RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TACR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000115353

Ensembl transcript IDs: ENST00000305249.10, ENST00000409848.3, ENST00000497764.1

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGAGGGTGTTTCTGATGGTTCCAGATGAAGGGAATTTCCATGCATaGAGGGAGGCAGGTCAAAGGCAGTGGGGGCTGCACCTGCCAAAG +
Preference number: 1 (lower is better)
Translates to: VRVFLMVPDEGNFHA*REAGQRQWGLHLPK
Trigger: CTTTGGCAGGTGCAGCCCCCACTGCCTTTGACCTGCCTCCCTTCATGCATGGAAATTCCCTTCATCTGGAACCATCAGAAACACCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp GAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTaGAGGGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: EAGKAMEQGGDIQRV*REDARCPLPRSAAA
Trigger: TGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCCCTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp ACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTaGAGAATTCATCCTGAAATGAGCACTCGCATGCAGCCAAAGTCA +
Preference number: 1 (lower is better)
Translates to: TRGSRKMSLPGPQLC*RIHPEMSTRMQPKS
Trigger: TGACTTTGGCTGCATGCGAGTGCTCATTTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp GTAACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTaGTGCAGAATTCATCCTGAAATGAGCACTCGCATGCAGCCAAAG +
Preference number: 1 (lower is better)
Translates to: VTRGSRKMSLPGPQL*CRIHPEMSTRMQPK
Trigger: CTTTGGCTGCATGCGAGTGCTCATTTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp AGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTGAAGGGAAGATaGAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: SHGAGRRHSESLKGR*KMPSSQKCSCKVQP
Trigger: AGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCCCTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp ACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTaGCATATTGGAAACTGCCCGGACCACCCAACATTCCCTCTTACT +
Preference number: 1 (lower is better)
Translates to: TGSEEGLLALSKQML*HIGNCPDHPTFPLT
Trigger: AGTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp CAAGTCTCCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTaGACATATTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGG +
Preference number: 1 (lower is better)
Translates to: QVSQFLVCKRTSRYQ*TYSACVGCSGQSPG
Trigger: CCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGGAGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp CAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCTCCCTTTaGAAGTACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGT +
Preference number: 1 (lower is better)
Translates to: QPNSFRSPGLTASSL*KYPRELSFQRLSKG
Trigger: ACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp AGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTaGAAACTGCCCGGACCACCCAACATTCCCTCTTACTATGCACAG +
Preference number: 1 (lower is better)
Translates to: RGRLAGTVQADALPY*KLPGPPNIPSYYAQ
Trigger: CTGTGCATAGTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp AGGGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTaGAGCCTTCTTGCTTGTCGCACATATGAGCACGATGCTAGTGTA +
Preference number: 1 (lower is better)
Translates to: REDARCPLPRSAAAK*SLLACRTYEHDASV
Trigger: TACACTAGCATCGTGCTCATATGTGCGACAAGCAAGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp AGGTTTTCTGGCTTATACTGTTTCTTCTTCCCCCAGGCCTGTGGATaGCCTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAA +
Preference number: 1 (lower is better)
Translates to: RFSGLYCFFFPQACG*PGRIRASRAGKGCK
Trigger: TTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAGGGCATCCACAGGCCTGGGGGAAGAAGAAACAGTATAAGCCAGAAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp GGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTaGCCGGACCACCCAACATTCCCTCTTACTATGCACAGAGATGAT +
Preference number: 1 (lower is better)
Translates to: GLLALSKQMLCHIGN*PDHPTFPLTMHRDD
Trigger: ATCATCTCTGTGCATAGTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp GAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATTCATCCTaGAATGAGCACTCGCATGCAGCCAAAGTCACTTCCAGAATGGAA +
Preference number: 1 (lower is better)
Translates to: ENESSGSAAVLQNSS*NEHSHAAKVTSRME
Trigger: TTCCATTCTGGAAGTGACTTTGGCTGCATGCGAGTGCTCATTTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp TCCTTTAGGGTTGATGAGTCATTCTACCCCTTAGAGACAGGAAGCTaGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTGAAG +
Preference number: 1 (lower is better)
Translates to: SFRVDESFYPLETGS*QSHGAGRRHSESLK
Trigger: CTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAAGGGGTAGAATGACTCATCAACCCTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp CAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTaGGTGTGGGTTTTTAGAATTCTGTGGAGAATCTGTCCTCTCAGA +
Preference number: 1 (lower is better)
Translates to: QRLSKGPSLWLDCPC*VWVFRILWRICPLR
Trigger: TCTGAGAGGACAGATTCTCCACAGAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTTTGGAGAGCCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp ACAGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTaGCTGCCAGCTCCCTTTGGAAGTACCCCAGAGAACTCTCATTCC +
Preference number: 1 (lower is better)
Translates to: TEMILFNQIPLGPLD*LPAPFGSTPENSHS
Trigger: GGAATGAGAGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp AAGGTTAAAGCAGGGAGCCCACATTTGTCTTCTCTGACAGTGTTCTaGAGCTATGAAATTCTGCCTGCTAAAGCTGGATGGATGCAGGCC +
Preference number: 1 (lower is better)
Translates to: KVKAGSPHLSSLTVF*SYEILPAKAGWMQA
Trigger: GGCCTGCATCCATCCAGCTTTAGCAGGCAGAATTTCATAGCTGCAGAACACTGTCAGAGAAGACAAATGTGGGCTCCCTGCTTTAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp CCTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATaGATTATTCTCCCCTTAATGTTATGGATGCGGCACATGTGCATC +
Preference number: 1 (lower is better)
Translates to: PGRIRASRAGKGCKP*IILPLMLWMRHMCI
Trigger: GATGCACATGTGCCGCATCCATAACATTAAGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTaGAAGCCCGAGGTTCTCAATCTCATGATGTATAAATGTACTGAA +
Preference number: 1 (lower is better)
Translates to: FCLRRLLRTVTGDIM*KPEVLNLMMYKCTE
Trigger: TTCAGTACATTTATACATCATGAGATTGAGAACCTCGGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp ACTTATACTCCTCTCCTCACAAATCAGGCCAATGAGGTCAGTTCCTaGGTCCCCTTTCTCCAGGATTCCACTCAGTCCTTGTCTCTTAGT +
Preference number: 1 (lower is better)
Translates to: TYTPLLTNQANEVSS*VPFLQDSTQSLSLS
Trigger: ACTAAGAGACAAGGACTGAGTGGAATCCTGGAGAAAGGGGACTCAGGAACTGACCTCATTGGCCTGATTTGTGAGGAGAGGAGTATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp GCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTTAATGTTATaGATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGAC +
Preference number: 1 (lower is better)
Translates to: AGKGCKPCIILPLML*MRHMCIHYANYQED
Trigger: GTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATCCATAACATTAAGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp ATCGGAGAATGTCTGAGATGGATAGTTACAGATGGCCTTAGCAGTTaGTACATCTCCAGGAACTGGGTATTAGTTACAAGACTCACTGCT +
Preference number: 1 (lower is better)
Translates to: IGECLRWIVTDGLSS*YISRNWVLVTRLTA
Trigger: AGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATCTGTAACTATCCATCTCAGACATTCTCCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp CTGGTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTaGTTTGAGTCACACAGCATGAGGGTGGCAAAGATAGGGAAGAAT +
Preference number: 1 (lower is better)
Translates to: LVRPFILQAQQSSVI*FESHSMRVAKIGKN
Trigger: ATTCTTCCCTATCTTTGCCACCCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp CCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTaGGTCACACAGCATGAGGGTGGCAAAGATAGGGAAGAATTGAGA +
Preference number: 1 (lower is better)
Translates to: PTFYFTGSAKFSDLV*VTQHEGGKDREELR
Trigger: TCTCAATTCTTCCCTATCTTTGCCACCCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp TATTCTCCCCTTAATGTTATGGATGCGGCACATGTGCATCCATTATaGAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCT +
Preference number: 1 (lower is better)
Translates to: YSPLNVMDAAHVHPL*KLPGGHSWMLHEAS
Trigger: AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATCCATAACATTAAGGGGAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 90 bp AAACCATGCATTATTCTCCCCTTAATGTTATGGATGCGGCACATGTaGATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTAC +
Preference number: 1 (lower is better)
Translates to: KPCIILPLMLWMRHM*IHYANYQEDIHGCY
Trigger: GTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATCCATAACATTAAGGGGAGAATAATGCATGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 90 bp TGGATAGTTACAGATGGCCTTAGCAGTTGCTACATCTCCAGGAACTaGGTATTAGTTACAAGACTCACTGCTCCTATTCTTTTCTATTCT +
Preference number: 1 (lower is better)
Translates to: WIVTDGLSSCYISRN*VLVTRLTAPILFYS
Trigger: AGAATAGAAAAGAATAGGAGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATCTGTAACTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 90 bp TCTAAATTAGGATATAAAGCATTCAGTTCATGGCTCTTGGAAGACTaGCTGTCCTTTAGGGTTGATGAGTCATTCTACCCCTTAGAGACA +
Preference number: 1 (lower is better)
Translates to: SKLGYKAFSSWLLED*LSFRVDESFYPLET
Trigger: TGTCTCTAAGGGGTAGAATGACTCATCAACCCTAAAGGACAGTCAGTCTTCCAAGAGCCATGAACTGAATGCTTTATATCCTAATTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTGTCAAGCGTAGGCTaGGGTGATAGGAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: WTLETGSEEGLLALSKQMLSSVG*GDRSLQ
Trigger: CTGGAGGCTCCTATCACCCCAGCCTACGCTTGACAG...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 90 bp GACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTaGCCATATTGGAAACTGCCCGGACCACCCAACATTCCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: DWVRGRLAGTVQADA*PYWKLPGPPNIPSY
Trigger: GTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACCGGGTCCGCAGCTGTaGTGCAGAATTCATCCTGAA +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGPGPQL*CRIHPE
Trigger: TTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGG...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACCCTCTTCCCAGAAGTaGAGCTGCAAAGTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGPSSQK*SCKVQP
Trigger: AGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGG...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAAAGCTGGCAAAGCCATaGAGCAGGGAGGAGACATTC +
Preference number: 2 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPKLAKP*SREETF
Trigger: GAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTT...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGTTAGAGACAGGAAGCTaGCAAAGCCATGGAGCAGGG +
Preference number: 2 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVLETGS*QSHGAG
Trigger: CCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCCTTCTCTTCCATAGATaGGGTGTCCCCAACTTCTTG +
Preference number: 2 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGLLFHR*GVPNFL
Trigger: CAAGAAGTTGGGGACACCCCATCTATGGAAGAGAAG...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGATCCCAGTCTTTGGCTTaGCTGCCCATGTTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGSQSLA*LPMLSV
Trigger: CACACTCAACATGGGCAGTCAAGCCAAAGACTGGGA...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAACCGGGGACATAATGTaGAAGCCCGAGGTTCTCAAT +
Preference number: 2 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPTGDIM*KPEVLN
Trigger: ATTGAGAACCTCGGGCTTCCACATTATGTCCCCGGT...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGAACTGCCAGCTCCCTTTaGAAGTACCCCAGAGAACTC +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGTASSL*KYPREL
Trigger: GAGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGT...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATaGGAAACTGCCCGGACCACCCAACATTCCCTCTTACTATGCACA +
Preference number: 2 (lower is better)
Translates to: QRKACWHCPSRCFAI*ETARTTQHSLLLCT
Trigger: TGTGCATAGTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTTGGACATATTCTGCTTaGGTCGGCTGCTCAGGACAG +
Preference number: 2 (lower is better)
Translates to: LETGSWQSHGAGRRHSESWTYSA*VGCSGQ
Trigger: CTGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCA...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGATCTGTCCTCTCAGATaGCTCCAAGACTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQICPLR*LQDCWA
Trigger: TGCCCAGCAGTCTTGGAGGCATCTGAGAGGACAGAT...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp CTTTTTGCAAGTCCCAGTGTGAGGGTGTTTCTGATGGTTCCAGATGAAGGGAATGCAGGTCAAAGGCAGTaGGGGCTGCACCTGCCAAAG +
Preference number: 2 (lower is better)
Translates to: LFASPSVRVFLMVPDEGNAGQRQ*GLHLPK
Trigger: CTTTGGCAGGTGCAGCCCCCACTGCCTTTGACCTGC...ATTCCCTTCATCTGGAACCATCAGAAACACCCTCACACTGGGACTTGCAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTGATGGATGCAGGCCTTaGCATGAAGTCCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: LETGSWQSHGAGRRHSESDGCRP*HEVLCS
Trigger: AGAGCAGAGGACTTCATGCCAAGGCCTGCATCCATC...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCATTCAGTGATTTGGTTTaGGTCACACAGCATGAGGGT +
Preference number: 2 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPFSDLV*VTQHEG
Trigger: ACCCTCATGCTGTGTGACTCAAACCAAATCACTGAA...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATACTTCCAGAATGGAATaGATGGGCTTTTGGGAAAAG +
Preference number: 2 (lower is better)
Translates to: NTGLQENESSGSAAVLQNTSRME*MGFWEK
Trigger: CTTTTCCCAAAAGCCCATTCATTCCATTCTGGAAGT...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTTCAGTGGACATATTCTaGTTGCGTCGGCTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: QRKACWHCPSRCFAILETSVDIF*LRRLLR
Trigger: CCTGAGCAGCCGACGCAAGCAGAATATGTCCACTGA...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGGGGCTCCAGGAAAATaGGTCTTCCGGGTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASGAPGK*VFRVRS
Trigger: GCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCC...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCAATGTACTGAAATACTaGGATGCCAAAAAGGGGAAT +
Preference number: 2 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGNVLKY*DAKKGN
Trigger: ATTCCCCTTTTTGGCATCTCAGTATTTCAGTACATT...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCATACTGACCCTTTTTaGAAGTCCCAGTGTGAGGGT +
Preference number: 2 (lower is better)
Translates to: LETGSWQSHGAGRRHSESHTDPF*KSQCEG
Trigger: ACCCTCACACTGGGACTTGCAAAAAGGGTCAGTATG...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTTCTGCTTGCGTCGGCTaGTCAGGACAGTCACCGGGG +
Preference number: 2 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASSACVG*SGQSPG
Trigger: CCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGA...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGATGGCCTTAGCAGTTaGTACATCTCCAGGAACTGG +
Preference number: 2 (lower is better)
Translates to: QRKACWHCPSRCFAILETDGLSS*YISRNW
Trigger: CCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATC...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGATGGCATGAAGTCCTCTaGTCTGTCAAAAGCCAAAAC +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGWHEVL*SVKSQN
Trigger: GTTTTGGCTTTTGACAGAGCAGAGGACTTCATGCCA...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTACTAGCAGGTATCAGTaGACATATTCTGCTTGCGTC +
Preference number: 2 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSTSRYQ*TYSACV
Trigger: GACGCAAGCAGAATATGTCCACTGATACCTGCTAGT...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGGGAGAATGTCTGAGATaGATAGTTACAGATGGCCTT +
Preference number: 2 (lower is better)
Translates to: WTLETGSEEGLLALSKQMGECLR*IVTDGL
Trigger: AAGGCCATCTGTAACTATCCATCTCAGACATTCTCC...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTTGGCTCTTGGAAGACTaGCTGTCCTTTAGGGTTGAT +
Preference number: 2 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPWLLED*LSFRVD
Trigger: ATCAACCCTAAAGGACAGTCAGTCTTCCAAGAGCCA...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 90 bp GAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTaGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ENSHSRGSPKVPVFG*TAHVECGFLEFCGE
Trigger: TTCTCCACAGAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTCATGTGCATCCATTATaGAAACTACCAGGAGGACAT +
Preference number: 2 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLHVHPL*KLPGGH
Trigger: ATGTCCTCCTGGTAGTTTGCATAATGGATGCACATG...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTTGGATGCGGCACATGTaGATCCATTATGCAAACTAC +
Preference number: 2 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPWMRHM*IHYANY
Trigger: GTAGTTTGCATAATGGATGCACATGTGCCGCATCCA...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGAGCCAAAACCTTCCATaGGAAGGAATGTACTCAGGA +
Preference number: 2 (lower is better)
Translates to: PGGHSWMLHEASASSHIWSQNLP*EGMYSG
Trigger: TCCTGAGTACATTCCTTCTCATGGAAGGTTTTGGCT...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTTACATTCTTCCAAAGTaGGTAATCCATACACAGCAA +
Preference number: 2 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLYILPK*VIHTQQ
Trigger: TTGCTGTGTATGGATTACTCACTTTGGAAGAATGTA...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTTTAGATGTTATGTGGTaGCTTCTTTTGTTCACCCTG +
Preference number: 2 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPLDVMW*LLLFTL
Trigger: CAGGGTGAACAAAAGAAGGCACCACATAACATCTAA...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGAAGTTACAAGACTCACTaGTCCTATTCTTTTCTATTC +
Preference number: 2 (lower is better)
Translates to: RLAGTVQADALPYWKLPGSYKTH*SYSFLF
Trigger: GAATAGAAAAGAATAGGAGCAGTGAGTCTTGTAACT...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTCAAAGTTCAGTGATTTaGTTTGAGTCACACAGCATG +
Preference number: 2 (lower is better)
Translates to: QRKACWHCPSRCFAILETQSSVI*FESHSM
Trigger: CATGCTGTGTGACTCAAACCAAATCACTGAACTTTG...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCAGTTCATGGCTCTTaGAAGACTGACTGTCCTTTA +
Preference number: 2 (lower is better)
Translates to: LVELEPAGLAKAVNHALFSVHGS*KTDCPL
Trigger: TAAAGGACAGTCAGTCTTCCAAGAGCCATGAACTGA...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTAGAGAATGTAGTTCTTaGGGTTTTCTGGCTTATACT +
Preference number: 2 (lower is better)
Translates to: QRKACWHCPSRCFAILETRECSS*GFLAYT
Trigger: AGTATAAGCCAGAAAACCTCAAGAACTACATTCTCT...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCAAGTCACTTCCAGAATaGAATGAATGGGCTTTTGGG +
Preference number: 2 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFKSLPE*NEWAFG
Trigger: CCCAAAAGCCCATTCATTCCATTCTGGAAGTGACTT...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCAAGTCTCCCAATTCCTaGTCTGTAAGAGAACTAGCA +
Preference number: 2 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFKSPNS*SVRELA
Trigger: TGCTAGTTCTCTTACAGACCAGGAATTGGGAGACTT...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTGGGAATTTCCATGCATaGAGGGAGGCAGGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASGNFHA*REAGQR
Trigger: CCTTTGACCTGCCTCCCTTCATGCATGGAAATTCCC...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp GAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGAAAATCTGATGGTTCCAGATaGAGGGAATTTCCATGCATG +
Preference number: 2 (lower is better)
Translates to: EDIHGCYMKLLLPAISGKSDGSR*REFPCM
Trigger: CATGCATGGAAATTCCCTTCATCTGGAACCATCAGA...TTTTCCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR TCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTGCAGGAGGCTAATCTaGGATAACTTTATTGAAGTA +
Preference number: 2 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMCRRLI*DNFIEV
Trigger: TACTTCAATAAAGTTATCTCAGATTAGCCTCCTGCA...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCAAAGGCTGTAAACCATaGATTATTCTCCCCTTAATG +
Preference number: 2 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASKGCKP*IILPLM
Trigger: CATTAAGGGGAGAATAATGCATGGTTTACAGCCTTT...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTTTTTTGACTCAAGGATaGAATGTTTTCCCTAACCCA +
Preference number: 2 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASFLTQG*NVFPNP
Trigger: TGGGTTAGGGAAAACATTCCATCCTTGAGTCAAAAA...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTCATTTAGATGTTATGTaGTGCCTTCTTTTGTTCACC +
Preference number: 2 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASHLDVM*CLLLFT
Trigger: GGTGAACAAAAGAAGGCACCACATAACATCTAAATG...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR GCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTACTGAAATACTGAGATaGCAAAAAGGGGAATACATA +
Preference number: 2 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASTEILR*QKGEYI
Trigger: TATGTATTCCCCTTTTTGGCATCTCAGTATTTCAGT...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGGACTGCCAGCTCCCTTaGGAAGTACCCCAGAGAACT +
Preference number: 3 (lower is better)
Translates to: WTLETGSEEGLLALSKQMDCQLP*EVPQRT
Trigger: AGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGTC...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp TCTTCCGGGTCCGCAGCTGTGCTGCAGAATTCATCCTaGAATGAGCACTCGCATGCAGCCAAAGTCACTTCC +
Preference number: 3 (lower is better)
Translates to: SSGSAAVLQNSS*NEHSHAAKVTS
Trigger: GGAAGTGACTTTGGCTGCATGCGAGTGCTCATTTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp GGCTTATACTGTTTCTTCTTCCCCCAGGCCTGTGGATaGCCTGGTAGAATTAGAGCCAGCAGGGCTGGCAAA +
Preference number: 3 (lower is better)
Translates to: GLYCFFFPQACG*PGRIRASRAGK
Trigger: TTTGCCAGCCCTGCTGGCTCTAATTCTACCAGGGCATCCACAGGCCTGGGGGAAGAAGAAACAGTATAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp CCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACCACCCAACATTCCCTCGGAATGAATGGGCTTTaGGGAAAAGCTGGTCCGACC +
Preference number: 3 (lower is better)
Translates to: PSRCFAILETARTTQHSLGMNGL*GKAGPT
Trigger: GGTCGGACCAGCTTTTCCCAAAAGCCCATTCATTCC...GAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGAGTCCCAGTCTTTGGCTaGACTGCCCATGTTGAGTGT +
Preference number: 3 (lower is better)
Translates to: RLAGTVQADALPYWKLPGVPVFG*TAHVEC
Trigger: ACACTCAACATGGGCAGTCAAGCCAAAGACTGGGAC...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp GGGGTGATAGGAGCCTCCAGCTGCAGGAGGCTAATCTaGGATAACTTTATTGAAGTAACACGGGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GVIGASSCRRLI*DNFIEVTRGSR
Trigger: CCTGGAGCCCCGTGTTACTTCAATAAAGTTATCTCAGATTAGCCTCCTGCAGCTGGAGGCTCCTATCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp ATTCTACCCCTTAGAGACAGGAAGCTGGCAAAGCCATaGAGCAGGGAGGAGACATTCAGAGAGTCTGAAGGG +
Preference number: 3 (lower is better)
Translates to: ILPLRDRKLAKP*SREETFRESEG
Trigger: CCCTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAAGGGGTAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTaGAAACTGCCCGGACCACCCAACATTCCCTCTTAC +
Preference number: 3 (lower is better)
Translates to: LAGTVQADALPY*KLPGPPNIPSY
Trigger: GTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGGTGGACATATTCTGCTaGCGTCGGCTGCTCAGGACA +
Preference number: 3 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMVDIFC*RRLLRT
Trigger: TGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCAC...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGGTCCAAGCAGATGCTTaGCCATATTGGAAACTGCCC +
Preference number: 3 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQVQADA*PYWKLP
Trigger: GGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGAC...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp AAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTaGAGGGAAGATGCAAGATGCCCTCTTCCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: KAMEQGGDIQRV*REDARCPLPRS
Trigger: ACTTCTGGGAAGAGGGCATCTTGCATCTTCCCTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp GCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTaGCCGGACCACCCAACATTCCCTCTTACTATGCAC +
Preference number: 3 (lower is better)
Translates to: ALSKQMLCHIGN*PDHPTFPLTMH
Trigger: GTGCATAGTAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTaGAAGCCCGAGGTTCTCAATCTCATGATGTATAAA +
Preference number: 3 (lower is better)
Translates to: RRLLRTVTGDIM*KPEVLNLMMYK
Trigger: TTTATACATCATGAGATTGAGAACCTCGGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp AGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATaGCCCCTCTCCACTTATACTCCTCTCCTCACAAAT +
Preference number: 3 (lower is better)
Translates to: RRPGWKTRKPQE*PLSTYTPLLTN
Trigger: ATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGGATTCCACTCAGTCCTaGTCTCTTAGTGTCCTGTTG +
Preference number: 3 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQDSTQS*SLSVLL
Trigger: CAACAGGACACTAAGAGACAAGGACTGAGTGGAATC...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp GCAGGGAGCCCACATTTGTCTTCTCTGACAGTGTTCTaGAGCTATGAAATTCTGCCTGCTAAAGCTGGATGG +
Preference number: 3 (lower is better)
Translates to: AGSPHLSSLTVF*SYEILPAKAGW
Trigger: CCATCCAGCTTTAGCAGGCAGAATTTCATAGCTGCAGAACACTGTCAGAGAAGACAAATGTGGGCTCCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp ATGAGCACTCGCATGCAGCCAAAGTCACTTCCAGAATaGAATGAATGGGCTTTTGGGAAAAGCTGGTCCGAC +
Preference number: 3 (lower is better)
Translates to: MSTRMQPKSLPE*NEWAFGKSWSD
Trigger: GTCGGACCAGCTTTTCCCAAAAGCCCATTCATTCCATTCTGGAAGTGACTTTGGCTGCATGCGAGTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTaGACATATTCTGCTTGCGTCGGCTGCTCAGGACAG +
Preference number: 3 (lower is better)
Translates to: QFLVCKRTSRYQ*TYSACVGCSGQ
Trigger: CTGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATaGCCGCTTGGCCACTGTGTATGTAGATGGTCTTGT +
Preference number: 3 (lower is better)
Translates to: PSCLTAGFTHLG*PLGHCVCRWSC
Trigger: ACAAGACCATCTACATACACAGTGGCCAAGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
3UTR-3UTR CAA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTATGTGGTGCCTTCTTTaGTTCACCCTGTCAAGCGTA +
Preference number: 3 (lower is better)
Translates to: QRKACWHCPSRCFAILETMWCLL*FTLSSV
Trigger: TACGCTTGACAGGGTGAACAAAAGAAGGCACCACAT...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp ATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATaGATTATTCTCCCCTTAATGTTATGGATGCGGCAC +
Preference number: 3 (lower is better)
Translates to: IRASRAGKGCKP*IILPLMLWMRH
Trigger: GTGCCGCATCCATAACATTAAGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CTCGTTGAGCTCAACTCTAACCTTCTCTTCCATAGATaGGGTGTCCCCAACTTCTTGACACCATCTTCTCAG +
Preference number: 3 (lower is better)
Translates to: LVELNSNLLFHR*GVPNFLTPSSQ
Trigger: CTGAGAAGATGGTGTCAAGAAGTTGGGGACACCCCATCTATGGAAGAGAAGGTTAGAGTTGAGCTCAACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGGACTGTCCTTTAGGGTaGATGAGTCATTCTACCCCT +
Preference number: 3 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMDCPLG*MSHSTP
Trigger: AGGGGTAGAATGACTCATCAACCCTAAAGGACAGTC...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR-3UTR CAA 90 bp GAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGAAAAGCAGGGAGCCCACATTaGTCTTCTCTGACAGTGTTC +
Preference number: 3 (lower is better)
Translates to: EDIHGCYMKLLLPAISGKAGSPH*SSLTVF
Trigger: GAACACTGTCAGAGAAGACAAATGTGGGCTCCCTGC...TTTTCCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp GGATATAAAGCATTCAGTTCATGGCTCTTGGAAGACTaGCTGTCCTTTAGGGTTGATGAGTCATTCTACCCC +
Preference number: 3 (lower is better)
Translates to: GYKAFSSWLLED*LSFRVDESFYP
Trigger: GGGGTAGAATGACTCATCAACCCTAAAGGACAGTCAGTCTTCCAAGAGCCATGAACTGAATGCTTTATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp ACAGATGGCCTTAGCAGTTGCTACATCTCCAGGAACTaGGTATTAGTTACAAGACTCACTGCTCCTATTCTT +
Preference number: 3 (lower is better)
Translates to: TDGLSSCYISRN*VLVTRLTAPIL
Trigger: AAGAATAGGAGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATCTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp GTGCATCCATTATGCAAACTACCAGGAGGACATTCATaGATGTTACATGAAGCTTCTGCTTCCAGCCATATC +
Preference number: 3 (lower is better)
Translates to: VHPLCKLPGGHS*MLHEASASSHI
Trigger: GATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp TATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTaGGTCACACAGCATGAGGGTGGCAAAGATAGGGAA +
Preference number: 3 (lower is better)
Translates to: YFTGSAKFSDLV*VTQHEGGKDRE
Trigger: TTCCCTATCTTTGCCACCCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp TGTCTGAGATGGATAGTTACAGATGGCCTTAGCAGTTaGTACATCTCCAGGAACTGGGTATTAGTTACAAGA +
Preference number: 3 (lower is better)
Translates to: CLRWIVTDGLSS*YISRNWVLVTR
Trigger: TCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATCTGTAACTATCCATCTCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR GCA 72 bp ATTATTCTCCCCTTAATGTTATGGATGCGGCACATGTaGATCCATTATGCAAACTACCAGGAGGACATTCAT +
Preference number: 3 (lower is better)
Translates to: IILPLMLWMRHM*IHYANYQEDIH
Trigger: ATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATCCATAACATTAAGGGGAGAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CCA 72 bp CCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTaGTTTGAGTCACACAGCATGAGGGTGGCAAAGATA +
Preference number: 3 (lower is better)
Translates to: PFILQAQQSSVI*FESHSMRVAKI
Trigger: TATCTTTGCCACCCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp GTAATCCATACACAGCAAGATTCTCTATTGGAAGTATaGCTAATGCTTAGGGCACTAACTTTTGTTGCTTCT +
Preference number: 3 (lower is better)
Translates to: VIHTQQDSLLEV*LMLRALTFVAS
Trigger: AGAAGCAACAAAAGTTAGTGCCCTAAGCATTAGTCATACTTCCAATAGAGAATCTTGCTGTGTATGGATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR TCA 72 bp CTCATAATCATGTTAGCTCTTTACATTCTTCCAAAGTaGGTAATCCATACACAGCAAGATTCTCTATTGGAA +
Preference number: 3 (lower is better)
Translates to: LIIMLALYILPK*VIHTQQDSLLE
Trigger: TTCCAATAGAGAATCTTGCTGTGTATGGATTACTCACTTTGGAAGAATGTAAAGAGCTAACATGATTATGAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGGCCGCTGCCGCCGCCTaGAGTTTCGCGGGCACCTCT +
Preference number: 4 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVAAAAA*SFAGTS
Trigger: AGAGGTGCCCGCGAAACTGCAGGCGGCGGCAGCGGC...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCTGCAGCAGAGTCCTGTaGCTGGCGCCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPCSRVL*LAPGAQ
Trigger: CTGAGCCCCAGGCGCCAGCCACAGGACTCTGCTGCA...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCTTTGGTGGCTGTGGCTaGCAGCCGGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGIFGGCG*QPGLEG
Trigger: CCCCTCCAGCCCCGGCTGTCAGCCACAGCCACCAAA...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCAGTGGGGGCTGCACCTaGCAAAGGCCCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGSGGCT*QRPCGL
Trigger: TAGGCCACAGGGCCTTTGGCAGGTGCAGCCCCCACT...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCGCTGACAGCCGGGGCTaGAGGGGATGTATGATGGCC +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGADSRG*RGCMMA
Trigger: GGCCATCATACATCCCCTCCAGCCCCGGCTGTCAGC...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGCCAGGGACGAGGGTGTaGCCTTGGGGCCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVPGTRV*PWGRPL
Trigger: CAGAGGACGGCCCCAAGGCCACACCCTCGTCCCTGG...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCTGCAGCAGAGTCCTGTaGCTGGCGCCTGGGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGICSRVL*LAPGAQ
Trigger: CTGAGCCCCAGGCGCCAGCCACAGGACTCTGCTGCA...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAGGGGCTCCAGGAAAATaGGTCTTCCGGGTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPGAPGK*VFRVRS
Trigger: GCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCC...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCCAGCACCGGAAGGCATaGTTGAAGCCCAGACGGAAC +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGQHRKA*LKPRRN
Trigger: GTTCCGTCTGGGCTTCAAGCATGCCTTCCGGTGCTG...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCATCTGCTTGCGTCGGCTaGTCAGGACAGTCACCGGGG +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPSACVG*SGQSPG
Trigger: CCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGA...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCCATGGTCTCTGTGGTTaGGTAGTAGCCCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGHGLCG*VVALGE
Trigger: TTCCCCCAGGGCTACTACTCAACCACAGAGACCATG...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCATCAGGGCTCCTCCCTaGGAAAGCATGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPIRAPP*ESMRRK
Trigger: CTTCCTCCTCATGCTTTCTCAGGGAGGAGCCCTGAT...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCCGCTTCTGGATGCACTaGCCGCCTGCCCGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASRFWMH*PPARGG
Trigger: GCCACCGCGGGCAGGCGGGCAGTGCATCCAGAAGCG...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCCTGGCCATTCGATCATaGACACGACTCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGLAIRS*TRLCWA
Trigger: TGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAG...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCCCGGGTCCGCAGCTGTaGTGCAGAATTCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGPGPQL*CRIHPE
Trigger: TTCAGGATGAATTCTGCAGCACAGCTGCGGACCCGG...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGACGAGGGTGTGGCCTTaGGGCCGTCCTCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQTRVWP*GRPLAP
Trigger: AGGAGCCAGAGGACGGCCCCAAGGCCACACCCTCGT...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCTTCGTGAAGAGCAGTTaGAGGTCAGGTCCAGGGACG +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGFVKSS*RSGPGT
Trigger: CGTCCCTGGACCTGACCTCCAACTGCTCTTCACGAA...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTCCCCTGGAGAGCTCATaGGGTTGGGATCCTCACCTG +
Preference number: 4 (lower is better)
Translates to: STPGSHSWMVIISQAELCPLESS*GWDPHL
Trigger: CAGGTGAGGATCCCAACCCCATGAGCTCTCCAGGGG...ACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp CCCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTGTTTGGGGAGAGGTCTaGGTCCACCGGGAGGACGTT +
Preference number: 4 (lower is better)
Translates to: PHLSLLSHSWVYSFRMAAVWGEV*VHREDV
Trigger: AACGTCCTCCCGGTGGACTCAGACCTCTCCCCAAAC...AGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp ACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGATCAGAGGTCACCACAATaGCCGTGTAGGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TPGSHSWMVIISQAELCDQRSPQ*PCRQLP
Trigger: GGGCAGCTGCCTACACGGTCATTGTGGTGACCTCTG...ATCACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCTTTGGTGGCTGTGGCTaGCAGCCGGGGCTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASFGGCG*QPGLEG
Trigger: CCCCTCCAGCCCCGGCTGTCAGCCACAGCCACCAAA...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCCTTGGAGTCACTTCGTaGAGAGCAGTTGGAGGTCAG +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPLGVTS*RAVGGQ
Trigger: CTGACCTCCAACTGCTCTTCACGAAGTGACTCCAAG...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCGGGAATTTCCATGCATaGAGGGAGGCAGGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPGNFHA*REAGQR
Trigger: CCTTTGACCTGCCTCCCTTCATGCATGGAAATTCCC...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTCTTTTGCTGCCGCTaGCGCCGCCTGCAGTTTCGC +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESLFCCR*RRLQFR
Trigger: GCGAAACTGCAGGCGGCGGCAGCGGCAGCAAAAGAG...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TGGCCGCTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATTCATGCACACGACTCTaGTGGGCATGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: WPLGHCVCRWSCGPWRAHSCTRL*WAWSLW
Trigger: CCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGA...ATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAGCGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp CCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTTGCTGACAGCCGGGGCTaGAGGGGATGTATGATGGCC +
Preference number: 4 (lower is better)
Translates to: PTCPSCLTAGFTHLGWPLADSRG*RGCMMA
Trigger: GGCCATCATACATCCCCTCCAGCCCCGGCTGTCAGC...AAGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGCCACTTTGGTGGCTGTaGCTGACAGCCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQPLWWL*LTAGAG
Trigger: TCCAGCCCCGGCTGTCAGCCACAGCCACCAAAGTGG...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATGCACACGACTCTGCTaGGCATGGTCTCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGCTRLC*AWSLWL
Trigger: CAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCA...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp TCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTCATGGTCTCTGTGGTTaGGTAGTAGCCCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: STPGSHSWMVIISQAELCHGLCG*VVALGE
Trigger: TTCCCCCAGGGCTACTACTCAACCACAGAGACCATG...ACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATGGTAGAGATCTGGGTTaGTGTAGGGCAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: NTGLQENESSGSAAVLQNGRDLG*CRAGGR
Trigger: TCTTCCTCCTGCCCTACATCAACCCAGATCTCTACC...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TGGCCGCTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGTAGAGATCTGGGTTaGTGTAGGGCAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: WPLGHCVCRWSCGPWRAHGRDLG*CRAGGR
Trigger: TCTTCCTCCTGCCCTACATCAACCCAGATCTCTACC...ATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAGCGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTACCGGAAGGCATGCTTaGAGCCCAGACGGAACCTGT +
Preference number: 4 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSTGRHA*SPDGTC
Trigger: ACAGGTTCCGTCTGGGCTTCAAGCATGCCTTCCGGT...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCCATTGGAGGAGAAGCTaGAGCTCTCTGTCATGGTCT +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPHWRRS*SSLSWS
Trigger: AGACCATGACAGAGAGCTTCAGCTTCTCCTCCAATG...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCAATGAGGTCAGTTCCTaGGTCCCCTTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPNEVSS*VPFLQD
Trigger: ATCCTGGAGAAAGGGGACTCAGGAACTGACCTCATT...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGAGCCCAAAGGACAATTTaGCAGGCTGGTTGCACGAAC +
Preference number: 4 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGAQRTI*QAGCTN
Trigger: GTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGC...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp GCTGAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCCCACTTTGGTGGCTGTaGCTGACAGCCGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AELCDDKLAAVPTCPSCLPLWWL*LTAGAG
Trigger: TCCAGCCCCGGCTGTCAGCCACAGCCACCAAAGTGG...GAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGTGGGCATGGTCTCTGTaGTTGAGTAGTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMWAWSL*LSSSPG
Trigger: CCCAGGGCTACTACTCAACCACAGAGACCATGCCCA...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTCAGAGGTCACCACAATaGCCGTGTAGGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETQRSPQ*PCRQLP
Trigger: GGGCAGCTGCCTACACGGTCATTGTGGTGACCTCTG...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCCACTGGCCCATAGTGTaGTTCCCACTACGGTGTATG +
Preference number: 4 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGIHWPIV*FPLRCM
Trigger: CATACACCGTAGTGGGAATCACACTATGGGCCAGTG...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTTGGTCTCCAGGCGGCTaGCTTTGTACACACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESWSPGG*LCTHCP
Trigger: AGGGCAGTGTGTACAAAGTCAGCCGCCTGGAGACCA...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCGACATTCAGAGAGTCTaGAGGGAAGATGCAAGATGC +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPDIQRV*REDARC
Trigger: GCATCTTGCATCTTCCCTTCAGACTCTCTGAATGTC...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCCGCATTTATGCACCTaGTGCTGCCTGCAACTCCTA +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMPHLCT*CCLQLL
Trigger: TAGGAGTTGCAGGCAGCAGCAGGTGCATAAATGCGG...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGGACCGTGTAGGCAGCTaGCCAAAGGACAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMDRVGS*PKDNLP
Trigger: TGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTC...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGACCGTGTAGGCAGCTaGCCAAAGGACAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: STPGSHSWMVIISQAELCDRVGS*PKDNLP
Trigger: TGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTC...ACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp ACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGATCACCACTGTATTGAATaGAGCCATGGAGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TPGSHSWMVIISQAELCDHHCIE*SHGGLR
Trigger: GCGGAGGCCTCCATGGCTGCATTCAATACAGTGGTG...ATCACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGATCATGCACACGACTCTaGTGGGCATGGTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RLAGTVQADALPYWKLPGSCTRL*WAWSLW
Trigger: CCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGA...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTCTGGCCATTCGATCATaGACACGACTCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PHLSLLSHSWVYSFRMAALAIRS*TRLCWA
Trigger: TGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAG...AGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGAAGCAGATGGCGAAGGTaGACACCACGACAATCATCA +
Preference number: 4 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGSRWRR*TPRQSS
Trigger: TGATGATTGTCGTGGTGTGCACCTTCGCCATCTGCT...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGCCCCAGGCCTGTGGATaGCCTGGTAGAATTAGAGCC +
Preference number: 4 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQPQACG*PGRIRA
Trigger: GGCTCTAATTCTACCAGGGCATCCACAGGCCTGGGG...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp ACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGATTGGGCATGGTCTCTGTaGTTGAGTAGTAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPGSHSWMVIISQAELCDWAWSL*LSSSPG
Trigger: CCCAGGGCTACTACTCAACCACAGAGACCATGCCCA...ATCACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCACGACTCTGCTGGGCATaGTCTCTGTGGTTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPRLCWA*SLWLSS
Trigger: ACTACTCAACCACAGAGACCATGCCCAGCAGAGTCG...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCCGACTCTGCTGGGCATaGTCTCTGTGGTTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGIRLCWA*SLWLSS
Trigger: ACTACTCAACCACAGAGACCATGCCCAGCAGAGTCG...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCAGGTCAAAGGCAGTaGGGGCTGCACCTGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETAGQRQ*GLHLPK
Trigger: CTTTGGCAGGTGCAGCCCCCACTGCCTTTGACCTGC...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACAGAGGAAGGCTTGCTaGCACTGTCCAAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: RLAGTVQADALPYWKLPGQRKAC*HCPSRC
Trigger: GCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCGCCCCTCAATTACTGTaGTCTAGGAACTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGAPQLL*SRNCEF
Trigger: GAACTCACAGTTCCTAGACCACAGTAATTGAGGGGC...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGAGAGCTCATGGGGTTaGGATCCTCACCTGTCATTG +
Preference number: 4 (lower is better)
Translates to: LGHCVCRWSCGPWRAHGVESSWG*DPHLSL
Trigger: CAATGACAGGTGAGGATCCCAACCCCATGAGCTCTC...AACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGGTTTGGGGAGAGGTCTaGGTCCACCGGGAGGACGTT +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMVWGEV*VHREDV
Trigger: AACGTCCTCCCGGTGGACTCAGACCTCTCCCCAAAC...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp ACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGATGCTGGTTGCACGAACTaGTTGGGTTCCGAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: TPGSHSWMVIISQAELCDAGCTN*LGSEVL
Trigger: TAACACCTCGGAACCCAATCAGTTCGTGCAACCAGC...ATCACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp CTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTAGTTCACCACTGTATTaGATGCAGCCATGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LGHCVCRWSCGPWRAHGVSSPLY*MQPWRP
Trigger: AGGCCTCCATGGCTGCATTCAATACAGTGGTGAACT...AACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp CTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTCGACAATCATCATTTTaGCCACCTTGCGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGHCVCRWSCGPWRAHGVRQSSF*PPCAWQ
Trigger: CTGCCAAGCGCAAGGTGGTCAAAATGATGATTGTCG...AACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGTCCCACTACGGTGTATaGATAGCCAATCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMSHYGV*IANHQQ
Trigger: CTGCTGGTGATTGGCTATGCATACACCGTAGTGGGA...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCTCCCACTACGGTGTATaGATAGCCAATCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGISHYGV*IANHQQ
Trigger: CTGCTGGTGATTGGCTATGCATACACCGTAGTGGGA...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATCATACTGACCCTTTTTaGAAGTCCCAGTGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NTGLQENESSGSAAVLQNHTDPF*KSQCEG
Trigger: ACCCTCACACTGGGACTTGCAAAAAGGGTCAGTATG...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGAGGCTCTTCAAGAGCTaGAGGGGCTGTGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQRLFKS*RGCVFP
Trigger: TGGGAACACACAGCCCCTGCAGCTCTTGAAGAGCCT...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACCACCCAACATTCCCTCGAATATAAACGCTTCTaGATGCACTGCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSRCFAILETARTTQHSLEYKRF*MHCPPA
Trigger: GGCAGGCGGGCAGTGCATCCAGAAGCGTTTATATTC...GAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp ACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTGATAGGCCACAGCCGTCATaGAGTAGATACTGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: TPGSHSWMVIISQAELCDRPQPS*SRYWRR
Trigger: TCTTCGCCAGTATCTACTCCATGACGGCTGTGGCCT...ATCACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTCTGTCAAGCGTAGGCTaGGGTGATAGGAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPLSSVG*GDRSLQ
Trigger: CTGGAGGCTCCTATCACCCCAGCCTACGCTTGACAG...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTTTAGAGACAGGAAGCTaGCAAAGCCATGGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSLETGS*QSHGAG
Trigger: CCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCACATGGTCTTGTGGCCCCTaGAGAGCTCATGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ELCDDKLAAVPTCPSCLTWSCGP*RAHGVG
Trigger: CCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCA...TGTGAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp TCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTCACTGTGTATGTAGATaGTCTTGTGGCCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: STPGSHSWMVIISQAELCHCVCR*SCGPWR
Trigger: TCTCCAGGGGCCACAAGACCATCTACATACACAGTG...ACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
3UTR CAA 72 bp GCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATaGGAAACTGCCCGGACCACCCAACATTCCCTCTTA +
Preference number: 4 (lower is better)
Translates to: ACWHCPSRCFAI*ETARTTQHSLL
Trigger: TAAGAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 72 bp AGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTaGCCATATTGGAAACTGCCCGGACCACCCAACATT +
Preference number: 4 (lower is better)
Translates to: RGRLAGTVQADA*PYWKLPGPPNI
Trigger: AATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTGCTTCAGGAGACGTTTaGGTTCAGAAGTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSASGDV*VQKSGD
Trigger: GTCTCCAGACTTCTGAACTCAAACGTCTCCTGAAGC...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTGCCCGCGGTGGCTCTaGATTCCTCCACTTTCAAGC +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMCPRWL*IPPLSS
Trigger: GCTTGAAAGTGGAGGAATTCAGAGCCACCGCGGGCA...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTGGGCAGCACTCTTTTTaGAAGCTGAACTGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESGQHSF*KLNWRS
Trigger: TGAGCGCCAGTTCAGCTTTCAAAAAGAGTGCTGCCC...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATTTTGTGGGCTAAGATaGTCCACATCACTACCACGT +
Preference number: 4 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGFCGLR*STSLPR
Trigger: ACGTGGTAGTGATGTGGATCATCTTAGCCCACAAAA...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTGCTGGAGGGGATGTATaGTGGCCATGTACCTATCAA +
Preference number: 4 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSAGGDV*WPCTYQ
Trigger: TTGATAGGTACATGGCCATCATACATCCCCTCCAGC...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTGCAGAATTCATCCTaGAATGAGCACTCGCATGCA +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMLQNSS*NEHSHA
Trigger: TGCATGCGAGTGCTCATTTCAGGATGAATTCTGCAG...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTGCACCTGCTGCTGCCTaGAACTCCTATTTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESAPAAA*NSYFSF
Trigger: GAAGGAGAAATAGGAGTTGCAGGCAGCAGCAGGTGC...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGAAGAAGTTGTGGAACTTaGAGTAGAACAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGRSCGT*SRTGRS
Trigger: ACTACGGCCTGTTCTACTGCAAGTTCCACAACTTCT...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp CCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACCACCCAACATTCCCTCAGCAGATGGCGAAGGTaGACACCACGACAATCATCA +
Preference number: 4 (lower is better)
Translates to: PSRCFAILETARTTQHSLSRWRR*TPRQSS
Trigger: TGATGATTGTCGTGGTGTGCACCTTCGCCATCTGCT...GAGGGAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTTCAGTGGACATATTCTaGTTGCGTCGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESSVDIF*LRRLLR
Trigger: CCTGAGCAGCCGACGCAAGCAGAATATGTCCACTGA...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTCCCTCTTCCCAGAAGTaGAGCTGCAAAGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETPSSQK*SCKVQP
Trigger: AGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGG...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGAAAGTTCTGAGCCTATaGCCAGGATTCTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMKVLSL*PGFWSF
Trigger: GAAGCTCCAGAATCCTGGCCATAGGCTCAGAACTTT...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTAGCCAGACAGGAGGGTaGAAGGCTTTTTCTGGGCAG +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETSQTGG*KAFSGQ
Trigger: CTGCCCAGAAAAAGCCTTCCACCCTCCTGTCTGGCT...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTCTTCAGGTAGAGATCTaGGTTGATGTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHLSLLSHSWVYSFRMAALQVEI*VDVGQE
Trigger: CTCCTGCCCTACATCAACCCAGATCTCTACCTGAAG...AGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp TCAAGAGCTGCAGGGGCTGTGTGTTCCCAGTTCAGGGCAAAGTCCAGAGGAGGCTCAGTTCATGGCTCTTaGAAGACTGACTGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SRAAGAVCSQFRAKSRGGSVHGS*KTDCPL
Trigger: TAAAGGACAGTCAGTCTTCCAAGAGCCATGAACTGA...GCCTCCTCTGGACTTTGCCCTGAACTGGGAACACACAGCCCCTGCAGCTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTGTGGACATTGGAGACTaGGTCAGAGGAAGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLVDIGD*VRGRLA
Trigger: AGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCAC...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTTCCAGGAGACCAGGCTaGAAAACACGGAAACCTCAG +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESSRRPG*KTRKPQ
Trigger: CTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGA...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTAGTTCACCACTGTATTaGATGCAGCCATGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLSSPLY*MQPWRP
Trigger: AGGCCTCCATGGCTGCATTCAATACAGTGGTGAACT...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTTGCTGGAGGGGATGTATaGTGGCCATGTACCTATCAA +
Preference number: 4 (lower is better)
Translates to: PTCPSCLTAGFTHLGWPLAGGDV*WPCTYQ
Trigger: TTGATAGGTACATGGCCATCATACATCCCCTCCAGC...AAGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAAGCCAAAACCTTCCATaGGAAGGAATGTACTCAGGA +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPSQNLP*EGMYSG
Trigger: TCCTGAGTACATTCCTTCTCATGGAAGGTTTTGGCT...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTCACAAATCAGGCCAATaGGGTCAGTTCCTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPHKSGQ*GQFLSP
Trigger: GGGACTCAGGAACTGACCTCATTGGCCTGATTTGTG...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCGAAGTGGGGGCCCATTaGAGCGCGACCTGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: LVELEPAGLAKAVNHALFEVGAH*SATCKS
Trigger: ACTTTTACAGGTCGCGCTGCAATGGGCCCCCACTTC...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGGATCCCCCGCATTTATaGACCTGCTGCTGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWDPPHL*TCCCLQ
Trigger: TTGCAGGCAGCAGCAGGTGCATAAATGCGGGGGATC...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTACATCACTACCACGTTaGCCACCACAGAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPTSLPR*PPQRSP
Trigger: TGGTGACCTCTGTGGTGGGCAACGTGGTAGTGATGT...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GCTGAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCACATCACTACCACGTTaGCCACCACAGAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: AELCDDKLAAVPTCPSCLTSLPR*PPQRSP
Trigger: TGGTGACCTCTGTGGTGGGCAACGTGGTAGTGATGT...GAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR GCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGTGGATGCGGCACATGTaGATCCATTATGCAAACTAC +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMWMRHM*IHYANY
Trigger: GTAGTTTGCATAATGGATGCACATGTGCCGCATCCA...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCTGAAGGGTTGAGTTCAGAAGTCTaGAGACAGCATCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: RKLAKPWSREETFRESEGLSSEV*RQHLSC
Trigger: GCAAGAGAGATGCTGTCTCCAGACTTCTGAACTCAA...CCCTTCAGACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGATCTCTGTCATGGTCTTaGAGTCACTTCGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RLAGTVQADALPYWKLPGSLSWS*SHFVKS
Trigger: GCTCTTCACGAAGTGACTCCAAGACCATGACAGAGA...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCCAAAGTTCAGTGATTTaGTTTGAGTCACACAGCATG +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPQSSVI*FESHSM
Trigger: CATGCTGTGTGACTCAAACCAAATCACTGAACTTTG...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATCCAGGAGGACATTCATaGATGTTACATGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: NTGLQENESSGSAAVLQNPGGHS*MLHEAS
Trigger: AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGCACTGGCCCATAGTGTaGTTCCCACTACGGTGTATG +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMHWPIV*FPLRCM
Trigger: CATACACCGTAGTGGGAATCACACTATGGGCCAGTG...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGACTTCCAGAATGGAATaGATGGGCTTTTGGGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVTSRME*MGFWEK
Trigger: CTTTTCCCAAAAGCCCATTCATTCCATTCTGGAAGT...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCTACATTCTTCCAAAGTaGGTAATCCATACACAGCAA +
Preference number: 4 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPYILPK*VIHTQQ
Trigger: TTGCTGTGTATGGATTACTCACTTTGGAAGAATGTA...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGTCCCAGTCTTTGGCTTaGCTGCCCATGTTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWSQSLA*LPMLSV
Trigger: CACACTCAACATGGGCAGTCAAGCCAAAGACTGGGA...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTTTTTCCTTCTCTTTTaGTGCCGCTGCCGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFFFLLF*CRCRRL
Trigger: CAGGCGGCGGCAGCGGCAGCAAAAGAGAAGGAAAAA...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCCACCACTGTATTGAATaGAGCCATGGAGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFHHCIE*SHGGLR
Trigger: GCGGAGGCCTCCATGGCTGCATTCAATACAGTGGTG...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTTGCCATATTGGAAACTaGCCGGACCACCCAACATTC +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETCHIGN*PDHPTF
Trigger: GAATGTTGGGTGGTCCGGGCAGTTTCCAATATGGCA...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGCTATGGCCAGGATTCTaGAGCTTCGTATCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWLWPGF*SFVSSW
Trigger: CCAGCTGGATACGAAGCTCCAGAATCCTGGCCATAG...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGGACTTAGGAGCGAAGTaGGGGCCCATTGCAGCGCGA +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRDLGAK*GPIAAR
Trigger: TCGCGCTGCAATGGGCCCCCACTTCGCTCCTAAGTC...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GCTGAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCCTTGTTCGGATGCTCTaGCCATTCGATCATGCACAC +
Preference number: 4 (lower is better)
Translates to: AELCDDKLAAVPTCPSCLLVRML*PFDHAH
Trigger: GTGTGCATGATCGAATGGCCAGAGCATCCGAACAAG...GAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTTGTACACACTGCCCTaGGTCTGGAGATACCGGGTG +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFLYTLP*VWRYRV
Trigger: CACCCGGTATCTCCAGACCCAGGGCAGTGTGTACAA...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCAAGCTGGCAAAGCCATaGAGCAGGGAGGAGACATTC +
Preference number: 4 (lower is better)
Translates to: LVELEPAGLAKAVNHALFKLAKP*SREETF
Trigger: GAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTT...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGGCTGAGTTGTGTCTCTTGTCTCACAGCTaGGTTTACTCATTTAGGATG +
Preference number: 4 (lower is better)
Translates to: STPGSHSWMVIISQAELCLLSHS*VYSFRM
Trigger: CATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAG...ACACAACTCAGCCTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR TCA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGTTCAGTGATTTGGTTTaGGTCACACAGCATGAGGGT +
Preference number: 4 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQFSDLV*VTQHEG
Trigger: ACCCTCATGCTGTGTGACTCAAACCAAATCACTGAA...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATAATGTACTGAAATACTaGGATGCCAAAAAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: NTGLQENESSGSAAVLQNNVLKY*DAKKGN
Trigger: ATTCCCCTTTTTGGCATCTCAGTATTTCAGTACATT...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTCATTTATGCACCTGCTaGTGCCTGCAACTCCTATTT +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESHLCTC*CLQLLF
Trigger: AAATAGGAGTTGCAGGCAGCAGCAGGTGCATAAATG...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTAGACAGCATCTCTCTTaGGGTAAACTGAAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSRQHLS*GKLKKG
Trigger: TCCCTTTTTCAGTTTACCGCAAGAGAGATGCTGTCT...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCGCCCAAAGGACAATTTaGCAGGCTGGTTGCACGAAC +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFAQRTI*QAGCTN
Trigger: GTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGC...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TTAGAGACAGGAAGCTGGCAAAGCCATGGAGCAGGGAGGAGACATTCAGAGAGTAGAAGTTGTGGAACTTaGAGTAGAACAGGCCGTAGT +
Preference number: 4 (lower is better)
Translates to: LETGSWQSHGAGRRHSESRSCGT*SRTGRS
Trigger: ACTACGGCCTGTTCTACTGCAAGTTCCACAACTTCT...ACTCTCTGAATGTCTCCTCCCTGCTCCATGGCTTTGCCAGCTTCCTGTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCATCTGTCCTCTCAGATaGCTCCAAGACTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFICPLR*LQDCWA
Trigger: TGCCCAGCAGTCTTGGAGGCATCTGAGAGGACAGAT...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGACACTGTCCAAGCAGATaGTTTGCCATATTGGAAACT +
Preference number: 4 (lower is better)
Translates to: RLAGTVQADALPYWKLPGHCPSR*FAILET
Trigger: AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTG...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCACAGACAATTTGCCAGGCTaGTTGCACGAACTGATTGGG +
Preference number: 4 (lower is better)
Translates to: ELCDDKLAAVPTCPSCLTDNLPG*LHELIG
Trigger: CCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTC...TGTGAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp CCCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTGTCCTCATTCTTTTGTaGGCTAAGATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: PHLSLLSHSWVYSFRMAAVLILL*AKMIHI
Trigger: GATGTGGATCATCTTAGCCCACAAAAGAATGAGGAC...AGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTCTGGAGATACCGGGTaGATTTCATTTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMSGDTG*ISFPAP
Trigger: AGGGGCTGGAAATGAAATCCACCCGGTATCTCCAGA...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTACACTGCCCTGGGTCTaGAGATACCGGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLTLPWV*RYRVDF
Trigger: GAAATCCACCCGGTATCTCCAGACCCAGGGCAGTGT...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTCTTCTCTTCCATAGATaGGGTGTCCCCAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPLLFHR*GVPNFL
Trigger: CAAGAAGTTGGGGACACCCCATCTATGGAAGAGAAG...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 72 bp CATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTaGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTC +
Preference number: 4 (lower is better)
Translates to: HSRGSPKVPVFG*TAHVECGFLEF
Trigger: GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCAAAGCCCTGTGCTGCGTaGGGACTTAGGAGCGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESKPCAA*GLRSEV
Trigger: CACTTCGCTCCTAAGTCCTCACGCAGCACAGGGCTT...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCATGCAGGAGGCTAATCTaGGATAACTTTATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPCRRLI*DNFIEV
Trigger: TACTTCAATAAAGTTATCTCAGATTAGCCTCCTGCA...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTCCCCTTTCATGGATGTTACATaGAGCTTCTGCTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ELEPAGLAKAVNHALFSPFMDVT*SFCFQP
Trigger: TGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAA...AGGGGAGAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGAGAGAATGTAGTTCTTaGGGTTTTCTGGCTTATACT +
Preference number: 4 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVRECSS*GFLAYT
Trigger: AGTATAAGCCAGAAAACCTCAAGAACTACATTCTCT...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGTACTATGCACAGAGATaGTACTGTTCAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: WTLETGSEEGLLALSKQMYYAQR*YCSTKF
Trigger: GAATTTGGTTGAACAGTATCATCTCTGTGCATAGTA...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGTGGATAAACACAGGGTaGTGCATTTCTAGAATAAGA +
Preference number: 4 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVWINTG*CISRIR
Trigger: TCTTATTCTAGAAATGCATCACCCTGTGTTTATCCA...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCTTATGCACCTGCTGCTaGCTGCAACTCCTATTTCTC +
Preference number: 4 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASLCTCC*LQLLFL
Trigger: GAGAAATAGGAGTTGCAGGCAGCAGCAGGTGCATAA...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCCTTCAGGTAGAGATCTaGGTTGATGTAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFLQVEI*VDVGQE
Trigger: CTCCTGCCCTACATCAACCCAGATCTCTACCTGAAG...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CTTTTTGCAAGTCCCAGTGTGAGGGTGTTTCTGATGGTTCCAGATGAAGGGAATACCGGGGACATAATGTaGAAGCCCGAGGTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: LFASPSVRVFLMVPDEGNTGDIM*KPEVLN
Trigger: ATTGAGAACCTCGGGCTTCCACATTATGTCCCCGGT...ATTCCCTTCATCTGGAACCATCAGAAACACCCTCACACTGGGACTTGCAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTGATGCTTTGCCATATTaGAAACTGCCCGGACCACCC +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLDALPY*KLPGPP
Trigger: GGGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATC...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTTCTCTTGCGGTAAACTaGAAAAGGGAAAGAAATTCC +
Preference number: 4 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLSLAVN*KRERNS
Trigger: GGAATTTCTTTCCCTTTTTCAGTTTACCGCAAGAGA...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCTTTTGTGGGCTAAGATaGTCCACATCACTACCACGT +
Preference number: 4 (lower is better)
Translates to: LVELEPAGLAKAVNHALFFCGLR*STSLPR
Trigger: ACGTGGTAGTGATGTGGATCATCTTAGCCCACAAAA...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTATAAACGCTTCTGGATaGACTGCCCGCCTGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASINASG*TARLPA
Trigger: CGCGGGCAGGCGGGCAGTGCATCCAGAAGCGTTTAT...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTTTAGATGTTATGTGGTaGCTTCTTTTGTTCACCCTG +
Preference number: 4 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLLDVMW*LLLFTL
Trigger: CAGGGTGAACAAAAGAAGGCACCACATAACATCTAA...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGTGGACATATTCTGCTTaGGTCGGCTGCTCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRWTYSA*VGCSGQ
Trigger: CTGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCA...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTGATGGCCTTAGCAGTTaGTACATCTCCAGGAACTGG +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLDGLSS*YISRNW
Trigger: CCAGTTCCTGGAGATGTAGCAACTGCTAAGGCCATC...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTCCAAGCAGATGCTTTaGCATATTGGAAACTGCCCG +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFSKQML*HIGNCP
Trigger: CGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGA...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTGACAATTTGCCAGGCTaGTTGCACGAACTGATTGGG +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLDNLPG*LHELIG
Trigger: CCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTC...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTTGCACACGACTCTGCTaGGCATGGTCTCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASCTRLC*AWSLWL
Trigger: CAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCA...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTCTTGTTCGGATGCTCTaGCCATTCGATCATGCACAC +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLLVRML*PFDHAH
Trigger: GTGTGCATGATCGAATGGCCAGAGCATCCGAACAAG...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGAAAAACTGCCAGCTCCCTTTaGAAGTACCCCAGAGAACTC +
Preference number: 4 (lower is better)
Translates to: EDIHGCYMKLLLPAISGKTASSL*KYPREL
Trigger: GAGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGT...TTTTCCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAGGTGTTTCTTACATGTaGGAGTTGATGACATTTTTA +
Preference number: 4 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPGVSYM*ELMTFL
Trigger: TAAAAATGTCATCAACTCCCACATGTAAGAAACACC...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTGGTTGCACGAACTaGTTGGGTTCCGAGGTGTTA +
Preference number: 4 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASAGCTN*LGSEVL
Trigger: TAACACCTCGGAACCCAATCAGTTCGTGCAACCAGC...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGCTTGACTGCCCATGTTaGGTGTGGGTTTTTAGAATT +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWLDCPC*VWVFRI
Trigger: AATTCTAAAAACCCACACTCAACATGGGCAGTCAAG...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTTTAGGTCCCCTGGACTaGCTGCCAGCTCCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASLGPLD*LPAPFG
Trigger: TCCAAAGGGAGCTGGCAGTCAGTCCAGGGGACCTAA...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTGGCATGAAGTCCTCTaGTCTGTCAAAAGCCAAAAC +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFWHEVL*SVKSQN
Trigger: GTTTTGGCTTTTGACAGAGCAGAGGACTTCATGCCA...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGCTAAAGCTGGATGGATaGAGGCCTTGGCATGAAGTC +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRLKLDG*RPWHEV
Trigger: GACTTCATGCCAAGGCCTGCATCCATCCAGCTTTAG...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCTCTCTGACAGTGTTCTaGAGCTATGAAATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASSLTVF*SYEILP
Trigger: AGGCAGAATTTCATAGCTGCAGAACACTGTCAGAGA...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTAGTGCAGCTGCAAAGTaGAGCCTTCTTGCTTGTCGC +
Preference number: 4 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASSAAAK*SLLACR
Trigger: GCGACAAGCAAGAAGGCTGCACTTTGCAGCTGCACT...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGCATGTGCATCCATTATaGAAACTACCAGGAGGACAT +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMHVHPL*KLPGGH
Trigger: ATGTCCTCCTGGTAGTTTGCATAATGGATGCACATG...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTAGGCCACAGCCGTCATaGAGTAGATACTGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASRPQPS*SRYWRR
Trigger: TCTTCGCCAGTATCTACTCCATGACGGCTGTGGCCT...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCACTAGCAGGTATCAGTaGACATATTCTGCTTGCGTC +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFTSRYQ*TYSACV
Trigger: GACGCAAGCAGAATATGTCCACTGATACCTGCTAGT...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCAGATGGATGCAGGCCTTaGCATGAAGTCCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESDGCRP*HEVLCS
Trigger: AGAGCAGAGGACTTCATGCCAAGGCCTGCATCCATC...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTCTCCCCTTAATGTTATaGATGCGGCACATGTGCATC +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLLPLML*MRHMCI
Trigger: GATGCACATGTGCCGCATCCATAACATTAAGGGGAG...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGTGGCTCTTGGAAGACTaGCTGTCCTTTAGGGTTGAT +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRWLLED*LSFRVD
Trigger: ATCAACCCTAAAGGACAGTCAGTCTTCCAAGAGCCA...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCAAGTCTGAAGGGAAGATaGAAGATGCCCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESSLKGR*KMPSSQ
Trigger: CTGGGAAGAGGGCATCTTGCATCTTCCCTTCAGACT...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp AGAGATGATACTGTTCAACCAAATTCCTTTAGGTCCCCTGGACTGACTGCCAGCAGCTTCGTATCCAGCTaGAGATTTTTCCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: RDDTVQPNSFRSPGLTASSFVSS*RFFLLF
Trigger: AAAGAGAAGGAAAAATCTCCAGCTGGATACGAAGCT...GCTGGCAGTCAGTCCAGGGGACCTAAAGGAATTTGGTTGAACAGTATCATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CTTTTTGCAAGTCCCAGTGTGAGGGTGTTTCTGATGGTTCCAGATGAAGGGAATGGAGAATGTCTGAGATaGATAGTTACAGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LFASPSVRVFLMVPDEGNGECLR*IVTDGL
Trigger: AAGGCCATCTGTAACTATCCATCTCAGACATTCTCC...ATTCCCTTCATCTGGAACCATCAGAAACACCCTCACACTGGGACTTGCAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGTTTTTAGAATTCTGTaGAGAATCTGTCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: QRKACWHCPSRCFAILETVFRIL*RICPLR
Trigger: TCTGAGAGGACAGATTCTCCACAGAATTCTAAAAAC...AGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGGCACAGTACAAATCATaGTGTTTCTTACATGTGGGA +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWAQYKS*CFLHVG
Trigger: TCCCACATGTAAGAAACACCATGATTTGTACTGTGC...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCAGAATTCATCCTGAAATaGGCACTCGCATGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESEFILK*ALACSQ
Trigger: TTGGCTGCATGCGAGTGCTCATTTCAGGATGAATTC...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCCATTCCCTCTTACTATaGACAGAGATGATACTGTTC +
Preference number: 4 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFHSLLL*TEMILF
Trigger: GAACAGTATCATCTCTGTGCATAGTAAGAGGGAATG...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTGTGGAAGGCTTTTTCTaGGCAGCACTCTTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLVEGFF*AALFLK
Trigger: TTTCAAAAAGAGTGCTGCCCAGAAAAAGCCTTCCAC...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTTTTGACTCAAGGATaGAATGTTTTCCCTAACCCA +
Preference number: 4 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMFLTQG*NVFPNP
Trigger: TGGGTTAGGGAAAACATTCCATCCTTGAGTCAAAAA...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTAAGTCACTTCCAGAATaGAATGAATGGGCTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PNSWSVRELAGISGHILLKSLPE*NEWAFG
Trigger: CCCAAAAGCCCATTCATTCCATTCTGGAAGTGACTT...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTCGACAATCATCATTTTaGCCACCTTGCGCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASRQSSF*PPCAWQ
Trigger: CTGCCAAGCGCAAGGTGGTCAAAATGATGATTGTCG...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGACTGAAATACTGAGATaGCAAAAAGGGGAATACATA +
Preference number: 4 (lower is better)
Translates to: PGGHSWMLHEASASSHIWTEILR*QKGEYI
Trigger: TATGTATTCCCCTTTTTGGCATCTCAGTATTTCAGT...CCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTAGGGAAGATGCAAGATaGCCTCTTCCCAGAAGTGCA +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASREDAR*PLPRSA
Trigger: TGCACTTCTGGGAAGAGGGCATCTTGCATCTTCCCT...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACCAGAATGGAATGAATaGGCTTTTGGGAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESPEWNE*AFGKSW
Trigger: CCAGCTTTTCCCAAAAGCCCATTCATTCCATTCTGG...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTCTCTTAGTGTCCTGTTaGGGGATAAGGAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASLLVSC*GIRRRR
Trigger: CCTTCTCCTCCTTATCCCCCAACAGGACACTAAGAG...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTGGAACTGTGAGTTCATaGTATACATCAGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASGTVSS*YTSGLL
Trigger: GAGGAGCCCTGATGTATATCATGAACTCACAGTTCC...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GTCCGACCTTTTATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCAAAGTCTCCCAATTCCTaGTCTGTAAGAGAACTAGCA +
Preference number: 4 (lower is better)
Translates to: VRPFILQAQQSSVIWFESKSPNS*SVRELA
Trigger: TGCTAGTTCTCTTACAGACCAGGAATTGGGAGACTT...TGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAATAAAAGGTCGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp GAGGACATTCATGGATGTTACATGAAGCTTCTGCTTCCAGCCATATCTGGAAAATACATCTCCAGGAACTaGGTATTAGTTACAAGACTC +
Preference number: 4 (lower is better)
Translates to: EDIHGCYMKLLLPAISGKYISRN*VLVTRL
Trigger: GAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTA...TTTTCCAGATATGGCTGGAAGCAGAAGCTTCATGTAACATCCATGAATGTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTACTCTTTTTGAAAGCTaGACTGGCGCTCAGAATATA +
Preference number: 4 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASTLFES*TGAQNI
Trigger: TATATTCTGAGCGCCAGTTCAGCTTTCAAAAAGAGT...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR TCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTTCTGATGGTTCCAGATaGAGGGAATTTCCATGCATG +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASSDGSR*REFPCM
Trigger: CATGCATGGAAATTCCCTTCATCTGGAACCATCAGA...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp CAGTTGCTACATCTCCAGGAACTGGGTATTAGTTACAAGACTCACTGCTCCTATAGTTACAAGACTCACTaGTCCTATTCTTTTCTATTC +
Preference number: 4 (lower is better)
Translates to: QLLHLQELGISYKTHCSYSYKTH*SYSFLF
Trigger: GAATAGAAAAGAATAGGAGCAGTGAGTCTTGTAACT...ATAGGAGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR GCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGAAAGGCTGTAAACCATaGATTATTCTCCCCTTAATG +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRKGCKP*IILPLM
Trigger: CATTAAGGGGAGAATAATGCATGGTTTACAGCCTTT...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGCATTTAGATGTTATGTaGTGCCTTCTTTTGTTCACC +
Preference number: 4 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRHLDVM*CLLLFT
Trigger: GGTGAACAAAAGAAGGCACCACATAACATCTAAATG...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CCA 90 bp CCTTGTTTACAAGTAGGAAAAGAGGGTCAACTACACATTAAATGTAGTGCAAGTGTCCTCATTCTTTTGTaGGCTAAGATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: PCLQVGKEGQLHIKCSASVLILL*AKMIHI
Trigger: GATGTGGATCATCTTAGCCCACAAAAGAATGAGGAC...ACTTGCACTACATTTAATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
3UTR CAA 72 bp TTCGAAGGAACACTTAGATTATCTAGTTCAGTCCCCTaGTTTACAAGTAGGAAAAGAGGGTCAACTACACAT +
Preference number: 4 (lower is better)
Translates to: FEGTLRLSSSVP*FTSRKRGSTTH
Trigger: ATGTGTAGTTGACCCTCTTTTCCTACTTGTAAACAAGGGGACTGAACTAGATAATCTAAGTGTTCCTTCGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp GGAGGTCAGGTCCAGGGACGAGGGTGTGGCCTTGGGGCCGTCCTCTaGCTCCTCCTCGTGGGCCCCCACCACTGTGGAGATGGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: GGQVQGRGCGLGAVL*LLLVGPHHCGDGGL
Trigger: GAGACCACCATCTCCACAGTGGTGGGGGCCCACGAGGAGGAGCCAGAGGACGGCCCCAAGGCCACACCCTCGTCCCTGGACCTGACCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp GTGAAGAGCAGTTGGAGGTCAGGTCCAGGGACGAGGGTGTGGCCTTaGGGCCGTCCTCTGGCTCCTCCTCGTGGGCCCCCACCACTGTGG +
Preference number: 5 (lower is better)
Translates to: VKSSWRSGPGTRVWP*GRPLAPPRGPPPLW
Trigger: CCACAGTGGTGGGGGCCCACGAGGAGGAGCCAGAGGACGGCCCCAAGGCCACACCCTCGTCCCTGGACCTGACCTCCAACTGCTCTTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp CTATTTCTCCTTCCTCCGCAGGGAAAGGCAAAGCCCTGTGCTGCGTaGGGACTTAGGAGCGAAGTGGGGGCCCATTGCAGCGCGACCTGT +
Preference number: 5 (lower is better)
Translates to: LFLLPPQGKAKPCAA*GLRSEVGAHCSATC
Trigger: ACAGGTCGCGCTGCAATGGGCCCCCACTTCGCTCCTAAGTCCTCACGCAGCACAGGGCTTTGCCTTTCCCTGCGGAGGAAGGAGAAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp TCCATGCATGAAGGGAGGCAGGTCAAAGGCAGTGGGGGCTGCACCTaGCAAAGGCCCTGTGGCCTAGGAGAGCACATTGGAGGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: SMHEGRQVKGSGGCT*QRPCGLGEHIGGEA
Trigger: AGCTTCTCCTCCAATGTGCTCTCCTAGGCCACAGGGCCTTTGGCAGGTGCAGCCCCCACTGCCTTTGACCTGCCTCCCTTCATGCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp AGCTTCGTATCCAGCTGGAGATTTTTCCTTCTCTTTTGCTGCCGCTaGCGCCGCCTGCAGTTTCGCGGGCACCTCTCGGTTCGGGTTGCT +
Preference number: 5 (lower is better)
Translates to: SFVSSWRFFLLFCCR*RRLQFRGHLSVRVA
Trigger: AGCAACCCGAACCGAGAGGTGCCCGCGAAACTGCAGGCGGCGGCAGCGGCAGCAAAAGAGAAGGAAAAATCTCCAGCTGGATACGAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp TTCTGGAGCTTCGTATCCAGCTGGAGATTTTTCCTTCTCTTTTGCTaGCGCTGCCGCCGCCTGCAGTTTCGCGGGCACCTCTCGGTTCGG +
Preference number: 5 (lower is better)
Translates to: FWSFVSSWRFFLLFC*RCRRLQFRGHLSVR
Trigger: CCGAACCGAGAGGTGCCCGCGAAACTGCAGGCGGCGGCAGCGGCAGCAAAAGAGAAGGAAAAATCTCCAGCTGGATACGAAGCTCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp TCGGATGCTCTGGCCATTCGATCATGCACACGACTCTGCTGGGCATaGTCTCTGTGGTTGAGTAGTAGCCCTGGGGGAAGGCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: SDALAIRSCTRLCWA*SLWLSSSPGGRPAG
Trigger: TCCTGCTGGCCTTCCCCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS-3UTR CAA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGAGCATGGTCTCTGTGGTaGAGTAGTAGCCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGAWSLW*SSSPGG
Trigger: TCCCCCAGGGCTACTACTCAACCACAGAGACCATGC...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCGACTGCCAGCTCCCTTaGGAAGTACCCCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPDCQLP*EVPQRT
Trigger: AGTTCTCTGGGGTACTTCCAAAGGGAGCTGGCAGTC...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp GGAGGAGAAGCTGAAGCTCTCTGTCATGGTCTTGGAGTCACTTCGTaGAGAGCAGTTGGAGGTCAGGTCCAGGGACGAGGGTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: GGEAEALCHGLGVTS*RAVGGQVQGRGCGL
Trigger: AAGGCCACACCCTCGTCCCTGGACCTGACCTCCAACTGCTCTTCACGAAGTGACTCCAAGACCATGACAGAGAGCTTCAGCTTCTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp CACGTTGCCCACCACAGAGGTCACCACAATGACCGTGTAGGCAGCTaGCCAAAGGACAATTTGCCAGGCTGGTTGCACGAACTGATTGGG +
Preference number: 5 (lower is better)
Translates to: HVAHHRGHHNDRVGS*PKDNLPGWLHELIG
Trigger: CCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATTGTGGTGACCTCTGTGGTGGGCAACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CCA 90 bp TCTTGTTCGGATGCTCTGGCCATTCGATCATGCACACGACTCTGCTaGGCATGGTCTCTGTGGTTGAGTAGTAGCCCTGGGGGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: SCSDALAIRSCTRLC*AWSLWLSSSPGGRP
Trigger: TGGCCTTCCCCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS-3UTR CAA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGATCCAGGCGGCTGACTTaGTACACACTGCCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: RLAGTVQADALPYWKLPGSRRLT*YTLPWV
Trigger: GACCCAGGGCAGTGTGTACAAAGTCAGCCGCCTGGA...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp GGGTTTACTCATTTAGGATGGCCGCTTGGCCACTGTGTATGTAGATaGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCCTCACC +
Preference number: 5 (lower is better)
Translates to: GFTHLGWPLGHCVCR*SCGPWRAHGVGILT
Trigger: GGTGAGGATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAGCGGCCATCCTAAATGAGTAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp CACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGATCACACAGATGACCACTTaGGTGGCTGTGGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: HCVCRWSCGPWRAHGVGITQMTT*VAVADS
Trigger: GCTGTCAGCCACAGCCACCAAAGTGGTCATCTGTGT...GATCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp AACACGGGGCTCCAGGAAAATGAGTCTTCCGGGTCCGCAGCTGTGCTGCAGAATGCAGGGAGCCCACATTaGTCTTCTCTGACAGTGTTC +
Preference number: 5 (lower is better)
Translates to: NTGLQENESSGSAAVLQNAGSPH*SSLTVF
Trigger: GAACACTGTCAGAGAAGACAAATGTGGGCTCCCTGC...ATTCTGCAGCACAGCTGCGGACCCGGAAGACTCATTTTCCTGGAGCCCCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCCAAAGTGCAGCCTTCTaGCTTGTCGCACATATGAGC +
Preference number: 5 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPQSAAF*LVAHMS
Trigger: GCTCATATGTGCGACAAGCAAGAAGGCTGCACTTTG...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp TTCTGCTTGCGTCGGCTGCTCAGGACAGTCACCGGGGACATAATGTGGAAGCCCGTCCAAGCAGATGCTTaGCCATATTGGAAACTGCCC +
Preference number: 5 (lower is better)
Translates to: FCLRRLLRTVTGDIMWKPVQADA*PYWKLP
Trigger: GGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGAC...GGGCTTCCACATTATGTCCCCGGTGACTGTCCTGAGCAGCCGACGCAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp CTGCCAAAGGCCCTGTGGCCTAGGAGAGCACATTGGAGGAGAAGCTaGAGCTCTCTGTCATGGTCTTGGAGTCACTTCGTGAAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: LPKALWPRRAHWRRS*SSLSWSWSHFVKSS
Trigger: ACTGCTCTTCACGAAGTGACTCCAAGACCATGACAGAGAGCTTCAGCTTCTCCTCCAATGTGCTCTCCTAGGCCACAGGGCCTTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp TCTAGGAAGCAAGAGATCCCCCGCATTTATGCACCTGCTGCTGCCTaGAACTCCTATTTCTCCTTCCTCCGCAGGGAAAGGCAAAGCCCT +
Preference number: 5 (lower is better)
Translates to: SRKQEIPRIYAPAAA*NSYFSFLRRERQSP
Trigger: AGGGCTTTGCCTTTCCCTGCGGAGGAAGGAGAAATAGGAGTTGCAGGCAGCAGCAGGTGCATAAATGCGGGGGATCTCTTGCTTCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp AAATCTTGTTCGGATGCTCTGGCCATTCGATCATGCACACGACTCTaGTGGGCATGGTCTCTGTGGTTGAGTAGTAGCCCTGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KSCSDALAIRSCTRL*WAWSLWLSSSPGGR
Trigger: CCTTCCCCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS-3UTR CAA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGTGGGCAGCACTCTTTTaGAAAGCTGAACTGGCGCTC +
Preference number: 5 (lower is better)
Translates to: WTLETGSEEGLLALSKQMWAALF*KAELAL
Trigger: GAGCGCCAGTTCAGCTTTCAAAAAGAGTGCTGCCCA...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp GCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTGGGAAATTTGCCAGGCTGGTaGCACGAACTGATTGGGTTC +
Preference number: 5 (lower is better)
Translates to: ATVYVDGLVAPGELMGLGNLPGW*HELIGF
Trigger: GAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATT...TCCCAACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp TACCCCAGAGAACTCTCATTCCAGAGGCTCTCCAAAGGTCCCAGTCTTTGGCTTCACATCACTACCACGTaGCCCACCACAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: YPRELSFQRLSKGPSLWLHITTT*PTTEVT
Trigger: GGTGACCTCTGTGGTGGGCAACGTGGTAGTGATGTG...AAGCCAAAGACTGGGACCTTTGGAGAGCCTCTGGAATGAGAGTTCTCTGGGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CCCACTTGTCCCTCTTGTCTCACAGCTGGGTTTACTCATTTAGGATGGCCGCTTTTGACCACCTTGCGCTaGGCAGAGACTTGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: PTCPSCLTAGFTHLGWPLLTTLR*AETCSW
Trigger: CCACGAGCAAGTCTCTGCCAAGCGCAAGGTGGTCAA...AAGCGGCCATCCTAAATGAGTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp TGGCCGCTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATATCATTTTGACCACCTaGCGCTTGGCAGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: WPLGHCVCRWSCGPWRAHIILTT*RLAETC
Trigger: GCAAGTCTCTGCCAAGCGCAAGGTGGTCAAAATGAT...ATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAGCGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp TGGACATTGGAGACTGGGTCAGAGGAAGGCTTGCTGGCACTGTCCAAGCAGATGGTCCCAGTCTTTGGCTaGACTGCCCATGTTGAGTGT +
Preference number: 5 (lower is better)
Translates to: WTLETGSEEGLLALSKQMVPVFG*TAHVEC
Trigger: ACACTCAACATGGGCAGTCAAGCCAAAGACTGGGAC...CATCTGCTTGGACAGTGCCAGCAAGCCTTCCTCTGACCCAGTCTCCAATGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp TCCTCTCAGATGCCTCCAAGACTGCTGGGCAGCTTAGACTCACTAGGACTGGTGAGATGCTTTGCCATATaGGAAACTGCCCGGACCACC +
Preference number: 5 (lower is better)
Translates to: SSQMPPRLLGSLDSLGLVRCFAI*ETARTT
Trigger: GGTGGTCCGGGCAGTTTCCAATATGGCAAAGCATCT...CACCAGTCCTAGTGAGTCTAAGCTGCCCAGCAGTCTTGGAGGCATCTGAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCCACCGGAAGGCATGCTaGAAGCCCAGACGGAACCTG +
Preference number: 5 (lower is better)
Translates to: LVELEPAGLAKAVNHALFHRKAC*KPRRNL
Trigger: CAGGTTCCGTCTGGGCTTCAAGCATGCCTTCCGGTG...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp CAGGAGGGTGGAAGGCTTTTTCTGGGCAGCACTCTTTTTGAAAGCTaGACTGGCGCTCAGAATATAAACGCTTCTGGATGCACTGCCCGC +
Preference number: 5 (lower is better)
Translates to: QEGGRLFLGSTLFES*TGAQNINASGCTAR
Trigger: GCGGGCAGTGCATCCAGAAGCGTTTATATTCTGAGCGCCAGTTCAGCTTTCAAAAAGAGTGCTGCCCAGAAAAAGCCTTCCACCCTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp CACAATGACCGTGTAGGCAGCTGCCCAAAGGACAATTTGCCAGGCTaGTTGCACGAACTGATTGGGTTCCGAGGTGTTAGTGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: HNDRVGSCPKDNLPG*LHELIGFRGVSGDV
Trigger: AACATCTCCACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS-3UTR CAA 90 bp TTTCCAGGAGACCAGGCTGGAAAACACGGAAACCTCAGGAATGGCCCCTCTCCAAGCTTCAGGAGACGTTaGAGTTCAGAAGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: FPGDQAGKHGNLRNGPSPSFRRR*SSEVWR
Trigger: TCTCCAGACTTCTGAACTCAAACGTCTCCTGAAGCT...TGGAGAGGGGCCATTCCTGAGGTTTCCGTGTTTTCCAGCCTGGTCTCCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp AGGCTTGCTGGCACTGTCCAAGCAGATGCTTTGCCATATTGGAAACTGCCCGGAAATTTGCCAGGCTGGTaGCACGAACTGATTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RLAGTVQADALPYWKLPGNLPGW*HELIGF
Trigger: GAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATT...TCCGGGCAGTTTCCAATATGGCAAAGCATCTGCTTGGACAGTGCCAGCAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CTTGGCCACTGTGTATGTAGATGGTCTTGTGGCCCCTGGAGAGCTCATGGGGTTACGACAATCATCATTTaGACCACCTTGCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: LGHCVCRWSCGPWRAHGVTTIII*TTLRLA
Trigger: TGCCAAGCGCAAGGTGGTCAAAATGATGATTGTCGT...AACCCCATGAGCTCTCCAGGGGCCACAAGACCATCTACATACACAGTGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp GGAAGATGCAAGATGCCCTCTTCCCAGAAGTGCAGCTGCAAAGTGCAGCCTTCTTCTCTTAGTGTCCTGTaGGGGGATAAGGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GRCKMPSSQKCSCKVQPSSLSVL*GDKEEK
Trigger: CTTCTCCTCCTTATCCCCCAACAGGACACTAAGAGA...AGAAGGCTGCACTTTGCAGCTGCACTTCTGGGAAGAGGGCATCTTGCATCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp GCTGAGTTGTGTGATGATAAGTTAGCTGCAGTCCCCACTTGTCCCTCTTGTCTCGGAGAGCTCATGGGGTaGGGATCCTCACCTGTCATT +
Preference number: 5 (lower is better)
Translates to: AELCDDKLAAVPTCPSCLGELMG*GSSPVI
Trigger: AATGACAGGTGAGGATCCCAACCCCATGAGCTCTCC...GAGACAAGAGGGACAAGTGGGGACTGCAGCTAACTTATCATCACACAACTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp AAAGAAAATCAGTCCACTCCGGGCTCCCATTCCTGGATGGTGATAATCAGCCAGCCCCACTTGTCCCTCTaGTCTCACAGCTGGGTTTAC +
Preference number: 5 (lower is better)
Translates to: KENQSTPGSHSWMVIISQPHLSL*SHSWVY
Trigger: GTAAACCCAGCTGTGAGACAAGAGGGACAAGTGGGG...CTGGCTGATTATCACCATCCAGGAATGGGAGCCCGGAGTGGACTGATTTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409848.3
CDS-3UTR CAA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCTTGACCACCTTGCGCTaGGCAGAGACTTGCTCGTGG +
Preference number: 5 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFLTTLR*AETCSW
Trigger: CCACGAGCAAGTCTCTGCCAAGCGCAAGGTGGTCAA...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CGGAAACCTCAGGAATGGCCCCTCTCCACTTATACTCCTCTCCTCACAAATCAGGGAGGAGAAGGACTCTaGTTCTCTAGCTTCTCCGAT +
Preference number: 5 (lower is better)
Translates to: RKPQEWPLSTYTPLLTNQGGEGL*FSSFSD
Trigger: ATCGGAGAAGCTAGAGAACAAGAGTCCTTCTCCTCC...CTGATTTGTGAGGAGAGGAGTATAAGTGGAGAGGGGCCATTCCTGAGGTTTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp AGCCAGACAGGAGGGTGGAAGGCTTTTTCTGGGCAGCACTCTTTTTaGAAGCTGAACTGGCGCTCAGAATATAAACGCTTCTGGATGCAC +
Preference number: 5 (lower is better)
Translates to: SQTGGWKAFSGQHSF*KLNWRSEYKRFWMH
Trigger: GTGCATCCAGAAGCGTTTATATTCTGAGCGCCAGTTCAGCTTTCAAAAAGAGTGCTGCCCAGAAAAAGCCTTCCACCCTCCTGTCTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp AAGGTCCCAGTCTTTGGCTTGACTGCCCATGTTGAGTGTGGGTTTTTAGAATTCACACAGATGACCACTTaGGTGGCTGTGGCTGACAGC +
Preference number: 5 (lower is better)
Translates to: KVPVFGLTAHVECGFLEFTQMTT*VAVADS
Trigger: GCTGTCAGCCACAGCCACCAAAGTGGTCATCTGTGT...GAATTCTAAAAACCCACACTCAACATGGGCAGTCAAGCCAAAGACTGGGACCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CAGTTGCTACATCTCCAGGAACTGGGTATTAGTTACAAGACTCACTGCTCCTATGCATGGTCTCTGTGGTaGAGTAGTAGCCCTGGGGGA +
Preference number: 5 (lower is better)
Translates to: QLLHLQELGISYKTHCSYAWSLW*SSSPGG
Trigger: TCCCCCAGGGCTACTACTCAACCACAGAGACCATGC...ATAGGAGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 90 bp ACACTTTCTCATAAATCTTGTTCGGATGCTCTGGCCATTCGATCATaGACACGACTCTGCTGGGCATGGTCTCTGTGGTTGAGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: TLSHKSCSDALAIRS*TRLCWAWSLWLSSS
Trigger: GCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CCA 90 bp CACACAGATGTGGTACACTTTCTCATAAATCTTGTTCGGATGCTCTaGCCATTCGATCATGCACACGACTCTGCTGGGCATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: HTDVVHFLINLVRML*PFDHAHDSAGHGLC
Trigger: ACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTGTACCACATCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS-3UTR CAA 90 bp CTGGTAGAATTAGAGCCAGCAGGGCTGGCAAAGGCTGTAAACCATGCATTATTCCTCTCTGTCATGGTCTaGGAGTCACTTCGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: LVELEPAGLAKAVNHALFLSVMV*ESLREE
Trigger: CTCTTCACGAAGTGACTCCAAGACCATGACAGAGAG...GAATAATGCATGGTTTACAGCCTTTGCCAGCCCTGCTGGCTCTAATTCTACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CAGTTGCTACATCTCCAGGAACTGGGTATTAGTTACAAGACTCACTGCTCCTATGTGGACATATTCTGCTaGCGTCGGCTGCTCAGGACA +
Preference number: 5 (lower is better)
Translates to: QLLHLQELGISYKTHCSYVDIFC*RRLLRT
Trigger: TGTCCTGAGCAGCCGACGCAAGCAGAATATGTCCAC...ATAGGAGCAGTGAGTCTTGTAACTAATACCCAGTTCCTGGAGATGTAGCAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 90 bp CCAGAAAATAGTTCGTCACTGTCCTCATTCTTTTGTGGGCTAAGATaGTCCACATCACTACCACGTTGCCCACCACAGAGGTCACCACAA +
Preference number: 5 (lower is better)
Translates to: PENSSSLSSFFCGLR*STSLPRCPPQRSPQ
Trigger: TTGTGGTGACCTCTGTGGTGGGCAACGTGGTAGTGATGTGGATCATCTTAGCCCACAAAAGAATGAGGACAGTGACGAACTATTTTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS GCA 90 bp ATACTTTCTCATAAATCTTGTTCGGATGCTCTGGCCATTCGATCATaGACACGACTCTGCTGGGCATGGTCTCTGTGGTTGAGTAGTAGC +
Preference number: 5 (lower is better)
Translates to: ILSHKSCSDALAIRS*TRLCWAWSLWLSSS
Trigger: GCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497764.1
CDS CCA 90 bp CTTTTGAGGAAACCTTCTGGCTTGAACATGTTCACAGGTTCTGTATaGCTTGTAAAGCTGTGTTCTTTCTCCCGCTGGGACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: LLRKPSGLNMFTGSV*LVKLCSFSRWDLAQ
Trigger: CTGAGCAAGGTCCCAGCGGGAGAAAGAACACAGCTTTACAAGCCATACAGAACCTGTGAACATGTTCAAGCCAGAAGGTTTCCTCAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497764.1
CDS-3UTR CAA 90 bp GATGCGGCACATGTGCATCCATTATGCAAACTACCAGGAGGACATTCATGGATGGATTCCACTCAGTCCTaGTCTCTTAGTGTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: DAAHVHPLCKLPGGHSWMDSTQS*SLSVLL
Trigger: CAACAGGACACTAAGAGACAAGGACTGAGTGGAATC...CATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATGCACATGTGCCGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp AGGCTTGTAGTTTCATACTTTCTCATAAATCTTGTTCGGATGCTCTaGCCATTCGATCATGCACACGACTCTGCTGGGCATGGTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RLVVSYFLINLVRML*PFDHAHDSAGHGLC
Trigger: ACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTATGAAACTACAAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497764.1
CDS-3UTR CAA 90 bp ATTTTACAGGCTCAGCAAAGTTCAGTGATTTGGTTTGAGTCACACAGCATGAGGATCATTTTGACCACCTaGCGCTTGGCAGAGACTTGC +
Preference number: 5 (lower is better)
Translates to: ILQAQQSSVIWFESHSMRIILTT*RLAETC
Trigger: GCAAGTCTCTGCCAAGCGCAAGGTGGTCAAAATGAT...CCTCATGCTGTGTGACTCAAACCAAATCACTGAACTTTGCTGAGCCTGTAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGGAATGAATGGGCTTTaGGGAAAAGCTGGTCCGACC +
Preference number: 5 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASGMNGL*GKAGPT
Trigger: GGTCGGACCAGCTTTTCCCAAAAGCCCATTCATTCC...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTATGTGGTGCCTTCTTTaGTTCACCCTGTCAAGCGTA +
Preference number: 5 (lower is better)
Translates to: PNSWSVRELAGISGHILLMWCLL*FTLSSV
Trigger: TACGCTTGACAGGGTGAACAAAAGAAGGCACCACAT...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 90 bp ATTCCTCCACTTTCAAGCTTCAGGAGACGTTTGAGTTCAGAAGTCTaGAGACAGCATCTCTCTTGCGGTAAACTGAAAAAGGGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: IPPLSSFRRRLSSEV*RQHLSCGKLKKGKK
Trigger: TTTCTTTCCCTTTTTCAGTTTACCGCAAGAGAGATGCTGTCTCCAGACTTCTGAACTCAAACGTCTCCTGAAGCTTGAAAGTGGAGGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTACGACAATCATCATTTaGACCACCTTGCGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASTTIII*TTLRLA
Trigger: TGCCAAGCGCAAGGTGGTCAAAATGATGATTGTCGT...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CATCCATTATGCAAACTACCAGGAGGACATTCATGGATGTTACATGAAGCTTCTGACTGTCCTTTAGGGTaGATGAGTCATTCTACCCCT +
Preference number: 5 (lower is better)
Translates to: HPLCKLPGGHSWMLHEASDCPLG*MSHSTP
Trigger: AGGGGTAGAATGACTCATCAACCCTAAAGGACAGTC...AGAAGCTTCATGTAACATCCATGAATGTCCTCCTGGTAGTTTGCATAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS-3UTR CAA 90 bp CCCAATTCCTGGTCTGTAAGAGAACTAGCAGGTATCAGTGGACATATTCTGCTTTCTAGTTCAGTCCCCTaGTTTACAAGTAGGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PNSWSVRELAGISGHILLSSSVP*FTSRKR
Trigger: TCTTTTCCTACTTGTAAACAAGGGGACTGAACTAGA...AAGCAGAATATGTCCACTGATACCTGCTAGTTCTCTTACAGACCAGGAATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 72 bp CTTCCTCCGCAGGGAAAGGCAAAGCCCTGTGCTGCGTaGGGACTTAGGAGCGAAGTGGGGGCCCATTGCAGC +
Preference number: 6 (lower is better)
Translates to: LPPQGKAKPCAA*GLRSEVGAHCS
Trigger: GCTGCAATGGGCCCCCACTTCGCTCCTAAGTCCTCACGCAGCACAGGGCTTTGCCTTTCCCTGCGGAGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 72 bp GAAGGGAGGCAGGTCAAAGGCAGTGGGGGCTGCACCTaGCAAAGGCCCTGTGGCCTAGGAGAGCACATTGGA +
Preference number: 6 (lower is better)
Translates to: EGRQVKGSGGCT*QRPCGLGEHIG
Trigger: TCCAATGTGCTCTCCTAGGCCACAGGGCCTTTGGCAGGTGCAGCCCCCACTGCCTTTGACCTGCCTCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CAA 72 bp CCGGCGCTGATGAAGGGGCAGCACCGGAAGGCATGCTaGAAGCCCAGACGGAACCTGTCATTGAGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: PALMKGQHRKAC*KPRRNLSLRQQ
Trigger: CTGCTGCCTCAATGACAGGTTCCGTCTGGGCTTCAAGCATGCCTTCCGGTGCTGCCCCTTCATCAGCGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CAA 90 bp CTGAAGCTCTCTGTCATGGTCTTGGAGTCACTTCGTGAAGAGCAGTaGGAGGTCAGGTCCAGGGACGAGGGTGTGGCCTTGGGGCCGTCC +
Preference number: 6 (lower is better)
Translates to: LKLSVMVLESLREEQ*EVRSRDEGVALGPS
Trigger: GGACGGCCCCAAGGCCACACCCTCGTCCCTGGACCTGACCTCCAACTGCTCTTCACGAAGTGACTCCAAGACCATGACAGAGAGCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp CGATCATGCACACGACTCTGCTGGGCATGGTCTCTGTaGTTGAGTAGTAGCCCTGGGGGAAGGCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: RSCTRLCWAWSL*LSSSPGGRPAG
Trigger: TCCTGCTGGCCTTCCCCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS GCA 72 bp AGCTTCGTATCCAGCTGGAGATTTTTCCTTCTCTTTTaGTGCCGCTGCCGCCGCCTGCAGTTTCGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: SFVSSWRFFLLF*CRCRRLQFRGH
Trigger: GTGCCCGCGAAACTGCAGGCGGCGGCAGCGGCAGCAAAAGAGAAGGAAAAATCTCCAGCTGGATACGAAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 72 bp AACTGGCGCTCAGAATATAAACGCTTCTGGATGCACTaGCCGCCTGCCCGCGGTGGCTCTGAATTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: NWRSEYKRFWMH*PPARGGSEFLH
Trigger: GTGGAGGAATTCAGAGCCACCGCGGGCAGGCGGGCAGTGCATCCAGAAGCGTTTATATTCTGAGCGCCAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp CAAAGCCCTGTGCTGCGTGAGGACTTAGGAGCGAAGTaGGGGCCCATTGCAGCGCGACCTGTAAAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: QSPVLREDLGAK*GPIAARPVKVL
Trigger: CAGAACTTTTACAGGTCGCGCTGCAATGGGCCCCCACTTCGCTCCTAAGTCCTCACGCAGCACAGGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp CTGGCCATTCGATCATGCACACGACTCTGCTGGGCATaGTCTCTGTGGTTGAGTAGTAGCCCTGGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: LAIRSCTRLCWA*SLWLSSSPGGR
Trigger: CCTTCCCCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS CCA 72 bp CTTTGTACACACTGCCCTGGGTCTGGAGATACCGGGTaGATTTCATTTCCAGCCCCTCATAGTCGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: LCTHCPGSGDTG*ISFPAPHSRRR
Trigger: GCGCCGGCGACTATGAGGGGCTGGAAATGAAATCCACCCGGTATCTCCAGACCCAGGGCAGTGTGTACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp GATGCTCTGGCCATTCGATCATGCACACGACTCTGCTaGGCATGGTCTCTGTGGTTGAGTAGTAGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: DALAIRSCTRLC*AWSLWLSSSPG
Trigger: CCCAGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS CCA 72 bp TCCAGGCGGCTGACTTTGTACACACTGCCCTGGGTCTaGAGATACCGGGTGGATTTCATTTCCAGCCCCTCA +
Preference number: 6 (lower is better)
Translates to: SRRLTLYTLPWV*RYRVDFISSPS
Trigger: TGAGGGGCTGGAAATGAAATCCACCCGGTATCTCCAGACCCAGGGCAGTGTGTACAAAGTCAGCCGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp GTGGTCTCCAGGCGGCTGACTTTGTACACACTGCCCTaGGTCTGGAGATACCGGGTGGATTTCATTTCCAGC +
Preference number: 6 (lower is better)
Translates to: VVSRRLTLYTLP*VWRYRVDFISS
Trigger: GCTGGAAATGAAATCCACCCGGTATCTCCAGACCCAGGGCAGTGTGTACAAAGTCAGCCGCCTGGAGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 72 bp TCACTACCACGTTGCCCACCACAGAGGTCACCACAATaGCCGTGTAGGCAGCTGCCCAAAGGACAATTTGCC +
Preference number: 6 (lower is better)
Translates to: SLPRCPPQRSPQ*PCRQLPKGQFA
Trigger: GGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATTGTGGTGACCTCTGTGGTGGGCAACGTGGTAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS TCA 72 bp CAGAGGAGTCCCCGGGGATCTCACTGGCCCATAGTGTaGTTCCCACTACGGTGTATGCATAGCCAATCACCA +
Preference number: 6 (lower is better)
Translates to: QRSPRGSHWPIV*FPLRCMHSQSP
Trigger: TGGTGATTGGCTATGCATACACCGTAGTGGGAATCACACTATGGGCCAGTGAGATCCCCGGGGACTCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS TCA 72 bp GCCCTGTGGCCTAGGAGAGCACATTGGAGGAGAAGCTaGAGCTCTCTGTCATGGTCTTGGAGTCACTTCGTG +
Preference number: 6 (lower is better)
Translates to: ALWPRRAHWRRS*SSLSWSWSHFV
Trigger: CACGAAGTGACTCCAAGACCATGACAGAGAGCTTCAGCTTCTCCTCCAATGTGCTCTCCTAGGCCACAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 72 bp CAAGAGATCCCCCGCATTTATGCACCTGCTGCTGCCTaGAACTCCTATTTCTCCTTCCTCCGCAGGGAAAGG +
Preference number: 6 (lower is better)
Translates to: QEIPRIYAPAAA*NSYFSFLRRER
Trigger: CCTTTCCCTGCGGAGGAAGGAGAAATAGGAGTTGCAGGCAGCAGCAGGTGCATAAATGCGGGGGATCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 72 bp GAAGCAAGAGATCCCCCGCATTTATGCACCTGCTGCTaGCTGCAACTCCTATTTCTCCTTCCTCCGCAGGGA +
Preference number: 6 (lower is better)
Translates to: EARDPPHLCTCC*LQLLFLLPPQG
Trigger: TCCCTGCGGAGGAAGGAGAAATAGGAGTTGCAGGCAGCAGCAGGTGCATAAATGCGGGGGATCTCTTGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS GCA 72 bp CACCACAGAGGTCACCACAATGACCGTGTAGGCAGCTaGCCAAAGGACAATTTGCCAGGCTGGTTGCACGAA +
Preference number: 6 (lower is better)
Translates to: HHRGHHNDRVGS*PKDNLPGWLHE
Trigger: TTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATTGTGGTGACCTCTGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS GCA 72 bp TCGGATGCTCTGGCCATTCGATCATGCACACGACTCTaGTGGGCATGGTCTCTGTGGTTGAGTAGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: SDALAIRSCTRL*WAWSLWLSSSP
Trigger: AGGGCTACTACTCAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS CCA 72 bp CGTGTAGGCAGCTGCCCAAAGGACAATTTGCCAGGCTaGTTGCACGAACTGATTGGGTTCCGAGGTGTTAGT +
Preference number: 6 (lower is better)
Translates to: RVGSCPKDNLPG*LHELIGFRGVS
Trigger: ACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CAA 72 bp GTAGGCAGCTGCCCAAAGGACAATTTGCCAGGCTGGTaGCACGAACTGATTGGGTTCCGAGGTGTTAGTGGA +
Preference number: 6 (lower is better)
Translates to: VGSCPKDNLPGW*HELIGFRGVSG
Trigger: TCCACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CAA 90 bp AGAGGTCACCACAATGACCGTGTAGGCAGCTGCCCAAAGGACAATTaGCCAGGCTGGTTGCACGAACTGATTGGGTTCCGAGGTGTTAGT +
Preference number: 6 (lower is better)
Translates to: RGHHNDRVGSCPKDN*PGWLHELIGFRGVS
Trigger: ACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATTGTGGTGACCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS TCA 72 bp TTCCGAGGTGTTAGTGGAGATGTTTGGGGAGAGGTCTaGGTCCACCGGGAGGACGTTATCCATTTCGAAGCT +
Preference number: 6 (lower is better)
Translates to: FRGVSGDVWGEV*VHREDVIHFEA
Trigger: AGCTTCGAAATGGATAACGTCCTCCCGGTGGACTCAGACCTCTCCCCAAACATCTCCACTAACACCTCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS TCA 72 bp GCCCAAAGGACAATTTGCCAGGCTGGTTGCACGAACTaGTTGGGTTCCGAGGTGTTAGTGGAGATGTTTGGG +
Preference number: 6 (lower is better)
Translates to: AQRTICQAGCTN*LGSEVLVEMFG
Trigger: CCCAAACATCTCCACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CAA 90 bp AATGACCGTGTAGGCAGCTGCCCAAAGGACAATTTGCCAGGCTGGTaGCACGAACTGATTGGGTTCCGAGGTGTTAGTGGAGATGTTTGG +
Preference number: 6 (lower is better)
Translates to: NDRVGSCPKDNLPGW*HELIGFRGVSGDVW
Trigger: CCAAACATCTCCACTAACACCTCGGAACCCAATCAGTTCGTGCAACCAGCCTGGCAAATTGTCCTTTGGGCAGCTGCCTACACGGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS GCA 72 bp CATAAATCTTGTTCGGATGCTCTGGCCATTCGATCATaGACACGACTCTGCTGGGCATGGTCTCTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: HKSCSDALAIRS*TRLCWAWSLWL
Trigger: CAACCACAGAGACCATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000305249.10
ENST00000409848.3
ENST00000497764.1
CDS CCA 72 bp CTTCTAAAGCCAGACAGGAGGGTGGAAGGCTTTTTCTaGGCAGCACTCTTTTTGAAAGCTGAACTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: LLKPDRRVEGFF*AALFLKAELAL
Trigger: GAGCGCCAGTTCAGCTTTCAAAAAGAGTGCTGCCCAGAAAAAGCCTTCCACCCTCCTGTCTGGCTTTAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CAA 72 bp ACATTGGAGGAGAAGCTGAAGCTCTCTGTCATGGTCTaGGAGTCACTTCGTGAAGAGCAGTTGGAGGTCAGG +
Preference number: 6 (lower is better)
Translates to: TLEEKLKLSVMV*ESLREEQLEVR
Trigger: CCTGACCTCCAACTGCTCTTCACGAAGTGACTCCAAGACCATGACAGAGAGCTTCAGCTTCTCCTCCAATGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS TCA 72 bp AGTTCGTCACTGTCCTCATTCTTTTGTGGGCTAAGATaGTCCACATCACTACCACGTTGCCCACCACAGAGG +
Preference number: 6 (lower is better)
Translates to: SSSLSSFFCGLR*STSLPRCPPQR
Trigger: CCTCTGTGGTGGGCAACGTGGTAGTGATGTGGATCATCTTAGCCCACAAAAGAATGAGGACAGTGACGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CCA 72 bp CGACCTGTAAAAGTTCTGAGCCTATGGCCAGGATTCTaGAGCTTCGTATCCAGCTGGAGATTTTTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: RPVKVLSLWPGF*SFVSSWRFFLL
Trigger: GAGAAGGAAAAATCTCCAGCTGGATACGAAGCTCCAGAATCCTGGCCATAGGCTCAGAACTTTTACAGGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000305249.10
CDS CCA 72 bp GTGGTACACTTTCTCATAAATCTTGTTCGGATGCTCTaGCCATTCGATCATGCACACGACTCTGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: VVHFLINLVRML*PFDHAHDSAGH
Trigger: ATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTGTACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CCA 72 bp GTAGACCTGCTGGATAAACTTCTTCAGGTAGAGATCTaGGTTGATGTAGGGCAGGAGGAAGAAGATGTGGAA +
Preference number: 6 (lower is better)
Translates to: VDLLDKLLQVEI*VDVGQEEEDVE
Trigger: TTCCACATCTTCTTCCTCCTGCCCTACATCAACCCAGATCTCTACCTGAAGAAGTTTATCCAGCAGGTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000305249.10
ENST00000409848.3
CDS CCA 72 bp GTTTCATACTTTCTCATAAATCTTGTTCGGATGCTCTaGCCATTCGATCATGCACACGACTCTGCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: VSYFLINLVRML*PFDHAHDSAGH
Trigger: ATGCCCAGCAGAGTCGTGTGCATGATCGAATGGCCAGAGCATCCGAACAAGATTTATGAGAAAGTATGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497764.1