RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TADA2A (Homo sapiens)

Ensembl gene IDs: ENSG00000276234, ENSG00000277104

Ensembl transcript IDs: ENST00000610834.4, ENST00000612272.4, ENST00000614112.4, ENST00000614122.4, ENST00000615182.5, ENST00000615328.4, ENST00000616284.1, ENST00000617828.4, ENST00000619335.4, ENST00000619777.4, ENST00000620086.4, ENST00000620367.4, ENST00000620628.4, ENST00000620838.4, ENST00000621780.1, ENST00000622522.2, ENST00000631413.1, ENST00000631626.1, ENST00000632146.1, ENST00000632354.1, ENST00000632358.1, ENST00000632509.1, ENST00000632750.1, ENST00000632804.1, ENST00000633431.1, ENST00000633468.1, ENST00000633475.1, ENST00000633584.1

Found 728 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGGTaGGTTCAGGACACATGTGACAGCAGACAGTGCAGCGTGATGGGG +
Preference number: 1 (lower is better)
Translates to: SSGAWYPGKPRAKTG*VQDTCDSRQCSVMG
Trigger: CCCCATCACGCTGCACTGTCTGCTGTCACATGTGTCCTGAACTCACCCTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 90 bp GGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGGATATACTGGAGAACTTCTGAGAGC +
Preference number: 1 (lower is better)
Translates to: GLRPESMSACRRSHC*QALLSWIYWRTSES
Trigger: GCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR TCA 90 bp TCCTGGGAAACCCAGGGCAAAAACAGGGTGAGTTCAGGACACATGTaGCAGCAGACAGTGCAGCGTGATGGGGCAGGCATCCAACACCTT +
Preference number: 1 (lower is better)
Translates to: SWETQGKNRVSSGHM*QQTVQRDGAGIQHL
Trigger: AAGGTGTTGGATGCCTGCCCCATCACGCTGCACTGTCTGCTGTCACATGTGTCCTGAACTCACCCTGTTTTTGCCCTGGGTTTCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR GCA 90 bp GAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCCTGGATATACTGGAGAACTTCTGAG +
Preference number: 1 (lower is better)
Translates to: EGLRPESMSACRRSH*WQALLSWIYWRTSE
Trigger: CTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 90 bp TGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTGGATATACTaGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGCTCTTCCTCC +
Preference number: 1 (lower is better)
Translates to: CRRSHCWQALLSWIY*RTSESIVRLRRSSS
Trigger: GGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 90 bp ATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTaGATATACTGGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGC +
Preference number: 1 (lower is better)
Translates to: MSACRRSHCWQALLS*IYWRTSESIVRLRR
Trigger: GCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR TCA 90 bp CCACTGCTGGCAAGCACTACTGTCCTGGATATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAGGCGCTCTTCCTCCCGTGTCTTCTT +
Preference number: 1 (lower is better)
Translates to: PLLASTTVLDILENF*EHSAFKALFLPCLL
Trigger: AAGAAGACACGGGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR GCA 90 bp ATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGG +
Preference number: 1 (lower is better)
Translates to: MAFNEFVMFHWPHNS*KSPHCFIQVLDLLG
Trigger: CCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 90 bp CTTCTGAGACAATCTGGAGAGACCTCTATCAGTGTAGTTGGTTTATaGCCAACCCTGTCTAGAAGCAAAGAGGAAGGATGCAATGCTACG +
Preference number: 1 (lower is better)
Translates to: LLRQSGETSISVVGL*PTLSRSKEEGCNAT
Trigger: CGTAGCATTGCATCCTTCCTCTTTGCTTCTAGACAGGGTTGGCCATAAACCAACTACACTGATAGAGGTCTCTCCAGATTGTCTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR GCA 90 bp CCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATaGCCACCCATATTGTCCTTTGACCCACCACATTCCAAACTTCTG +
Preference number: 1 (lower is better)
Translates to: PVFTMRIQLKNNSPE*PPILSFDPPHSKLL
Trigger: CAGAAGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR CCA 90 bp GTTCTGGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTaGAGCCTCTTGATTTCCCTTCGGAGTTCAAATTCCAATGCATGG +
Preference number: 1 (lower is better)
Translates to: VLALQKLVMPAVLYS*SLLISLRSSNSNAW
Trigger: CCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR GCA 90 bp AGCAGTTTTTGCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGATGAAATGCTTCATATAGTGCTTCTC +
Preference number: 1 (lower is better)
Translates to: SSFCFLCLFQVQQGR*KQRVIDEMLHIVLL
Trigger: GAGAAGCACTATATGAAGCATTTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR CCA 90 bp AGACAGATAATCAGCAAACTTACCTCGCAATATAAGGATCTGAGCTaGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCTACCA +
Preference number: 1 (lower is better)
Translates to: RQIISKLTSQYKDLS*TPGITDCGLVPFLP
Trigger: TGGTAGAAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCGAGGTAAGTTTGCTGATTATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR CCA 90 bp CTTCTTATTCTGCAGAAACGTTTGAGGACCAAGTTTTACATGTGGTaGGGCTACTTACCCTCATATCTAGTGAGTCCCATATATAAAGCT +
Preference number: 1 (lower is better)
Translates to: LLILQKRLRTKFYMW*GYLPSYLVSPIYKA
Trigger: AGCTTTATATATGGGACTCACTAGATATGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGTCCTCAAACGTTTCTGCAGAATAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 90 bp TGGCTTCTTATTCTGCAGAAACGTTTGAGGACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCATATCTAGTGAGTCCCATATATAAA +
Preference number: 1 (lower is better)
Translates to: WLLILQKRLRTKFYM*WGYLPSYLVSPIYK
Trigger: TTTATATATGGGACTCACTAGATATGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGTCCTCAAACGTTTCTGCAGAATAAGAAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 90 bp TTCAAATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTC +
Preference number: 1 (lower is better)
Translates to: FKFQCMAFNEFVMFH*PHNSCKSPHCFIQV
Trigger: GACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp GGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: GLRPESMSACRRSHCWQAPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...TGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp CAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 2 (lower is better)
Translates to: QAGINVSLPAEPLLASTTPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...AGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGCAGACAGTGCAGCGTaGTGGGGCAGGCATCCAACA +
Preference number: 2 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQADSAA*WGRHPT
Trigger: TGTTGGATGCCTGCCCCATCACGCTGCACTGTCTGC...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp CGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RLPEFEAIGMEGLRPESMRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...CATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAGGCGGGCAGATCACCTaGGGTCAGGAGTTTGTGACC +
Preference number: 2 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPGGQIT*GQEFVT
Trigger: GGTCACAAACTCCTGACCTCAGGTGATCTGCCCGCC...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGAGTTCAGGACACATGTaGCAGCAGACAGTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQSSGHM*QQTVQR
Trigger: ACGCTGCACTGTCTGCTGTCACATGTGTCCTGAACT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 2 (lower is better)
Translates to: AIGMEGLRPESMSACRRSWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CAA 90 bp CCAAGCAAAGCTGAGGTTTGTTGCATCATCTCCATCCTCAGGGGCTaGGTATCCTGGGAAACCCAGGGCAAAAACAGGGTGAGTTCAGGA +
Preference number: 2 (lower is better)
Translates to: PSKAEVCCIISILRG*VSWETQGKNRVSSG
Trigger: TCCTGAACTCACCCTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATGCAACAAACCTCAGCTTTGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp ATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 2 (lower is better)
Translates to: IGMEGLRPESMSACRRSHWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...GTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp AAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: KPLEWKDSGRNQCQLAGGILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...TCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR GCA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 2 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAAGTGAGCTGAGATCTTaGCATCACACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPSELRS*HHTPAW
Trigger: CCAGGCTGGAGTGTGATGGCAAGATCTCAGCTCACT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCAGTGAGCTGAGATCTTaGCATCACACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSSELRS*HHTPAW
Trigger: CCAGGCTGGAGTGTGATGGCAAGATCTCAGCTCACT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAAACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 2 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR CCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAATCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 2 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR CAA 90 bp ATTTGTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCGTTCCA +
Preference number: 2 (lower is better)
Translates to: ICHVPLAPQFLQIAS*FHTGPGPPWDTAVP
Trigger: TGGAACGGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp GGTGGTGCACTCCGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: GGALRLPEFEAIGMEGLRILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...CCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR GCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTGTGATCTCAGCTCGCTaGAACCTCTGCCTCCTGTGT +
Preference number: 2 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPVISAR*NLCLLC
Trigger: ACACAGGAGGCAGAGGTTGCAGCGAGCTGAGATCAC...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 2 (lower is better)
Translates to: AIGMEGLRPESMSACRRSVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CCA 90 bp AAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 2 (lower is better)
Translates to: KPLEWKDSGRNQCQLAGGFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...TCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCATCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp GCACTCCGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 2 (lower is better)
Translates to: ALRLPEFEAIGMEGLRPEFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...TTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTGTCTTGGTGCACATTTaGTTGGCTACATCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFVLVHI*LATSCF
Trigger: AAAGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTAGTTCAGGACACATGTaGCAGCAGACAGTGCAGCGT +
Preference number: 2 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMASSGHM*QQTVQR
Trigger: ACGCTGCACTGTCTGCTGTCACATGTGTCCTGAACT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR TCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCCAATCCAAGCAAAGCTaGGGTTTGTTGCATCATCTC +
Preference number: 2 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSQSKQS*GLLHHL
Trigger: GAGATGATGCAACAAACCTCAGCTTTGCTTGGATTG...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCATCACACTCCAGCCTaGAGGACAAGAGCAAACTCT +
Preference number: 2 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPHHTPA*RTRANS
Trigger: AGAGTTTGCTCTTGTCCTCCAGGCTGGAGTGTGATG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSTKFYM*WGYLPS
Trigger: TGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR TCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 2 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp GCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 2 (lower is better)
Translates to: ASSACFRFSRVDANRGLLTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...CAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR CCA 90 bp GCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 2 (lower is better)
Translates to: ASSACFRFSRVDANRGLLSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...CAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR GCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCAAAAGCAGCTTTTATTaGAGGCTAGCCTTTCACCAT +
Preference number: 2 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSKSSFY*RLAFHH
Trigger: ATGGTGAAAGGCTAGCCTGCAATAAAAGCTGCTTTT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp AATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 2 (lower is better)
Translates to: NSNAWLSMNLSCSTGPTIVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...AATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTTCTTATCCCTTAGATaGATCCCTTCCCAGCTGCAT +
Preference number: 2 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAFLSLR*IPSQLH
Trigger: ATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACAGGGGCTTGGTATCCTaGGAAACCCAGGGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNRGLVS*ETQGKN
Trigger: GTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMATKFYM*WGYLPS
Trigger: TGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTGTCAACTATTCGATGTaGTTTGTGTCGATTCTGACG +
Preference number: 2 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAVNYSM*FVSILT
Trigger: CGTCAGAATCGACACAAATCACATCGAATAGTTGAC...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAATGGTGCACATTTGATTaGCTACATCCTGCTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDEWCTFD*LHPAFS
Trigger: AGAGAAAGCAGGATGTAGCCAATCAAATGTGCACCA...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR CAA 90 bp CTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCAAATTCCAATGCATGGCTTTCAATG +
Preference number: 2 (lower is better)
Translates to: LQKLVMPAVLYSWSL*ISLRSSNSNAWLSM
Trigger: CATTGAAAGCCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGETHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR TCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR TCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTACCAGCACTGTGATGTaGGGTACTATGGTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFTSTVM*GTMVLL
Trigger: TAAAAGAACCATAGTACCTCACATCACAGTGCTGGT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR TCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACCGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR TCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR TCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACCAATCCAAGCAAAGCTaGGGTTTGTTGCATCATCTC +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNQSKQS*GLLHHL
Trigger: GAGATGATGCAACAAACCTCAGCTTTGCTTGGATTG...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 2 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR GCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR GCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 2 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR-3UTR GCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTACGAGAGCTTTCTTATaGTCTAAAACCTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPTRAFL*SKTFLF
Trigger: AAAGAGAAAGGTTTTAGAGCATAAGAAAGCTCTCGT...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTATAAGGATCTGAGCTaGACTCCTGGGATTACAGAC +
Preference number: 2 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLYKDLS*TPGITD
Trigger: GTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 2 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCACCAGCACTGTGATGTaGGGTACTATGGTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLTSTVM*GTMVLL
Trigger: TAAAAGAACCATAGTACCTCACATCACAGTGCTGGT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR GCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR GCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 2 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACTGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNCSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACAAAAGCAGCTTTTATTaGAGGCTAGCCTTTCACCAT +
Preference number: 2 (lower is better)
Translates to: FISYPLDESLPSCMHIYNKSSFY*RLAFHH
Trigger: ATGGTGAAAGGCTAGCCTGCAATAAAAGCTGCTTTT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR GCA 72 bp AGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCCTGGATATACTGGAGA +
Preference number: 3 (lower is better)
Translates to: RPESMSACRRSH*WQALLSWIYWR
Trigger: TCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp TGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTaGATATACTGGAGAACTTCTGAGAGCATAGTGCGT +
Preference number: 3 (lower is better)
Translates to: CRRSHCWQALLS*IYWRTSESIVR
Trigger: ACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp CCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGGATATACTGGAGAACT +
Preference number: 3 (lower is better)
Translates to: PESMSACRRSHC*QALLSWIYWRT
Trigger: AGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp TCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: SGRNQCQLAGGATAGKHYLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...GTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR TCA 72 bp GCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGGTaGGTTCAGGACACATGTGACAGCAGACAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: AWYPGKPRAKTG*VQDTCDSRQCS
Trigger: GCTGCACTGTCTGCTGTCACATGTGTCCTGAACTCACCCTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 3 (lower is better)
Translates to: AIGMEGLRPESMSACRRSLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR TCA 72 bp CTTTTTCATTCAGCTTCTCTGTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCACTCCGTCTACCTGAAT +
Preference number: 3 (lower is better)
Translates to: LFHSASLCQGGQ*GSRVVHSVYLN
Trigger: ATTCAGGTAGACGGAGTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCACAGAGAAGCTGAATGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp TGTTGCATCATCTCCATCCTCAGGGGCTTGGTATCCTaGGAAACCCAGGGCAAAAACAGGGTGAGTTCAGGA +
Preference number: 3 (lower is better)
Translates to: CCIISILRGLVS*ETQGKNRVSSG
Trigger: TCCTGAACTCACCCTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 72 bp GTGCACTCCGTCTACCTGAATTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCC +
Preference number: 3 (lower is better)
Translates to: VHSVYLNSKPLE*KDSGRNQCQLA
Trigger: GGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp AAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGATGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 3 (lower is better)
Translates to: KPLEWKDSGRNQCQLAGGWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...TCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR TCA 72 bp GCAAGCACTACTGTCCTGGATATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAGGCGCTCTTCCTCCCG +
Preference number: 3 (lower is better)
Translates to: ASTTVLDILENF*EHSAFKALFLP
Trigger: CGGGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp AGCCACTGCTGGCAAGCACTACTGTCCTGGATATACTaGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGC +
Preference number: 3 (lower is better)
Translates to: SHCWQALLSWIY*RTSESIVRLRR
Trigger: GCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAAATCTCTTGGCACCATaGTCCTTACACCCACTGCTG +
Preference number: 3 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPNLLAP*SLHPLL
Trigger: CAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR GCA 72 bp GGTTCAAGTCACAATCCAAGCAAAGCTGAGGTTTGTTaGATCATCTCCATCCTCAGGGGCTTGGTATCCTGG +
Preference number: 3 (lower is better)
Translates to: GSSHNPSKAEVC*IISILRGLVSW
Trigger: CCAGGATACCAAGCCCCTGAGGATGGAGATGATGCAACAAACCTCAGCTTTGCTTGGATTGTGACTTGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp GGCTCCAGGGACCAACCTCACCATCTGACAGAGCTCCTTTTCTTTTTCATTCAGCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 3 (lower is better)
Translates to: GSRDQPHHLTELLFFFIQLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...CTGAATGAAAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGTCCCTGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp CGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGCTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 3 (lower is better)
Translates to: RLPEFEAIGMEGLRPESMLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...CATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQNLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACTCCATCCTCAGGGGCTaGGTATCCTGGGAAACCCAG +
Preference number: 3 (lower is better)
Translates to: FISYPLDESLPSCMHIYNSILRG*VSWETQ
Trigger: CTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGA...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp CCGTGTCTTCTTGAGGTGATCGTAGGTTCTGGCACTACAAAAATTGGTAATGCCTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 3 (lower is better)
Translates to: PCLLEVIVGSGTTKIGNAWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...GGCATTACCAATTTTTGTAGTGCCAGAACCTACGATCACCTCAAGAAGACACGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp ATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGA +
Preference number: 3 (lower is better)
Translates to: IIVKFLNEICSS*HVPGHVPRKQG
Trigger: TCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR CCA 72 bp GAGCCACCTTGCCCGGCCGAAGTTAAAGATGCAGTTTaGGATAAGACCATCATAAGGATATTTTCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: EPPCPAEVKDAV*DKTIIRIFSSP
Trigger: AGGGGAAGAAAATATCCTTATGATGGTCTTATCCCAAACTGCATCTTTAACTTCGGCCGGGCAAGGTGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 72 bp CAATCTGGAGAGACCTCTATCAGTGTAGTTGGTTTATaGCCAACCCTGTCTAGAAGCAAAGAGGAAGGATGC +
Preference number: 3 (lower is better)
Translates to: QSGETSISVVGL*PTLSRSKEEGC
Trigger: GCATCCTTCCTCTTTGCTTCTAGACAGGGTTGGCCATAAACCAACTACACTGATAGAGGTCTCTCCAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 3 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR GCA 72 bp ACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATaGCCACCCATATTGTCCTTTGACCCACCACATTCC +
Preference number: 3 (lower is better)
Translates to: TMRIQLKNNSPE*PPILSFDPPHS
Trigger: GGAATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR CCA 72 bp CTGCAGAAACGTTTGAGGACCAAGTTTTACATGTGGTaGGGCTACTTACCCTCATATCTAGTGAGTCCCATA +
Preference number: 3 (lower is better)
Translates to: LQKRLRTKFYMW*GYLPSYLVSPI
Trigger: TATGGGACTCACTAGATATGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGTCCTCAAACGTTTCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 72 bp ATTCTGCAGAAACGTTTGAGGACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCATATCTAGTGAGTCCC +
Preference number: 3 (lower is better)
Translates to: ILQKRLRTKFYM*WGYLPSYLVSP
Trigger: GGGACTCACTAGATATGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGTCCTCAAACGTTTCTGCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR GCA 72 bp AATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTCATACAGGTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: NEFVMFHWPHNS*KSPHCFIQVLD
Trigger: GTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp ATCAGCAAACTTACCTCGCAATATAAGGATCTGAGCTaGACTCCTGGGATTACAGACTGTGGTTTAGTTCCA +
Preference number: 3 (lower is better)
Translates to: ISKLTSQYKDLS*TPGITDCGLVP
Trigger: TGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCGAGGTAAGTTTGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 3 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 3 (lower is better)
Translates to: FISYPLDESLPSCMHIYNECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CCA 72 bp CAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAATCGCCTCATTGTTTC +
Preference number: 3 (lower is better)
Translates to: QCMAFNEFVMFH*PHNSCKSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CCA 72 bp CTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTaGAGCCTCTTGATTTCCCTTCGGAGTTCAAATTCC +
Preference number: 3 (lower is better)
Translates to: LQKLVMPAVLYS*SLLISLRSSNS
Trigger: GGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 3 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 3 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 3 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR TCA 72 bp AAAAGCAGCTTTTATTGCAGGCTAGCCTTTCACCATTaGGAAATAGGGTTCAAGTCACAATCCAAGCAAAGC +
Preference number: 3 (lower is better)
Translates to: KSSFYCRLAFHH*EIGFKSQSKQS
Trigger: GCTTTGCTTGGATTGTGACTTGAACCCTATTTCTCAATGGTGAAAGGCTAGCCTGCAATAAAAGCTGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGENLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
3UTR-3UTR CAA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACATCTGTCTGCAGTGTTaGAAGGCAAGACAGATAATC +
Preference number: 3 (lower is better)
Translates to: FISYPLDESLPSCMHIYNICLQC*KARQII
Trigger: GATTATCTGTCTTGCCTTCAAACACTGCAGACAGAT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR TCA 72 bp CTGTGGTTTAGTTCCATTTCTACCAGCACTGTGATGTaGGGTACTATGGTTCTTTTAGTTACAAGAGGTGTT +
Preference number: 3 (lower is better)
Translates to: LWFSSISTSTVM*GTMVLLVTRGV
Trigger: AACACCTCTTGTAACTAAAAGAACCATAGTACCTCACATCACAGTGCTGGTAGAAATGGAACTAAACCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
3UTR-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 3 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCNLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: DSGRNQCQLAGGATAGKHGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...GTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp AAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGATGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KPLEWKDSGRNQCQLAGGCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...TCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp GCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTGGATATACTGGAGAGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ACRRSHCWQALLSWIYWRESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...TCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AIGMEGLRPESMSACRRSPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: AIGMEGLRPESMSACRRSRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTGGATATACTGGAGAGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: ACRRSHCWQALLSWIYWRVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...TCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp AGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: SHWNGRTQAGINVSLPAERAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...CTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCGGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CKSPHCFIQVLDLLGIPPESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...CGGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCATCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: GLRPESMSACRRSHCWQASHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...TGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GGCTCCAGGGACCAACCTCACCATCTGACAGAGCTCCTTTTCTTTTTCATTCAGCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GSRDQPHHLTELLFFFIQRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...CTGAATGAAAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGTCCCTGGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp TTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FLQIASLFHTGPGPPWDTCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...GGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp TTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: FLQIASLFHTGPGPPWDTCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...GGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
3UTR CAA 72 bp GCTGAGGTTTGTTGCATCATCTCCATCCTCAGGGGCTaGGTATCCTGGGAAACCCAGGGCAAAAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: AEVCCIISILRG*VSWETQGKNRV
Trigger: CACCCTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATGCAACAAACCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCCCGGGAGAAGGAAGTaGGGCACTTCGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLPGRRK*GTSPGR
Trigger: CCTGCCCGGCGAAGTGCCTCACTTCCTTCTCCCGGG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGGCAGGAGTCCACGTTaGGAGGAGGAAAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTGRSPR*EEERRR
Trigger: CCTGCGCCTTTCCTCCTCCCAACGTGGACTCCTGCC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp AAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGTTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: KDSGRNQCQLAGGATAGKFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...CTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp AAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: KDSGRNQCQLAGGATAGKLSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...CTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTCAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: QAGINVSLPAEPLLASTTQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...AGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CAA 72 bp CCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTaGGCACCATTGTCCTTACACCCACTGCTGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PSCPLCSSQINL*APLSLHPLLPP
Trigger: TGGAGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CAA 72 bp AGGGTGGTGCACTCCGTCTACCTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGCCGGAATCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: RVVHSVYLNSKP*EWKDSGRNQCQ
Trigger: CTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCACCACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTGCAGACAGTGCAGCGTaGTGGGGCAGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPADSAA*WGRHPT
Trigger: TGTTGGATGCCTGCCCCATCACGCTGCACTGTCTGC...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAGTGATCTCAGCTCGCTaGAACCTCTGCCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPVISAR*NLCLLC
Trigger: ACACAGGAGGCAGAGGTTGCAGCGAGCTGAGATCAC...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAACTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp TTGTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LSCSTGPTILANRLIVSYRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...GTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCCCGGGAGAAGGAAGTaGGGCACTTCGCCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQPGRRK*GTSPGR
Trigger: CCTGCCCGGCGAAGTGCCTCACTTCCTTCTCCCGGG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR TCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAATGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGTGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp AAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: KDSGRNQCQLAGGATAGKRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...CTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GGTGGTGCACTCCGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGTGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: GGALRLPEFEAIGMEGLRCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...CCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCACCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GCACTCCGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: ALRLPEFEAIGMEGLRPECTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...TTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTGGCGGGCAGATCACCTaGGGTCAGGAGTTTGTGACC +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAGGQIT*GQEFVT
Trigger: GGTCACAAACTCCTGACCTCAGGTGATCTGCCCGCC...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATATGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPICRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CGGAGTTCAAATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: RSSNSNAWLSMNLSCSTGCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...GCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATTTGAACTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAGCTCGCTGCAACCTCTaGCTCCTGTGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPARCNL*LLCSSN
Trigger: ATTGCTTGAACACAGGAGGCAGAGGTTGCAGCGAGC...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACAAATCCTTACGGGGTaGGACCGGCCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGQILTG*DRPGPV
Trigger: GACTGGCCCAGGCCGGTCCCACCCCGTAAGGATTTG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCAAATCCTTACGGGGTaGGACCGGCCTGGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLQILTG*DRPGPV
Trigger: GACTGGCCCAGGCCGGTCCCACCCCGTAAGGATTTG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp TCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: SGRNQCQLAGGATAGKHYVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...GTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: SHWNGRTQAGINVSLPAELSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...CTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: LANRLIVSYRSWTSLGYRSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
3UTR CAA 72 bp GTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGACCTCCTTGGGATACC +
Preference number: 4 (lower is better)
Translates to: VPLAPQFLQIAS*FHTGPGPPWDT
Trigger: GGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAACTCAAAGCCTCGAGTaGAACACTGCAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPTQSLE*NTASRG
Trigger: TCCTCTGCTTGCAGTGTTTCACTCGAGGCTTTGAGT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GPTILANRLIVSYRSWTSVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...GGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTGCAGACAGTGCAGCGTaGTGGGGCAGGCATCCAACA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFADSAA*WGRHPT
Trigger: TGTTGGATGCCTGCCCCATCACGCTGCACTGTCTGC...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGECRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTCAACGAGTGCTGCTTTaGTCTTCCTCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFQRVLL*SSSAEL
Trigger: AAGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTG...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGGGGTGGGACCGGCCTaGGCCAGTCATTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEGVGPA*ASHFTC
Trigger: GCAGGTAAAATGACTGGCCCAGGCCGGTCCCACCCC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp CTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LHIVLLTLLLGLGAHLIGEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...GCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: VYLNSKPLEWKDSGRNQCVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...ACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGERRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTATAAGGATCTGAGCTaGACTCCTGGGATTACAGAC +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQYKDLS*TPGITD
Trigger: GTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAATGGTGCACATTTGATTaGCTACATCCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKWCTFD*LHPAFS
Trigger: AGAGAAAGCAGGATGTAGCCAATCAAATGTGCACCA...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCGATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: CKSPHCFIQVLDLLGIPPILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...CGGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGACCAGCACTGTGATGTaGGGTACTATGGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQTSTVM*GTMVLL
Trigger: TAAAAGAACCATAGTACCTCACATCACAGTGCTGGT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCCGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGTCAACTATTCGATGTaGTTTGTGTCGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQVNYSM*FVSILT
Trigger: CGTCAGAATCGACACAAATCACATCGAATAGTTGAC...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGCCAGTCATTTTACCTaGGCCTCAGCTCTAACAGGG +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTASHFT*ASALTG
Trigger: CCCTGTTAGAGCTGAGGCGCAGGTAAAATGACTGGC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCGAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CKSPHCFIQVLDLLGIPPSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...CGGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCATTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TGGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGCTCTTCCTCCCGTGTCTTCTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: WRTSESIVRLRRSSSRVFWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...GAAGACACGGGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTGCCGGCGGAGCCACTaGTGGCAAGCACTACTGTCC +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQCRRSH*WQALLS
Trigger: GGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCATGAGTGCTCTTGCCTaGGCCAGTCTTAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTMSALA*ASLKPP
Trigger: AGGAGGCTTAAGACTGGCGCAGGCAAGAGCACTCAT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTTGTGACAGCAGACAGTaGAGCGTGATGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFCDSRQ*SVMGQA
Trigger: TGCCTGCCCCATCACGCTGCACTGTCTGCTGTCACA...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTCTCTATCATATAATTaGCCCAAAAGCCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQSLSYN*PKSPPL
Trigger: GAGAGGTGGGCTTTTGGGGCAATTATATGATAGAGA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGGGGTGGGACCGGCCTaGGCCAGTCATTTTACCTGC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPGVGPA*ASHFTC
Trigger: GCAGGTAAAATGACTGGCCCAGGCCGGTCCCACCCC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGGCAGGAGTCCACGTTaGGAGGAGGAAAGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFGRSPR*EEERRR
Trigger: CCTGCGCCTTTCCTCCTCCCAACGTGGACTCCTGCC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp GGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: GPTILANRLIVSYRSWTSTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...GGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDEGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp TTGTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: LSCSTGPTILANRLIVSYGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...GTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCGGCGGAGCCACTGCTaGCAAGCACTACTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFRRSHC*QALLSW
Trigger: CCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: FLQIASLFHTGPGPPWDTSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...GGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTCCACCCCCTGTGTGTaGAATTGTCTCCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTSTPCV*NCLPLP
Trigger: TGGAAGTGGGAGACAATTCCACACACAGGGGGTGGA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CAA 72 bp GTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTaGATTGGCTACATCCTGCTTTCTCTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VLLTLLLGLGAH*IGYILLSLPEV
Trigger: AACCTCAGGAAGAGAAAGCAGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCACTCAAAGCCTCGAGTaGAACACTGCAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTTQSLE*NTASRG
Trigger: TCCTCTGCTTGCAGTGTTTCACTCGAGGCTTTGAGT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: VYLNSKPLEWKDSGRNQCVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...ACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RLPEFEAIGMEGLRPESMTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...CATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTGGAGCACAGTGGCGTaGTCTCAGCTCGCTGCAACC +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLWSTVA*SQLAAT
Trigger: GGTTGCAGCGAGCTGAGATCACGCCACTGTGCTCCA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTAGGGCAAAAACAGGGTaGGTTCAGGACACATGTGAC +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPRAKTG*VQDTCD
Trigger: GTCACATGTGTCCTGAACTCACCCTGTTTTTGCCCT...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp CACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: HWPHNSCKSPHCFIQVLDPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...GTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: LANRLIVSYRSWTSLGYRVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp TGGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGCTCTTCCTCCCGTGTCTTCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: WRTSESIVRLRRSSSRVFVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GAAGACACGGGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LANRLIVSYRSWTSLGYRSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQCSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGTGACAGCAGACAGTaGAGCGTGATGGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGECDSRQ*SVMGQA
Trigger: TGCCTGCCCCATCACGCTGCACTGTCTGCTGTCACA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCAACGAGTGCTGCTTTaGTCTTCCTCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTQRVLL*SSSAEL
Trigger: AAGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTG...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: FLQIASLFHTGPGPPWDTLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...GGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCTGGTCAGGGGCATCTaGCACAGTGGCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESLVRGI*HSGHSW
Trigger: CCAAGAATGGCCACTGTGCCAGATGCCCCTGACCAG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGTGGGATTACAGACTGTaGTTTAGTTCCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQWDYRL*FSSIST
Trigger: GGTAGAAATGGAACTAAACCACAGTCTGTAATCCCA...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPTKFYM*WGYLPS
Trigger: TGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCACTCTATCAGTGTAGTTaGTTTATGGCCAACCCTGTC +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPLYQCS*FMANPV
Trigger: GACAGGGTTGGCCATAAACCAACTACACTGATAGAG...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGACTCAAAGCCTCGAGTaGAACACTGCAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EMLHIVLLTLLLGLGAHLTQSLE*NTASRG
Trigger: TCCTCTGCTTGCAGTGTTTCACTCGAGGCTTTGAGT...CAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CGTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: RLPEFEAIGMEGLRPESMILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...CATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTGCCAGGGAGGCCAGTaGGGTTCAAGGGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCCQGGQ*GSRVVH
Trigger: GTGCACCACCCTTGAACCTCACTGGCCTCCCTGGCA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTGGAGCACAGTGGCGTaGTCTCAGCTCGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQWSTVA*SQLAAT
Trigger: AGTTGCAGCGAGCTGAGATCACGCCACTGTGCTCCA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617828.4
ENST00000620628.4
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTGGAGCACAGTGGCGTaGTCTCAGCTCGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLWSTVA*SQLAAT
Trigger: AGTTGCAGCGAGCTGAGATCACGCCACTGTGCTCCA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617828.4
ENST00000620628.4
CDS-3UTR GCA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGAATCAATGTCAGCTTaGCGGCGGAGCCACTGCTGG +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFESMSA*RRSHCW
Trigger: CCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAATGAGTGCTCTTGCCTaGGCCAGTCTTAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIMSALA*ASLKPP
Trigger: AGGAGGCTTAAGACTGGCGCAGGCAAGAGCACTCAT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAGTGAGCTGAGATCTTaGCATCACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGSELRS*HHTPAW
Trigger: CCAGGCTGGAGTGTGATGGCAAGATCTCAGCTCACT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACTGGTCAGGGGCATCTaGCACAGTGGCCATTCTTGG +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPLVRGI*HSGHSW
Trigger: CCAAGAATGGCCACTGTGCCAGATGCCCCTGACCAG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATCAAATGGGCAACGCTaGTCAGGGGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGESNGQR*SGASGT
Trigger: TGTGCCAGATGCCCCTGACCAGCGTTGCCCATTTGA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGCTAGGAAATTCAAATaGGCAACGCTGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGARKFK*ATLVRG
Trigger: GCCCCTGACCAGCGTTGCCCATTTGAATTTCCTAGC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACAGGCTCCCGAGTTGTaGAGCCAACGTTCAAATCCT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIQAPEL*SQRSNP
Trigger: AGGATTTGAACGTTGGCTCCACAACTCGGGAGCCTG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAATGCTTCATATAGTGCTTGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: QQGRCKQRVIDEMLHIVLEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...AAGCACTATATGAAGCATTTCATCAATAACCCTCTGTTTGCATCTACCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAATGCTTCATATAGTGCTTGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: QQGRCKQRVIDEMLHIVLGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...AAGCACTATATGAAGCATTTCATCAATAACCCTCTGTTTGCATCTACCCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTTCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAGGGGCTTGGTATCCTaGGAAACCCAGGGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGRGLVS*ETQGKN
Trigger: GTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CAA 72 bp CCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATaGTCCTTACACCCACTGCTGCCTCCACATCATTCT +
Preference number: 4 (lower is better)
Translates to: PLCSSQINLLAP*SLHPLLPPHHS
Trigger: AGAATGATGTGGAGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTACTCAAAGCCTCGAGTaGAACACTGCAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFTQSLE*NTASRG
Trigger: TCCTCTGCTTGCAGTGTTTCACTCGAGGCTTTGAGT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGERAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDEGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCCCTCCCGTGTCTTCTTaGGGTGATCGTAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLPPVSS*GDRRFW
Trigger: CCAGAACCTACGATCACCTCAAGAAGACACGGGAGG...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCAATCCAAGCAAAGCTaGGGTTTGTTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPQSKQS*GLLHHL
Trigger: GAGATGATGCAACAAACCTCAGCTTTGCTTGGATTG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAATTGGCAACGAGTGCTaGTTTGGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIIGNEC*FGLPQQ
Trigger: CTGCTGAGGAAGACCAAAGCAGCACTCGTTGCCAAT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGATTGGCAACGAGTGCTaGTTTGGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLIGNEC*FGLPQQ
Trigger: CTGCTGAGGAAGACCAAAGCAGCACTCGTTGCCAAT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAATTGGCAACGAGTGCTaGTTTGGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGIGNEC*FGLPQQ
Trigger: CTGCTGAGGAAGACCAAAGCAGCACTCGTTGCCAAT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAACTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDELIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp GCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASSACFRFSRVDANRGLLSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...CAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp GAAATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGTTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: EMLHIVLLTLLLGLGAHLFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...CAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCATGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPCSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACGTGATCTCAGCTCGCTaGAACCTCTGCCTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNVISAR*NLCLLC
Trigger: ACACAGGAGGCAGAGGTTGCAGCGAGCTGAGATCAC...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGTCCTTACACCCACTaGTGCCTCCACATCATTCTC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLCPYTH*CLHIIL
Trigger: GAGAATGATGTGGAGGCAGCAGTGGGTGTAAGGACA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGAATGCTACGTATCTTTaGAAAGTTCGGTATACCAAA +
Preference number: 4 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQNATYL*KVRYTK
Trigger: TTTGGTATACCGAACTTTGCAAAGATACGTAGCATT...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACAACGAGTGCTGCTTTaGTCTTCCTCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIQRVLL*SSSAEL
Trigger: AAGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLIGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CCGTGTCTTCTTGAGGTGATCGTAGGTTCTGGCACTACAAAAATTGGTAATGCCACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: PCLLEVIVGSGTTKIGNATPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...GGCATTACCAATTTTTGTAGTGCCAGAACCTACGATCACCTCAAGAAGACACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCATCACACTCCAGCCTaGAGGACAAGAGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLHHTPA*RTRANS
Trigger: AGAGTTTGCTCTTGTCCTCCAGGCTGGAGTGTGATG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAAGGGGCTTGGTATCCTaGGAAACCCAGGGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGERGLVS*ETQGKN
Trigger: GTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCAAGTTTTACATGTGGTaGGGCTACTTACCCTCATAT +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSKFYMW*GYLPSY
Trigger: ATATGAGGGTAAGTAGCCCCACCACATGTAAAACTT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCAGTGTAGTTGGTTTATaGCCAACCCTGTCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTSVVGL*PTLSRS
Trigger: GCTTCTAGACAGGGTTGGCCATAAACCAACTACACT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CAA 72 bp TTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCAAATTCCAATGCATGG +
Preference number: 4 (lower is better)
Translates to: LVMPAVLYSWSL*ISLRSSNSNAW
Trigger: CCATGCATTGGAATTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNRAISS*AVQLGS
Trigger: TGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMATHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCATTGGCAACGAGTGCTaGTTTGGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSIGNEC*FGLPQQ
Trigger: CTGCTGAGGAAGACCAAAGCAGCACTCGTTGCCAAT...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGCCAGTCATTTTACCTaGGCCTCAGCTCTAACAGGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQASHFT*ASALTG
Trigger: CCCTGTTAGAGCTGAGGCGCAGGTAAAATGACTGGC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR GCA 90 bp GGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGATCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: GTTKIGNACCPVFLEPLDPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...ATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: LHIVLLTLLLGLGAHLIGVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTTTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTTTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLIFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTATGAGTGCTCTTGCCTaGGCCAGTCTTAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFMSALA*ASLKPP
Trigger: AGGAGGCTTAAGACTGGCGCAGGCAAGAGCACTCAT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACATGAGTGCTCTTGCCTaGGCCAGTCTTAAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNMSALA*ASLKPP
Trigger: AGGAGGCTTAAGACTGGCGCAGGCAAGAGCACTCAT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGATCTATCTTGATGAGTaGTCTTGCCTGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLIYLDE*SCLRQS
Trigger: AGACTGGCGCAGGCAAGAGCACTCATCAAGATAGAT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAATCTATCTTGATGAGTaGTCTTGCCTGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGIYLDE*SCLRQS
Trigger: AGACTGGCGCAGGCAAGAGCACTCATCAAGATAGAT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAGTGAGCTGAGATCTTaGCATCACACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQSELRS*HHTPAW
Trigger: CCAGGCTGGAGTGTGATGGCAAGATCTCAGCTCACT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCGCTCGCTGCAACCTCTaGCTCCTGTGTTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLARCNL*LLCSSN
Trigger: ATTGCTTGAACACAGGAGGCAGAGGTTGCAGCGAGC...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACAACGAGTGCTGCTTTaGTCTTCCTCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEQRVLL*SSSAEL
Trigger: AAGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFAASAR*LIRGII
Trigger: AATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLILEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATCAAATGGGCAACGCTaGTCAGGGGCATCTGGCACA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSSNGQR*SGASGT
Trigger: TGTGCCAGATGCCCCTGACCAGCGTTGCCCATTTGA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGCTAGGAAATTCAAATaGGCAACGCTGGTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFARKFK*ATLVRG
Trigger: GCCCCTGACCAGCGTTGCCCATTTGAATTTCCTAGC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGAAATCTGCTCGAGCTaGCATGTACCCGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSEICSS*HVPGHV
Trigger: GACATGGCCGGGTACATGCCAGCTCGAGCAGATTTC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPLSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp CTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTGGTGCACATTTGATTaGCTACATCCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LHIVLLTLLLGLGAHLIGWCTFD*LHPAFS
Trigger: AGAGAAAGCAGGATGTAGCCAATCAAATGTGCACCA...GCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp GCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: ASSACFRFSRVDANRGLLRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...CAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: FQCMAFNEFVMFHWPHNSTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...AGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATTTCTACCAGCACTGTaGTGTGAGGTACTATGGTTC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGFLPAL*CEVLWF
Trigger: GAACCATAGTACCTCACATCACAGTGCTGGTAGAAA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAAGTTCAGGACACATGTaGCAGCAGACAGTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSSSGHM*QQTVQR
Trigger: ACGCTGCACTGTCTGCTGTCACATGTGTCCTGAACT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCAGGGCAAAAACAGGGTaGGTTCAGGACACATGTGAC +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLRAKTG*VQDTCD
Trigger: GTCACATGTGTCCTGAACTCACCCTGTTTTTGCCCT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGTCTTGGTGCACATTTaGTTGGCTACATCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLIVLVHI*LATSCF
Trigger: AAAGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCATTGGCAACGAGTGCTaGTTTGGTCTTCCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLIGNEC*FGLPQQ
Trigger: CTGCTGAGGAAGACCAAAGCAGCACTCGTTGCCAAT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp CAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAATGCTTCATATAGTGCTTCTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QQGRCKQRVIDEMLHIVLLIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...AAGCACTATATGAAGCATTTCATCAATAACCCTCTGTTTGCATCTACCCTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESLIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAATGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDECVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp TTGTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LSCSTGPTILANRLIVSYCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...GTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATATGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAACGAGAGCTTTCTTATaGTCTAAAACCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPTRAFL*SKTFLF
Trigger: AAAGAGAAAGGTTTTAGAGCATAAGAAAGCTCTCGT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTGTCCTTACACCCACTaGTGCCTCCACATCATTCTC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFCPYTH*CLHIIL
Trigger: GAGAATGATGTGGAGGCAGCAGTGGGTGTAAGGACA...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCAACGAGTGCTGCTTTaGTCTTCCTCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFQRVLL*SSSAEL
Trigger: AAGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGGTCCATTCCCTAATTaGCAACGAGTGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQGPFPN*QRVLLW
Trigger: CCAAAGCAGCACTCGTTGCCAATTAGGGAATGGACC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGELEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSNAWLSMNLSCSTGPTILEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...AATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPITPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLITPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: FQCMAFNEFVMFHWPHNSSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...AGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTCTACCTGAATTCGAAGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: VYLNSKPLEWKDSGRNQCVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...ACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAGGTAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTGGTCCTGGACCTCCTTaGGATACCGCCGTTCCATTA +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCGPGPP*DTAVPL
Trigger: TAATGGAACGGCGGTATCCCAAGGAGGTCCAGGACC...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTCGAAGCCATTGGAATaGAAGGACTCAGGCCGGAAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLSKPLE*KDSGRN
Trigger: ATTCCGGCCTGAGTCCTTCCATTCCAATGGCTTCGA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTATAAGGATCTGAGCTaGACTCCTGGGATTACAGAC +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLYKDLS*TPGITD
Trigger: GTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATATAAGGATCTGAGCTaGACTCCTGGGATTACAGAC +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGYKDLS*TPGITD
Trigger: GTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCATCACACTCCAGCCTaGAGGACAAGAGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFHHTPA*RTRANS
Trigger: AGAGTTTGCTCTTGTCCTCCAGGCTGGAGTGTGATG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAACCAAGTTTTACATGTaGTGGGGCTACTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPITKFYM*WGYLPS
Trigger: TGAGGGTAAGTAGCCCCACCACATGTAAAACTTGGT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATCCACCCCCTGTGTGTaGAATTGTCTCCCACTTCCA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSSTPCV*NCLPLP
Trigger: TGGAAGTGGGAGACAATTCCACACACAGGGGGTGGA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCTCTATCAGTGTAGTTaGTTTATGGCCAACCCTGTC +
Preference number: 4 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFLYQCS*FMANPV
Trigger: GACAGGGTTGGCCATAAACCAACTACACTGATAGAG...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAACTCAAAGCCTCGAGTaGAACACTGCAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSTQSLE*NTASRG
Trigger: TCCTCTGCTTGCAGTGTTTCACTCGAGGCTTTGAGT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGGGTCATCTGTAGAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQGSSVE*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTCTACAGATGACCC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGECQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CCGTGTCTTCTTGAGGTGATCGTAGGTTCTGGCACTACAAAAATTGGTAATGCCCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: PCLLEVIVGSGTTKIGNARRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...GGCATTACCAATTTTTGTAGTGCCAGAACCTACGATCACCTCAAGAAGACACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp AATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: NSNAWLSMNLSCSTGPTIILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...AATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAACCAGCACTGTGATGTaGGGTACTATGGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPITSTVM*GTMVLL
Trigger: TAAAAGAACCATAGTACCTCACATCACAGTGCTGGT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTTTCTACCAGCACTGTaGTGTGAGGTACTATGGTTC +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESFLPAL*CEVLWF
Trigger: GAACCATAGTACCTCACATCACAGTGCTGGTAGAAA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCGCAATATAAGGATCTaGGCTGGACTCCTGGGATTA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQRNIRI*AGLLGL
Trigger: TAATCCCAGGAGTCCAGCTCAGATCCTTATATTGCG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGTCAACTATTCGATGTaGTTTGTGTCGATTCTGACG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLVNYSM*FVSILT
Trigger: CGTCAGAATCGACACAAATCACATCGAATAGTTGAC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp AATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGATTTCCCTTCGGAGTTCAAAAATTGTCAAATTCAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NACCPVFLEPLDFPSEFKNCQIQ*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTGAATTTGACAATT...TTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp TCTCAAGTCCCATTCTGCATAATTGTCAAATTCCTCAATGAAATCTGCTCGAGCGTCTTGGTGCACATTTaGTTGGCTACATCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: SQVPFCIIVKFLNEICSSVLVHI*LATSCF
Trigger: AAAGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...GCTCGAGCAGATTTCATTGAGGAATTTGACAATTATGCAGAATGGGACTTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPLIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACCTAATTGGCAACGAGTaGTGCTTTGGTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNLIGNE*CFGLPQ
Trigger: CTGAGGAAGACCAAAGCAGCACTCGTTGCCAATTAG...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATATGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPICVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FQCMAFNEFVMFHWPHNSCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...AGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATTCCTCAATGAAATCTaGTCGAGCTGGCATGTACCC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPFLNEI*SSWHVP
Trigger: GGGTACATGCCAGCTCGAGCAGATTTCATTGAGGAA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACATCTATCTTGATGAGTaGTCTTGCCTGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNIYLDE*SCLRQS
Trigger: AGACTGGCGCAGGCAAGAGCACTCATCAAGATAGAT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPINNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAGAATCCCTTCCCAGCTaGATGCATATTTACAACAGT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIESLPS*MHIYNS
Trigger: ACTGTTGTAAATATGCATGCAGCTGGGAAGGGATTC...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGESHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAATGCTTCATATAGTGCTTTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: QQGRCKQRVIDEMLHIVLSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...AAGCACTATATGAAGCATTTCATCAATAACCCTCTGTTTGCATCTACCCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTGTTTCATACAGGTCCTaGACCTCCTTGGGATACCGC +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCVSYRS*TSLGYR
Trigger: GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAAC...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: FQCMAFNEFVMFHWPHNSFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...AGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTGTTAAAGATGCAGTTTaGGATAAGACCATCATAAGG +
Preference number: 4 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPVKDAV*DKTIIR
Trigger: CCTTATGATGGTCTTATCCCAAACTGCATCTTTAAC...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
3UTR CAA 72 bp CGGAGTTCAAATTCCAATGCATGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCCACAATTCTTGCAAAT +
Preference number: 4 (lower is better)
Translates to: RSSNSNAWLSMN*SCSTGPTILAN
Trigger: ATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATTTGAACTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGTCTTGGTGCACATTTaGTTGGCTACATCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSVLVHI*LATSCQ
Trigger: TTGGCAGGATGTAGCCAATCAAATGTGCACCAAGAC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATGCACTCCGTCTACCTaGATTCGAAGCCATTGGAAT +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSCTPST*IRSHWN
Trigger: ATTCCAATGGCTTCGAATTCAGGTAGACGGAGTGCA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTACCCATATTGTCCTTTaGCCCACCACATTCCAAACT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFTHIVL*PTTFQT
Trigger: AGTTTGGAATGTGGTGGGTCAAAGGACAATATGGGT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATTTCTACCAGCACTGTaGTGTGAGGTACTATGGTTC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPFLPAL*CEVLWF
Trigger: GAACCATAGTACCTCACATCACAGTGCTGGTAGAAA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCAATCCAAGCAAAGCTaGGGTTTGTTGCATCATCTC +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFQSKQS*GLLHHL
Trigger: GAGATGATGCAACAAACCTCAGCTTTGCTTGGATTG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTTCTTATCCCTTAGATaGATCCCTTCCCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQFLSLR*IPSQLH
Trigger: ATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTTTCCTCATGAAATCTaGTTTGCCATCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAFPHEI*FAISFS
Trigger: TGAAAAGCTGATGGCAAATCAGATTTCATGAGGAAA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGATAATTGTCAAATTCAGTaGAATGGAATGGCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GTTKIGNACCPVFLEPLDNCQIQ*NGMAVS
Trigger: TGACACAGCCATTCCATTTCACTGAATTTGACAATT...ATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACCTCCTTGGTCTTGGTaGACATTTGATTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPPPWSW*TFDWLH
Trigger: ATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGESFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGGCCCCACAATTCTTaGAAATCGCCTCATTGTTTC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPWPHNS*KSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMASLKPP*LLHSFN
Trigger: ATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACT...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAATCTATCTTGATGAGTaGTCTTGCCTGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSIYLDE*SCLRQS
Trigger: AGACTGGCGCAGGCAAGAGCACTCATCAAGATAGAT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCACGAGAGCTTTCTTATaGTCTAAAACCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTTRAFL*SKTFLF
Trigger: AAAGAGAAAGGTTTTAGAGCATAAGAAAGCTCTCGT...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCAAAGCTGAGGTTTGTTaGATCATCTCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLKAEVC*IISILR
Trigger: CCTGAGGATGGAGATGATGCAACAAACCTCAGCTTT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAAAGCTGAGGTTTGTTaGATCATCTCCATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQKAEVC*IISILR
Trigger: CCTGAGGATGGAGATGATGCAACAAACCTCAGCTTT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGAGAGGAAGGATGCAATaGTACGTATCTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLRGRMQ*YVSLQS
Trigger: ACTTTGCAAAGATACGTAGCATTGCATCCTTCCTCT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTCTCACACTCCTCCTTaGTCTTGGTGCACATTTGAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLSHTPP*SWCTFD
Trigger: ATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESLSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGELSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp AATTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: NSNAWLSMNLSCSTGPTIQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...AATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CCA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTGTTAAAGATGCAGTTTaGGATAAGACCATCATAAGG +
Preference number: 4 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAVKDAV*DKTIIR
Trigger: CCTTATGATGGTCTTATCCCAAACTGCATCTTTAAC...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAAGTTTTACATGTGGTaGGGCTACTTACCCTCATAT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIKFYMW*GYLPSY
Trigger: ATATGAGGGTAAGTAGCCCCACCACATGTAAAACTT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATCTTCTGAGACAATCTaGAGAGACCTCTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGESSETI*RDLYQC
Trigger: ACACTGATAGAGGTCTCTCCAGATTGTCTCAGAAGA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATGTCAAATTCCTCAATaGAATCTGCTCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSCQIPQ*NLLELA
Trigger: TGCCAGCTCGAGCAGATTTCATTGAGGAATTTGACA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGATACTGGAGAACTTCTaGGAGCATAGTGCGTTTAAG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQILENF*EHSAFK
Trigger: CTTAAACGCACTATGCTCTCAGAAGTTCTCCAGTAT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTTTCCTCATGAAATCTaGTTTGCCATCAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLFPHEI*FAISFS
Trigger: TGAAAAGCTGATGGCAAATCAGATTTCATGAGGAAA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCGTTCAGCAGGGTAGATaGAAACAGAGGGTTATTGAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLVQQGR*KQRVID
Trigger: ATCAATAACCCTCTGTTTGCATCTACCCTGCTGAAC...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAGTTTTTGCTTCCTCTaGTTGTTTCAGGTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQSFCFL*LFQVQQ
Trigger: CTGCTGAACCTGAAACAAGCAGAGGAAGCAAAAACT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACTGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPISLKPP*LLHSFN
Trigger: ATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTATCTATCTTGATGAGTaGTCTTGCCTGCGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCIYLDE*SCLRQS
Trigger: AGACTGGCGCAGGCAAGAGCACTCATCAAGATAGAT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESCSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGECSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACCCCTTCCCAGCTGCATaGATATTTACAACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNPFPAA*IFTTVK
Trigger: TTTGACTGTTGTAAATATGCATGCAGCTGGGAAGGG...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCCCTTCCCAGCTGCATaGATATTTACAACAGTCAAA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQPFPAA*IFTTVK
Trigger: TTTGACTGTTGTAAATATGCATGCAGCTGGGAAGGG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACGAATCCCTTCCCAGCTaGATGCATATTTACAACAGT +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNESLPS*MHIYNS
Trigger: ACTGTTGTAAATATGCATGCAGCTGGGAAGGGATTC...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCLEQSS*DQGQEN
Trigger: ATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAG...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSTPPWS*CTFDWL
Trigger: TAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACTTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQFVMFH*PHNSCK
Trigger: TTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTGGGATTACAGACTGTaGTTTAGTTCCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESWDYRL*FSSIST
Trigger: GGTAGAAATGGAACTAAACCACAGTCTGTAATCCCA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTCTGAGCTGGACTCCTaGGATTACAGACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCSELDS*DYRLWF
Trigger: AAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATATAAGGATCTGAGCTaGACTCCTGGGATTACAGAC +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSYKDLS*TPGITD
Trigger: GTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAAGTGTAGTTGGTTTATaGCCAACCCTGTCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSSVVGL*PTLSRS
Trigger: GCTTCTAGACAGGGTTGGCCATAAACCAACTACACT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTCTTCTGAGACAATCTaGAGAGACCTCTATCAGTGT +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFSSETI*RDLYQC
Trigger: ACACTGATAGAGGTCTCTCCAGATTGTCTCAGAAGA...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR TCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGERRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTATTCTTGGAGCCTCTTaGTTTCCCTTCGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCILGAS*FPFGVQ
Trigger: TTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAAT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTACCAACCTCACCATCTaGCAGAGCTCCTTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCTNLTI*QSSFSF
Trigger: AAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATGTGTCAGCAGTTTTTaGTTCCTCTGCTTGTTTCAG +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSCVSSF*FLCLFQ
Trigger: CTGAAACAAGCAGAGGAAGCAAAAACTGCTGACACA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTGTAGCACACAACTCTaGAGCATAATACCAACAACA +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLCSTQL*SIIPTT
Trigger: TGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAACGAGAGCTTTCTTATaGTCTAAAACCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VFTMRIQLKNNSPECPPITRAFL*SKTFLF
Trigger: AAAGAGAAAGGTTTTAGAGCATAAGAAAGCTCTCGT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCAAAAGCAGCTTTTATTaGAGGCTAGCCTTTCACCAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLKSSFY*RLAFHH
Trigger: ATGGTGAAAGGCTAGCCTGCAATAAAAGCTGCTTTT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTAAAAGTTTGAGCAGATaGTTCCAACAAAGCACACAG +
Preference number: 4 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFKSLSR*FQQSTQ
Trigger: CTGTGTGCTTTGTTGGAAGCATCTGCTCAAACTTTT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAGAGGAAGGATGCAATaGTACGTATCTTTGCAAAGT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQRGRMQ*YVSLQS
Trigger: ACTTTGCAAAGATACGTAGCATTGCATCCTTCCTCT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CCA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGTCTCTCCTTTAACCTaGAATGATAGATATCTACCA +
Preference number: 4 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEVSPLT*NDRYLP
Trigger: TGGTAGATATCTATCATTCCAGGTTAAAGGAGAGAC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACTGTCCTGGATATACTaGAGAACTTCTGAGAGCATA +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSLSWIY*RTSESI
Trigger: TATGCTCTCAGAAGTTCTCCAGTATATCCAGGACAG...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACAAGCACTACTGTCCTaGATATACTGGAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSQALLS*IYWRTS
Trigger: AGAAGTTCTCCAGTATATCCAGGACAGTAGTGCTTG...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTGGGATTACAGACTGTaGTTTAGTTCCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLWDYRL*FSSIST
Trigger: GGTAGAAATGGAACTAAACCACAGTCTGTAATCCCA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGGGATTACAGACTGTaGTTTAGTTCCATTTCTACC +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPWDYRL*FSSIST
Trigger: GGTAGAAATGGAACTAAACCACAGTCTGTAATCCCA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR TCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCCGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR TCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACGCCGTTCCATTAATTaGAACTTTCTAAGGTTGATT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPRRSIN*NFLRLI
Trigger: AATCAACCTTAGAAAGTTTCAATTAATGGAACGGCG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQSLKPP*LLHSFN
Trigger: ATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPSLKPP*LLHSFN
Trigger: ATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACT...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR GCA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLSLKPP*LLHSFN
Trigger: ATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTAACAACTCTCCAGAATaGCCACCCATATTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCNNSPE*PPILSF
Trigger: AAAGGACAATATGGGTGGGCATTCTGGAGAGTTGTT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTACGAGAGCTTTCTTATaGTCTAAAACCTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESTRAFL*SKTFLF
Trigger: AAAGAGAAAGGTTTTAGAGCATAAGAAAGCTCTCGT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR GCA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAAAAAGTTTGAGCAGATaGTTCCAACAAAGCACACAG +
Preference number: 4 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSKSLSR*FQQSTQ
Trigger: CTGTGTGCTTTGTTGGAAGCATCTGCTCAAACTTTT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTCTCTATCATATAATTaGCCCAAAAGCCCACCTCTC +
Preference number: 4 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCSLSYN*PKSPPL
Trigger: GAGAGGTGGGCTTTTGGGGCAATTATATGATAGAGA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR GCA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACAATGCTACGTATCTTTaGAAAGTTCGGTATACCAAA +
Preference number: 4 (lower is better)
Translates to: FISYPLDESLPSCMHIYNNATYL*KVRYTK
Trigger: TTTGGTATACCGAACTTTGCAAAGATACGTAGCATT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS CCA 90 bp CAGGAGTCCACGTTGGGAGGAGGAAAGGCGCAGGCTCCCGAGTTGTaGAGCCAACGTTCAAATCCTTACGGGGTGGGACCGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: QESTLGGGKAQAPEL*SQRSNPYGVGPAWA
Trigger: GGCCCAGGCCGGTCCCACCCCGTAAGGATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGCCTTTCCTCCTCCCAACGTGGACTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615328.4
ENST00000621780.1
ENST00000622522.2
ENST00000632146.1
ENST00000632358.1
CDS-3UTR CAA 90 bp GGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCAAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: GLRPESMSACRRSHCWQARSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...TGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GCTTGCCGGCGGAGCCACTGCTGGCAAGCACTACTGTCCTGGATATACTGGAGAGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: ACRRSHCWQALLSWIYWRGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...TCTCCAGTATATCCAGGACAGTAGTGCTTGCCAGCAGTGGCTCCGCCGGCAAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS TCA 90 bp TTGAGCAGTCCAGACCAAAGCTTGATGACTCCCGGGAGAAGGAAGTaGGGCACTTCGCCGGGCAGGAGTCCACGTTGGGAGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LSSPDQSLMTPGRRK*GTSPGRSPRWEEER
Trigger: CCTTTCCTCCTCCCAACGTGGACTCCTGCCCGGCGAAGTGCCTCACTTCCTTCTCCCGGGAGTCATCAAGCTTTGGTCTGGACTGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615328.4
ENST00000632146.1
CDS-3UTR CAA 90 bp GGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGCAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: GLRPESMSACRRSHCWQAGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TGCTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: AIGMEGLRPESMSACRRSLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CATCATCTCCATCCTCAGGGGCTTGGTATCCTGGGAAACCCAGGGCAAAAACAGGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: HHLHPQGLGILGNPGQKQATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...CTGTTTTTGCCCTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGAGATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAAAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp TGGAGAACTTCTGAGAGCATAGTGCGTTTAAGGCGCTCTTCCTCCCGTGTCTTCAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: WRTSESIVRLRRSSSRVFRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...GAAGACACGGGAGGAAGAGCGCCTTAAACGCACTATGCTCTCAGAAGTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp AAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCCACTGCTGGCAAGTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: KDSGRNQCQLAGGATAGKLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...CTTGCCAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GGCTCCAGGGACCAACCTCACCATCTGACAGAGCTCCTTTTCTTTTTCATTCAGGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: GSRDQPHHLTELLFFFIQGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...CTGAATGAAAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGTCCCTGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp TGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCGAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: CKSPHCFIQVLDLLGIPPKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...CGGCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp AGCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: SHWNGRTQAGINVSLPAELAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...CTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GCCATTGGAATGGAAGGACTCAGGCCGGAATCAATGTCAGCTTGCCGGCGGAGCTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: AIGMEGLRPESMSACRRSYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...GCTCCGCCGGCAAGCTGACATTGATTCCGGCCTGAGTCCTTCCATTCCAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTCCATCCTCAGGGGCTaGGTATCCTGGGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSSILRG*VSWETQ
Trigger: CTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGA...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp AGGTCGGGGAGGGTCATCTGTAGAGTGAAATGGAATGGCTGTGTCAGCAGTTTTGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RSGRVICRVKWNGCVSSFATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...AAAACTGCTGACACAGCCATTCCATTTCACTCTACAGATGACCCTCCCCGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCCCCCTGTGTGTGGAATaGTCTCCCACTTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSPLCVE*SPTSIC
Trigger: GCAGATGGAAGTGGGAGACAATTCCACACACAGGGG...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCTGCTCGAGCTGGCATGTACCCGGCCATGTCCCGAGAAAGCAAGGAGTCAAAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: ICSSWHVPGHVPRKQGVKGLGAH*IGYILL
Trigger: AAGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TTTGACTCCTTGCTTTCTCGGGACATGGCCGGGTACATGCCAGCTCGAGCAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp GTCCCGAGAAAGCAAGGAGTCAAAGGTAGGTCGGGGAGGGTCATCTGTAGAGTGTTATCAGAGGGATCATaGCTAAAGGAACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: VPRKQGVKGRSGRVICRVLSEGS*LKEPKR
Trigger: CCGTTTGGGTTCCTTTAGCAATGATCCCTCTGATAA...CACTCTACAGATGACCCTCCCCGACCTACCTTTGACTCCTTGCTTTCTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614122.4
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGCACAGTGGCCATTCTaGGTAGAGCTACGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTAQWPF*VELRAP
Trigger: TGGAGCGCGTAGCTCTACCAAGAATGGCCACTGTGC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAGGGCAGGAGTCCACGTaGGGAGGAGGAAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPGQEST*GGGKAQ
Trigger: CTGCGCCTTTCCTCCTCCCAACGTGGACTCCTGCCC...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAAAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDERSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp CTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTCCTTGGGATACCGCCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: LANRLIVSYRSWTSLGYRLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...GCGGTATCCCAAGGAGGTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTCCATCCTCAGGGGCTaGGTATCCTGGGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMASILRG*VSWETQ
Trigger: CTGGGTTTCCCAGGATACCAAGCCCCTGAGGATGGA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS TCA 90 bp CCAAAGCCACAGTCCATCACAGCTTCTAAAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCAAGGACAGGAAAATCTGAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: PKPQSITASKRAISS*AVQLGSRTGKSEVC
Trigger: GCAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAGCTGTGATGGACTGTGGCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620838.4
ENST00000633475.1
CDS-3UTR CAA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCACATACACCAAAGCTaGATGACTCCCTCGCCGAGA +
Preference number: 5 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPHIHQS*MTPSPR
Trigger: TCTCGGCGAGGGAGTCATCAAGCTTTGGTGTATGTG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: VMFHWPHNSCKSPHCFIQKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...CTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGGGCAGGAGTCCACGTaGGGAGGAGGAAAGGCGCAG +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSGQEST*GGGKAQ
Trigger: CTGCGCCTTTCCTCCTCCCAACGTGGACTCCTGCCC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp GGCTCCAGGGACCAACCTCACCATCTGACAGAGCTCCTTTTCTTTTTCATTCAGTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: GSRDQPHHLTELLFFFIQWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...CTGAATGAAAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGTCCCTGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GGCTCCAGGGACCAACCTCACCATCTGACAGAGCTCCTTTTCTTTTTCATTCAGCTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: GSRDQPHHLTELLFFFIQLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...CTGAATGAAAAAGAAAAGGAGCTCTGTCAGATGGTGAGGTTGGTCCCTGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCACTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCACACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCCTACCCAGCTGCCCCTaGTGTTCTAGCCAAATAAAT +
Preference number: 5 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSLPSCP*CSSQIN
Trigger: ATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS TCA 90 bp CCAAAGCCACAGTCCATCACAGCTTCTAAAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCAAGGACAGGAAAATCTGAAGTCTGT +
Preference number: 5 (lower is better)
Translates to: PKPQSITASKRAISS*AVQLGSRTGKSEVC
Trigger: ACAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAGCTGTGATGGACTGTGGCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620086.4
ENST00000633431.1
CDS CCA 90 bp CCATCACAGCTTCTAAAAGGGCCATTTCTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAATCTGAAGTCTGTAGTCCCAGCTACT +
Preference number: 5 (lower is better)
Translates to: PSQLLKGPFLLEQSS*DQGQENLKSVVPAT
Trigger: AGTAGCTGGGACTACAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAGCTGTGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620086.4
ENST00000633431.1
CDS-3UTR CAA 90 bp CTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGATGAACACATACACCAAAGCTaGATGACTCCCTCGCCGAGA +
Preference number: 5 (lower is better)
Translates to: LCLFQVQQGRCKQRVIDEHIHQS*MTPSPR
Trigger: TCTCGGCGAGGGAGTCATCAAGCTTTGGTGTATGTG...TTCATCAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTGCACAGTGGCCATTCTaGGTAGAGCTACGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESAQWPF*VELRAP
Trigger: TGGAGCGCGTAGCTCTACCAAGAATGGCCACTGTGC...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGCGCAGGCTCCCGAGTaGTGGAGCCAACGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEAQAPE*WSQRSN
Trigger: ATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGATTTCCCTTCGGAGTTCAAAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: NACCPVFLEPLDFPSEFKGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TTTGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CACTGGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTCCTGGACCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: HWPHNSCKSPHCFIQVLDLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...GTCCAGGACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGGAATCAATGTCAGCTaGCCGGCGGAGCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQGINVS*PAEPLL
Trigger: CAGCAGTGGCTCCGCCGGCAAGCTGACATTGATTCC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCTTACACCCACTGCTGCCTCTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: CSSQINLLAPLSLHPLLPLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...AGGCAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCTAGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACCCCTGTGTGTGGAATaGTCTCCCACTTCCATCTGC +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGPLCVE*SPTSIC
Trigger: GCAGATGGAAGTGGGAGACAATTCCACACACAGGGG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GCTTCCTCTGCTTGTTTCAGGTTCAGCAGGGTAGATGCAAACAGAGGGTTATTGTTATCAGAGGGATCATaGCTAAAGGGACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: ASSACFRFSRVDANRGLLLSEGS*LKGPKR
Trigger: CCGTTTGGGTCCCTTTAGCAATGATCCCTCTGATAA...CAATAACCCTCTGTTTGCATCTACCCTGCTGAACCTGAAACAAGCAGAGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000631413.1
CDS-3UTR CAA 90 bp AGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCTACATCCTGGTCTTGGTGCACATTaGATTGGCTACATCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SASHTPPWSWCTFDWLHPGLGAH*IGYILL
Trigger: AAGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...AGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS TCA 90 bp CCAAAGCCACAGTCCATCACAGCTTCTAAAAGGGCCATTTCTTCTTaGGCAGTCCAGCTGGGATCAAGGACAGGAAAATCTGAAGTCATT +
Preference number: 5 (lower is better)
Translates to: PKPQSITASKRAISS*AVQLGSRTGKSEVI
Trigger: AATGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAGCTGTGATGGACTGTGGCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610834.4
ENST00000612272.4
ENST00000614122.4
ENST00000615182.5
ENST00000617828.4
ENST00000620367.4
ENST00000620628.4
ENST00000621780.1
ENST00000622522.2
ENST00000631413.1
ENST00000631626.1
ENST00000632358.1
ENST00000633468.1
ENST00000633584.1
CDS CCA 90 bp CCATCACAGCTTCTAAAAGGGCCATTTCTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAATCTGAAGTCTGCAAGCAGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: PSQLLKGPFLLEQSS*DQGQENLKSASRGK
Trigger: TTTTCCTCTGCTTGCAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAGCTGTGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620838.4
ENST00000633475.1
CDS-3UTR CAA 90 bp ATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTCACATACACCAAAGCTaGATGACTCCCTCGCCGAGA +
Preference number: 5 (lower is better)
Translates to: MLHIVLLTLLLGLGAHLIHIHQS*MTPSPR
Trigger: TCTCGGCGAGGGAGTCATCAAGCTTTGGTGTATGTG...AATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGCAACGAGTGCTGCTTaGGTCTTCCTCAGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEATSAA*VFLSRA
Trigger: AGCTCTGCTGAGGAAGACCAAAGCAGCACTCGTTGC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGCGCAGGCTCCCGAGTaGTGGAGCCAACGTTCAAAT +
Preference number: 5 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFAQAPE*WSQRSN
Trigger: ATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCAAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LALQKLVMPAVLYSWSLLWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...CAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGATCTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: GTTKIGNACCPVFLEPLDLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...ATCAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CTACCCAGCTGCCCCTTGTGTTCTAGCCAAATAAATCTCTTGGCACCATTGTCCATCTGTCTGCAGTGTTaGAAGGCAAGACAGATAATC +
Preference number: 5 (lower is better)
Translates to: LPSCPLCSSQINLLAPLSICLQC*KARQII
Trigger: GATTATCTGTCTTGCCTTCAAACACTGCAGACAGAT...GGACAATGGTGCCAAGAGATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCACATACACCAAAGCTaGATGACTCCCTCGCCGAGA +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESHIHQS*MTPSPR
Trigger: TCTCGGCGAGGGAGTCATCAAGCTTTGGTGTATGTG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACACATACACCAAAGCTaGATGACTCCCGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEHIHQS*MTPGRR
Trigger: CCTTCTCCCGGGAGTCATCAAGCTTTGGTGTATGTG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGATTGGCCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LHIVLLTLLLGLGAHLIGLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...GCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp CTGGCACTACAAAAATTGGTAATGCCTGCTGTCCTGTATTCTTGGAGCCTCTTGCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LALQKLVMPAVLYSWSLLLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...CAAGAGGCTCCAAGAATACAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAAGGTCCTGGACCTCCTaGGGATACCGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSRSWTS*GYRRSI
Trigger: AATGGAACGGCGGTATCCCAAGGAGGTCCAGGACCT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CCGTGTCTTCTTGAGGTGATCGTAGGTTCTGGCACTACAAAAATTGGTAATGCCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: PCLLEVIVGSGTTKIGNALQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...GGCATTACCAATTTTTGTAGTGCCAGAACCTACGATCACCTCAAGAAGACACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPIECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTCCAAGGTTTCTGTCAGACTGTCCTACCATCCTCCCACTCCTAACTACCCAATTCTGCAGAAACGTTaGAGGACCAAGTTTTACATG +
Preference number: 5 (lower is better)
Translates to: VSKVSVRLSYHPPTPNYPILQKR*RTKFYM
Trigger: CATGTAAAACTTGGTCCTCAAACGTTTCTGCAGAAT...TGGGTAGTTAGGAGTGGGAGGATGGTAGGACAGTCTGACAGAAACCTTGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTAATCTCTTGGCACCATaGTCCTTACACCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFNLLAP*SLHPLL
Trigger: CAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAATCTCTTGGCACCATaGTCCTTACACCCACTGCTG +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGNLLAP*SLHPLL
Trigger: CAGCAGTGGGTGTAAGGACAATGGTGCCAAGAGATT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTCTACCCAGCTGCCCCTaGTGTTCTAGCCAAATAAAT +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMALPSCP*CSSQIN
Trigger: ATTTATTTGGCTAGAACACAAGGGGCAGCTGGGTAG...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACACATACACCAAAGCTaGATGACTCCCGGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPHIHQS*MTPGRR
Trigger: CCTTCTCCCGGGAGTCATCAAGCTTTGGTGTATGTG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612272.4
ENST00000622522.2
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAATGCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTTGCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: EMLHIVLLTLLLGLGAHLLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...CAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614122.4
ENST00000631413.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMALQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGACTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTTTGTTCACATCTATCTaGATGAGTGCTCTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMALFTSI*MSALAC
Trigger: GCAGGCAAGAGCACTCATCAAGATAGATGTGAACAA...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATCAAGGTTAAGGACTCTTCAGACTACAACAGACGTCACCTAACACTGATGGCTGCTAGCCTTTCACCATaGAGAAATAGGGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: IKVKDSSDYNRRHLTLMAASLSP*RNRVQV
Trigger: GACTTGAACCCTATTTCTCAATGGTGAAAGGCTAGC...AGCCATCAGTGTTAGGTGACGTCTGTTGTAGTCTGAAGAGTCCTTAACCTTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATTATCAGAGGGATCATaGCTAAAGGGACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGLSEGS*LKGPKR
Trigger: CCGTTTGGGTCCCTTTAGCAATGATCCCTCTGATAA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000617828.4
ENST00000622522.2
ENST00000633468.1
CDS TCA 90 bp TACAGAGGTCCAAAGAAGTCACTCCCACAAATTTCTGCAGGTCAGTaGATCACTAACCCAATTTTAGACTCTCAGGCATCACGGGTTTTT +
Preference number: 5 (lower is better)
Translates to: YRGPKKSLPQISAGQ*ITNPILDSQASRVF
Trigger: AAAAACCCGTGATGCCTGAGAGTCTAAAATTGGGTTAGTGATTCACTGACCTGCAGAAATTTGTGGGAGTGACTTCTTTGGACCTCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000616284.1
ENST00000632750.1
CDS CCA 90 bp AAACCACCTACATGCATGGCTTTCAATGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAATCGCCTCATTGTTTCATACAGGTC +
Preference number: 5 (lower is better)
Translates to: KPPTCMAFNEFVMFH*PHNSCKSPHCFIQV
Trigger: GACCTGTATGAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGTAGGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATATTATCAGAGGGATCATaGCTAAAGGAACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILSEGS*LKEPKR
Trigger: CCGTTTGGGTTCCTTTAGCAATGATCCCTCTGATAA...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000620628.4
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTTATCAGAGGGATCATaGCTAAAGGAACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLLSEGS*LKEPKR
Trigger: CCGTTTGGGTTCCTTTAGCAATGATCCCTCTGATAA...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000620628.4
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TTCCAATGCATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: FQCMAFNEFVMFHWPHNSYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...AGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619777.4
ENST00000632804.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATATTGTTCACATCTATCTaGATGAGTGCTCTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILFTSI*MSALAC
Trigger: GCAGGCAAGAGCACTCATCAAGATAGATGTGAACAA...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTGAATGCCCACCCATATaGTCCTTTGACCCACCACAT +
Preference number: 5 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFECPPI*SFDPPH
Trigger: ATGTGGTGGGTCAAAGGACAATATGGGTGGGCATTC...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CCCTGTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCAATGCTACGTATCTTaGCAAAGTTCGGTATACCAA +
Preference number: 5 (lower is better)
Translates to: PCFHHENSAEKQLSRMPTQCYVS*QSSVYQ
Trigger: TTGGTATACCGAACTTTGCAAAGATACGTAGCATTG...GGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS CCA 90 bp TACACACACAAATACTGCTCAAGGCTCAAAAACCACCTACATGCATaGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAATTCTT +
Preference number: 5 (lower is better)
Translates to: YTHKYCSRLKNHLHA*LSMNLSCSTGPTIL
Trigger: AAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGTAGGTGGTTTTTGAGCCTTGAGCAGTATTTGTGTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTCACATACACCAAAGCTaGATGACTCCCTCGCCGAGA +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCHIHQS*MTPSPR
Trigger: TCTCGGCGAGGGAGTCATCAAGCTTTGGTGTATGTG...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTAAGGGCCATTTCTTCTaGAGCAGTCCAGCTGGGATC +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCKGHFF*SSPAGI
Trigger: GATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGGTCTTGGTGCACATTaGATTGGCTACATCCTGCCA +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSGLGAH*IGYILP
Trigger: TGGCAGGATGTAGCCAATCAAATGTGCACCAAGACC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGELQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCCTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACTGAATTCGAAGCCATaGGAATGGAAGGACTCAGGC +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSLNSKP*EWKDSG
Trigger: GCCTGAGTCCTTCCATTCCAATGGCTTCGAATTCAG...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCACACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTATCGAAGTCCTCTATTaGAATTCCCTCAGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFIEVLY*NSLRSL
Trigger: TAAGGACCTGAGGGAATTCAAATAGAGGACTTCGAT...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAGCCAAATAAATCTCTaGGCACCATTGTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGSQINL*APLSLH
Trigger: GTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATTATCAGAGGGATCATaGCTAAAGGGACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPLSEGS*LKGPKR
Trigger: CCGTTTGGGTCCCTTTAGCAATGATCCCTCTGATAA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000617828.4
ENST00000622522.2
ENST00000633468.1
CDS GCA 90 bp AATATACACACACAAATACTGCTCAAGGCTCAAAAACCACCTACATaGATGGCTTTCAATGAATTTGTCATGTTCCACTGGCCCCACAAT +
Preference number: 5 (lower is better)
Translates to: NIHTQILLKAQKPPT*MAFNEFVMFHWPHN
Trigger: ATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGTAGGTGGTTTTTGAGCCTTGAGCAGTATTTGTGTGTGTATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp AATAGCTTATGTAGCACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTCTGTGTCAGCAGTTTTaGCTTCCTCTGCTTGTTTCA +
Preference number: 5 (lower is better)
Translates to: NSLCSTQLCSIIPTTGVFLCQQF*LPLLVS
Trigger: TGAAACAAGCAGAGGAAGCAAAAACTGCTGACACAG...AAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTGCTACATAAGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCTTGCAAATCGCCTCATaGTTTCATACAGGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLLQIAS*FHTGPG
Trigger: TCCAGGACCTGTATGAAACAATGAGGCGATTTGCAA...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACTGGCCCCACAATTCTaGCAAATCGCCTCATTGTTT +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSLAPQF*QIASLF
Trigger: AAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAG...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATACTTAAGCCTCCTTGCTaGTTACATTCGTTCAATAGA +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPILKPPC*LHSFNR
Trigger: TCTATTGAACGAATGTAACAAGCAAGGAGGCTTAAG...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp TATAAGGATCTGAGCTGGACTCCTGGGATTACAGACTGTGGTTTAGTTCCATTTCTTAAGCCTCCTTGCTaGTTACATTCGTTCAATAGA +
Preference number: 5 (lower is better)
Translates to: YKDLSWTPGITDCGLVPFLKPPC*LHSFNR
Trigger: TCTATTGAACGAATGTAACAAGCAAGGAGGCTTAAG...AAATGGAACTAAACCACAGTCTGTAATCCCAGGAGTCCAGCTCAGATCCTTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp ATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGTTGTTCACATCTATCTaGATGAGTGCTCTTGCCTGC +
Preference number: 5 (lower is better)
Translates to: IQLKVSFVLSPVFTMRIQLFTSI*MSALAC
Trigger: GCAGGCAAGAGCACTCATCAAGATAGATGTGAACAA...CTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATGAGAATTCAGCTGAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: QLKVSFVLSPVFTMRIQLNLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...CAGCTGAATTCTCATGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp CACACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: HTTLQHNTNNRSVLKQDGNLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...TCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTTTCACCATGAGAATTCAGCTGAAAAACAACTCTCCAGAATGCCCACCCATAAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: VFTMRIQLKNNSPECPPINLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...TATGGGTGGGCATTCTGGAGAGTTGTTTTTCAGCTGAATTCTCATGGTGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAATCTGTCTGCAGTGTTaGAAGGCAAGACAGATAATC +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEICLQC*KARQII
Trigger: GATTATCTGTCTTGCCTTCAAACACTGCAGACAGAT...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATTATCAGAGGGATCATaGCTAAAGGAACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSLSEGS*LKEPKR
Trigger: CCGTTTGGGTTCCTTTAGCAATGATCCCTCTGATAA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000620628.4
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCC +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCWLSMN*SCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCATATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTCTGGCACTACAAAAATaGGTAATGCCTGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCLALQK*VMPAVL
Trigger: CAGGACAGCAGGCATTACCAATTTTTGTAGTGCCAG...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACTTAAGCCTCCTTGCTaGTTACATTCGTTCAATAGA +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGELKPPC*LHSFNR
Trigger: TCTATTGAACGAATGTAACAAGCAAGGAGGCTTAAG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTCACCCATATTGTCCTTaGACCCACCACATTCCAAAC +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCHPYCP*THHIPN
Trigger: GTTTGGAATGTGGTGGGTCAAAGGACAATATGGGTG...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp CTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAAGAAAGTAACTTAAGGTTTCCTTaGTCCTTTCCCCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LQHNTNNRSVLKQDGEESNLRFP*SFPLFS
Trigger: TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTT...ACTTTCTTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000622522.2
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAGCTAGCCTTTCACCATaGAGAAATAGGGTTCAAGTC +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSASLSP*RNRVQV
Trigger: GACTTGAACCCTATTTCTCAATGGTGAAAGGCTAGC...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp TTAAATCTGTCTGCAGTGTTTGAAGGCAAGACAGATAATCAGCAAACTTACCTCATCGAAGTCCTCTATTaGAATTCCCTCAGGTCCTTA +
Preference number: 5 (lower is better)
Translates to: LNLSAVFEGKTDNQQTYLIEVLY*NSLRSL
Trigger: TAAGGACCTGAGGGAATTCAAATAGAGGACTTCGAT...GAGGTAAGTTTGCTGATTATCTGTCTTGCCTTCAAACACTGCAGACAGATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp TTCATTTCTTATCCCTTAGATGAATCCCTTCCCAGCTGCATGCATATTTACAACAGCCAAATAAATCTCTaGGCACCATTGTCCTTACAC +
Preference number: 5 (lower is better)
Translates to: FISYPLDESLPSCMHIYNSQINL*APLSLH
Trigger: GTGTAAGGACAATGGTGCCAAGAGATTTATTTGGCT...GTTGTAAATATGCATGCAGCTGGGAAGGGATTCATCTAAGGGATAAGAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp ACAACTCTGCAGCATAATACCAACAACAGGAGTGTTTTAAAGCAGGATGGAGAACAATGCTACGTATCTTaGCAAAGTTCGGTATACCAA +
Preference number: 5 (lower is better)
Translates to: TTLQHNTNNRSVLKQDGEQCYVS*QSSVYQ
Trigger: TTGGTATACCGAACTTTGCAAAGATACGTAGCATTG...TTCTCCATCCTGCTTTAAAACACTCCTGTTGTTGGTATTATGCTGCAGAGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTTATCAGAGGGATCATaGCTAAAGGGACCCAAACGG +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCLSEGS*LKGPKR
Trigger: CCGTTTGGGTCCCTTTAGCAATGATCCCTCTGATAA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617828.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTTATTCTTGGAGCCTCTaGATTTCCCTTCGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCYSWSL*ISLRSS
Trigger: TGAACTCCGAAGGGAAATCAAGAGGCTCCAAGAATA...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAGAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCAATCTGTCTGCAGTGTTaGAAGGCAAGACAGATAATC +
Preference number: 5 (lower is better)
Translates to: EESRQYNLRFPLSFPLFSICLQC*KARQII
Trigger: GATTATCTGTCTTGCCTTCAAACACTGCAGACAGAT...TGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000615182.5
ENST00000617828.4
ENST00000620628.4
ENST00000633468.1
CDS-3UTR CAA 90 bp GAAAGTAGACAATACAACTTAAGGTTTCCTTTGTCCTTTCCCCTGTTTTCACCATACATGGAAAGAGATTaGTTCTTTATTTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: ESRQYNLRFPLSFPLFSPYMERD*FFISHH
Trigger: GTGGTGGGAAATAAAGAACAAATCTCTTTCCATGTA...TGGTGAAAACAGGGGAAAGGACAAAGGAAACCTTAAGTTGTATTGTCTACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000633468.1
CDS-3UTR CAA 90 bp GTTACAAGAGGTGTTAGGAATGAATGCCCACTCACATTTAATAATAGCTTATGTATTCTGCAGAAACGTTaGAGGACCAAGTTTTACATG +
Preference number: 5 (lower is better)
Translates to: VTRGVRNECPLTFNNSLCILQKR*RTKFYM
Trigger: CATGTAAAACTTGGTCCTCAAACGTTTCTGCAGAAT...ACATAAGCTATTATTAAATGTGAGTGGGCATTCATTCCTAACACCTCTTGTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615182.5
ENST00000633468.1
CDS CAA 90 bp GGGCAGGAGTCCACGTTGGGAGGAGGAAAGGCGCAGGCTCCCGAGTaGTGGAGCCAACGTTCAAATCCTTACGGGGTGGGACCGGCCTGG +
Preference number: 6 (lower is better)
Translates to: GQESTLGGGKAQAPE*WSQRSNPYGVGPAW
Trigger: CCAGGCCGGTCCCACCCCGTAAGGATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGCCTTTCCTCCTCCCAACGTGGACTCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615328.4
ENST00000621780.1
ENST00000622522.2
ENST00000632146.1
ENST00000632358.1
CDS TCA 72 bp CCAGACCAAAGCTTGATGACTCCCGGGAGAAGGAAGTaGGGCACTTCGCCGGGCAGGAGTCCACGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: PDQSLMTPGRRK*GTSPGRSPRWE
Trigger: CTCCCAACGTGGACTCCTGCCCGGCGAAGTGCCTCACTTCCTTCTCCCGGGAGTCATCAAGCTTTGGTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615328.4
ENST00000632146.1
CDS CCA 72 bp ACGTTGGGAGGAGGAAAGGCGCAGGCTCCCGAGTTGTaGAGCCAACGTTCAAATCCTTACGGGGTGGGACCG +
Preference number: 6 (lower is better)
Translates to: TLGGGKAQAPEL*SQRSNPYGVGP
Trigger: CGGTCCCACCCCGTAAGGATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGCCTTTCCTCCTCCCAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615328.4
ENST00000621780.1
ENST00000622522.2
ENST00000632146.1
ENST00000632358.1
CDS CAA 72 bp TCCACGTTGGGAGGAGGAAAGGCGCAGGCTCCCGAGTaGTGGAGCCAACGTTCAAATCCTTACGGGGTGGGA +
Preference number: 6 (lower is better)
Translates to: STLGGGKAQAPE*WSQRSNPYGVG
Trigger: TCCCACCCCGTAAGGATTTGAACGTTGGCTCCACAACTCGGGAGCCTGCGCCTTTCCTCCTCCCAACGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000612272.4
ENST00000615328.4
ENST00000621780.1
ENST00000622522.2
ENST00000632146.1
ENST00000632358.1
CDS TCA 72 bp ATACACCAAAGCTTGATGACTCCCGGGAGAAGGAAGTaGGGCACTTCGCCGGGCAGGAGTCCACGTTGGGAG +
Preference number: 6 (lower is better)
Translates to: IHQSLMTPGRRK*GTSPGRSPRWE
Trigger: CTCCCAACGTGGACTCCTGCCCGGCGAAGTGCCTCACTTCCTTCTCCCGGGAGTCATCAAGCTTTGGTGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000612272.4
ENST00000621780.1
ENST00000622522.2
ENST00000632358.1
CDS CCA 72 bp AGGCTCCATGAGGTAGGAGGAGCAGCCTCGGCAAGGTaGCTTATCAGAGGGATCATTGCTAAAGGGACCCAA +
Preference number: 6 (lower is better)
Translates to: RLHEVGGAASAR*LIRGIIAKGTQ
Trigger: TTGGGTCCCTTTAGCAATGATCCCTCTGATAAGCCACCTTGCCGAGGCTGCTCCTCCTACCTCATGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000617828.4
ENST00000622522.2
ENST00000631413.1
ENST00000631626.1
ENST00000632354.1
ENST00000633468.1
ENST00000633475.1
ENST00000633584.1
CDS CCA 72 bp CTTCTAAAAGGGCCATTTCTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAATCTGAAGTCTGCAAGC +
Preference number: 6 (lower is better)
Translates to: LLKGPFLLEQSS*DQGQENLKSAS
Trigger: GCTTGCAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620838.4
ENST00000633475.1
CDS CAA 72 bp GTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTaGATTGGCTACATCTTGCCTCTAAATCATGGGTTG +
Preference number: 6 (lower is better)
Translates to: VLLTLLLGLGAH*IGYILPLNHGL
Trigger: CAACCCATGATTTAGAGGCAAGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000620086.4
ENST00000633431.1
CDS CCA 72 bp CTTCTAAAAGGGCCATTTCTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAATCTGAAGTCTGTAGTC +
Preference number: 6 (lower is better)
Translates to: LLKGPFLLEQSS*DQGQENLKSVV
Trigger: GACTACAGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000620086.4
ENST00000633431.1
CDS CAA 90 bp TGCTCAAGGCTCAAAAACCACCTACATGCATGGCTTTCAATGAATTaGTCATGTTCCACTGGCCCCACAATTCTTGCAAATCGCCTCATT +
Preference number: 6 (lower is better)
Translates to: CSRLKNHLHAWLSMN*SCSTGPTILANRLI
Trigger: AATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGTAGGTGGTTTTTGAGCCTTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS GCA 72 bp ATGAGTGCTCTTGCCTGCGCCAGTCTTAAGCCTCCTTaGTTGTTACATTCGTTCAATAGAGCAGATTTGTAT +
Preference number: 6 (lower is better)
Translates to: MSALACASLKPP*LLHSFNRADLY
Trigger: ATACAAATCTGCTCTATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACTGGCGCAGGCAAGAGCACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000619335.4
ENST00000620628.4
ENST00000622522.2
ENST00000632509.1
ENST00000633468.1
CDS CCA 72 bp AAATACTGCTCAAGGCTCAAAAACCACCTACATGCATaGCTTTCAATGAATTTGTCATGTTCCACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: KYCSRLKNHLHA*LSMNLSCSTGP
Trigger: GGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGTAGGTGGTTTTTGAGCCTTGAGCAGTATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS CAA 72 bp AGTGCTCTTGCCTGCGCCAGTCTTAAGCCTCCTTGCTaGTTACATTCGTTCAATAGAGCAGATTTGTATTCT +
Preference number: 6 (lower is better)
Translates to: SALACASLKPPC*LHSFNRADLYS
Trigger: AGAATACAAATCTGCTCTATTGAACGAATGTAACAAGCAAGGAGGCTTAAGACTGGCGCAGGCAAGAGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000612272.4
ENST00000615182.5
ENST00000617828.4
ENST00000619335.4
ENST00000620628.4
ENST00000622522.2
ENST00000632509.1
ENST00000633468.1
CDS CCA 72 bp CTAAACATCCCATATCCTCGTGACACATTTCGACACTaGAAAAATAATGTACAGAGGGGACTAACTTGCCTC +
Preference number: 6 (lower is better)
Translates to: LNIPYPRDTFRH*KNNVQRGLTCL
Trigger: GAGGCAAGTTAGTCCCCTCTGTACATTATTTTTCCAGTGTCGAAATGTGTCACGAGGATATGGGATGTTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000610834.4
ENST00000631626.1
CDS CCA 72 bp ACATGCATGGCTTTCAATGAATTTGTCATGTTCCACTaGCCCCACAATTCTTGCAAATCGCCTCATTGTTTC +
Preference number: 6 (lower is better)
Translates to: TCMAFNEFVMFH*PHNSCKSPHCF
Trigger: GAAACAATGAGGCGATTTGCAAGAATTGTGGGGCCAGTGGAACATGACAAATTCATTGAAAGCCATGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000620367.4
ENST00000633584.1
CDS TCA 72 bp TGGGTTGATAGGAAAGCAACACATACTTTCTCTTCCTaGGGTTCCTTCCTTTACTCTTCAACAACAGCTTCT +
Preference number: 6 (lower is better)
Translates to: WVDRKATHTFSS*GSFLYSSTTAS
Trigger: AGAAGCTGTTGTTGAAGAGTAAAGGAAGGAACCTCAGGAAGAGAAAGTATGTGTTGCTTTCCTATCAACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000610834.4
ENST00000620086.4
ENST00000620838.4
ENST00000631626.1
ENST00000633431.1
ENST00000633475.1
CDS CCA 72 bp CTTCTAAAAGGGCCATTTCTTCTTGAGCAGTCCAGCTaGGATCAAGGACAGGAAAATCTGAAGTCATTATTT +
Preference number: 6 (lower is better)
Translates to: LLKGPFLLEQSS*DQGQENLKSLF
Trigger: AAATAATGACTTCAGATTTTCCTGTCCTTGATCCCAGCTGGACTGCTCAAGAAGAAATGGCCCTTTTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000610834.4
ENST00000612272.4
ENST00000614122.4
ENST00000615182.5
ENST00000617828.4
ENST00000620367.4
ENST00000620628.4
ENST00000621780.1
ENST00000622522.2
ENST00000631413.1
ENST00000631626.1
ENST00000632358.1
ENST00000633468.1
ENST00000633584.1
CDS CCA 72 bp GCTTCATATAGTGCTTCTCACACTCCTCCTTGGTCTTaGTGCACATTTGATTGGCTACATCCATTATTTCAT +
Preference number: 6 (lower is better)
Translates to: ASYSASHTPPWS*CTFDWLHPLFH
Trigger: ATGAAATAATGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCACTATATGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614112.4
ENST00000632354.1
CDS CAA 72 bp GTGCTTCTCACACTCCTCCTTGGTCTTGGTGCACATTaGATTGGCTACATCCATTATTTCATAAGTATGATC +
Preference number: 6 (lower is better)
Translates to: VLLTLLLGLGAH*IGYIHYFISMI
Trigger: GATCATACTTATGAAATAATGGATGTAGCCAATCAAATGTGCACCAAGACCAAGGAGGAGTGTGAGAAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614112.4
ENST00000632354.1