
Preference number: 6 (lower is better)
Translates to: QCQEKLTRVEKE*RRFQALKKQVV
Trigger: CACCACCTGCTTCTTGAGTGCCTGGAAGCGTCGCCACTCCTTCTCCACCCTGGTGAGCTTCTCCTGGCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS CCA 72 bp GGGACCGCCACCCCATCCAGGCTGATGACTATGAGCTaGCGTCTGGGAGAGAAGTGTTCTGGGCTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: GTATPSRLMTMS*RLGEKCSGLQE
Trigger: TTCCTGGAGCCCAGAACACTTCTCTCCCAGACGCCAGCTCATAGTCATCAGCCTGGATGGGGTGGCGGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 72 bp TCCATCACCTCTTGGGGAGTCCGGGAAGCACCAACGTaGGCAGCCATATCTTCCTCGGCCAGGCAGTACACG +
Preference number: 6 (lower is better)
Translates to: SITSWGVREAPT*AAISSSARQYT
Trigger: CGTGTACTGCCTGGCCGAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512388.1
CDS CAA 72 bp TGCCGCGCTGCCTCGTACTCTGCCGACTCTTCCATCTaGGTGATCCCGTTTCGCCGGTACCGCTGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: CRAASYSADSSI*VIPFRRYRCSS
Trigger: AGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 72 bp CCTGGAAGGTTCTCAATGGCGGCGAACTCGCTGTCTTaGCCGTCCTCCTTTCCCCGTTTGGAGCCGGCTAGG +
Preference number: 6 (lower is better)
Translates to: PGRFSMAANSLS*PSSFPRLEPAR
Trigger: CCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 72 bp CTCATTCAGACTAGAAAACGGGCTTGTGCCAGGGTGTaGGACCAGGCCAAGTCCACGGCACTGCAGGAGGGG +
Preference number: 6 (lower is better)
Translates to: LIQTRKRACARV*DQAKSTALQEG
Trigger: CCCCTCCTGCAGTGCCGTGGACTTGGCCTGGTCTCACACCCTGGCACAAGCCCGTTTTCTAGTCTGAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS TCA 72 bp CTGGCACAAGGTCTTGGGGTGAGCTGGTGGCAGAGCTaGGGCCAGAACCCCTGGCTGAGGTTTGGACTTTGT +
Preference number: 6 (lower is better)
Translates to: LAQGLGVSWWQS*GQNPWLRFGLC
Trigger: ACAAAGTCCAAACCTCAGCCAGGGGTTCTGGCCTCAGCTCTGCCACCAGCTCACCCCAAGACCTTGTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 72 bp CCTCTTCTCCCGTTTATGCCGCGCTGCCTCGTACTCTaGCGACTCTTCCATCTTGGTGATCCCGTTTCGCCG +
Preference number: 6 (lower is better)
Translates to: PLLPFMPRCLVL*RLFHLGDPVSP
Trigger: CGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS GCA 72 bp CTGGAAGGTTCTCAATGGCGGCGAACTCGCTGTCTTTaGCGTCCTCCTTTCCCCGTTTGGAGCCGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: LEGSQWRRTRCL*RPPFPVWSRLG
Trigger: ACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS GCA 72 bp CGACCAGAGGAGCCCACCTGGTACTGCCATAAACCCTaGACTCAGGGGCTGTCTGAATGTCCCAGGAGACAG +
Preference number: 6 (lower is better)
Translates to: RPEEPTWYCHKP*TQGLSECPRRQ
Trigger: CTGTCTCCTGGGACATTCAGACAGCCCCTGAGTGCAGGGTTTATGGCAGTACCAGGTGGGCTCCTCTGGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 72 bp GTGGCAGAGCTGAGGCCAGAACCCCTGGCTGAGGTTTaGACTTTGTTCTCATTCCCCACCTGCGACCAGAGG +
Preference number: 6 (lower is better)
Translates to: VAELRPEPLAEV*TLFSFPTCDQR
Trigger: CCTCTGGTCGCAGGTGGGGAATGAGAACAAAGTCCAAACCTCAGCCAGGGGTTCTGGCCTCAGCTCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CAA 90 bp TCCCGTTTATGCCGCGCTGCCTCGTACTCTGCCGACTCTTCCATCTaGGTGATCCCGTTTCGCCGGTACCGCTGCAGTTCTCGGATCTTG +
Preference number: 6 (lower is better)
Translates to: SRLCRAASYSADSSI*VIPFRRYRCSSRIL
Trigger: CAAGATCCGAGAACTGCAGCGGTACCGGCGAAACGGGATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 72 bp TCCATCACCTCTTGGGGAGTCCGGGAAGCACCAACGTaGGCAGCCATATCTTCCCAGTTTCCGAAGCCGAAC +
Preference number: 6 (lower is better)
Translates to: SITSWGVREAPT*AAISSQFPKPN
Trigger: GTTCGGCTTCGGAAACTGGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS CCA 72 bp TGTCTCTCTTTCAGCTTCCGCACGTACATGTCCACGTaGGCGCGCTTCAGCTCGATCTCCACGTCGTCGTCA +
Preference number: 6 (lower is better)
Translates to: CLSFSFRTYMST*ARFSSISTSSS
Trigger: TGACGACGACGTGGAGATCGAGCTGAAGCGCGCCCACGTGGACATGTACGTGCGGAAGCTGAAAGAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310074.8
ENST00000510704.1
ENST00000512388.1
ENST00000515646.1
CDS CCA 72 bp TGGCGTGGCCCTTTCCTAGGCAGTGACTGCAGAAGATaGGCCTGTGGCTCTTCAAGGGAGCAGGCCTTCATT +
Preference number: 6 (lower is better)
Translates to: WRGPFLGSDCRR*ACGSSREQAFI
Trigger: AATGAAGGCCTGCTCCCTTGAAGAGCCACAGGCCCATCTTCTGCAGTCACTGCCTAGGAAAGGGCCACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510704.1
ENST00000515646.1
CDS CCA 72 bp TCCATCACCTCTTGGGGAGTCCGGGAAGCACCAACGTaGGCAGCCATATCTTCCTCTGTGACGCTTGTCCTG +
Preference number: 6 (lower is better)
Translates to: SITSWGVREAPT*AAISSSVTLVL
Trigger: CAGGACAAGCGTCACAGAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510704.1
CDS CAA 90 bp CAGGTTCCCGTGGATGTACATGCTCACGTAATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACCAACGTGGGCAGCCATATCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QVPVDVHAHVMLHHL*GSPGSTNVGSHIFP
Trigger: TGGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310074.8
CDS CAA 90 bp CTGTCTTTGCCGTCCTCCTTTCCCCGTTTGGAGCCGGCTAGGTTTTaGTTCTCCTTCCTCTTCTCCCGTTTATGCCGCGCTGCCTCGTAC +
Preference number: 6 (lower is better)
Translates to: LSLPSSFPRLEPARF*FSFLFSRLCRAASY
Trigger: GTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 90 bp AGCTCGAAGCCTGGAAGGTTCTCAATGGCGGCGAACTCGCTGTCTTaGCCGTCCTCCTTTCCCCGTTTGGAGCCGGCTAGGTTTTTGTTC +
Preference number: 6 (lower is better)
Translates to: SSKPGRFSMAANSLS*PSSFPRLEPARFLF
Trigger: GAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGAGAACCTTCCAGGCTTCGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 90 bp CAGGTTCCCGTGGATGTACATGCTCACGTAATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACCAACGTGGGCAGCCATATCTTCCTG +
Preference number: 6 (lower is better)
Translates to: QVPVDVHAHVMLHHL*GSPGSTNVGSHIFL
Trigger: CAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506692.1
CDS CAA 90 bp CAGGTTCCCGTGGATGTACATGCTCACGTAATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACCAACGTGGGCAGCCATATCTTCCTC +
Preference number: 6 (lower is better)
Translates to: QVPVDVHAHVMLHHL*GSPGSTNVGSHIFL
Trigger: GAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510704.1
ENST00000512388.1
CDS CCA 72 bp TCCATCACCTCTTGGGGAGTCCGGGAAGCACCAACGTaGGCAGCCATATCTTCCTACGATGACAAAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SITSWGVREAPT*AAISSYDDKGQ
Trigger: CTGCCCTTTGTCATCGTAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CAA 72 bp GTGGATGTACATGCTCACGTAATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACCAACGTGGGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: VDVHAHVMLHHL*GSPGSTNVGSH
Trigger: ATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310074.8
ENST00000506692.1
ENST00000510704.1
ENST00000512388.1
ENST00000515646.1
CDS CAA 90 bp CAGGTTCCCGTGGATGTACATGCTCACGTAATGCTCCATCACCTCTaGGGGAGTCCGGGAAGCACCAACGTGGGCAGCCATATCTTCCTA +
Preference number: 6 (lower is better)
Translates to: QVPVDVHAHVMLHHL*GSPGSTNVGSHIFL
Trigger: TAGGAAGATATGGCTGCCCACGTTGGTGCTTCCCGGACTCCCCAAGAGGTGATGGAGCATTACGTGAGCATGTACATCCACGGGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 72 bp CAGTCACGTAGCGGGCTGGACTCAAGTTTAAAGAGCTaGAGAGCACCTTCTCGCGATCTGACAGGAGCTCGA +
Preference number: 6 (lower is better)
Translates to: QSRSGLDSSLKS*RAPSRDLTGAR
Trigger: TCGAGCTCCTGTCAGATCGCGAGAAGGTGCTCTGCAGCTCTTTAAACTTGAGTCCAGCCCGCTACGTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 72 bp GCGAACTCGCTGTCTTTGCCGTCCTCCTTTCCCCGTTaGGAGCCGGCTAGGTTTTTGTTCTCCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ANSLSLPSSFPR*EPARFLFSFLF
Trigger: GAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 90 bp TCAATGGCGGCGAACTCGCTGTCTTTGCCGTCCTCCTTTCCCCGTTaGGAGCCGGCTAGGTTTTTGTTCTCCTTCCTCTTCTCCCGTTTA +
Preference number: 6 (lower is better)
Translates to: SMAANSLSLPSSFPR*EPARFLFSFLFSRL
Trigger: TAAACGGGAGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCGCCGCCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CCA 72 bp CGAACTCGCTGTCTTTGCCGTCCTCCTTTCCCCGTTTaGAGCCGGCTAGGTTTTTGTTCTCCTTCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: RTRCLCRPPFPV*SRLGFCSPSSS
Trigger: AGAAGAGGAAGGAGAACAAAAACCTAGCCGGCTCCAAACGGGGAAAGGAGGACGGCAAAGACAGCGAGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 72 bp GGAAGCACCAACGTGGGCAGCCATATCTTCCTACGATaGCAAAGGGCAGAAGTTAGTTCCACCATCAGGGTG +
Preference number: 6 (lower is better)
Translates to: GSTNVGSHIFLR*QRAEVSSTIRV
Trigger: CACCCTGATGGTGGAACTAACTTCTGCCCTTTGTCATCGTAGGAAGATATGGCTGCCCACGTTGGTGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 72 bp TTTGTTCTCCTTCCTCTTCTCCCGTTTATGCCGCGCTaGCTCGTACTCTGCCGACTCTTCCATCTTGGTGAT +
Preference number: 6 (lower is better)
Translates to: FVLLPLLPFMPR*LVLCRLFHLGD
Trigger: ATCACCAAGATGGAAGAGTCGGCAGAGTACGAGGCAGCGCGGCATAAACGGGAGAAGAGGAAGGAGAACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS GCA 72 bp TCAAAGTCAACCGCTAAAGCCACTTCAGAAAGTAACTaGCCAAAGTGCGCACTCATTCCCTGGCCACCGCCT +
Preference number: 6 (lower is better)
Translates to: SKSTAKATSESN*PKCALIPWPPP
Trigger: AGGCGGTGGCCAGGGAATGAGTGCGCACTTTGGGCAGTTACTTTCTGAAGTGGCTTTAGCGGTTGACTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS GCA 72 bp GATGACAAAGGGCAGAAGTTAGTTCCACCATCAGGGTaGCAGATTTGGGTTCCGCACAGATTCTCTTCACGT +
Preference number: 6 (lower is better)
Translates to: DDKGQKLVPPSG*QIWVPHRFSSR
Trigger: ACGTGAAGAGAATCTGTGCGGAACCCAAATCTGGCACCCTGATGGTGGAACTAACTTCTGCCCTTTGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS CCA 72 bp CCCCAAAGGCATTCAGTCACACACTGTCTTATGAGCTaGGCTCAGGGGAGAGATGACAATGTTGAAGCAACA +
Preference number: 6 (lower is better)
Translates to: PQRHSVTHCLMS*AQGRDDNVEAT
Trigger: TGTTGCTTCAACATTGTCATCTCTCCCCTGAGCCCAGCTCATAAGACAGTGTGTGACTGAATGCCTTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515646.1
CDS TCA 72 bp TGTTTTCAAAAAGGTCATCAAACTCCTTGCATGACATaGACTGGTACAGCGGCCTCAGCTTCAGGCGCAGCT +
Preference number: 6 (lower is better)
Translates to: CFQKGHQTPCMT*TGTAASASGAA
Trigger: AGCTGCGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS TCA 72 bp GTGCATGTTTTCAAAAAGGTCATCAAACTCCTTGCATaGCATGAACTGGTACAGCGGCCTCAGCTTCAGGCG +
Preference number: 6 (lower is better)
Translates to: VHVFKKVIKLLA*HELVQRPQLQA
Trigger: CGCCTGAAGCTGAGGCCGCTGTACCAGTTCATGTCATGCAAGGAGTTTGATGACCTTTTTGAAAACATGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 72 bp CAGGTAGCTAGGAAGGCGGCTTTTGGAGGGGATTCCTaGCCGCTTCTGGAGGTGGTCTTTAATTATAATAGT +
Preference number: 6 (lower is better)
Translates to: QVARKAAFGGDS*PLLEVVFNYNS
Trigger: ACTATTATAATTAAAGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAGCTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1
CDS CAA 90 bp GACTTTGTCCAGGTAGCTAGGAAGGCGGCTTTTGGAGGGGATTCCTaGCCGCTTCTGGAGGTGGTCTTTAATTATAATAGTCTTCACAGT +
Preference number: 6 (lower is better)
Translates to: DFVQVARKAAFGGDS*PLLEVVFNYNSLHS
Trigger: ACTGTGAAGACTATTATAATTAAAGACCACCTCCAGAAGCGGCAAGGAATCCCCTCCAAAAGCCGCCTTCCTAGCTACCTGGACAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310074.8
ENST00000512388.1
ENST00000515646.1